Escherichia coli (DSM 30083, ATCC 11775, CCM 5172)

Name: Escherichia coli (DSM 30083, ATCC 11775, CCM 5172)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 4907

Type strain

Strain Designation U5/41, U 5/41

Culture col. no. DSM 30083 ATCC 11775 CCM 5172 CIP 54.8 IAM 12119 18 more

NCBI tax ID(s) 866789 562

Special Collections DSMZ CCUG JCM KCTC CIP UCCCB

History <- ATCC; ATCC 11775 <- NCTC; NCTC 9001 <- F. Kauffman; U5/41 Y. Kosako 82039 <-- R. Sakazaki <-- ATCC 11775 <-- NCTC 9001 <-- F. Kauffmann U 5/41. ATCC <- NCTC <- F. Kauffmann, U5/41 CIP <- 1954, NCTC <- 1952, F. Kauffmann, Copenhagen, Denmark: strain U 5/41

Links

Escherichia coli U5/41 is a facultative anaerobe, Gram-negative, motile human pathogen that has multiple antibiotic resistances and was isolated from urine.

antibiotic resistance Gram-negative motile rod-shaped facultative anaerobe human pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 14277

LMG 2092,ATCC 11775,CCM 5172,CCUG 24,CECT 515,IAM 12119,JCM 1649,NCDO 1989,NCIB 11943,PCM 321,PCM 172,CCUG 29300,CCRC 10675,NCIMB 11943,CIP 54.8,LMD 54.8,NCFB 1989,KCTC 2441,NCCB 54008,BCRC 10675,CCT 0547,CCT 1357,NBIMCC 3398,NCAIM B.01874,CDBB 964,ACM 1803,ICMP 15663,CNCTC 6859,CGMCC 1.2389,CGMCC 1.2993,NCTC 9001,NBRC 102203,VTT E-94564,DSM 30083

@ref 20215

Last LPSN update 2026-02-09 11:18:50

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Escherichia

Species Escherichia coli

Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)

Synonyms (1)

"Bacillus coli"

