Escherichia coli CF 1702 is a human pathogen that has multiple antibiotic resistances and was isolated from urine of a patient with urinary tract catheter.
antibiotic resistance human pathogen Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 16275 | LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) | Medium recipe at MediaDive | Name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) Composition: Agar 20.0 g/l NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l Distilled water | ||
| 16275 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 39714 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) |
| Test 1 | Test 2 | |
|---|---|---|
| @ref | 16275 | 16275 |
| Medium | Mueller-Hinton Agar | Müller-Hinton Agar |
| Manual annotation | 1 | 1 |
| Inhibition zone diameter in mm | Inhibition zone diameter in mm | |
| Amikacin 30µg (disc) | 24 | 24 |
| Ampicillin 10µg (disc) | 0 | 0 |
| Aztreonam 30µg (disc) | 10 | 8 |
| Bacitracin 10Unit | 0 | n.d. |
| Cefalotin 30µg (disc) | 20 | n.d. |
| Cefazolin 30µg (disc) | 24 | n.d. |
| Cefiderocol 30µg (disc) | n.d. | 20 |
| Cefotaxime 30µg (disc) | 32-34 | 34 |
| Ceftazidime 10µg (disc) | n.d. | 0 |
| Ceftriaxone 30µg (disc) | 28 | 26 |
| Chloramphenicol 30µg (disc) | 26-28 | 26-28 |
| Ciprofloxacin 5µg (disc) | n.d. | 44-46 |
| Clindamycin 10µg (disc) | 0 | 0 |
| Colistin 10µg (disc) | 14-16 | n.d. |
| Colistin sulphate 10µg (disc) | n.d. | 16 |
| Doxycycline 30µg (disc) | 20 | n.d. |
| Erythromycin 15µg (disc) | 8 | 10 |
| Fosfomycin 50µg (disc) | 34 | 28 |
| Gentamicin 30µg (disc) | n.d. | 26 |
| Gentamycin 10µg (disc) | n.d. | |
| Imipenem 10µg (disc) | 36 | 36-38 |
| Kanamycin 30µg (disc) | 36-38 | 22 |
| Levofloxacin 5µg (disc) | n.d. | 40-42 |
| Lincomycin 15µg (disc) | 0 | n.d. |
| Linezolid 10µg (disc) | 0 | 0 |
| Meropenem 10µg (disc) | n.d. | 38-40 |
| Mezlocillin 30µg (disc) | 10 | n.d. |
| Moxifloxacin 5µg (disc) | 36-38 | 40 |
| Neomycin 30µg (disc) | 20 | n.d. |
| Nitrofurantoin 100µg (disc) | 24 | 24 |
| Norfloxacin 10µg (disc) | 40 | n.d. |
| Nystatin 100Unit | 0 | n.d. |
| Ofloxacin 5µg (disc) | 34-36 | 38 |
| Oxacillin 5µg (disc) | 0 | 0 |
| Penicillin G 6µg (disc) | 0 | 0 |
| Pipemidic acid 20µg (disc) | 30 | n.d. |
| Piperacillin/Tazobactam 40µg (disc) | 26 | n.d. |
| Piperacillin/Tazobactam 110µg (disc) | n.d. | 30 |
| Polymyxin B 300Unit | 16 | 18 |
| Quinupristin/Dalfopristin 15µg (disc) | 0 | 0 |
| Rifampicin 5µg (disc) | n.d. | 10 |
| Teicoplanin 30µg (disc) | 0 | 0 |
| Tetracycline 30µg (disc) | 26 | 28-30 |
| Ticarcillin 75µg (disc) | 0 | 0 |
| Tigecycline 15µg (disc) | n.d. | 30 |
| Trimethoprim-sulfamethoxazole (1:19) 10µg (disc) | n.d. | 0 |
| Vancomycin 30µg (disc) | 0 | 0 |
| 16275 | ObservationESBL |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | - | fermentation | from API 20E |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 68368 | 28053 ChEBI | melibiose | + | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68368 | 30911 ChEBI | sorbitol | - | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | ChEBI | Metabolite | Is resistant | Resistance conc. | |
|---|---|---|---|---|---|
| 16275 | 28971 | Ampicillin | 10 µg (disc) | from Antibiotic test | |
| 16275 | 28669 | Bacitracin | 10 Unit | from Antibiotic test | |
| 16275 | 3508 | Ceftazidime | 10 µg (disc) | from Antibiotic test | |
| 16275 | 3745 | Clindamycin | 10 µg (disc) | from Antibiotic test | |
| 16275 | 6472 | Lincomycin | 15 µg (disc) | from Antibiotic test | |
| 16275 | 63607 | Linezolid | 10 µg (disc) | from Antibiotic test | |
| 16275 | 7660 | Nystatin | 100 Unit | from Antibiotic test | |
| 16275 | 7809 | Oxacillin | 5 µg (disc) | from Antibiotic test | |
| 16275 | 18208 | Penicillin G | 6 µg (disc) | from Antibiotic test | |
| 16275 | Quinupristin/Dalfopristin | 15 µg (disc) | from Antibiotic test | ||
| 16275 | 29687 | Teicoplanin | 30 µg (disc) | from Antibiotic test | |
| 16275 | 9587 | Ticarcillin | 75 µg (disc) | from Antibiotic test | |
| 16275 | Trimethoprim-sulfamethoxazole (1:19) | 10 µg (disc) | from Antibiotic test | ||
| 16275 | 28001 | Vancomycin | 30 µg (disc) | from Antibiotic test |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68368 | gelatinase | - | from API 20E | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16275 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | - | - | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Infection | #Medical device | #Catheter | |
| #Infection | #Patient | - | |
| #Host Body-Site | #Urogenital tract | - | |
| #Host Body Product | #Fluids | #Urine |
| @ref | Sample type | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|
| 16275 | urine of a patient with urinary tract catheter | France | FRA | Europe |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
| The interactive effects of medicinal dyes with conventional antimicrobials against skin pathogens. | Ramfol R, van Vuuren S. | J Appl Microbiol | 10.1093/jambio/lxae147 | 2024 | |
| Recombinant Reporter Phage rTUN1::nLuc Enables Rapid Detection and Real-Time Antibiotic Susceptibility Testing of Klebsiella pneumoniae K64 Strains. | Braun P, Raab R, Bugert JJ, Braun S. | ACS Sens | 10.1021/acssensors.2c01822 | 2023 | |
| A qPCR and multiplex pyrosequencing assay combined with automated data processing for rapid and unambiguous detection of ESBL-producers Enterobacteriaceae. | Deccache Y, Irenge LM, Ambroise J, Savov E, Marinescu D, Chirimwami RB, Gala JL. | AMB Express | 10.1186/s13568-015-0136-1 | 2015 |
| #16275 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22314 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #39714 | ; Curators of the CIP; |
| #68368 | Automatically annotated from API 20E . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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