BacDive ID	Other strains from **Escherichia coli** (1883)	Type strain
4409	E. coli DSM 301, ATCC 4157, CIP 61.11, NCIB 86, NCTC ...
4410	E. coli B3, B subscript 3 (thy -), DSM 308, IMG 1728
4411	E. coli K12 Hfr H61 lambdas (lambda+), 2170, Hfr ...
4412	E. coli K12 C600', 2176, C600', Pons 2176, DSM 426
4413	E. coli K12 C600''1699, C600''1699, K12 C600'', DSM ...
4414	E. coli K12, K12 'wildtype', K12 wildtype, DSM 498, ...
4415	E. coli B, DSM 499, ATCC 23226, IMG 1702
4416	E. coli B/r, DSM 500, ATCC 23227, IMG 1709
4417	E. coli Bs-1, DSM 501, ATCC 23224
4418	E. coli x-39, DSM 502, IMG 1719
4419	E. coli B, B (Luria), DSM 613, ATCC 11303, CCUG 2468, ...
4420	E. coli MacLeod, McLeod, CCUG 3274, DSM 682, ATCC ...
4421	E. coli ML 3, ML3, DSM 1058, ATCC 15223, NCIB 9552, ...
4422	E. coli DSM 787, ATCC 11229, CCUG 17931, AMC 198, ...
4423	E. coli ML 30, ML30, DSM 1328
4424	E. coli ML 308, ML308, DSM 1329
4425	E. coli 343/113, K12 343/113, K12 strain 343/113, ...
4426	E. coli DSM 1099
4427	E. coli Seattle 1946, DSM 1103, ATCC 25922, NCIB ...
4428	E. coli W, CCUG 1640, DSM 1116, ATCC 9637, CCM 2024, ...
4429	E. coli K12 S605, DSM 1936
4430	E. coli K12 KG93Wt F SmAr, K12 KG93 Wt F SmAr, K12 ...
4431	E. coli W1034 GY767 Hfr Sms, GY 767 Hfr Sms, W 1034, ...
4432	E. coli AB1157 derivative, W 1022, W1022, W1022 AB1157, ...
4433	E. coli Crooks, Crookes, DSM 1576, ATCC 8739, NCIB ...
4434	E. coli K12 HB101, HB101, DSM 1607, CIP 102400, ATCC ...
4435	E. coli 113-3, 113-3 Davis, DSM 1900, ATCC 11105, ...
4436	E. coli K12 M5004, M5004, DSM 2304
4437	E. coli K12 JM103, JM103, DSM 2829, ATCC 39403, NCIB ...
4438	E. coli 159-2, DSM 2607, NCIB 8743
4439	E. coli K12 WM 298, WM 298, DSM 2670
4440	E. coli 154-59 L, DSM 2769, ATCC 12651
4441	E. coli B, DSM 2840
4442	E. coli pUC13, JM103, K12 JM103 deltalac pro supE ...
4443	E. coli BMH71-18, K12 BMH71-18, DSM 3413
4444	E. coli pUR278, BMH71-18, K12 BMH71-18, DSM 3414
4445	E. coli pUR288, BMH71-18, K12 BMH71-18, DSM 3415
4446	E. coli pUR289, BMH71-18, K12 BMH71-18, DSM 3416
4447	E. coli pUR290, BMH71-18, K12 BMH71-18, DSM 3417
4448	E. coli pUR291, BMH71-18, K12 BMH71-18, DSM 3418
4449	E. coli pUR292, BMH71-18, K12 BMH71-18, DSM 3419
4450	E. coli pUC8, JM83, K12 JM83 ara Delta(lac-proAB) ...
4451	E. coli pUC9, JM83, K12 JM83 ara Delta(lac-proAB) ...
4452	E. coli pUC12, JM103, K12 JM103 deltalacpro supE ...
4453	E. coli K12 JM109, JM109, DSM 3423
4454	E. coli pUC18, JM109, K12 JM109 recA1 endA1 gyr96A ...
4455	E. coli pUC19, JM109, K12 JM109 recA1 endA1 gyr96A ...
4456	E. coli K12 chi 1776, chi 1776, DSM 3804, ATCC 31244, ...
4458	E. coli AB2463, K12 AB2463, DSM 3864, NCIB 12206, ...
4459	E. coli pBR325, HB101, DSM 3865, NCIB 11866
4460	E. coli pJC74, 5K, 5K (C600, hsdR), DSM 3866, NCIB ...
4461	E. coli R300B, K12 W3110 thy-, W3110, DSM 3871, NCTC ...
4462	E. coli ColE1::Tn7, J62, K12 J62, DSM 3872, NCTC ...
4463	E. coli RP4, J53, K12 J53, CCUG 21642, DSM 3876, ...
4464	E. coli ColE1, JC411, DSM 3877
4465	E. coli RSF2124, C600, DSM 3878
4466	E. coli pBR322, SK 1592, DSM 3879
4467	E. coli R1drd19, J53, K12 J53, DSM 3880, NCTC 50003
4468	E. coli MRE-600, DSM 3901, ATCC 29417, CGSC 5260, ...
4469	E. coli K12 C600 CR34, C600 CR34, CR34, K12 C600, ...
4470	E. coli pKH80, HB101, DSM 3926, ATCC 37093
4471	E. coli pNO1517, MC1009, DSM 3927, ATCC 37094
4472	E. coli pRK290, HB101, DSM 3928, ATCC 37168
4473	E. coli pBRN3, K12 SK2284(endA hsdR pnp sbcB), DSM ...
4474	E. coli K12 JM83, JM83, DSM 3947
4475	E. coli K12 JM101, JM101, DSM 3948, ATCC 33876, NCIB ...
4476	E. coli K12 JM105, JM105, DSM 3949
4477	E. coli K12 JM107, JM107, DSM 3950
4478	E. coli pJP3, JMP396, K12 JMP396 Rifr Nalr, DSM 4061
4479	E. coli pJP4, JMP397, K12 JMP397 Rifr Nalr, DSM 4062
4480	E. coli pJP5, JMP 398, K12 JMP398 Rifr Nalr, DSM ...
4481	E. coli pJP7, JMP 399, K12 JMP399 Rifr Nalr, DSM ...
4482	E. coli pACYC184, K12 PM191 (thr-1 leu-6 supE44 lacY1 ...
4483	E. coli K12 LE392, DSM 4230, LE 392, UCCCB114
4484	E. coli K12 DH1, DH1, DSM 4235, ATCC 33849, NCIB ...
4485	E. coli R7K, J53-2, K12 J53-2, DSM 4244, NCTC 50006
4486	E. coli R6K, J53, K12 J53, DSM 4245, NCTC 50005, ...
4487	E. coli TP114, J53-2, K12 J53-2, DSM 4246, NCTC 50085
4488	E. coli R702, J53-2, K12 J53-2, DSM 4247, NCTC 50047, ...
4489	E. coli R446b, J53, K12 J53, DSM 4248, NCTC 50032
4490	E. coli DSM 4261, ATCC 10799, CCM 2260, NCIB 8134, ...
4491	E. coli K12 RR28, RR28, DSM 4415, ATCC 35111
4492	E. coli pHE3, RR28, DSM 4416, ATCC 37161
4494	E. coli pBS232, DSM 4676
4495	E. coli pBS234, DSM 4677
4496	E. coli DSM 4679, PMC pMC231
4497	E. coli DSM 4509, WA 321
4498	E. coli pAR17, DSM 4547
4499	E. coli pAR28, DSM 4548
4500	E. coli pOS1, DSM 4748
4501	E. coli pB18, DSM 4754
4502	E. coli K12 5K, 5K, DSM 4760, NCIB 11669
4503	E. coli pDM2, DSM 4856
4504	E. coli pHC79-2cos/tk, DSM 4857
4505	E. coli K12 KLF48/KL159, KLF48/KL159, DSM 4858, CGSC ...
4506	E. coli K12 RR1, RR1, DSM 4859, ATCC 31343, NCIB ...
4507	E. coli C, DSM 4860, ATCC 13706, NCIB 10544, CCUG ...
4508	E. coli pNF2, DSM 4862, ATCC 37187
4509	E. coli pNF3, DSM 4863, ATCC 37188
4510	E. coli pSW1, DSM 4599
4511	E. coli pHV33, DSM 4605
4512	E. coli pJH101, DSM 4606
4513	E. coli pMK4, DSM 4607
4515	E. coli K12 JA300, DSM 4776, ATCC 33588, NCIB 12220
4516	E. coli O55:K59(B5):H, DSM 4779, ATCC 12014, NCTC ...
4517	E. coli pPM2, DSM 4792
4518	E. coli pP1100, DSM 4793
4519	E. coli pRU666, DSM 4971, NCTC 50232
4520	E. coli pRU671, DSM 4972, NCTC 50233
4521	E. coli pHS1, DSM 4825
4522	E. coli YEp13, DSM 4887
4523	E. coli pDH51, DSM 4899
4524	E. coli pYe(CEN3)41, DSM 4932
4525	E. coli pGT12, DSM 4933
4526	E. coli pRU668, DSM 4960
4527	E. coli pRU669, DSM 4961
4528	E. coli pRU670, DSM 4962
4529	E. coli pRU663, DSM 4963
4530	E. coli pRU664, DSM 4964
4531	E. coli pRU672, DSM 4965
4532	E. coli pJOE100, DSM 4966
4533	E. coli pJOE105, DSM 4967, NCTC 50230
4534	E. coli pJOE106, DSM 4968
4535	E. coli pRU667, DSM 4969, NCTC 50234
4536	E. coli pRU738, DSM 4970, NCTC 50235
4537	E. coli pPUC29, DSM 5149
4538	E. coli pKC7, DSM 5163, ATCC 37084, NCIB 12389
4539	E. coli pNJ5000, DSM 5164
4540	E. coli pME9, DSM 5165
4541	E. coli pME12::Tn5-259, DSM 5166
4542	E. coli pSUP5011::Tn5-mob, DSM 5167
4543	E. coli R388, DSM 5189, NCTC 50023
4544	E. coli K12 MM294, MM294, DSM 5208, ATCC 33625
4545	E. coli K12 JA221, JA221, DSM 5209, ATCC 33875
4546	E. coli Hfr 3000 U 432, DSM 5210, ATCC 23631, NCIMB ...
4547	E. coli O78:K80:H-, DSM 5212, NCTC 9078, CCUG 11380
4548	E. coli pWH5, DSM 5313
4549	E. coli K12 AB1133 (P109), AB1133 (P109), DSM 5343
4550	E. coli K12 P234, P234, DSM 5344
4551	E. coli K12 P651, P651, DSM 5345
4552	E. coli K12 DH1 (E381), DH1 (E381), DSM 5346
4553	E. coli K12 E851, E851, DSM 5347
4554	E. coli CSH 39, DSM 5543, HER 1290
4555	E. coli RSF1010, DSM 5401, NCIMB 11947
4556	E. coli K12 BHB 2688, BHB 2688, DSM 5451, ATCC 35131
4557	E. coli K12 BHB 2690, BHB 2690, DSM 5452, ATCC 35132
4558	E. coli pOT153, DSM 5584
4559	E. coli K12 JM108, JM108, DSM 5585
4560	E. coli pACYC177, PC-V3009, DSM 5587
4561	E. coli pBR327, PC-V3020, DSM 5588
4562	E. coli pBR328, PC-V3021, DSM 5589
4563	E. coli pBR329, PC-V3022, DSM 5590
4564	E. coli PC-V3027, pMB9, DSM 5591
4565	E. coli PC-V3044, pJB8, DSM 5592
4566	E. coli PC-V3069, pMOB45, DSM 5593
4567	E. coli PC-V3097, pKT210, DSM 5594
4568	E. coli PC-V3098, pKT230, DSM 5595
4569	E. coli PC-V3099, pKT231, DSM 5596
4570	E. coli PC-V3100, pKT248, DSM 5597
4571	E. coli PC-V3113, pKT247, DSM 5598
4572	E. coli PC-V3125, pRK2013, DSM 5599
4573	E. coli Lederberg W1485, W1485, DSM 5695, ATCC 12435, ...
4574	E. coli K12, DSM 5698, ATCC 25404, NCIMB 11290
4575	E. coli pWL102, DSM 5717
4576	E. coli QST 40139, DSM 5802
4577	E. coli 40, DSM 5829, HER 1252
4578	E. coli K12 W3110, W3110, DSM 5911, ATCC 27325
4579	E. coli K12 K802, K802, DSM 5912, ATCC 33526, CGSC ...
4580	E. coli K12 K38, DSM 5913, ATCC 35049
4581	E. coli pBR313, DSM 5914, ATCC 37018, NRRL B-14220
4582	E. coli pXf3, DSM 5915, ATCC 37132
4583	E. coli pSP64-fl-, DSM 5916, ATCC 37361
4584	E. coli pSP64-fl+, DSM 5917, ATCC 37362
4585	E. coli SK 1592, K12 SK 1592, DSM 5922, ATCC 35106
4586	E. coli F.S. Barr 1532, 1532, DSM 5923, ATCC 35218, ...
4587	E. coli DSM 5929, ATCC 37195, PMC pMC9
4588	E. coli DSM 5930, ATCC 37196, PMC pMC9
4589	E. coli pGA437, DSM 5931, ATCC 37350
4590	E. coli K12 HMS174, HMS174, DSM 5932, ATCC 47011
4591	E. coli K12 BNN102 (C600hflA), BNN102, K12 BNN102 ...
4592	E. coli pBGS8, PC-V3012, DSM 5993
4593	E. coli pBluescribe M13+, PC-V3045, DSM 5994
4594	E. coli PC-V3057, pGEM-3Zf(+), DSM 5995
4595	E. coli PC-V3058, pGEM-3Zf(-), DSM 5996
4596	E. coli PC-V3138, pYAC3, DSM 5997
4597	E. coli pBluescribe M13-, PC-V3046, DSM 5999
4598	E. coli K12 TG1, TG1, DSM 6056
4599	E. coli pSP65, DSM 6183, CCRC 41498
4600	E. coli YIp5, DSM 6184, ATCC 37061, CCRC 41529
4601	E. coli YEp24, DSM 6185, ATCC 37051, CCRC 41112
4603	E. coli DP50, DSM 6188, CCRC 51494
4604	E. coli YIP33, DSM 6189, ATCC 37064, CCRC 41300
4605	E. coli K12 Q358, Q358, DSM 6196, ATCC 47018
4606	E. coli K12 Q359, Q359, DSM 6197, ATCC 47019
4607	E. coli K12 HB101 DB6507, DB6507, FD 27747, HB101 ...
4608	E. coli pSC101, DSM 6202, ATCC 37032
4609	E. coli pfdA2, DSM 6212, ATCC 37375
4610	E. coli pHB-1, DSM 6213, ATCC 41036
4611	E. coli K12 MC1000, MC1000, DSM 6214, ATCC 39531
4612	E. coli pfdB2, DSM 6215, ATCC 37371
4613	E. coli DSM 6219, ATCC 37197, PMC pMC9
4614	E. coli K12 CSH36, CSH 36, DSM 6253
4615	E. coli K12 L17, L17, DSM 6254
4616	E. coli K12 LEK12, LEK12, Stanford, DSM 6255
4617	E. coli K12 LEK12 (P1 Cm ts), LEK12 (P1 Cm ts), DSM ...
4618	E. coli C (P1 Cm ts), DSM 6257
4619	E. coli DP50supF58, DSM 6277, ATCC 39061
4620	E. coli K12 W3100, W3100, DSM 6302, ATCC 14948
4621	E. coli K12 MC1009, MC1009, DSM 6304, ATCC 33760
4622	E. coli pLAFR1, DSM 6305, ATCC 37167
4623	E. coli K12 LE392 (P1 Cm ts), LE392 (P1 Cm ts), DSM ...
4624	E. coli K12 MC4100, MC4100, DSM 6574, ATCC 35695
4625	E. coli K12 DC625, DC625, DSM 6721
4626	E. coli K12 NAR 30, NAR 30, DSM 6722
4627	E. coli DSM 6850, PoM pOM1
4628	E. coli DSM 6851, PoM pOM2
4629	E. coli DSM 6852, PoM pOM3
4630	E. coli DSM 6853, PoM pOM4
4631	E. coli DSM 6854, PoM pOM8
4632	E. coli DSM 6855, PoM pOM9
4633	E. coli pUC830, DSM 6856
4634	E. coli pUC931, DSM 6857
4635	E. coli pAG0, DSM 6893, NCIMB 12271
4636	E. coli pAG60, DSM 6894, NCIMB 12272
4637	E. coli DSM 6895, ATCC 37176, NCIMB 12384, PCM pCM1
4638	E. coli DSM 6896, ATCC 37174, NCIMB 12263, PCM pCM4
4639	E. coli K12 DH5alpha, DH5alpha, DSM 6897, CCRC 51731
4640	E. coli K12 MC1061p3, DSM 7123, ATCC 47035
4641	E. coli 112-12, DSM 6966, CIP 54.119, NCIB 10086, ...
4642	E. coli K12 W-677, W-677, W677 F+, DSM 6967, CIP ...
4643	E. coli W678F-, W678F^-, DSM 6968, CIP ...
4644	E. coli BM2001, BM2001, pIP173, DSM 6969, CIP 79.43, ...
4645	E. coli pSRW25, DSM 7023, ATCC 37506, CCRC 41181
4646	E. coli pGH101, DSM 7024, ATCC 37480, CCRC 41182
4647	E. coli pHG165, DSM 7025, ATCC 37618, CCRC 41132
4648	E. coli pPR111, DSM 7026, ATCC 37492, CCRC 41179
4649	E. coli DSM 7117, CGSC 4980
4650	E. coli DSM 7118, CGSC 5401
4651	E. coli MC1061, DSM 7140, ATCC 53338
4652	E. coli pVK100, K12 HB101 (pVK100), DSM 7141, ATCC ...
4653	E. coli pVK102, K12 HB101 (pVK102), DSM 7142, ATCC ...
4654	E. coli pUCD5, K12 HB101 (pUCD5), DSM 7143, ATCC ...
4655	E. coli K12 AB1621, DSM 7144, ATCC 25290
4656	E. coli K12 POP2136, POP2136, DSM 7367, ATCC 47049
4657	E. coli DSM 7368, ATCC 47009
4658	E. coli DSM 7369, ATCC 47010
4659	E. coli Hfr D, K12 Hfr D, DSM 8226, ATCC 15669, NCIMB ...
4660	E. coli DS410, DS825, K12 DS825, DSM 8539
4661	E. coli K12 TK401, DSM 8346, CGSC 4838
4662	E. coli K12 FRAG-5, DSM 8347, CGSC 4832
4663	E. coli K12 TK121, DSM 8348, CGSC 4835
4664	E. coli K12 MA150, DSM 8349, CGSC 6805
4665	E. coli K12 MA156, DSM 8350, CGSC 6881
4666	E. coli EHEC O157:H7, O157:H7 (EHEC), DSM 8579, NRZEC ...
4667	E. coli K12 chi925, chi925, DSM 8585
4668	E. coli K12 chi1274, DSM 8586
4669	E. coli K12 chi1411, DSM 8587
4670	E. coli K12 chi1849, DSM 8588
4671	E. coli DSM 8589, ATCC 23740
4672	E. coli AM, DSM 8590
4673	E. coli 1O3, DSM 8591
4674	E. coli HB101, DSM 8655, NCIMB 12497, Pet pET2411
4675	E. coli pHC79, C600SF8, SF8(C600r-m-recBC), DSM 8656, ...
4676	E. coli pKB158, 294, DSM 8657, NCIMB 11918, NCIMB ...
4677	E. coli pEA300, HB101, DSM 8670, NCIMB 12207
4678	E. coli F41, DSM 8695
4679	E. coli Aberdeen 1064, DSM 8696
4680	E. coli Stoke W, DSM 8698
4681	E. coli C881-62, DSM 8699
4682	E. coli Canioni, DSM 8700
4683	E. coli E611, DSM 8701
4684	E. coli 4932-53, DSM 8702
4685	E. coli Cigleris, DSM 8703
4686	E. coli E2808, DSM 8710
4687	E. coli EW2129-54, DSM 8711
4688	E. coli pBS42, DSM 8748, BGSC ECE I0 MM 294 (p ßS42), ...
4689	E. coli pTRP-H3, DSM 8749, BGSC ECE II MM 294 (pTRP-H3), ...
4690	E. coli DSM 8772, BGSC ECE 19 BNN 45 (pCP 115), BGSC ...
4691	E. coli C771, DSM 9024
4692	E. coli Kattwijk, DSM 9025
4693	E. coli SU4338-41, DSM 9026
4694	E. coli Guanabara, DSM 9027
4695	E. coli 4608-58, DSM 9028
4696	E. coli 1624-56, DSM 9029
4697	E. coli 1184-68, DSM 9030
4698	E. coli EW227, DSM 9031
4699	E. coli 1111-55, DSM 9032
4700	E. coli E10702, DSM 9033
4701	E. coli DRL145-46, DSM 9034
4702	E. coli AB1157, DSM 9036, CGSC 1157
4703	E. coli DSM 9037, CGSC 4401, CIP 109774
4704	E. coli DSM 9042, CGSC 7231
4705	E. coli pGEc48, GEc137, K12 GEc137, DSM 8819
4706	E. coli pGEc228, GEc137, K12 GEc137, DSM 8820
4707	E. coli pGEc41, GEc137, K12 GEc137, DSM 8829
4708	E. coli pGEc47, GEc137, K12 GEc137, DSM 8830
4709	E. coli Bin19, HB101, pBIN 19, DSM 8870, ATCC 37327
4710	E. coli MC1061, pC22, DSM 8871, ATCC 37493
4711	E. coli pVA517A through H, pVA517A, V517, DSM 8872, ...
4712	E. coli JM107 MA2, DSM 8873, ATCC 47021
4713	E. coli K12 DK8, DSM 8874, ATCC 47038
4714	E. coli K12 DK1, DSM 8875, ATCC 35691
4715	E. coli MM294, pKT280, DSM 8876, ATCC 37036
4716	E. coli K12 NM538, DSM 8877, ATCC 35638
4717	E. coli pAK1003, DSM 8878, ATCC 37425
4718	E. coli S17-1, DSM 9079
4719	E. coli DSM 9144, CGSC 6830, SG 20252
4720	E. coli WP2, DSM 9494, ATCC 49980, CECT 7326, NCIMB ...
4721	E. coli WP2 uvrA, DSM 9495, ATCC 49979, NCIMB 11188, ...
4722	E. coli pKM101, DSM 9496, NCIMB 11702
4723	E. coli pKM101, DSM 9497, NCIMB 11703
4724	E. coli K12 chi2990, DSM 9525
4725	E. coli RP4-2, K12 chi6149, DSM 9526
4726	E. coli PC 1513, DSM 9850
4727	E. coli pCJ105, PC 2970, PC 2970 CJ236 K12 (pC 105), ...
4728	E. coli pLB1, K12 HB101 (pLB1), DSM 10136, ATCC 37393
4729	E. coli pLB3A, K12 HB101 (pLB3A), DSM 10137, ATCC ...
4730	E. coli pSC101-trp.I15, K12 W3110 derivative (pSC101-trp.I15), ...
4731	E. coli pLC4-14, K12 RG100 (pLC4-14), DSM 10197, ...
4732	E. coli K12 30SO, DSM 10198, CGSC 5240
4733	E. coli K12 3300, DSM 10199, CGSC 808
4734	E. coli K12 M7044, DSM 10200, CGSC 6377
4735	E. coli DSM 10232, ATCC 128, NCIMB 8020, PCI 1635, ...
4736	E. coli DSM 10233, NCDO 745, NCIMB 8277, NCTC 8196
4737	E. coli Bacdive 4737, Stoke W, DSM 10234, NCIMB 13058, ...
4738	E. coli K12 DH5, DSM 10235, ATCC 53868, NCIMB 13174
4739	E. coli K13, DSM 10290, ATCC 15766, NCIB 12413
4740	E. coli DSM 10498
4741	E. coli K12 WK 6lambda, DSM 10499
4742	E. coli K12 WK 6lambda mutS, K12 WK 6lambda mutS, ...
4743	E. coli K12 CSH26DeltaF6, DSM 10513, NCTC 50440
4744	E. coli K12 UB5209, DSM 10514, NCTC 50277
4745	E. coli K12 CSR603, DSM 10515, NCTC 50439
4746	E. coli K12 UB1637, DSM 10516, NCTC 50276
4747	E. coli K12 W3110 thy, K12 W3110 thy, DSM ...
4748	E. coli pAYC32, DSM 10618, VKPM B-4846
4749	E. coli Bay14), DSM 10650, ICB 4004 ("Neumann", ICB ...
4750	E. coli A297, DSM 10802
4751	E. coli A299, DSM 10803
4752	E. coli A293, DSM 10804
4753	E. coli IHE3109, DSM 10805
4754	E. coli IHE3036, DSM 10806
4755	E. coli Z36, DSM 10807
4756	E. coli T111, DSM 10808
4757	E. coli 780141M, DSM 10809
4758	E. coli T100, DSM 10810
4759	E. coli C88, DSM 10811
4760	E. coli M128/1-2, DSM 10812
4761	E. coli A298, DSM 10813
4762	E. coli A296, DSM 10814
4763	E. coli A295, DSM 10815
4764	E. coli E8112/77, DSM 10816
4765	E. coli E8111/77, DSM 10817
4766	E. coli E7507/77, DSM 10818
4767	E. coli E4199/76, DSM 10819
4768	E. coli E81/74, DSM 10820
4769	E. coli E9854/78, DSM 10821
4770	E. coli GXIV, DSM 10822
4771	E. coli M170/1-3, DSM 10823
4772	E. coli U16, DSM 10824
4773	E. coli IHE3058, DSM 10825
4774	E. coli IHE3059, DSM 10826
4775	E. coli IHE3107, DSM 10827
4776	E. coli IHE3108, DSM 10828
4777	E. coli IHE3057, DSM 10829
4778	E. coli S13, A192, DSM 10719
4779	E. coli IHE3035, DSM 10720
4780	E. coli IHE3120, DSM 10722
4781	E. coli IHE3033, DSM 10723
4782	E. coli A302a, DSM 10724
4783	E. coli M185/1-1, DSM 10725
4784	E. coli B185/29-10, DSM 10726
4785	E. coli C352-78, DSM 10727
4786	E. coli M70/1-1, DSM 10728
4787	E. coli A270, DSM 10729
4788	E. coli A262, DSM 10730
4789	E. coli F5, DSM 10731
4790	E. coli DI, DSM 10732
4791	E. coli M95/2-1, DSM 10733
4792	E. coli M152/1-1, DSM 10734
4793	E. coli B120/20-1, DSM 10735
4794	E. coli M12/1-4, DSM 10736
4795	E. coli 7R/1-1, DSM 10737
4796	E. coli B70/3-2, DSM 10738
4797	E. coli M120/1-2, DSM 10739
4798	E. coli M115/1-1, DSM 10740
4799	E. coli IHE3119, DSM 10741
4800	E. coli IHE3055, DSM 10742
4801	E. coli IHE3113, DSM 10743
4802	E. coli IHE3101, DSM 10744
4803	E. coli IHE3103, DSM 10745
4804	E. coli A264, DSM 10746
4805	E. coli A269, DSM 10747
4806	E. coli A261, DSM 10748
4807	E. coli 21R/1-2, DSM 10749
4808	E. coli M62/1-2, DSM 10750
4809	E. coli IHE3104, DSM 10751
4810	E. coli D699(U5/41 Oac-), D699(U5/41 Oac^-), ...
4811	E. coli E7163/77, DSM 10753
4812	E. coli M188/1-10, DSM 10754
4813	E. coli 15R/1-4, DSM 10755
4814	E. coli M123/1-10, DSM 10756
4815	E. coli M20/3-2, DSM 10757
4816	E. coli B105/22-10, DSM 10758
4817	E. coli M210/1-6, DSM 10759
4818	E. coli M182/1-1, DSM 10760
4819	E. coli M6/1-1, DSM 10761
4820	E. coli 19R/2-4, DSM 10762
4821	E. coli M148/1-2, DSM 10763
4822	E. coli M2/1-2, DSM 10764
4823	E. coli IHE3114, A109, DSM 10765
4824	E. coli IHE3118, DSM 10766
4825	E. coli IHE3116, DSM 10767
4826	E. coli IHE3112, DSM 10768
4827	E. coli K235, A23, DSM 10770
4828	E. coli NB-12-15 (M. Green), DSM 10771
4829	E. coli 17R/1-3, DSM 10772
4830	E. coli IHE 3125, DSM 10773
4831	E. coli F86, DSM 10774
4832	E. coli F41, A1066, DSM 10775
4833	E. coli E2971/76, DSM 10776
4834	E. coli 6711115/80, 671^1115/80, DSM ...
4835	E. coli F34, DSM 10778
4836	E. coli F83, DSM 10779
4837	E. coli Z40, A178, DSM 10780
4838	E. coli Z11, DSM 10781
4839	E. coli J206, DSM 10782
4840	E. coli GXVII, DSM 10783
4841	E. coli B169/16-10, DSM 10784
4842	E. coli B149/2-2, DSM 10785
4843	E. coli M163/1-3, DSM 10786
4844	E. coli M158/1-3, DSM 10787
4845	E. coli M79/2-14, DSM 10788
4846	E. coli M162/1-5, DSM 10789
4847	E. coli 2954, DSM 10790
4848	E. coli 2980, strain 2980, A180, DSM 10791
4849	E. coli AXLIII, A154, DSM 10792
4850	E. coli AI, A127, DSM 10793
4851	E. coli IHE3134, A169, DSM 10794
4852	E. coli IHE3132, A167, DSM 10795
4853	E. coli 20383, A182, DSM 10796
4854	E. coli IHE3129, DSM 10797
4855	E. coli IHE3130, A165, DSM 10798
4856	E. coli IHE3043, A63, DSM 10799
4857	E. coli BE1-2928, DSM 10800
4858	E. coli A291, DSM 10801
4859	E. coli A267, DSM 10830
4860	E. coli N78, DSM 10831
4861	E. coli IHE3131, A166, DSM 10832
4862	E. coli 20380, A181, DSM 10833
4863	E. coli IHE3135, DSM 10834
4864	E. coli A131a, DSM 10835
4865	E. coli CM Pettis, DSM 10836
4866	E. coli M66/1-10, DSM 10837
4867	E. coli IHE3106, DSM 10838
4868	E. coli M21/1-3, DSM 10839
4869	E. coli B145/7-1, DSM 10840
4870	E. coli AXLIV, DSM 10841
4871	E. coli A276, DSM 10851
4872	E. coli A278, DSM 10852
4873	E. coli A279, DSM 10853
4874	E. coli A280, DSM 10854
4875	E. coli A271, DSM 10855
4876	E. coli A274, DSM 10856
4877	E. coli C69, DSM 10857
4878	E. coli 79/311, DSM 10858
4879	E. coli C183/77, DSM 10859
4880	E. coli delta6671, DSM 10973
4881	E. coli K12 O Rough H48, DSM 11250, CIP 54.117, IFO ...
4882	E. coli K12 BMH 71-18, DSM 11338
4883	E. coli K12 JM110, DSM 11539, ATCC 47013, NCIMB 12990
4884	E. coli DSM 11727, ICB 4524
4885	E. coli Bi623-42, DSM 11751
4886	E. coli F8188-41, DSM 11752
4887	E. coli F10018-41, DSM 11753
4888	E. coli ML309, DSM 12241, NCIMB 11032
4889	E. coli 13706/60, DSM 12242, NZRM 3262, ATCC 13706/60
4890	E. coli 15 his-, DSM 12488
4891	E. coli NK6024, DSM 12779, CGSC 6178
4892	E. coli KA197, PC 0614, DSM 12780, CGSC 5243
4893	E. coli PC 0886, DSM 13127, NCCB PC 0886
4894	E. coli DSM 13631, ATCC 9723, NCIMB 8114
4895	E. coli CB4120 O157:NM, DSM 13526
4896	E. coli C2, DSM 14166
4897	E. coli K12 RV308, DSM 15174, ATCC 31608, CCUG 28636, ...
4898	E. coli TOP10 (pBHR68), DSM 15372
4899	E. coli MHI 813, DSM 15856
4900	E. coli E81186, DSM 17076, NCTC 12900, JCM 18426, ...
4901	E. coli A 19, DSM 17884, NCCB 1376
4902	E. coli K12 MG1655, M. S. Guyer strain, MG1655, DSM ...
4903	E. coli GM48, K12 GM48, M. G. Marinus strain, DSM ...
4904	E. coli PBB 8, DSM 18416
4905	E. coli CB 4270, DSM 19206
4906	E. coli T6, DSM 30082, ATCC 12814
4908	E. coli 99-4, DSM 46219, ATCC 14561, IMET 10736
4909	E. coli 17, K12 W-3001, Lederberg W3001, W 3001, ...
4910	E. coli 22, 558-228, BU 432, BU 6,9, Oostendorp D ...
4911	E. coli Roepke 532-171, 532-171, BU 428, DSM 46333, ...
4912	E. coli 3072 WS, DSM 46345, IMET 11385
4913	E. coli DSM 46346, IMET 11386
4914	E. coli B, DSM 50902, ATCC 15144, ICPB 2262
4915	E. coli ST18, DSM 22074
4916	E. coli 824-DH, DSM 22311, CIP 105836
4917	E. coli CF 0034, DSM 22312, CIP 105860
4918	E. coli GR102, DSM 22313, CIP 105870
4919	E. coli CF 1702, DSM 22314, CIP 105871
4920	E. coli MG-1, DSM 22315, CIP 105877
4921	E. coli DSM 22316, CIP 105893
4922	E. coli BfR/NRL-AR-E467, NRL-ECRL 102/2005, NRL-Salm05E00174, ...
4923	E. coli BfR/NRL-AR-E476, NRL-EcRL284/06, NRL-Salm06E00094, ...
4924	E. coli Z205, DSM 22690, IMT 18834, KeC KEC337, KeC ...
4925	E. coli RL325/96, DSM 22691, AS 4019, IMT 18835, ...
4926	E. coli ID 12-18, DSM 25944
130954	E. coli Mt1B1, DSM 28618
23000	E. coli CB 1676, DSM 10974
23001	E. coli 3B3BAP1, DSM 26549
100253	E. coli STI43638(IMET), VKM Ac-653
23925	E. coli DSM 19683, CIP 106878, NCTC 13167, WDCM 00179, ...
23926	E. coli JM109 lambda pir, DSM 26091
23927	E. coli A 586, DSM 26863, CGSC 4925
24844	E. coli WG5, DSM 18455
24845	E. coli S17-1(PAS300), DSM 25162
130298	E. coli K12 UT5600, DSM 10971
130299	E. coli K12 strain 1200, DSM 10972
130300	E. coli SK7863psk(BEC/PP:3,3), DSM 15371
130301	E. coli CB 9149, DSM 27502
130302	E. coli CB 10214, DSM 27503
131713	E. coli CFT073, DSM 103538, ATCC 700928
131714	E. coli 83972, DSM 103539
132730	E. coli E2, DSM 105182, NCTC 13846, CCUG 70662
134398	E. coli BM8445 - I2247, CIP 107904
134399	E. coli BM8463-I2379, CIP 107905
134430	E. coli PAP702, CIP 105671, NCTC 50163
134438	E. coli A2, CIP 105185, NCTC 10964
134451	E. coli CIP 107680, ATCC 700078
134454	E. coli CIP 106531
134458	E. coli 2011/09941, Ec11/09941, Ec11-9941, CIP 110603
134469	E. coli 2011/09990, Ec11-9990, CIP 110604
134470	E. coli 2012/00466, Ec12-0466, CIP 110601
134487	E. coli CIP 105778
134524	E. coli DD, CIP 106000, ECOR 51
134528	E. coli FN4, CIP 105986, ECOR 55
134530	E. coli RM202I, CIP 105987, ECOR 65
134531	E. coli T44, CIP 106001, ECOR 41
134533	E. coli FN59, CIP 106017, ECOR 12
134535	E. coli FN36, CIP 106027, ECOR 43
134536	E. coli RM200Q, CIP 106028, ECOR 17
134537	E. coli P106, CIP 106029, ECOR 56
134538	E. coli RM64A, CIP 106037, ECOR 54
134539	E. coli WIR1(a), CIP 106038, ECOR 3
134540	E. coli RM60A, CIP 106039, ECOR 5
134541	E. coli RM211C, CIP 106050, ECOR 47
134542	E. coli ANI, CIP 106051, ECOR 10
134572	E. coli CIP 106530
134633	E. coli TW 00947, C585-65, DEC5d, CIP 107191
134667	E. coli CIP 55.58
134697	E. coli DH5? ?pir, CIP 108662
134715	E. coli 2011/03677, Ec11-3677, CIP 110349
134804	E. coli CIP A172
134827	E. coli CIP 71.6
134840	E. coli CIP 75.14
134855	E. coli CIP A224
134867	E. coli CIP 79.6
134878	E. coli CIP 81.85
134892	E. coli CIP 52.169
134916	E. coli 2012/0465, EC-12-0465, CIP 110600
134940	E. coli CIP 102766
134972	E. coli TW 00676, DEC13a, CIP 107199, CDC 3350-73
134974	E. coli TW 00073, DEC6a, CIP 107192, CDC 5338-66
134975	E. coli TW 00186, DEC8b, CIP 107194, CDC 3030A-8b
134976	E. coli TW 01206, DEC9a, CIP 107195, CDC 3323-61
134977	E. coli TW 00664, DEC11a, CIP 107197, CDC 2254-75
134978	E. coli F1-50, TW 01277, DEC12a, CIP 107198
134984	E. coli CIP 107219
135087	E. coli J96, CIP 108106
135186	E. coli BZB2149, CIP 105646, NCTC 50135
135194	E. coli BZB1191, CIP 105637, NCTC 50159
135195	E. coli BZB2115, CIP 105638, NCTC 50142
135196	E. coli PAP1372, CIP 105639, NCTC 50155
135197	E. coli BZB2104, CIP 105640, NCTC 50132
135198	E. coli BZB2106, CIP 105645, NCTC 50134
135199	E. coli BZB2107, CIP 105647, NCTC 50136
135200	E. coli BZB2150, CIP 105649, NCTC 50138
135209	E. coli CIP 106239
135216	E. coli K-12S, CIP 54.118, NCIMB 10084
135234	E. coli 2004/08351, Ec04-8351, CIP 110347
135262	E. coli CIP 53.4
135281	E. coli TW 00601, 750001, DEC7a, CIP 107193
135354	E. coli 2639E, CIP 103985
135408	E. coli F 42, CIP 52.172
135410	E. coli CIP 104103
135442	E. coli FN98, CIP 106031, ECOR 9
135460	E. coli CIP A223
135478	E. coli CIP 105184, NCTC 10674, CCUG 11441, CNCTC ...
135482	E. coli CIP 105992, ECOR 21
135491	E. coli CIP 106918
135511	E. coli 12, CIP 81.86
135522	E. coli C1250-90, CIP 105241
135529	E. coli CIP 106010, RM 28, ECOR 32
135530	E. coli RM52B, CIP 106044, ECOR 28
135557	E. coli 2011/04404, Ec11-4404, CIP 110351
135584	E. coli CIP 56.14
135618	E. coli T-3, CIP 60.72, JCM 20376, ATCC 15491, IAM ...
135623	E. coli CIP 61.3
135627	E. coli B184, CIP 62.19, NCIMB 10201
135628	E. coli ML 52, CIP 62.20
135629	E. coli E6912, CIP 62.22, NCTC 9855
135630	E. coli CIP 62.23, NCTC 9119, CCUG 11420
135640	E. coli BAM, CIP 63.70
135671	E. coli CIP 70.68, ATCC 25256
135687	E. coli CIP 74.14
135692	E. coli J53 (J5-3) F+, CIP 75.18
135709	E. coli CIP 81.88
135736	E. coli R 888, CIP 100631
135749	E. coli SM10 ?pir, CIP 108663
135769	E. coli CIP 61.12, NCTC 9707
135802	E. coli CIP 79.49
135803	E. coli CIP 79.50
135808	E. coli CIP A246
135811	E. coli CIP A247
135831	E. coli C27, CIP 51.37
135873	E. coli BM694, CIP 103717
135877	E. coli B-96, CIP 103740, ATCC 13473
135878	E. coli CIP 53.29, ATCC 19413, NCTC 1601
135880	E. coli CIP 53.30, NCTC 5379
135882	E. coli CIP 53.31
135887	E. coli CIP 53.32
135888	E. coli CIP 53.33
135889	E. coli CIP 103809
135891	E. coli CIP 53.40
135914	E. coli BZB2108, CIP 105648, NCTC 50137
135915	E. coli CIP 105698
135917	E. coli CIP 105866
135920	E. coli RM202F, CIP 105998, ECOR 46
135931	E. coli Y10 F-, CIP 54.120, NCIMB 10085
135946	E. coli CIP 104723
135959	E. coli CIP 51.41
135966	E. coli CIP 51.36
135994	E. coli CIP A266
135995	E. coli CIP 51.7
135997	E. coli CIP 51.8
136135	E. coli CIP 52.173
136136	E. coli CIP 52.174
136210	E. coli C SMR10, CIP 103476, ATCC 47008
136215	E. coli 2011/05536, Ec11-5536, CIP 110352
136240	E. coli CIP 53.38
136241	E. coli BM03, CIP 103931
136248	E. coli CF 204, CIP 103982
136249	E. coli CF 604, CIP 103984
136257	E. coli JM109, CIP 104049
136261	E. coli JM101, CIP 104046
136262	E. coli JM105, CIP 104047
136264	E. coli JM107, CIP 104048, CCUG 42942
136318	E. coli 10362, CIP 104525
136333	E. coli CIP 104667
136340	E. coli P400, CIP 104739
136356	E. coli J53-2, CIP 104886
136388	E. coli CIP 105167
136393	E. coli CIP 105186, NCTC 8007, CCUG 42878
136397	E. coli CIP 105239
136422	E. coli TG1, CIP 105537, CRBIP19.2
136430	E. coli JJC 276, PAP 6154, PAP6154, CIP 105636
136431	E. coli BZB2116, CIP 105653, NCTC 50143
136432	E. coli PAP1, CIP 105654, NCTC 50144
136440	E. coli pop6071, HS2019, CIP 105743
136454	E. coli CIP 54.52, NCTC 9002, CCUG 25
136460	E. coli CIP 105935
136468	E. coli RM224H, CIP 105988, ECOR 68
136473	E. coli RM24J, CIP 106042, ECOR 27
136474	E. coli RM74A, CIP 106043, ECOR 1
136531	E. coli TX595, CIP 106496, CGSC 7039
136533	E. coli PC0273, H882, CIP 106497, CGSC 4436
136544	E. coli pop154, CIP 107071
136566	E. coli B/r, CIP 54.156, ATCC 12407, NCIMB 9485
136578	E. coli CIP 107032
136579	E. coli CIP 107033
136580	E. coli CIP 107034
136589	E. coli CIP 81.87
136612	E. coli 56-54, CIP 105183, NCTC 9708, CCUG 11427
136629	E. coli TW 03996, C 916-70, DEC14a, CIP 107200
136632	E. coli TW00588, DEC1a, CIP 107187, CDC 572-56
136633	E. coli TW 00460, DEC2a, CIP 107188, CDC 3787-62
136646	E. coli BL21 (lambda DE3), CIP 107305
136660	E. coli CIP 107458
136666	E. coli TEM-10, CIP 107484
136686	E. coli CIP 55.55
136690	E. coli CIP 66.1
136695	E. coli CIP pACYC184
136699	E. coli CIP pAT18
136705	E. coli CIP MIP231
136706	E. coli CIP pACYC177
136707	E. coli CIP pAT101
136708	E. coli CIP pAT104
136709	E. coli CIP pAT105
136710	E. coli CIP pAT112
136711	E. coli CIP pAT114
136712	E. coli CIP pAT113
136714	E. coli CIP pAT16
136715	E. coli CIP pAT121
136716	E. coli CIP pAT240
136717	E. coli CIP pAT271
136718	E. coli CIP pAT272
136719	E. coli CIP pAT273
136720	E. coli CIP pAT19
136723	E. coli CIP pIP1645
136724	E. coli CIP pUC-TMD
136725	E. coli CIP pUC18
136726	E. coli CIP pUC-LMA
136733	E. coli CIP 106328, ATCC 51657
136770	E. coli CIP 107049
136789	E. coli PAP138b, CIP 105670, NCTC 50162
136844	E. coli CIP pIP1607
136853	E. coli PQ 37, CIP 104368
136885	E. coli 2011/09450, Ec11-9450, CIP 110602
136887	E. coli BZB2101, CIP 105643, NCTC 50129
136917	E. coli 28CNalr, CIP 107983
136931	E. coli CIP 108105
136945	E. coli CIP 108384
136977	E. coli CIP 109113
136978	E. coli RS162, pop6557, CIP 109114, CGSC 6349
137009	E. coli CIP 109776, CGSC 5073
137014	E. coli 669 CH, CIP 109842
137084	E. coli CIP 52.175
137094	E. coli 2011/05537, Ec11-5537, CIP 110353
137095	E. coli P11-4623, 2011/06189, Ec11-4623, CIP 110356
137130	E. coli K-12 AB1133 F-, CIP 70.59
137134	E. coli 2011/03798, Ec11-3798, CIP 110350
137145	E. coli M 500 Hfr, CIP 74.28
137165	E. coli CIP 53.37
137168	E. coli CIP 53.39
137171	E. coli CB-134, 134K, CIP 103983
137172	E. coli JM110, CIP 104050
137177	E. coli PAP2, CIP 105656, NCTC 50146
137243	E. coli 2009/07901, Ec09-7901, CIP 110348
137255	E. coli JM83, CIP 104022
137298	E. coli DH10B, CIP 105601
137311	E. coli CIP 106123
137312	E. coli JM103, CIP 106124
137395	E. coli 412, CIP 108383
137412	E. coli TEM-26, CIP 107485
137413	E. coli SHV-5, CIP 107486
137430	E. coli CIP 105217
137456	E. coli 205-2, CIP 55.117
137553	E. coli TW 00074, DEC15a, CIP 107201, CDC 5430-66
137689	E. coli CIP 105543
137703	E. coli B6914-MS1 (3417-86), CIP 105917, ATCC 43888, ...
137704	E. coli LL, CIP 105999, ECOR 26
137705	E. coli RM210F, CIP 106005, ECOR 18
137706	E. coli RM191F, CIP 106015, ECOR 16
137707	E. coli RM209I, CIP 106025, ECOR 66
137708	E. coli RM10A, CIP 106026, ECOR 30
137709	E. coli RM39A, CIP 106036, ECOR 4
137710	E. coli RM73C, CIP 106040, ECOR 7
137711	E. coli RM71B, CIP 106049, ECOR 57
137712	E. coli RM42B, CIP 106054, ECOR 35
137818	E. coli CIP 51.58
137965	E. coli 68-B, CIP 52.131
138009	E. coli 515-86, CIP 102494
138010	E. coli CIP 102770
138073	E. coli DB10, CIP 104540
138086	E. coli JM108, CIP 104644
138187	E. coli CIP 105216
138188	E. coli 80-2399, CIP 105228
138239	E. coli CIP 105779
138260	E. coli CIP 105901
138261	E. coli CIP 105902
138267	E. coli CIP 105926
138270	E. coli 96003007, CIP 105903
138282	E. coli RM183E, CIP 105989, ECOR 23
138283	E. coli FN104, CIP 105990, ECOR 39
138284	E. coli RM75A, CIP 105991, ECOR 38
138285	E. coli RM45EM, CIP 105993, ECOR 69
138286	E. coli P97, CIP 105994, ECOR 50
138287	E. coli RM201C, CIP 105995, ECOR 45
138288	E. coli RM189I, CIP 105996, ECOR 44
138290	E. coli RM213I, CIP 105997, ECOR 20
138291	E. coli MSI, CIP 106002, ECOR 25
138292	E. coli RM73A, CIP 106003, ECOR 52
138293	E. coli FN21, CIP 106004, ECOR 63
138294	E. coli ABU84, CIP 106006, ECOR 71
138296	E. coli RM215C, CIP 106007, ECOR 22
138297	E. coli CIP 106008
138298	E. coli RM44B, CIP 106009, ECOR 37
138299	E. coli WIR2, CIP 106011, ECOR 34
138300	E. coli P60, CIP 106012, ECOR 40
138301	E. coli FN23, CIP 106013, ECOR 61
138302	E. coli P62, CIP 106014, ECOR 14
138303	E. coli FN10, CIP 106018, ECOR 13
138304	E. coli RM217T, CIP 106019, ECOR 67
138305	E. coli P69, CIP 106020, ECOR 62
138306	E. coli FN3, CIP 106021, ECOR 15
138307	E. coli RM185S, CIP 106022, ECOR 58
138308	E. coli C90, CIP 106023, ECOR 48
138309	E. coli RM56C, CIP 106024, ECOR 33
138310	E. coli RM70B, CIP 106030, ECOR 70
138311	E. coli C89, CIP 106032, ECOR 60
138312	E. coli FN33, CIP 106033, ECOR 24
138313	E. coli SIL8, CIP 106034, ECOR 59
138314	E. coli RM77C, CIP 106035, ECOR 8
138315	E. coli C70, CIP 106041, ECOR 64
138316	E. coli CIP 106045, RM 12, ECOR 31
138317	E. coli CIP 106046, DAR 1, ECOR 42
138318	E. coli CIP 106047, STM 1, ECOR 2
138319	E. coli RM3A, CIP 106048, ECOR 29
138320	E. coli P68, CIP 106052, ECOR 72
138321	E. coli RM210J, CIP 106053, ECOR 19
138322	E. coli FN90, CIP 106055, ECOR 49
138323	E. coli RM33B, CIP 106056, ECOR 53
138324	E. coli RM66C, CIP 106057, ECOR 6
138385	E. coli CIP 106916
138386	E. coli CIP 106917
138387	E. coli CIP 106919
138393	E. coli CIP 107035
138434	E. coli BZB2103, CIP 105641, NCTC 50131
138475	E. coli CIP 105240
138477	E. coli CIP A248
138482	E. coli BM21, CIP 103930, CRBIP19.9
138483	E. coli CIP 51.10
138492	E. coli Hfr KL 16, CIP 104722
138587	E. coli C97, CIP 106016, ECOR 11
138607	E. coli F 41, CIP 52.171, NCTC 8960
138616	E. coli E2985, CIP 105182, NCTC 11602
138617	E. coli CIP 105215
138620	E. coli CIP 51.9
138651	E. coli CIP 51.43
138744	E. coli CIP 52.168
138751	E. coli 741-86, CIP 102753
138796	E. coli CIP 51.57
138814	E. coli 2011/05538, Ec11-5538, CIP 110354
138815	E. coli P11-4632, 2011/06190, Ec11-4632-c1, CIP 110355
138879	E. coli CIP 60.71
139043	E. coli 69, CIP 78.18
139055	E. coli CIP 78.17
139100	E. coli CIP 53.28
139104	E. coli CIP 53.34
139113	E. coli CIP 53.35
139134	E. coli F45, CIP 51.38
139135	E. coli CIP 54.122, ATCC 23559, NCIMB 9951
139168	E. coli E40, CIP 51.39
139169	E. coli CIP 51.40
139175	E. coli 47, CIP 51.47
139195	E. coli CIP 104738
139254	E. coli CIP 53.125, ATCC 9492, NCIMB 8557
139259	E. coli BZB2110, CIP 105650, NCTC 50139
139260	E. coli PAP247, CIP 105651, NCTC 50140
139261	E. coli BZB2114, CIP 105652, NCTC 50141
139262	E. coli BZB2123, CIP 105655, NCTC 50145
139263	E. coli PAP222, CIP 105657, NCTC 50147
139265	E. coli BZB2283, CIP 105658, NCTC 50148
139266	E. coli PAP1370, CIP 105660, NCTC 50150
139267	E. coli CA46, CIP 105662, NCTC 50152
139268	E. coli CA58, CIP 105663, NCTC 50153
139269	E. coli BZB1011, CIP 105664, NCTC 50154
139270	E. coli BZB1030, CIP 105665, NCTC 50156
139271	E. coli BZB1022, CIP 105666, NCTC 50157
139272	E. coli PAP1360, CIP 105667, NCTC 50158
139273	E. coli BZB1192, CIP 105668, NCTC 50160
139274	E. coli PAP308, CIP 105669, NCTC 50161
139276	E. coli PAP710, CIP 105672, NCTC 50164
139279	E. coli CIP 105861
139280	E. coli CIP 105862
139281	E. coli CIP 105863
139282	E. coli CIP 105864
139283	E. coli CIP 105865
139284	E. coli CIP 105867
139315	E. coli CIP 106223
139326	E. coli CIP 106235
139359	E. coli 58-161F+, CIP 54.121, ATCC 23589, NCIMB 9950
139361	E. coli W677 F-, CIP 54.123, NCIMB 9954
139392	E. coli B, CIP 54.125, NCTC 10537, NCIMB 9484
139420	E. coli CIP 62.25
139424	E. coli CIP 59.42
139456	E. coli 1064, CIP 52.170, NCTC 8959
139463	E. coli Canioni, CIP 62.24, NCTC 8623, CCUG 11424
139472	E. coli MG1655, CIP 106782, CRBIP19.5
139483	E. coli CIP 103470
139486	E. coli CIP 105706
139506	E. coli N170, CIP 110905, NCTC 13216, WDCM 00202, ...
139528	E. coli 4608-58, CIP 110272, NCIMB 13059, NCTC 10090, ...
139591	E. coli BZB2102, CIP 105642, NCTC 50130
139592	E. coli BZB2125, CIP 105644, NCTC 50133
139622	E. coli E990, CIP 62.21, NCTC 8621
139623	E. coli CIP 105242
139738	E. coli K-12 CL83 (JM83-recA56) with plasmid pCL1920, ...
139739	E. coli BW25113, DSM 27469, CGSC 7636
141176	E. coli CCUG 26
141177	E. coli CCUG 27, ATCC 19138, NCTC 9006
141178	E. coli CCUG 28, ATCC 23503, NCTC 9007
141179	E. coli CCUG 29 A, ATCC 25304, NCTC 9008
141180	E. coli CCUG 30 A, NCTC 9018
141181	E. coli CCUG 31
141254	E. coli CCUG 423
141256	E. coli CCUG 430 A
141293	E. coli CCUG 736
141350	E. coli CCUG 1164
141537	E. coli CCUG 2716
141541	E. coli CCUG 2823
141658	E. coli CCUG 4488
141659	E. coli CCUG 4489
141724	E. coli CCUG 5362
141740	E. coli CCUG 5897
141768	E. coli CCUG 6549
141840	E. coli CCUG 7721
141877	E. coli CCUG 8013
141887	E. coli CCUG 8230
141941	E. coli CCUG 8511
141956	E. coli CCUG 8743 A
142015	E. coli CCUG 9855 B
142069	E. coli CCUG 10361
142163	E. coli CCUG 11300
142164	E. coli CCUG 11301
142165	E. coli CCUG 11302
142166	E. coli CCUG 11303, ATCC 23501, NCTC 9003
142167	E. coli CCUG 11304
142168	E. coli CCUG 11305
142169	E. coli CCUG 11306
142170	E. coli CCUG 11307, NCTC 9005
142171	E. coli CCUG 11308
142172	E. coli CCUG 11309
142173	E. coli CCUG 11310
142174	E. coli CCUG 11311
142175	E. coli CCUG 11312
142176	E. coli CCUG 11313
142177	E. coli CCUG 11314
142178	E. coli CCUG 11315, ATCC 23505, NCTC 9009
142179	E. coli CCUG 11316, NCDC Bi8337-41, ATCC 23506, NCTC ...
142180	E. coli CCUG 11317, ATCC 23507, NCTC 9011
142181	E. coli CCUG 11318, ATCC 23508, NCTC 9012
142182	E. coli CCUG 11319, ATCC 23509, NCTC 9013
142183	E. coli CCUG 11320, ATCC 19110, NCTC 9014
142184	E. coli CCUG 11321, ATCC 23510, NCTC 9015
142185	E. coli CCUG 11322, ATCC 23511, NCTC 9016
142186	E. coli CCUG 11323, ATCC 23512, NCTC 9017
142187	E. coli CCUG 11324, ATCC 23514, NCTC 9019
142188	E. coli CCUG 11325, ATCC 23515, NCTC 9020
142189	E. coli CCUG 11328
142190	E. coli CCUG 11329
142191	E. coli CCUG 11330, NCTC 9024
142192	E. coli CCUG 11331, NCTC 10429
142193	E. coli CCUG 11332, NCTC 9026
142194	E. coli CCUG 11333, ATCC 23519, NCTC 9027
142195	E. coli CCUG 11334, NCTC 9028
142196	E. coli CCUG 11335, NCTC 9699
142197	E. coli CCUG 11336, NCTC 9029
142198	E. coli CCUG 11337, ATCC 23521, NCTC 9030
142199	E. coli CCUG 11338, ATCC 23522, NCTC 9032
142200	E. coli CCUG 11339
142201	E. coli CCUG 11341, ATCC 23524, NCTC 9034
142202	E. coli CCUG 11342, ATCC 23525, NCTC 9035
142203	E. coli CCUG 11343, ATCC 23526, NCTC 9036
142204	E. coli CCUG 11344, ATCC 23527, NCTC 9037
142205	E. coli CCUG 11345, ATCC 23528, NCTC 9038
142206	E. coli CCUG 11346, NCTC 9039
142207	E. coli CCUG 11347, NCTC 9040
142208	E. coli CCUG 11348, ATCC 23529, NCTC 9042
142209	E. coli CCUG 11349, NCTC 9043
142210	E. coli CCUG 11350, NCTC 9045
142211	E. coli CCUG 11351, NCTC 9046
142212	E. coli CCUG 11352
142213	E. coli CCUG 11353
142214	E. coli CCUG 11354
142215	E. coli CCUG 11355
142216	E. coli CCUG 11356
142217	E. coli CCUG 11357
142218	E. coli CCUG 11358
142219	E. coli CCUG 11359
142220	E. coli CCUG 11360, NCTC 9056
142221	E. coli CCUG 11361
142222	E. coli CCUG 11362
142223	E. coli CCUG 11363
142224	E. coli CCUG 11364
142225	E. coli CCUG 11365
142226	E. coli CCUG 11366
142227	E. coli CCUG 11367
142228	E. coli CCUG 11368, NCTC 9065
142229	E. coli CCUG 11369
142230	E. coli CCUG 11370
142231	E. coli CCUG 11371
142232	E. coli CCUG 11372
142233	E. coli CCUG 11373, ATCC 23534, NCTC 9071
142234	E. coli CCUG 11374, NCTC 9073
142235	E. coli CCUG 11375
142236	E. coli CCUG 11376, ATCC 23535, NCTC 9074
142237	E. coli CCUG 11377, NCTC 9075
142238	E. coli CCUG 11378, ATCC 23536, NCTC 9076
142239	E. coli CCUG 11379, ATCC 23537, NCTC 9077
142240	E. coli CCUG 11381
142241	E. coli CCUG 11382, NCTC 9080
142242	E. coli CCUG 11383, ATCC 23979, NCTC 9081
142243	E. coli CCUG 11384, NCTC 9082
142244	E. coli CCUG 11385, NCDC H17A, ATCC 23538, NCTC 9083
142245	E. coli CCUG 11386
142246	E. coli CCUG 11387
142247	E. coli CCUG 11388, NCTC 9086
142248	E. coli CCUG 11389, NCTC 9087
142249	E. coli CCUG 11390, ATCC 23986, NCTC 9088
142250	E. coli CCUG 11391, NCTC 9089
142251	E. coli CCUG 11392, NCTC 9090
142252	E. coli CCUG 11393, NCDC H307b, ATCC 23980, NCTC ...
142253	E. coli CCUG 11394, NCTC 9092
142254	E. coli CCUG 11395, NCTC 9093
142255	E. coli CCUG 11396
142256	E. coli CCUG 11397
142257	E. coli CCUG 11398, NCTC 9097
142258	E. coli CCUG 11399
142259	E. coli CCUG 11400, NCTC 9099
142260	E. coli CCUG 11401
142261	E. coli CCUG 11402, NCTC 9101
142262	E. coli CCUG 11403
142263	E. coli CCUG 11404
142264	E. coli CCUG 11405, NCTC 9104
142265	E. coli CCUG 11406, NCTC 9105
142266	E. coli CCUG 11407
142267	E. coli CCUG 11408
142268	E. coli CCUG 11409
142269	E. coli CCUG 11410
142270	E. coli CCUG 11411
142271	E. coli CCUG 11413, NCTC 9112
142272	E. coli CCUG 11414
142273	E. coli CCUG 11415
142274	E. coli CCUG 11416
142275	E. coli CCUG 11417
142276	E. coli CCUG 11418
142277	E. coli CCUG 11419
142278	E. coli CCUG 11421
142279	E. coli CCUG 11422
142280	E. coli CCUG 11423
142281	E. coli CCUG 11425, NCTC 8622
142282	E. coli CCUG 11426
142283	E. coli CCUG 11428
142284	E. coli CCUG 11429
142285	E. coli CCUG 11430
142286	E. coli CCUG 11431
142287	E. coli CCUG 11432
142288	E. coli CCUG 11433
142289	E. coli CCUG 11434
142290	E. coli CCUG 11435
142291	E. coli CCUG 11436
142292	E. coli CCUG 11437
142293	E. coli CCUG 11438
142294	E. coli CCUG 11439, NCTC 10086, CNCTC EcK 196/59
142295	E. coli CCUG 11440
142296	E. coli CCUG 11442, NCDC C771, ATCC 23985
142297	E. coli CCUG 11444, CNCTC Eck 249/65
142298	E. coli CCUG 11445
142299	E. coli CCUG 11446, NCTC 10677
142300	E. coli CCUG 11447, NCTC 10758
142301	E. coli CCUG 11448, NCTC 10664
142302	E. coli CCUG 11449
142303	E. coli CCUG 11450, NCTC 9004
142338	E. coli CCUG 11811
142381	E. coli CCUG 12137
142583	E. coli CCUG 13132
142726	E. coli CCUG 14257
142799	E. coli CCUG 14873
142860	E. coli CCUG 15392
142861	E. coli CCUG 15393
142862	E. coli CCUG 15394
142863	E. coli CCUG 15395
143168	E. coli CCUG 17641
143169	E. coli CCUG 17642
143170	E. coli CCUG 17643
143171	E. coli CCUG 17644
143172	E. coli CCUG 17649
143173	E. coli CCUG 17650
143174	E. coli CCUG 17651
143176	E. coli CCUG 17667
143463	E. coli CCUG 19400
143464	E. coli CCUG 19401
143465	E. coli CCUG 19402
143499	E. coli CCUG 19551 A
143562	E. coli CCUG 20136
143605	E. coli CCUG 20561
143607	E. coli CCUG 20570, CECT 4076
143608	E. coli CCUG 20571
143609	E. coli CCUG 20572
143610	E. coli CCUG 20573
143611	E. coli CCUG 20574
143861	E. coli CCUG 21637, NCTC 50010
143862	E. coli CCUG 21638, NCTC 50102
143863	E. coli CCUG 21645, NCTC 50192
143924	E. coli CCUG 21862 A
144066	E. coli CCUG 22670
144146	E. coli CCUG 23166
144147	E. coli CCUG 23167
144186	E. coli CCUG 23386
144266	E. coli CCUG 24079
144267	E. coli CCUG 24080
144375	E. coli CCUG 24800
144376	E. coli CCUG 24801
144377	E. coli CCUG 24802
144380	E. coli CCUG 24813
144406	E. coli CCUG 24870
144567	E. coli CCUG 25709
144654	E. coli CCUG 26102
144692	E. coli CCUG 26249
144704	E. coli CCUG 26325
144755	E. coli CCUG 26462 A
144850	E. coli CCUG 26812
145057	E. coli CCUG 27532
145145	E. coli CCUG 27748
145146	E. coli CCUG 27749, CNCTC EcK 200/59
145426	E. coli CCUG 28451, CGSC 6115
145433	E. coli CCUG 28490
145472	E. coli CCUG 28637
145591	E. coli CCUG 28914, CGSC 6123
145669	E. coli CCUG 29187
145670	E. coli CCUG 29189
145671	E. coli CCUG 29190
145672	E. coli CCUG 29191
145673	E. coli CCUG 29192
145674	E. coli C984, CCUG 29193, ATCC 43890, CIP 106325
145675	E. coli CCUG 29194
145676	E. coli CCUG 29195
145677	E. coli CCUG 29196
145678	E. coli CCUG 29197 B, ATCC 43895, CIP 106327, CCRC ...
145679	E. coli CCUG 29198
145680	E. coli B1409-C1, CCUG 29199, ATCC 43889, CIP 106324
145730	E. coli CCUG 29422
145731	E. coli CCUG 29423
145792	E. coli CCUG 29598
145809	E. coli CCUG 29657
145810	E. coli CCUG 29659
145844	E. coli CCUG 29768, CGSC 259
145845	E. coli CCUG 29769, CGSC 5456
145846	E. coli CCUG 29770, CGSC 5573
145979	E. coli CCUG 30071
146170	E. coli CCUG 30495
146171	E. coli CCUG 30496
146172	E. coli CCUG 30497
146225	E. coli CCUG 30652
146244	E. coli CCUG 30693
146269	E. coli CCUG 30758
146314	E. coli CCUG 30874, CGSC 6796
146434	E. coli CCUG 31128
146435	E. coli CCUG 31129
146473	E. coli CCUG 31244
146474	E. coli CCUG 31246
146475	E. coli CCUG 31247
146476	E. coli CCUG 31248
146477	E. coli CCUG 31249
146478	E. coli CCUG 31250
146479	E. coli CCUG 31251
146492	E. coli CCUG 31313
146651	E. coli CCUG 31727
146706	E. coli CCUG 31997, NCTC 10960
146760	E. coli CCUG 32075
147084	E. coli CCUG 32825, NCC PC2955
147146	E. coli CCUG 32948
147147	E. coli CCUG 32949
147167	E. coli CCUG 32978
147183	E. coli CCUG 33012 A
147194	E. coli CCUG 33034
147196	E. coli CCUG 33036
147270	E. coli CCUG 33238
147327	E. coli CCUG 33373
147333	E. coli CCUG 33385
147428	E. coli CCUG 33572
147745	E. coli CCUG 34134
147786	E. coli CCUG 34224 B
148030	E. coli CCUG 34710
148058	E. coli CCUG 34744
148060	E. coli CCUG 34746
148154	E. coli CCUG 34911
148186	E. coli CCUG 35008
148187	E. coli CCUG 35009
148222	E. coli CCUG 35066
148278	E. coli CCUG 35140
148287	E. coli CCUG 35162
148343	E. coli CCUG 35258
148535	E. coli CCUG 35610, ATCC 51739
148557	E. coli CCUG 35633
148558	E. coli CCUG 35634
148559	E. coli CCUG 35635
148576	E. coli CCUG 35662
148600	E. coli CCUG 35691
148807	E. coli CCUG 35961
148862	E. coli CCUG 36518
148863	E. coli CCUG 36519, NCTC 10957
148864	E. coli CCUG 36520
148865	E. coli CCUG 36521
148866	E. coli CCUG 36522
148867	E. coli CCUG 36523
148868	E. coli CCUG 36524
148869	E. coli CCUG 36525
148870	E. coli CCUG 36526
148871	E. coli CCUG 36527
148872	E. coli CCUG 36528
148873	E. coli CCUG 36529
148874	E. coli CCUG 36530
148875	E. coli CCUG 36531
148876	E. coli CCUG 36532, NCTC 10361
148877	E. coli CCUG 36533
148878	E. coli CCUG 36534
148879	E. coli CCUG 36535
148880	E. coli CCUG 36536
148881	E. coli CCUG 36537
148882	E. coli CCUG 36538
148883	E. coli CCUG 36539
148884	E. coli CCUG 36540
148885	E. coli CCUG 36541
148937	E. coli CCUG 36608
148955	E. coli CCUG 36638
149051	E. coli CCUG 36786
149128	E. coli CCUG 36899
149266	E. coli CCUG 37381
149267	E. coli CCUG 37382
149328	E. coli CCUG 37520
149533	E. coli CCUG 37919
149588	E. coli CCUG 38018
149609	E. coli CCUG 38068
149610	E. coli CCUG 38069
149611	E. coli CCUG 38070
149612	E. coli CCUG 38071
149613	E. coli CCUG 38072
149614	E. coli CCUG 38073
149615	E. coli CCUG 38074
149616	E. coli CCUG 38075
149617	E. coli CCUG 38076
149618	E. coli CCUG 38077
149619	E. coli CCUG 38078
149620	E. coli CCUG 38079
149621	E. coli CCUG 38080
149622	E. coli CCUG 38081
149623	E. coli CCUG 38082
149624	E. coli CCUG 38083
149625	E. coli CCUG 38084
149626	E. coli CCUG 38085
149627	E. coli CCUG 38086
149628	E. coli CCUG 38087
149629	E. coli CCUG 38088
149630	E. coli CCUG 38089
149631	E. coli CCUG 38090
149632	E. coli CCUG 38091
149633	E. coli CCUG 38092
149634	E. coli CCUG 38093
149635	E. coli CCUG 38094
149646	E. coli CCUG 38111
149659	E. coli CCUG 38137
149698	E. coli CCUG 38231
149704	E. coli CCUG 38246
149705	E. coli CCUG 38247
149706	E. coli CCUG 38249
149729	E. coli CCUG 38290
149767	E. coli CCUG 38355 A
149935	E. coli CCUG 38712
150054	E. coli CCUG 38922
150126	E. coli CCUG 39050
150145	E. coli CCUG 39094
150212	E. coli CCUG 39296
150229	E. coli CCUG 39329
150351	E. coli CCUG 39710
150465	E. coli CCUG 41370
150466	E. coli CCUG 41371
150488	E. coli CCUG 41421
150489	E. coli CCUG 41422
150490	E. coli CCUG 41423
150491	E. coli CCUG 41424
150492	E. coli CCUG 41425
150493	E. coli CCUG 41426
150494	E. coli CCUG 41427
150495	E. coli CCUG 41428
150496	E. coli CCUG 41429
150497	E. coli CCUG 41430
150498	E. coli CCUG 41431
150499	E. coli CCUG 41432
150639	E. coli CCUG 41841
150642	E. coli CCUG 41844
150643	E. coli CCUG 41845
150674	E. coli CCUG 41935, NCTC 9113
150733	E. coli CCUG 42117
150734	E. coli CCUG 42118
150762	E. coli CCUG 42216
150917	E. coli CCUG 42744
150931	E. coli CCUG 42769
150943	E. coli CCUG 42816, CGSC 5158
150971	E. coli CCUG 42901
150984	E. coli CCUG 42937
151158	E. coli CCUG 43384
151171	E. coli CCUG 43402
151277	E. coli CCUG 43600
151278	E. coli CCUG 43601
151326	E. coli CCUG 43753
151455	E. coli CCUG 44101 A
151456	E. coli CCUG 44101 B
151468	E. coli CCUG 44113
151758	E. coli CCUG 44808
151777	E. coli CCUG 44857
151866	E. coli CCUG 45095
151868	E. coli CCUG 45097
151875	E. coli CCUG 45104
151954	E. coli CCUG 45339
152078	E. coli CCUG 45706 A
152079	E. coli CCUG 45706 C
152080	E. coli CCUG 45709 A
152081	E. coli CCUG 45709 B
152082	E. coli CCUG 45709 C
152083	E. coli CCUG 45710 B
152084	E. coli CCUG 45711 A
152085	E. coli CCUG 45711 B
152086	E. coli CCUG 45712
152087	E. coli CCUG 45713
152214	E. coli CCUG 46111
152313	E. coli CCUG 46406
152544	E. coli CCUG 47032
152611	E. coli CCUG 47194
152754	E. coli CCUG 47553
152755	E. coli CCUG 47554
152756	E. coli CCUG 47556
152757	E. coli CCUG 47557
152796	E. coli CCUG 47636
152797	E. coli CCUG 47637
152798	E. coli CCUG 47638
152799	E. coli CCUG 47639
152801	E. coli CCUG 47655
153017	E. coli CCUG 48326
153558	E. coli CCUG 50176, CGSC 2480
153559	E. coli CCUG 50177, CGSC 5378
153805	E. coli CCUG 51204
153807	E. coli CCUG 51206
154010	E. coli CCUG 51965
154046	E. coli CCUG 52125
154081	E. coli CCUG 52305
154142	E. coli CCUG 52541
154143	E. coli CCUG 52542, NCTC 13351
154144	E. coli CCUG 52543, NCTC 13352
154145	E. coli CCUG 52544, NCTC 13353
154390	E. coli CCUG 53375
154502	E. coli CCUG 53931
154719	E. coli CCUG 54963
154764	E. coli CCUG 55121 A
154765	E. coli CCUG 55121 B
154766	E. coli CCUG 55122 A
154793	E. coli CCUG 55212
154809	E. coli CCUG 55295
154959	E. coli CCUG 55873
154968	E. coli CCUG 55893
154988	E. coli CCUG 55970
154989	E. coli CCUG 55971
154990	E. coli CCUG 55972
155194	E. coli CCUG 56866
155195	E. coli CCUG 56867
155545	E. coli CCUG 58078, BCRC 15947, ATCC 43887
155610	E. coli CCUG 58364
155628	E. coli CCUG 58537
155629	E. coli CCUG 58538
155630	E. coli CCUG 58539
155631	E. coli CCUG 58540
155632	E. coli CCUG 58541
155633	E. coli CCUG 58542
155634	E. coli CCUG 58543
155635	E. coli CCUG 58544
155683	E. coli CCUG 58983
155684	E. coli CCUG 58984
155685	E. coli CCUG 58985
155686	E. coli CCUG 58986
155687	E. coli CCUG 58987, ATCC 700926, ATCC 47076
155799	E. coli CCUG 59341
155800	E. coli CCUG 59342
155801	E. coli CCUG 59343
155802	E. coli CCUG 59344
155803	E. coli CCUG 59345
155804	E. coli CCUG 59346
155809	E. coli CCUG 59351
155810	E. coli CCUG 59352
155811	E. coli CCUG 59353
155812	E. coli CCUG 59354
155813	E. coli CCUG 59355
155814	E. coli CCUG 59356
155815	E. coli CCUG 59357
156346	E. coli CCUG 61240
156536	E. coli CCUG 62462
156578	E. coli CCUG 62975
156656	E. coli CCUG 63955
156686	E. coli CCUG 64139
156813	E. coli CCUG 65539
156814	E. coli CCUG 65540
156926	E. coli CCUG 67097
156939	E. coli NCTC 13476, CCUG 67180
157389	E. coli IMI 349014
157390	E. coli IMI 359689
157391	E. coli IMI 362054
157688	E. coli 15095 4596-1, DSM 101113
157689	E. coli 15095 5505-1, DSM 101114
157690	E. coli DSM 101121
157691	E. coli DSM 101124
157692	E. coli DSM 101126
157693	E. coli PTC E007, DSM 103242
157694	E. coli PTC E028, DSM 103246
157695	E. coli PTC E029, DSM 103247
157696	E. coli PTC E037, DSM 103248
157697	E. coli PTC E049, DSM 103249
157698	E. coli PTC E050, DSM 103250
157699	E. coli PTC E053, DSM 103251
157700	E. coli APEC 2248, DSM 103255
157701	E. coli APEC 2285, DSM 103256
157702	E. coli APEC 2293, DSM 103257
157703	E. coli APEC 2494, DSM 103259
157704	E. coli APEC 2540, DSM 103260
157705	E. coli APEC 4498, DSM 103261
157706	E. coli APEC 4500, DSM 103262
157707	E. coli APEC 4507, DSM 103263
157708	E. coli APEC 9062, DSM 103265
157709	E. coli 292792091, PEG-13-3-8, DSM 105372
157710	E. coli A14738, PEG-13-11-48, DSM 105373
157711	E. coli J-15270, PEG-13-20-22, DSM 105374
157712	E. coli PEG-13-20-13, S-31353, DSM 105375
157713	E. coli 130, PEG-13-49-74, DSM 105376
157714	E. coli PEG-13-34-74, va031895/2, DSM 105377
157715	E. coli NVK1 4444-2, PEG-13-26-69, DSM 105378
157716	E. coli NVK 11184-2, PEG-13-26-29, DSM 105379
157717	E. coli PEG-13-53-6, vk 48022, DSM 105380
157718	E. coli PEG-13-53-7, vk 49585, DSM 105381
157719	E. coli B13-083514, PEG-13-56-54, DSM 105382
157720	E. coli 70398460, PEG-13-72-56, DSM 105383
157721	E. coli 70400222, PEG-13-72-57, DSM 105384
157722	E. coli 70405816, PEG-13-72-60, DSM 105385
157723	E. coli A511515A, PEG-13-78-14, DSM 105386
157724	E. coli 6-13675, PEG-13-92-32, DSM 105387
157725	E. coli 1533423-4403-1, PEG-13-103-15, DSM 105388
157726	E. coli 1853068, PEG-13-105-37, DSM 105389
157727	E. coli PEG-13-5-24, AB 3405188, DSM 105390
157728	E. coli 93214076, PEG-13-20-51, DSM 105391
157729	E. coli 196-029545, PEG-13-38-44, DSM 105392
157730	E. coli 34715148, PEG-13-87-17, DSM 105393
157731	E. coli 123794, DSM 106555
157732	E. coli 123789, DSM 106556
157733	E. coli 123738, DSM 106557
157734	E. coli 123745, DSM 106579
157735	E. coli MBT-E05, DSM 106624
157736	E. coli B2032/82 serotype K1, DSM 107164
157737	E. coli M2, DSM 107752
157738	E. coli M25, DSM 107753
157739	E. coli AW1.7, DSM 108612
158939	E. coli 15095 8246-1, DSM 101112
158940	E. coli 15085 4431, DSM 101133
158941	E. coli 15085 5679, DSM 101139
158942	E. coli PTC E018, DSM 103245
158943	E. coli APEC 2133, DSM 103254
158944	E. coli APEC 2469, DSM 103258
158945	E. coli APEC 10400, DSM 103266
158946	E. coli TolC, DSM 104619
158947	E. coli McC-252-APC-1B1, DSM 106279
158948	E. coli O145:H28/E.coliA3, O145:H28 / E. coli A3, ...
160039	E. coli 10674229 BWKH 283, DSM 112522
160040	E. coli 10665326 BWKH 282, DSM 112521
160041	E. coli 10684729 BWKH 281, DSM 112520
160042	E. coli 10665312 BWKH 280, DSM 112519
160043	E. coli BL21(DE3) pRham hIL-10L-H Klon 2, BL21(DE3) ...
160044	E. coli BL21(DE3) pAZ1LT7 Klon 81, BL21(DE3) pAZ1LT7 ...
160045	E. coli BWKH 235, DSM 111036
160046	E. coli BWKH 288, DSM 111506
160047	E. coli BWKH 350, DSM 111509
160048	E. coli BWKH 336, DSM 111510
160049	E. coli BWKH 368, DSM 111511
160050	E. coli 10675817 BWKH 265, DSM 112481
160051	E. coli 10679905 BWKH 278, DSM 112482
160052	E. coli 10665402 BWKH 279, DSM 112483
160053	E. coli 10684313, BWKH 266, DSM 112484
160054	E. coli 10672678, BWHK 267, DSM 112485
160055	E. coli 10684009 BWKH 284, DSM 112557
160056	E. coli 10679934 BWKH 285, DSM 112558
160057	E. coli 10687628 BWKH 286, DSM 112559
160058	E. coli 10684921 BWKH 287, DSM 112560
160059	E. coli 10685049 BWKH 289, DSM 112565
160060	E. coli 10685079 BWKH 290, DSM 112566
160061	E. coli 19003629 BWKH 268, DSM 112594
160062	E. coli 10684137 BWKH 269, DSM 112595
160063	E. coli 10665303 BWKH 270, DSM 112614
160064	E. coli 10665131 BWKH 271, DSM 112615
160065	E. coli 19003501 BWKH 272, DSM 112616
160542	E. coli PTC E017, DSM 103244
161246	E. coli JCM 1246
161823	E. coli JCM 16574
161824	E. coli JCM 16575
162727	E. coli JCM 20071, IAM 1137
162763	E. coli JCM 20114, IAM 1222
162770	E. coli JCM 20123, ATCC 11246, IAM 1239, IFO 3806, ...
162778	E. coli JCM 20135, ATCC 10798, BCRC 10362, BCRC 12569, ...
162887	E. coli JCM 20349, IAM 12016, IFO 3545, NBRC 3545
162888	E. coli JCM 20350, IAM 12017
162889	E. coli JCM 20351, IAM 12018
162901	E. coli JCM 20375, ATCC 15490, IAM 12057
162902	E. coli JCM 20376, ATCC 15491, IAM 12058
162903	E. coli JCM 20377, ATCC 15489, IAM 12060
162909	E. coli JCM 20391, IAM 12083
162910	E. coli JCM 20392, IAM 12084
164069	E. coli JCM 31464
165141	E. coli JCM 5263
165348	E. coli JCM 6127, ATCC 884, NRRL B-409
165809	E. coli JCM 8537, ATCC 15289
169224	E. coli APEC 5211, DSM 103264
169225	E. coli BWKH 314, DSM 111507
169226	E. coli CLA-AP-6, DSM 112109
169227	E. coli CLA-AP-7, DSM 112110
169228	E. coli CLA-AP-8, DSM 112111
169229	E. coli CLA-AP-9, DSM 112112
169230	E. coli CLA-AP-10, Cla-AP10, Cla_AP_10, DSM 112113
169231	E. coli CLA-AP-11, DSM 112114
169232	E. coli CLA-AP-14, DSM 112116
169233	E. coli Ec2842, DSM 112117
169234	E. coli Ec3550, DSM 112118
169235	E. coli Ec3920, DSM 112119
169236	E. coli Ec4221, DSM 112120
169237	E. coli Ec7384, DSM 112121
169238	E. coli Ec8178, DSM 112122
169239	E. coli Ec8850, DSM 112123
169240	E. coli EcTv10, DSM 112124
169241	E. coli EcSiggi, DSM 112125
169242	E. coli Janvier 1a, DSM 112126
169243	E. coli Charles River B11, DSM 112127
169244	E. coli ß2155, DSM 113367
172320	E. coli CIMB 05-0759, CRBIP17.71
172321	E. coli TSW 00850, DEC3a, CIP 107189, CDC 3299-85
172322	E. coli 000204C, CIP 107871
172323	E. coli P11-4522, 2011/04963, Ec11-4522, CIP 110346
172324	E. coli H Hfr, CIP 65.33
172325	E. coli EDL 931, CIP 103571, ATCC 35150
172326	E. coli E30480, CIP 105180, NCTC 12079, WDCM 00093, ...
172327	E. coli 96-1424, CIP 105212
172328	E. coli 96-1243, CIP 105213
172329	E. coli I-5, CIP 105283
172330	E. coli AB219, CIP 106476, CGSC 219
172331	E. coli C600, CRBIP19.1
172332	E. coli W3110, CRBIP19.10
172333	E. coli CRBIP19.100
172334	E. coli CRBIP19.101
172335	E. coli CRBIP19.102
172336	E. coli CRBIP19.103
172337	E. coli CRBIP19.104
172338	E. coli CRBIP19.105
172339	E. coli CRBIP19.106
172340	E. coli CRBIP19.107
172341	E. coli CRBIP19.108
172342	E. coli CRBIP19.109
172343	E. coli CRBIP19.11
172344	E. coli CRBIP19.110
172345	E. coli CRBIP19.111
172346	E. coli CRBIP19.112
172347	E. coli CRBIP19.113
172348	E. coli CRBIP19.114
172349	E. coli CRBIP19.115
172350	E. coli CRBIP19.116
172351	E. coli CRBIP19.117
172352	E. coli CRBIP19.118
172353	E. coli CRBIP19.119
172354	E. coli C600F'tet, CRBIP19.12
172355	E. coli CRBIP19.120
172356	E. coli CRBIP19.121
172357	E. coli CRBIP19.122
172358	E. coli CRBIP19.123
172359	E. coli CRBIP19.124
172360	E. coli CRBIP19.125
172361	E. coli CRBIP19.126
172362	E. coli CRBIP19.127
172363	E. coli CRBIP19.128
172364	E. coli CRBIP19.129
172365	E. coli MG1655-Str, CRBIP19.13
172366	E. coli CRBIP19.130
172367	E. coli CRBIP19.131
172368	E. coli CRBIP19.132
172369	E. coli CRBIP19.133
172370	E. coli CRBIP19.134
172371	E. coli CRBIP19.135
172372	E. coli CRBIP19.136
172373	E. coli CRBIP19.137
172374	E. coli CRBIP19.138
172375	E. coli CRBIP19.139
172376	E. coli MG1655.F'tetsure, CRBIP19.14
172377	E. coli TG1_Faad7-araC-pBADccdB_?ccdA, CRBIP19.140
172378	E. coli TG1_Fcat-araC-pBADccdB_?ccdA, CRBIP19.141
172379	E. coli MG1655?lacI-Z?frt, CRBIP19.142
172380	E. coli CRBIP19.143
172381	E. coli CRBIP19.144
172382	E. coli CRBIP19.145
172383	E. coli MG1655catRExBADlacZ, CRBIP19.146
172384	E. coli MG1655catBADflu, CRBIP19.147
172385	E. coli CRBIP19.148
172386	E. coli CRBIP19.149
172387	E. coli MG1655-N, CRBIP19.15
172388	E. coli CRBIP19.150
172389	E. coli CRBIP19.151
172390	E. coli CRBIP19.152
172391	E. coli CRBIP19.153
172392	E. coli CRBIP19.154
172393	E. coli CRBIP19.155
172394	E. coli MG1655catRExBADypjA, CRBIP19.156
172395	E. coli MG1655catRExBADyfaL, CRBIP19.157
172396	E. coli MG1655catRExBADycgH, CRBIP19.158
172397	E. coli MG1655catRExBADydhQ, CRBIP19.159
172398	E. coli MG1655-SN, CRBIP19.16
172399	E. coli MG1655catRExBADycgV, CRBIP19.160
172400	E. coli MG1655catRExBADydeKU, CRBIP19.161
172401	E. coli MG1655catRExBADyeeJ, CRBIP19.162
172402	E. coli CRBIP19.163
172403	E. coli MG1655rfaH, CRBIP19.164
172404	E. coli CRBIP19.165
172405	E. coli CRBIP19.166
172406	E. coli CRBIP19.167
172407	E. coli CRBIP19.168
172408	E. coli CRBIP19.169
172409	E. coli MG1655-SNR, CRBIP19.17
172410	E. coli CRBIP19.171
172411	E. coli CRBIP19.172
172412	E. coli CRBIP19.173
172413	E. coli 536stpA, CRBIP19.174
172414	E. coli 536hns, CRBIP19.175
172415	E. coli CRBIP19.176
172416	E. coli CRBIP19.177
172417	E. coli CRBIP19.178
172418	E. coli CRBIP19.179
172419	E. coli MG1655-NR, CRBIP19.18
172420	E. coli CRBIP19.180
172421	E. coli TG1_Faad7-araC-pBADccdB_?ccdA, CRBIP19.181
172422	E. coli 1094, CRBIP19.182
172423	E. coli CRBIP19.183
172424	E. coli CRBIP19.184
172425	E. coli CRBIP19.185
172426	E. coli CRBIP19.186
172427	E. coli CRBIP19.187
172428	E. coli CRBIP19.188
172429	E. coli CRBIP19.189
172430	E. coli MG1655-SRN, CRBIP19.19
172431	E. coli CRBIP19.190
172432	E. coli 1125, CRBIP19.191
172433	E. coli CRBIP19.192
172434	E. coli CRBIP19.193
172435	E. coli CRBIP19.194
172436	E. coli CRBIP19.195
172437	E. coli CRBIP19.196
172438	E. coli 55989, CRBIP19.199
172439	E. coli CRBIP19.20
172440	E. coli CRBIP19.206
172441	E. coli PHL818, CRBIP19.207
172442	E. coli CRBIP19.208
172443	E. coli W3110.F'tet.ompA, CRBIP19.21
172444	E. coli KS272, CRBIP19.212, ATCC 47091
172445	E. coli 1096, CRBIP19.215
172446	E. coli 1097, CRBIP19.216
172447	E. coli 1102, CRBIP19.217
172448	E. coli 1103, CRBIP19.218
172449	E. coli 1110, CRBIP19.219
172450	E. coli MG1655.pOX38, CRBIP19.22
172451	E. coli 1127, CRBIP19.220
172452	E. coli UPEC_105.170.0471, CRBIP19.221
172453	E. coli UPEC_105.169.0341, CRBIP19.222
172454	E. coli UPEC_105.170.0941, CRBIP19.223
172455	E. coli UPEC_105.169.1181, CRBIP19.224
172456	E. coli UPEC_105.169.0011, CRBIP19.225
172457	E. coli UPEC_105.171.0131, CRBIP19.226
172458	E. coli UPEC_105.167.0481, CRBIP19.227
172459	E. coli UPEC_105.171.0941, CRBIP19.228
172460	E. coli UPEC_105.171.1901, CRBIP19.229
172461	E. coli TG1.F'tet, CRBIP19.23
172462	E. coli UPEC_105.171.0831, CRBIP19.230
172463	E. coli CRBIP19.231
172464	E. coli UPEC_105.168.1271, CRBIP19.232
172465	E. coli UPEC_105.167.0771, CRBIP19.233
172466	E. coli UPEC_105.166.0501, CRBIP19.234
172467	E. coli UPEC_105.165.1351, CRBIP19.235
172468	E. coli UPEC_105.165.0951, CRBIP19.237
172469	E. coli UPEC_105.165.1441, CRBIP19.238
172470	E. coli UPEC_105.165.2001, CRBIP19.239
172471	E. coli TG1.F'sure, CRBIP19.24
172472	E. coli UPEC_105.164.1101, CRBIP19.240
172473	E. coli UPEC_105.164.0881, CRBIP19.241
172474	E. coli CRBIP19.242
172475	E. coli CRBIP19.243
172476	E. coli CRBIP19.244
172477	E. coli CRBIP19.245
172478	E. coli CRBIP19.246
172479	E. coli MG1655F'lac, CRBIP19.25
172480	E. coli CRBIP19.250
172481	E. coli CRBIP19.251
172482	E. coli CRBIP19.252
172483	E. coli CRBIP19.253
172484	E. coli CRBIP19.254
172485	E. coli CFT073_?3692, CRBIP19.255
172486	E. coli CFT073_?3693, CRBIP19.256
172487	E. coli CFT073_?3694, CRBIP19.257
172488	E. coli CRBIP19.258
172489	E. coli CRBIP19.259
172490	E. coli CFT073_?attgfp_?kpsR1, CRBIP19.260
172491	E. coli CFT073_?attgfp_?kpsR2, CRBIP19.261
172492	E. coli CFT073_?luxS, CRBIP19.262
172493	E. coli CRBIP19.263
172494	E. coli U-9 ?kpsD, CRBIP19.264
172495	E. coli U-15 ?kpsD, CRBIP19.265
172496	E. coli BM21.F'tet, CRBIP19.27
172497	E. coli CRBIP19.271
172498	E. coli CFT073gfp, CRBIP19.272
172499	E. coli MG1655_PcLKmflu, CRBIP19.273
172500	E. coli 1094KmRExTETrbs-bcsA, CRBIP19.274
172501	E. coli MG1655_Z1, CRBIP19.275
172502	E. coli MG1655_KmRExTETrbs-flu, CRBIP19.276
172503	E. coli CRBIP19.277
172504	E. coli MG1655_PcLKm-rbslacZ, CRBIP19.278
172505	E. coli MG1655_PcLKm-lacZ, CRBIP19.279
172506	E. coli MG1655_PcLamp-rbslacZ, CRBIP19.280
172507	E. coli MG1655_PcLamp-lacZ, CRBIP19.281
172508	E. coli MG1655_?ATT:Amp-GFPmut3, CRBIP19.282
172509	E. coli DH5?Z1, CRBIP19.283
172510	E. coli pZEtetR21-gfp, CRBIP19.284
172511	E. coli pZE2R-gfp, CRBIP19.285
172512	E. coli pZE1R-gfp, CRBIP19.286
172513	E. coli XL1pAg43, CRBIP19.287
172514	E. coli CRBIP19.288
172515	E. coli CRBIP19.289
172516	E. coli BM21.pIP24, CRBIP19.29
172517	E. coli CRBIP19.290
172518	E. coli CFT073_KmPcLc1273, CRBIP19.291
172519	E. coli CRBIP19.292
172520	E. coli CFT073_ampPcLc3655, CRBIP19.293
172521	E. coli CFT073_Km1273amp3655, CRBIP19.295
172522	E. coli CRBIP19.296
172523	E. coli CRBIP19.297
172524	E. coli CRBIP19.298
172525	E. coli CRBIP19.299
172526	E. coli BL21, CRBIP19.3
172527	E. coli BM21.R64, CRBIP19.30
172528	E. coli CRBIP19.300
172529	E. coli CFT073_pCO2, CRBIP19.301
172530	E. coli CFT073_pCO3, CRBIP19.302
172531	E. coli CFT073_pCO4, CRBIP19.303
172532	E. coli CRBIP19.304
172533	E. coli CRBIP19.305
172534	E. coli MG1655_ilvG+, CRBIP19.306
172535	E. coli CRBIP19.307
172536	E. coli CRBIP19.308
172537	E. coli CRBIP19.309
172538	E. coli CRBIP19.310
172539	E. coli CRBIP19.311
172540	E. coli CRBIP19.312
172541	E. coli CRBIP19.313
172542	E. coli CFT073_pMM100_pSM11, CRBIP19.314
172543	E. coli MG1655_pMM100_pSM11, CRBIP19.315
172544	E. coli CRBIP19.316
172545	E. coli CRBIP19.317
172546	E. coli CRBIP19.32
172547	E. coli CRBIP19.324
172548	E. coli BM21.R702, CRBIP19.35
172549	E. coli CRBIP19.36
172550	E. coli CRBIP19.37
172551	E. coli BM21.R391, CRBIP19.39
172552	E. coli BM21.TP114, CRBIP19.40
172553	E. coli BM21.TP116, CRBIP19.41
172554	E. coli BM21.pIP72, CRBIP19.42
172555	E. coli BM21.Rts1, CRBIP19.43
172556	E. coli pUCcpxP, CRBIP19.44
172557	E. coli BM21.pIP175, CRBIP19.46
172558	E. coli BM21.RIP71a, CRBIP19.47
172559	E. coli BM21.pIP1100, CRBIP19.48
172560	E. coli BM21.R6K, CRBIP19.49
172561	E. coli BM21.RN3, CRBIP19.54
172562	E. coli BM21.RP4, CRBIP19.55
172563	E. coli BM21.Rsa, CRBIP19.56
172564	E. coli MG1655-s-R388, CRBIP19.57
172565	E. coli BM21-s R1, CRBIP19.58
172566	E. coli BM21-s R1drd19, CRBIP19.59
172567	E. coli KS272, CRBIP19.6, ATCC 47091
172568	E. coli TG1pKOBAPRA, CRBIP19.60
172569	E. coli pKOBEGA, CRBIP19.61
172570	E. coli pKOBEG, CRBIP19.62
172571	E. coli MG1655_?ATT, CRBIP19.63
172572	E. coli CRBIP19.64
172573	E. coli TG1??KCP, CRBIP19.65
172574	E. coli TG1_CAT-araC-pBAD, CRBIP19.66
172575	E. coli CRBIP19.67
172576	E. coli MG1655_?ATT:Km-GFPmut3, CRBIP19.68
172577	E. coli MG1655_tetR-Km-ptet, CRBIP19.69
172578	E. coli MC4100, CRBIP19.7
172579	E. coli CRBIP19.70
172580	E. coli TG1_aad7-araC-pBAD, CRBIP19.71
172581	E. coli TG1_uidA-zeo, CRBIP19.72
172582	E. coli CRBIP19.73
172583	E. coli TG1_ZEO_araC, CRBIP19.74
172584	E. coli CRBIP19.75
172585	E. coli CRBIP19.76
172586	E. coli CRBIP19.77
172587	E. coli CRBIP19.78
172588	E. coli CRBIP19.79
172589	E. coli TG1-F-, CRBIP19.8
172590	E. coli CRBIP19.81
172591	E. coli CRBIP19.82
172592	E. coli CRBIP19.83
172593	E. coli CRBIP19.84
172594	E. coli CRBIP19.85
172595	E. coli TG1_?ATT-GFP, CRBIP19.86
172596	E. coli CRBIP19.87
172597	E. coli CRBIP19.88
172598	E. coli CRBIP19.89
172599	E. coli CRBIP19.90
172600	E. coli CRBIP19.91
172601	E. coli CRBIP19.92
172602	E. coli CRBIP19.93
172603	E. coli CRBIP19.94
172604	E. coli CRBIP19.95
172605	E. coli CRBIP19.96
172606	E. coli CRBIP19.97
172607	E. coli CRBIP19.98
172608	E. coli CRBIP19.99
172609	E. coli 11097, CRBIP14.10
172610	E. coli 381A, CRBIP14.12
172611	E. coli H19, CRBIP14.13
172612	E. coli EDL931, CRBIP14.14
172613	E. coli EDL1493, CRBIP14.16
172614	E. coli 440TL, CRBIP14.17
172615	E. coli A30, CRBIP14.19
172616	E. coli C1845, CRBIP14.20
172617	E. coli IH11128, CRBIP14.21
172618	E. coli CFT073, CRBIP14.23, CRBIP19.211
172619	E. coli 536, CRBIP14.24, CRBIP19.170
172620	E. coli RS218, CRBIP14.25
172621	E. coli IHE3034, CRBIP14.26, CRBIP19.247
172622	E. coli A22, CRBIP14.28
172623	E. coli AL851, CRBIP14.29
172624	E. coli JM221, CRBIP14.3
172625	E. coli AL862, CRBIP14.30
172626	E. coli AAEC185, CRBIP14.31
172627	E. coli AL05, CRBIP14.32
172628	E. coli AL11, CRBIP14.33
172629	E. coli AL524, CRBIP14.34
172630	E. coli AL52, CRBIP14.35
172631	E. coli AL499, CRBIP14.36
172632	E. coli AL43, CRBIP14.38
172633	E. coli AL213, CRBIP14.39
172634	E. coli MC1061(pill14), CRBIP14.40
172635	E. coli HB101(pill1151), CRBIP14.41
172636	E. coli HB101(pill1226), CRBIP14.43
172637	E. coli C1845, CRBIP14.47
172638	E. coli 55989, CRBIP14.5
172639	E. coli 56390, CRBIP14.6
172640	E. coli 645125, CRBIP14.7
172641	E. coli 384P, CRBIP14.8
172642	E. coli 11006, CRBIP14.9
172643	E. coli MFDpir, UGB3093, CRBIP19.334
172644	E. coli BM2710, CIP 111120
172645	E. coli BM2711, CIP 111126
172646	E. coli BM2710/pGB2?inv-hly, pSG42, CIP 111129, PAT ...
172647	E. coli NR698 = MC 4100 imp4213, CIP 111272
172648	E. coli 36, CIP 55.30
172649	E. coli TW 01286, CI 520-77, DEC4a, CIP 107190
172650	E. coli UAA 1493, 08-00, CIP 111633
172651	E. coli TW 02294, H30, DEC10a, CIP 107196
172652	E. coli E32511, CIP 105181, NCTC 12080, WDCM 00094, ...
174440	E. coli J53-1 (pFBAOT6), DSM 18377
174441	E. coli Cla_AP_12, DSM 112115
174442	E. coli BWKH 373, DSM 115194
174443	E. coli BWKH 374, DSM 115195
174444	E. coli BWKH 375, DSM 115196
174445	E. coli BWKH 376, DSM 115197
174446	E. coli BWKH 377, DSM 115198
174447	E. coli BWKH 378, DSM 115199
174448	E. coli BWKH 379, DSM 115211
174449	E. coli BWKH 380, DSM 115212
174450	E. coli BWKH 381, DSM 115213
174451	E. coli BWKH 382, DSM 115214
174452	E. coli BWKH 383, DSM 115215
174453	E. coli BWKH 384, DSM 115216
174454	E. coli BWKH 385, DSM 115217
174455	E. coli BWKH 386, DSM 115218
174456	E. coli TX 2435, DSM 115739
174457	E. coli TX 2355, DSM 115743
174458	E. coli TX 2001, DSM 115746
174459	E. coli TX 3057, DSM 115748
174460	E. coli TX 3290, DSM 115749
174461	E. coli 2844, TX 2844, DSM 117617
174462	E. coli 2957, DSM 117912
174463	E. coli 3032 Biotyp II PZT=R, TX 3032, DSM 117915
174464	E. coli 4763, DSM 118270
176431	E. coli Nissle 1917 (T7); EcNT7, DSM 115365
176432	E. coli DATC, DSM 116187
176433	E. coli BfR-CA-15777 (IPC-ntb2), DSM 116329
176434	E. coli 6133, DSM 118506
176435	E. coli 6171, DSM 118507
176436	E. coli DSM 119277, DSM 6897=CCRC 51731=K12 DH5alpha ...
176437	E. coli 9000, DSM 119323
176438	E. coli 9044, DSM 119324
176439	E. coli 9251, DSM 119325
176440	E. coli 9269, DSM 119326
176441	E. coli 9199, DSM 119327
176442	E. coli 9271, DSM 119328
176443	E. coli PA16, DSM 119899

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
118688	negative	rod-shaped
125438	negative			99.75

Multimedia

@ref:	66793
multimedia content:	EM_DSM_30083_1.jpg
multimedia.multimedia content:	EM_DSM_30083_1.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

@ref:	66793
multimedia content:	EM_DSM_30083_2.jpg
multimedia.multimedia content:	EM_DSM_30083_2.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

@ref:	66793
multimedia content:	EM_DSM_30083_3.jpg
multimedia.multimedia content:	EM_DSM_30083_3.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

@ref:	66793
multimedia content:	EM_DSM_30083_4.jpg
multimedia.multimedia content:	EM_DSM_30083_4.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

@ref:	66793
multimedia content:	EM_DSM_30083_5.jpg
multimedia.multimedia content:	EM_DSM_30083_5.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

@ref:	66793
multimedia content:	EM_DSM_30083_6.jpg
multimedia.multimedia content:	EM_DSM_30083_6.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

@ref:	66793
multimedia content:	EM_DSM_30083_7.jpg
multimedia.multimedia content:	EM_DSM_30083_7.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
9115	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
9115	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
38566	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
118688	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
9115	positive	growth	37
38566	positive	growth	30
67770	positive	growth	37
67772	positive	optimum	37
118688	positive	growth	10-41
118688	negative	growth	5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
118688	facultative anaerobe
125439	obligate aerobe	95.2

Antibiotic susceptibility testing

	Test 1	Test 2	Test 3	Test 4	Test 5	Test 6	Test 7	Test 8	Test 9
@ref	9115	9115	9115	9115	9115	9115	9115	9115	9115
Medium	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Müller-Hinton Agar
Manual annotation	1	1	1	1	1	1	1	1	1
	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm
Amikacin 30µg (disc)	22	22-24	24	22	14	22	22	22	22
Ampicillin 10µg (disc)	20	20	18-20	20	14	18	18	18	22-24
Aztreonam 30µg (disc)	34	36	36	36-38	24	32	32	34	38
Bacitracin 10Unit	0	0	0	0	0	0	0	0	n.d.
Cefalotin 30µg (disc)	18	18	18	20	12	18	18	18-20	n.d.
Cefazolin 30µg (disc)	26	28	26-28	28-30	18	24-26	24-26	28	n.d.
Cefiderocol 30µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	36
Cefotaxime 30µg (disc)	34-36	36	38	36-38	24	32	32	34-36	38
Ceftazidime 10µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	32
Ceftriaxone 30µg (disc)	32	32	34	34-36	n.d.	30	30	34	36
Chloramphenicol 30µg (disc)	28-30	30	30	26	18-20	28	28	30	28-30
Ciprofloxacin 5µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	46
Clindamycin 10µg (disc)	0	0	0	0	n.d.	0	0	6	0
Colistin 10µg (disc)	14	14	14	14-16	8	14	14	12	n.d.
Colistin sulphate 10µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	16
Doxycycline 30µg (disc)	22	20-22	22	22	16	20	20	22	n.d.
Erythromycin 15µg (disc)	8-10	10	10	10	6	10	10	8	10
Fosfomycin 50µg (disc)	30-32	32	28-30	32	n.d.	30	30	32-34	26
Gentamicin 30µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	22
Gentamycin 10µg (disc)									n.d.
Imipenem 10µg (disc)	30-32	32	34	34	22	30	30	32	32
Kanamycin 30µg (disc)	20	20-22	24	22	16	22	22	20	24
Levofloxacin 5µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	44
Lincomycin 15µg (disc)	0	0	0	0	0	0	0	0	n.d.
Linezolid 10µg (disc)	0	0	0	0	n.d.	0	0	0	0
Meropenem 10µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	36
Mezlocillin 30µg (disc)	26	26	26	28	18	24	24	24-26	n.d.
Moxifloxacin 5µg (disc)	32-34	34	34	32-34	n.d.	32	32	34	38-40
Neomycin 30µg (disc)	18	16-18	20	20	14	18	18	18	n.d.
Nitrofurantoin 100µg (disc)	24	24-26	26	28	16	24	24	24-26	24-26
Norfloxacin 10µg (disc)	36-38	40	38	38-40	22	34-36	34-36	38-40	n.d.
Nystatin 100Unit	0	0	0	0	n.d.	0	0	0	n.d.
Ofloxacin 5µg (disc)	32-34	32-34	34	32-34	22	32	32	38	40
Oxacillin 5µg (disc)	0	0	0	0	0	0	0	0	0
Penicillin G 6µg (disc)	0	0	0	0	0	0	0	0	0
Pipemidic acid 20µg (disc)	26	40	28	30	22	26	26	28	n.d.
Piperacillin/Tazobactam 40µg (disc)	26	26-28	26	28	n.d.	24	24	26	n.d.
Piperacillin/Tazobactam 110µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	32
Polymyxin B 300Unit	16	14	14-16	16	10	14-16	14-16	16	18
Quinupristin/Dalfopristin 15µg (disc)	0	0	0	0	n.d.	0	0	0	0
Rifampicin 5µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	8-10
Teicoplanin 30µg (disc)	0	0	0	0	n.d.	0	0	0	0
Tetracycline 30µg (disc)	26-28	26	28	26-28	20	22	22	26-28	28-30
Ticarcillin 75µg (disc)	30	32	30	30	22	28	28	30	32
Tigecycline 15µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	28
Trimethoprim-sulfamethoxazole (1:19) 10µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	30
Vancomycin 30µg (disc)	6	8	0	0	0	0	0	0	0

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68368	27613 ChEBI	amygdalin	-	fermentation	from API 20E
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
118688	16947 ChEBI	citrate	-	carbon source
68368	16947 ChEBI	citrate	-	assimilation	from API 20E
68371	17108 ChEBI	D-arabinose	+	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68368	17634 ChEBI	D-glucose	+	fermentation	from API 20E
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68368	16899 ChEBI	D-mannitol	+	fermentation	from API 20E
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	+	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	+	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
118688	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
118688	17234 ChEBI	glucose	+	fermentation
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68368	30849 ChEBI	L-arabinose	+	fermentation	from API 20E
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	+	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	+	builds acid from	from API 50CH acid
68368	62345 ChEBI	L-rhamnose	+	fermentation	from API 20E
68371	17266 ChEBI	L-sorbose	+	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
118688	17716 ChEBI	lactose	+	fermentation
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
118688	15792 ChEBI	malonate	-	assimilation
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
118688	29864 ChEBI	mannitol	+	fermentation
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68368	28053 ChEBI	melibiose	+	fermentation	from API 20E
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68368	17268 ChEBI	myo-inositol	-	fermentation	from API 20E
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
118688	17632 ChEBI	nitrate	+	reduction
68368	17632 ChEBI	nitrate	+	reduction	from API 20E
118688	16301 ChEBI	nitrite	+	reduction
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
118688	132112 ChEBI	sodium thiosulfate	-	builds gas from
68368	30911 ChEBI	sorbitol	+	fermentation	from API 20E
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68368	17992 ChEBI	sucrose	-	fermentation	from API 20E
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68368	27897 ChEBI	tryptophan	+	energy source	from API 20E
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	ChEBI	Metabolite	Resistance conc.
118688		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
9115	28669	Bacitracin	10 Unit	from Antibiotic test
9115	6472	Lincomycin	15 µg (disc)	from Antibiotic test
9115	63607	Linezolid	10 µg (disc)	from Antibiotic test
9115	7660	Nystatin	100 Unit	from Antibiotic test
9115	7809	Oxacillin	5 µg (disc)	from Antibiotic test
9115	18208	Penicillin G	6 µg (disc)	from Antibiotic test
9115		Quinupristin/Dalfopristin	15 µg (disc)	from Antibiotic test
9115	29687	Teicoplanin	30 µg (disc)	from Antibiotic test

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
118688	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E
68368	16301 ChEBI	nitrite	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
118688	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	-			from API 20E
118688	17234 ChEBI	glucose		+
68368	35581 ChEBI	indole			+	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
118688	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68382	beta-galactosidase	+	3.2.1.23	from API zym
118688	beta-galactosidase	+	3.2.1.23
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	+	3.2.1.31	from API zym
118688	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68368	cytochrome oxidase	-	1.9.3.1	from API 20E
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
118688	gelatinase	-
68368	gelatinase	-		from API 20E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
118688	lysine decarboxylase	+	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
118688	ornithine decarboxylase	+	4.1.1.17
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
118688	oxidase	-
68382	trypsin	+	3.4.21.4	from API zym
118688	tryptophan deaminase	-
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
118688	urease	-	3.5.1.5
68368	urease	-	3.5.1.5	from API 20E
68382	valine arylamidase	+		from API zym

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
9115	+	-	+	+	-	-	-	-	+	-	-	+	+	-	+	+	-	+	-	+	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
9115	+	-	+	+	-	-	-	-	+	-	-	+	+	-	+	+	-	+	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
9115	+	-	+/-	+	-	-	-	-	+	-	-	+	+	-	+	+	-	+	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
9115	+	-	+	+	-	-	-	-	+	-	-	+	+	-	+	+	-	+	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
9115	+	-	+	+	-	-	-	-	+	-	-	+	+	-	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
9115	+	-	+	+	-	-	-	-	+	-	-	+	+	-	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
9115	+	-	+	+	-	-	-	-	+	-	-	+	+	-	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
9115	+	-	+	+	-	-	-	-	+	-	-	+	+	-	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
9115	+	-	+	+	-	-	-	-	+	-	-	+	+	-	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
9115	+	-	+	+	-	-	-	-	+	-	-	+	+	-	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
118688	-	+	-	-	-	+	+	-	+	-	+	+	-	+	+	-	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
9115	-	+	-	+	+	+	-	-	-	-	+	+	+	+	+	+	-	-	+	+	-	-	+	-	-	-	+	-	+	+	+	-	+	-	-	-	-	-	-	+	-	-	+	-	+	-	-	+	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
118688	not determinedn.d.	+	+	+	+	+	+	+	-	-	+	+	+	+	+	+	-	+	+	+	+	+	-	-	+	+	-	-	-	-	-	+	+	-	+	-	-	+	-	+	-	-	-	-	+	+	+	-	-	+	+	-	-	-	-	+	+	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	+	-	-	-	+	-	+	+	-	-	+	+	+	-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Fluids	#Urine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date	Sampling date
9115	urine
67770	Urine
67772	Urine						1991
118688	Human, Urine	Copenhagen	Denmark	DNK	Europe	1952

Taxonmaps

69479

Global distribution of 16S sequence LC069032 (>99% sequence identity) for Enterobacteriaceae from Microbeatlas

Aquatic Samples	5613
Soil Samples	2111
Animal Samples	88071
Plant Samples	1835
Total Samples	97630

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9115	2	Risk group (German classification) According to TRBA 466
67772	2
118688	2	Risk group (French classification) According to TRBA 466

Phages

@ref	Name	Strain number
124042	Escherichia phage T4 (Escherichia virus T4)	DSM 30083
124042	Escherichia phage T3 (Escherichia virus T7)	DSM 30083
124042	Escherichia phage T6 (Escherichia virus T4)	DSM 30083
124042	Escherichia phage T7 (Escherichia virus T7)	DSM 30083
124042	Escherichia phage T1 (Escherichia virus T1)	DSM 30083
124042	Escherichia phage T2 (Escherichia virus T4)	DSM 30083
124042	Escherichia phage T5 (Escherichia virus T5)	DSM 30083
124042	Escherichia phage vB_EcoP-PT-JD01	DSM 30083
124042	Escherichia phage vB_EcoS-PT-JD02	DSM 30083

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM369716v2 assembly for Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775	complete	GCA_003697165	866789.18	2897341779	866789	98.65
66792	ASM69081v1 assembly for Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775	scaffold	GCA_000690815	866789.6	2528311135	866789	78.36
66792	ASM2451939v1 assembly for Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775	scaffold	GCA_024519395	866789.29		866789	52.39
66792	ASM73495v1 assembly for Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775	contig	GCA_000734955	866789.7	2588253787	866789	51.89
66792	ASM61326v1 assembly for Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775	contig	GCA_000613265	866789.5	2574180325	866789	21.65
67770	27731_A01 assembly for Escherichia coli NCTC9001	contig	GCA_900706755			562	13.58
66792	NCTC9001 assembly for Escherichia coli	complete	GCA_001562575		2687453512	562

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	E.coli (ATCC 11775T) gene for 16S rRNA	X80725	1450	866789
20218	Escherichia coli strain DSM 30083 16S ribosomal RNA gene, partial sequence	HQ012019	936	866789
20218	Escherichia coli gene for 16S ribosomal RNA, partial sequence, strain: JCM1649	AB242910	1110	866789
20218	Escherichia coli strain KCTC 2441 16S ribosomal RNA gene, partial sequence	EU014689	1541	562
20218	Escherichia coli gene for 16S rRNA, partial sequence, strain: NBRC 102203	AB681728	1467	562
67770	Escherichia coli gene for 16S ribosomal RNA, partial sequence, strain: JCM 1649	LC069032	1464	562
124043	Escherichia coli strain SAM-14 16S ribosomal RNA gene, partial sequence.	KJ668602	1280	562
124043	Escherichia coli strain NBRC 102203 16S ribosomal RNA gene, partial sequence.	MN527275	491	562
124043	Escherichia coli strain NBRC 102203 16S ribosomal RNA gene, partial sequence.	MN535394	491	562
124043	Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 16S ribosomal RNA gene, partial sequence.	OR853724	1450	866789
124043	Escherichia coli strain ATCC 11775(T) 16S ribosomal RNA gene, partial sequence.	KY048445	539	562
124043	Escherichia coli strain BIU GLSF4 16S ribosomal RNA gene, partial sequence.	MN545860	410	562
124043	Escherichia coli strain NBRC 102203 16S ribosomal RNA gene, partial sequence.	MG566069	678	562
124043	Escherichia coli strain NBRC 102203 16S ribosomal RNA gene, partial sequence.	MN252371	432	562

GC content

@ref	GC-content (mol%)	Method
67770	49.2	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775
PATRIC: 866789.18

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	79.60	no
125439	motility	BacteriaNetⓘ	yes	58.60	no
125439	gram_stain	BacteriaNetⓘ	negative	70.10	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	95.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 ATCC 11775
NCBI: GCA_003697165.2

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.75	no
125438	anaerobic	anaerobicⓘ	no	95.78	yes
125438	aerobic	aerobicⓘ	no	67.86	yes
125438	spore-forming	spore-formingⓘ	no	87.70	no
125438	thermophilic	thermophileⓘ	no	98.50	yes
125438	flagellated	motile2+ⓘ	yes	76.48	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Draft genome sequence of Tetramitus sp. JP001.	Naga Papa Rao AH, Vighnesh L, Bhagat H, Sasikala C, Venkata Ramana C.	Microbiol Resour Announc	10.1128/mra.00797-25	2025
	Genome sequences of 70 multidrug-resistant Gram-negative isolates in high-risk neonates in the Northeast of Mexico.	Rodriguez-Orduna L, Lara-Diaz VJ, Alcorta-Garcia MR, Lopez-Villasenor CN, Licona-Cassani C.	Microbiol Resour Announc	10.1128/mra.00274-24	2024
	Genomic characterization of bla _OXA-48 -carrying IncL plasmids in Enterobacterales in Vietnam.	Dieu Tran L, Thai Pham D, Duong Tran N, Anh Dang D, Anh Tran H, van Doorn HR, Shibayama K, Huy Tran H, Suzuki M.	MicroPubl Biol	10.17912/micropub.biology.001603	2025
Genetics	Whole-genome sequencing of multidrug-resistant Escherichia coli causing urinary tract infection in an immunocompromised patient: a case report.	Ahmed MY, Gorish BMT, Alhaj EM, Elrhim MAEA, Siddig SS, Altayb HN.	J Med Case Rep	10.1186/s13256-024-04663-4	2024
	Kinetics of inactivation of bacteria responsible for infections in hospitals using UV-LED.	Rito B, Matos L, Proenca DN, Morais PV.	Heliyon	10.1016/j.heliyon.2024.e30738	2024
	Evaluation of a microfluidic-based point-of-care prototype with customized chip for detection of bacterial clusters.	Treffon J, Isserstedt-John N, Klemm R, Gartner C, Mellmann A.	Microbiol Spectr	10.1128/spectrum.00862-24	2024
Enzymology	Comparison of the mechanism of antimicrobial action of the gold(I) compound auranofin in Gram-positive and Gram-negative bacteria.	Quadros Barse L, Ulfig A, Varatnitskaya M, Vazquez-Hernandez M, Yoo J, Imann AM, Lupilov N, Fischer M, Becker K, Bandow JE, Leichert LI.	Microbiol Spectr	10.1128/spectrum.00138-24	2024
	Application of an Ultrasonic Nebulizer Closet in the Disinfection of Textiles and Footwear.	Henriques TM, Rito B, Proenca DN, Morais PV.	Int J Environ Res Public Health	10.3390/ijerph191710472	2022
	Gram-negative sepsis caused by a rare pathogen Phytobacter ursingii.	Choice S, Sherman A, Holder K, Harrington E.	BMJ Case Rep	10.1136/bcr-2023-258384	2024
	Plasmid-mediated acquisition and chromosomal integration of bla_CTX-M-14 in a subclade of Escherichia coli ST131-H30 clade C1.	Komori K, Aoki K, Harada S, Ishii Y, Tateda K.	Antimicrob Agents Chemother	10.1128/aac.00817-24	2024
	Antimicrobial Activity and Chemical Characterization of a Non-Polar Extract of Saffron Stamens in Food Matrix.	Zara S, Petretto GL, Mannu A, Zara G, Budroni M, Mannazzu I, Multineddu C, Pintore G, Fancello F.	Foods	10.3390/foods10040703	2021
	Effect of the Inoculum-to-Substrate Ratio on Putative Pathogens and Microbial Kinetics during the Batch Anaerobic Digestion of Simulated Food Waste.	Otite SV, Gandhi BP, Agyabeng Fofie E, Lag-Brotons AJ, Ezemonye LI, Martin AD, Pickup RW, Semple KT.	Microorganisms	10.3390/microorganisms12030603	2024
	Trichuris muris egg-hatching assay for anthelminthic drug discovery and characterization.	Scharer A, Biendl S, Keiser J.	Int J Parasitol Drugs Drug Resist	10.1016/j.ijpddr.2023.10.001	2023
	Complete Genome and Plasmid Sequences of Escherichia coli Type Strain ATCC 11775.	Wadley TD, Jenjaroenpun P, Wongsurawat T, Ussery DW, Nookaew I.	Microbiol Resour Announc	10.1128/mra.00046-19	2019
	KpSC-ID: a multiplex real-time PCR assay for the simultaneous detection of the Klebsiella pneumoniae species complex and specific identification of Klebsiella pneumoniae, Klebsiella quasipneumoniae and Klebsiella variicola.	McAndrew G, Barbier E, Rodrigues C, Piveteau P, Brisse S, Reddington K.	Microbiology (Reading)	10.1099/mic.0.001587	2025
	Waste Citrus limon Leaves as Source of Essential Oil Rich in Limonene and Citral: Chemical Characterization, Antimicrobial and Antioxidant Properties, and Effects on Cancer Cell Viability.	Petretto GL, Vacca G, Addis R, Pintore G, Nieddu M, Piras F, Sogos V, Fancello F, Zara S, Rosa A.	Antioxidants (Basel)	10.3390/antiox12061238	2023
	Genome-centric view of the microbiome in a new deep-sea glass sponge species Bathydorus sp.	Wei TS, Gao ZM, Gong L, Li QM, Zhou YL, Chen HG, He LS, Wang Y.	Front Microbiol	10.3389/fmicb.2023.1078171	2023
Genetics	Single Nucleotide Polymorphism-Based Real-Time PCR Screening Assay for Rapid Tracking of Bacterial Infection Clusters To Complement Whole-Genome Sequencing Efforts during Outbreak Investigations.	Treffon J, Heppner B, Eismann J, Bothe J, Omengo B, Mellmann A.	Microbiol Spectr	10.1128/spectrum.03036-22	2022
	Effects of Betaine and Polydextrose on Intestinal Microbiota and Liver Ergothioneine in a High-Fat Diet-Fed Mouse Model and a Human Colonic Simulation Model.	Saarinen MT, Forssten SD, Evans K, Airaksinen K, Telving R, Hornshoj BH, Jensen HM, Jokkala J, Hanhineva K, Tiihonen K.	Nutrients	10.3390/nu17010109	2024
	Biological Activities of Ruthenium NHC Complexes: An Update.	Catalano A, Mariconda A, Sinicropi MS, Ceramella J, Iacopetta D, Saturnino C, Longo P.	Antibiotics (Basel)	10.3390/antibiotics12020365	2023
Proteome	Unified Workflow for the Rapid and In-Depth Characterization of Bacterial Proteomes.	Abele M, Doll E, Bayer FP, Meng C, Lomp N, Neuhaus K, Scherer S, Kuster B, Ludwig C.	Mol Cell Proteomics	10.1016/j.mcpro.2023.100612	2023
Genetics	Probiotic Potential and Safety Assessment of Type Strains of Weissella and Periweissella Species.	Fanelli F, Montemurro M, Verni M, Garbetta A, Bavaro AR, Chieffi D, Cho GS, Franz CMAP, Rizzello CG, Fusco V.	Microbiol Spectr	10.1128/spectrum.03047-22	2023
	A Microbial Co-Culturing System for Producing Cellulose-Hyaluronic Acid Composites.	Brugnoli M, Mazzini I, La China S, De Vero L, Gullo M.	Microorganisms	10.3390/microorganisms11061504	2023
	Guidelines for a Morphometric Analysis of Prokaryotic and Eukaryotic Cells by Scanning Electron Microscopy.	Czerwinska-Glowka D, Krukiewicz K.	Cells	10.3390/cells10123304	2021
	Active and Intelligent Biodegradable Packaging Based on Anthocyanins for Preserving and Monitoring Protein-Rich Foods.	Zhu B, Zhong Y, Wang D, Deng Y.	Foods	10.3390/foods12244491	2023
Enzymology	Evaluation of Ruthenium(II) N-Heterocyclic Carbene Complexes as Antibacterial Agents and Inhibitors of Bacterial Thioredoxin Reductase.	Burmeister H, Dietze P, Preu L, Bandow JE, Ott I.	Molecules	10.3390/molecules26144282	2021
Pathogenicity	Rational prioritization strategy allows the design of macrolide derivatives that overcome antibiotic resistance.	Konig G, Sokkar P, Pryk N, Heinrich S, Moller D, Cimicata G, Matzov D, Dietze P, Thiel W, Bashan A, Bandow JE, Zuegg J, Yonath A, Schulz F, Sanchez-Garcia E.	Proc Natl Acad Sci U S A	10.1073/pnas.2113632118	2021
	Escherichia ruysiae May Serve as a Reservoir of Antibiotic Resistance Genes across Multiple Settings and Regions.	Campos-Madueno EI, Aldeia C, Sendi P, Endimiani A.	Microbiol Spectr	10.1128/spectrum.01753-23	2023
Genetics	Resolving taxonomic confusion: establishing the genus Phytobacter on the list of clinically relevant Enterobacteriaceae.	Smits THM, Arend LNVS, Cardew S, Tang-Hallback E, Mira MT, Moore ERB, Sampaio JLM, Rezzonico F, Pillonetto M.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-022-04413-8	2022
	Endocrine disrupting potency and toxicity of novel sophorolipid quaternary ammonium salts.	Liwarska-Bizukojc E, Stevens CV, Delbeke EIP, Van Geem KM.	Ecotoxicology	10.1007/s10646-021-02378-6	2021
	Bacterial Surface Colonization of Sputter-Coated Platinum Films.	Czerwinska-Glowka D, Przystas W, Zablocka-Godlewska E, Student S, Cwalina B, Lapkowski M, Krukiewicz K.	Materials (Basel)	10.3390/ma13122674	2020
	Comparison of rRNA depletion methods for efficient bacterial mRNA sequencing.	Wahl A, Huptas C, Neuhaus K.	Sci Rep	10.1038/s41598-022-09710-y	2022
	Wide-genome selection of lactic acid bacteria harboring genes that promote the elimination of antinutritional factors.	Pham HH, Kim DH, Nguyen TL.	Front Plant Sci	10.3389/fpls.2023.1145041	2023
	Cross-Flow Microfiltration of Glycerol Fermentation Broths with Citrobacter freundii.	Tomczak W, Gryta M.	Membranes (Basel)	10.3390/membranes10040067	2020
	Modern approaches for detection of volatile organic compounds in metabolic studies focusing on pathogenic bacteria: Current state of the art.	Zuchowska K, Filipiak W.	J Pharm Anal	10.1016/j.jpha.2023.11.005	2024
Genetics	A pan-genome method to determine core regions of the Bacillus subtilis and Escherichia coli genomes.	Sutton G, Fogel GB, Abramson B, Brinkac L, Michael T, Liu ES, Thomas S.	F1000Res	10.12688/f1000research.51873.2	2021
	No endospore formation confirmed in members of the phylum Proteobacteria.	Beskrovnaya P, Fakih D, Morneau I, Hashimi A, Bello DG, Xing S, Nanci A, Huan T, Tocheva EI.	Appl Environ Microbiol	10.1128/aem.02312-20	2021
	Phenomics and Genomics Reveal Adaptation of Virgibacillus dokdonensis Strain 21D to Its Origin of Isolation, the Seawater-Brine Interface of the Mediterranean Sea Deep Hypersaline Anoxic Basin Discovery.	Zeaiter Z, Marasco R, Booth JM, Prosdocimi EM, Mapelli F, Callegari M, Fusi M, Michoud G, Molinari F, Daffonchio D, Borin S, Crotti E.	Front Microbiol	10.3389/fmicb.2019.01304	2019
	Phage Biocontrol of Pseudomonas aeruginosa in Water.	Kauppinen A, Siponen S, Pitkanen T, Holmfeldt K, Pursiainen A, Torvinen E, Miettinen IT.	Viruses	10.3390/v13050928	2021
	Administration of Bovine Milk Oligosaccharide to Weaning Gnotobiotic Mice Inoculated with a Simplified Infant Type Microbiota.	Jakobsen LMA, Sundekilde UK, Andersen HJ, Kot W, Mejia JLC, Nielsen DS, Hansen AK, Bertram HC.	Microorganisms	10.3390/microorganisms9051003	2021
Phenotype	Complete genome sequence of DSM 30083(T), the type strain (U5/41(T)) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy.	Meier-Kolthoff JP, Hahnke RL, Petersen J, Scheuner C, Michael V, Fiebig A, Rohde C, Rohde M, Fartmann B, Goodwin LA, Chertkov O, Reddy T, Pati A, Ivanova NN, Markowitz V, Kyrpides NC, Woyke T, Goker M, Klenk HP.	Stand Genomic Sci	10.1186/1944-3277-9-2	2014
Genetics	Chromosomal features of Escherichia coli serotype O2:K2, an avian pathogenic E. coli.	Jorgensen SL, Kudirkiene E, Li L, Christensen JP, Olsen JE, Nolan L, Olsen RH.	Stand Genomic Sci	10.1186/s40793-017-0245-3	2017
	Relation of pest insect-killing and soilborne pathogen-inhibition abilities to species diversification in environmental Pseudomonas protegens.	Garrido-Sanz D, Vesga P, Heiman CM, Altenried A, Keel C, Vacheron J.	ISME J	10.1038/s41396-023-01451-8	2023
	VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models.	Rangel-Pineros G, Almeida A, Beracochea M, Sakharova E, Marz M, Reyes Munoz A, Holzer M, Finn RD.	PLoS Comput Biol	10.1371/journal.pcbi.1011422	2023
	Isolation and sequence analysis of pCS36-4CPA, a small plasmid from Citrobacter sp. 36-4CPA.	Zharikova NV, Iasakov TR, Bumazhkin BK, Patutina EO, Zhurenko EI, Korobov VV, Sagitova AI, Kuznetsov BB, Markusheva TV.	Saudi J Biol Sci	10.1016/j.sjbs.2016.02.014	2018
	Anti-Quorum Sensing Activity of Probiotics: The Mechanism and Role in Food and Gut Health.	Salman MK, Abuqwider J, Mauriello G.	Microorganisms	10.3390/microorganisms11030793	2023
	Biotechnological Processes Simulating the Natural Fermentation Process of Bee Bread and Therapeutic Properties-An Overview.	Barta DG, Cornea-Cipcigan M, Margaoan R, Vodnar DC.	Front Nutr	10.3389/fnut.2022.871896	2022
	Kinetics of Biological Removal of the Selected Micropollutants and Their Effect on Activated Sludge Biomass.	Liwarska-Bizukojc E, Galamon M, Bernat P.	Water Air Soil Pollut	10.1007/s11270-018-4015-7	2018
Metabolism	Quorum-sensing regulation of constitutive plantaricin by Lactobacillus plantarum strains under a model system for vegetables and fruits.	Rizzello CG, Filannino P, Di Cagno R, Calasso M, Gobbetti M.	Appl Environ Microbiol	10.1128/aem.03224-13	2014
Phylogeny	Clear distinction between Burkholderia mallei and Burkholderia pseudomallei using fluorescent motB primers.	Schmoock G, Elschner M, Sprague LD.	Acta Vet Scand	10.1186/s13028-015-0104-4	2015
	Antimicrobial Activity of Lactococcus lactis subsp. lactis Isolated from a Stranded Cuvier's Beaked Whale (Ziphius cavirostris) against Gram-Positive and -Negative Bacteria.	Suzuki A, Suzuki M.	Microorganisms	10.3390/microorganisms9020243	2021
Metabolism	Isolation from a shea cake digester of a tannin-tolerant Escherichia coli strain decarboxylating p-hydroxybenzoic and vanillic acids.	Chamkha M, Record E, Garcia JL, Asther M, Labat M.	Curr Microbiol	10.1007/s00284-001-0020-x	2002
Metabolism	Allicin Induces Thiol Stress in Bacteria through S-Allylmercapto Modification of Protein Cysteines.	Muller A, Eller J, Albrecht F, Prochnow P, Kuhlmann K, Bandow JE, Slusarenko AJ, Leichert LI.	J Biol Chem	10.1074/jbc.m115.702308	2016
Phylogeny	Type material in the NCBI Taxonomy Database.	Federhen S.	Nucleic Acids Res	10.1093/nar/gku1127	2015
Metabolism	Lactic acid fermentation as a tool to enhance the functional features of Echinacea spp.	Rizzello CG, Coda R, Macias DS, Pinto D, Marzani B, Filannino P, Giuliani G, Paradiso VM, Di Cagno R, Gobbetti M.	Microb Cell Fact	10.1186/1475-2859-12-44	2013
	An organometallic structure-activity relationship study reveals the essential role of a Re(CO)₃ moiety in the activity against gram-positive pathogens including MRSA.	Patra M, Wenzel M, Prochnow P, Pierroz V, Gasser G, Bandow JE, Metzler-Nolte N.	Chem Sci	10.1039/c4sc02709d	2015
Phylogeny	Simultaneous detection and differentiation of Escherichia coli populations from environmental freshwaters by means of sequence variations in a fragment of the beta-D-glucuronidase gene.	Farnleitner AH, Kreuzinger N, Kavka GG, Grillenberger S, Rath J, Mach RL.	Appl Environ Microbiol	10.1128/aem.66.4.1340-1346.2000	2000
Enzymology	Colonization patterns of Enterococcus cecorum in two different broiler production cycles detected with a newly developed quantitative real-time PCR.	Jung A, Petersen H, Teske L, Rautenschlein S.	BMC Microbiol	10.1186/s12866-017-1021-7	2017
Metabolism	Hydrolytic fate of deoxynivalenol-3-glucoside during digestion.	Berthiller F, Krska R, Domig KJ, Kneifel W, Juge N, Schuhmacher R, Adam G.	Toxicol Lett	10.1016/j.toxlet.2011.08.006	2011
	Novel real-time PCR detection assay for Brucella suis.	Hansel C, Mertens K, Elschner MC, Melzer F.	Vet Rec Open	10.1136/vetreco-2014-000084	2015
Phylogeny	Propionibacterium acnes overabundance and natural killer group 2 member D system activation in corpus-dominant lymphocytic gastritis.	Montalban-Arques A, Wurm P, Trajanoski S, Schauer S, Kienesberger S, Halwachs B, Hogenauer C, Langner C, Gorkiewicz G.	J Pathol	10.1002/path.4782	2016
Enzymology	DNA microarray-based detection of Coxiella burnetii, the causative agent of Q fever.	Schmoock G, Ehricht R, Sprague LD.	Acta Vet Scand	10.1186/1751-0147-56-27	2014
	Modulating the activity of short arginine-tryptophan containing antibacterial peptides with N-terminal metallocenoyl groups.	Albada HB, Chiriac AI, Wenzel M, Penkova M, Bandow JE, Sahl HG, Metzler-Nolte N.	Beilstein J Org Chem	10.3762/bjoc.8.200	2012
	Tuning the activity of a short arg-trp antimicrobial Peptide by lipidation of a C- or N-terminal lysine side-chain.	Albada HB, Prochnow P, Bobersky S, Langklotz S, Schriek P, Bandow JE, Metzler-Nolte N.	ACS Med Chem Lett	10.1021/ml300148v	2012
	Strong sesquiterpene emissions from Amazonian soils.	Bourtsoukidis E, Behrendt T, Yanez-Serrano AM, Hellen H, Diamantopoulos E, Catao E, Ashworth K, Pozzer A, Quesada CA, Martins DL, Sa M, Araujo A, Brito J, Artaxo P, Kesselmeier J, Lelieveld J, Williams J.	Nat Commun	10.1038/s41467-018-04658-y	2018
	Design and Application of Antimicrobial Peptide Conjugates.	Reinhardt A, Neundorf I.	Int J Mol Sci	10.3390/ijms17050701	2016
Enzymology	Coupling genetic and chemical microbiome profiling reveals heterogeneity of archaeome and bacteriome in subsurface biofilms that are dominated by the same archaeal species.	Probst AJ, Birarda G, Holman HY, DeSantis TZ, Wanner G, Andersen GL, Perras AK, Meck S, Volkel J, Bechtel HA, Wirth R, Moissl-Eichinger C.	PLoS One	10.1371/journal.pone.0099801	2014
	Unlabeled helper oligonucleotides increase the in situ accessibility to 16S rRNA of fluorescently labeled oligonucleotide probes.	Fuchs BM, Glockner FO, Wulf J, Amann R.	Appl Environ Microbiol	10.1128/aem.66.8.3603-3607.2000	2000
	In situ accessibility of Escherichia coli 23S rRNA to fluorescently labeled oligonucleotide probes.	Fuchs BM, Syutsubo K, Ludwig W, Amann R.	Appl Environ Microbiol	10.1128/aem.67.2.961-968.2001	2001
	A single-cell view on the ecophysiology of anaerobic phototrophic bacteria.	Musat N, Halm H, Winterholler B, Hoppe P, Peduzzi S, Hillion F, Horreard F, Amann R, Jorgensen BB, Kuypers MM.	Proc Natl Acad Sci U S A	10.1073/pnas.0809329105	2008
Metabolism	Duodenal and faecal microbiota of celiac children: molecular, phenotype and metabolome characterization.	Di Cagno R, De Angelis M, De Pasquale I, Ndagijimana M, Vernocchi P, Ricciuti P, Gagliardi F, Laghi L, Crecchio C, Guerzoni ME, Gobbetti M, Francavilla R.	BMC Microbiol	10.1186/1471-2180-11-219	2011
Enzymology	Highly sensitive real-time PCR for specific detection and quantification of Coxiella burnetii.	Klee SR, Tyczka J, Ellerbrok H, Franz T, Linke S, Baljer G, Appel B.	BMC Microbiol	10.1186/1471-2180-6-2	2006
Phylogeny	Different fecal microbiotas and volatile organic compounds in treated and untreated children with celiac disease.	Di Cagno R, Rizzello CG, Gagliardi F, Ricciuti P, Ndagijimana M, Francavilla R, Guerzoni ME, Crecchio C, Gobbetti M, De Angelis M.	Appl Environ Microbiol	10.1128/aem.02793-08	2009
	Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes.	Fuchs BM, Wallner G, Beisker W, Schwippl I, Ludwig W, Amann R.	Appl Environ Microbiol	10.1128/aem.64.12.4973-4982.1998	1998
Metabolism	Isoprenoid biosynthesis in bacteria: a novel pathway for the early steps leading to isopentenyl diphosphate.	Rohmer M, Knani M, Simonin P, Sutter B, Sahm H.	Biochem J	10.1042/bj2950517	1993
Metabolism	H2-dependent anaerobic growth of Escherichia coli on L-malate: succinate formation.	Macy J, Kulla H, Gottschalk G.	J Bacteriol	10.1128/jb.125.2.423-428.1976	1976
Metabolism	Biodegradation of aromatic compounds by Escherichia coli.	Diaz E, Ferrandez A, Prieto MA, Garcia JL.	Microbiol Mol Biol Rev	10.1128/mmbr.65.4.523-569.2001	2001
	Complete sequence of the avian pathogenic Escherichia coli strain VTB96933v containing a novel conjugative antimicrobial resistance and virulence IncI1-ST114-ColBM plasmid.	Wang Z, Gerber D, Perreten V.	Microbiol Resour Announc	10.1128/mra.00284-25	2025
	Blood-Brain Barrier Penetration of Novel 4-Trifluoromethyl-Coumarin Hybrids with Antibacterial Properties as Potential Brain Therapeutics in the Context of Spatially Diverse Healthcare Systems.	Kowalczyk P, Koszelewski D, Misztal T, Szlis M, Mlotkowska P, Golebiewski M, Glowacz K, Kocot M, Marczyk M, Wypych A, Kurylczyk A, Krajewska-Pedzik A, Ostaszewski R.	Int J Mol Sci	10.3390/ijms26199655	2025
	Antibacterial, antioxidant, anti-inflammatory activities and skin irritation side effects of Spirostachys africana stem-bark extracts used traditionally for child skincare by isiXhosa communities in South Africa	Mulaudzi RB, Lebelo SL, Maqolo K, Erhabor RC, Tshabalala T, McGaw LJ, Ndhlala AR, Van Staden J.	S Afr J Bot		2025
Pathogenicity	An interbacterial cysteine protease toxin inhibits cell growth by targeting type II DNA topoisomerases GyrB and ParE.	Song PY, Tsai CE, Chen YC, Huang YW, Chen PP, Wang TH, Hu CY, Chen PY, Ku C, Hsia KC, Ting SY.	PLoS Biol	10.1371/journal.pbio.3003208	2025
	Synergistic effect of the hybrid compounds of cationic pillararene and an efflux pump inhibitor against Gram-negative bacteria.	Liu Y, Wu G, Zhu J, Jiang Y, Liu H.	RSC Med Chem	10.1039/d5md00262a	2025
	Characterization of Five Lytic Bacteriophages as New Members of the Genus Mosigvirus, Infecting Multidrug-Resistant Shiga Toxin-Producing Escherichia coli and Their Antibiofilm Activity.	Na JB, Lee S, Park EJ, Lim S, Lee K, Kim YB, Cha TS, Park SY, Kim JH.	Viruses	10.3390/v17111501	2025
	Microencapsulation of Azadirachta indica oil and Tinospora cordifolia extracts blend for single-use applications.	Khan O, Chandra Das S, Bedoura S.	Heliyon	10.1016/j.heliyon.2024.e39163	2024
	Rapid alignment-free bacteria identification via optical scattering with LEDs and YOLOv8.	Romphosri S, Pissuwan D, Wattanavichean N, Buabthong P, Waritanant T.	Sci Rep	10.1038/s41598-024-71238-0	2024
	Cross-Contamination With Escherichia Coli, Listeria Monocytogenes, and Murine Norovirus During Potato Washing and Their Inactivation Using Peroxyacetic Acid and Aqueous Chlorine Dioxide.	Kwon H, Yeo D, Yoon D, Hwang S, Lim DJ, Jin S, Lee DU, Choi C.	J Food Sci	10.1111/1750-3841.70632	2025
	Synthesis and Isolation of Phenol- and Thiol-Derived Epicatechin Adducts Prepared from Avocado Peel Procyanidins Using Centrifugal Partition Chromatography and the Evaluation of Their Antimicrobial and Antioxidant Activity.	Berrios-Henriquez B, Venegas-Toloza M, Reyes-Fuentes M, Zuniga-Arbalti F, Bustamante L, Garcia-Cancino A, Alarcon-Enos J, Pastene-Navarrete E.	Molecules	10.3390/molecules29122872	2024
	Antimicrobial cobaltocenium copolymers: tuning amphiphilicity against NDM-1 bacteria.	Hossain MW, Brand I, Barman S, Abidoun A, Hwang J, Parris A, Yang X, Nagarkatti P, Nagarkatti M, Tang C.	Biomater Sci	10.1039/d5bm00497g	2025
	Limonene and its derived oligomer as bioactive additives in starch/coffee husks biocomposites for food packaging applications.	Schutz GF, Alves RMV, Delarmelina C, Duarte MCT, Vieira RP.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.129482	2024
	Assessment of the Impact of Antimicrobial Photodynamic Therapy Using a 635 nm Diode Laser and Toluidine Blue on the Susceptibility of Selected Strains of Candida and Staphylococcus aureus: An In Vitro Study.	Tkaczyk M, Mertas A, Kuska-Kielbratowska A, Fiegler-Rudol J, Bobela E, Cisowska M, Skaba D, Wiench R.	Microorganisms	10.3390/microorganisms13092126	2025
	Evaluation of anti-inflammatory and wound healing properties of Tinospora cordifolia extract.	Das SC, Biswas S, Khan O, Akter R, Azad MAK, Sarkar SK, Masum MA, Bedoura S.	PLoS One	10.1371/journal.pone.0317928	2025
	Phylogenomic Identification of a Highly Conserved Copper-Binding RiPP Biosynthetic Gene Cluster in Marine Microbulbifer Bacteria.	Tang Y, Zhong W, Fu L, Asante E, Kostenko A, Vidya FNU, Mandelare-Ruiz P, Adeogun TT, Anderson GP, Edmonds BE, Fang O, Han M, Hollingsworth AS, Ingham AR, Kirby CR, Landrum A, Mack CR, Nobari NS, Oswald EJ, Polevoy CL, Sharifian Y, So TJ, Stokes JR, Thompson RS, Vuthamaraju R, Wang EC, Yang WH, Onstine AE, Paul VJ, Wu R, Aron AT, Agarwal V.	ACS Chem Biol	10.1021/acschembio.5c00507	2025
Enzymology	Development of a DC-Biased AC-Stimulated Microfluidic Device for the Electrokinetic Separation of Bacterial and Yeast Cells.	Nasir Ahamed NN, Mendiola-Escobedo CA, Perez-Gonzalez VH, Lapizco-Encinas BH.	Biosensors (Basel)	10.3390/bios14050237	2024
	Vitex Genus as a Source of Antimicrobial Agents.	Islam Z, Caldeira GI, Canica M, Islam N, Silva O.	Plants (Basel)	10.3390/plants13030401	2024
	Antimicrobial Metabolites Isolated from Some Marine Bacteria Associated with Callyspongia crassa Sponge of the Red Sea.	Alahmari AN, Hassoubah SA, Alaidaroos BA, Al-Hejin AM, Bataweel NM, Farsi RM, Algothmi KM, Alshammari NM, Ashour ATK.	Microorganisms	10.3390/microorganisms13071552	2025
	Paving the way for new antimicrobial peptides through molecular de-extinction.	Osiro KO, Gil-Ley A, Fernandes FC, de Oliveira KBS, de la Fuente-Nunez C, Franco OL.	Microb Cell	10.15698/mic2025.02.841	2025
	Risk of multidrug resistance in Escherichia coli associated with routine antimicrobial prophylaxis on pig farms.	Toya R, Okuno M, Sasaki Y, Yoshihara K, Deguchi Y, Nagano DS, Shimada S, Ogura Y.	NPJ Antimicrob Resist	10.1038/s44259-025-00130-2	2025
	Structure-function-guided design of synthetic peptides with anti-infective activity derived from wasp venom.	Boaro A, Ageitos L, Torres MT, Blasco EB, Oztekin S, de la Fuente-Nunez C.	Cell Rep Phys Sci	10.1016/j.xcrp.2023.101459	2023
	Antimicrobial activity of Paenarthrobacter nicotinovorans.	Kakol J, Vang M, Sausen D, Steeno T, Kolokithas A.	MicroPubl Biol	10.17912/micropub.biology.000921	2023
	Synthesis, Antimicrobial Activity, and Tyrosinase Inhibition by Multifunctional 3,4-Dihydroxy-Phenyl Peptidomimetics.	Wavhal DS, Koszelewski D, Kowalczyk P, Brodzka A, Ostaszewski R.	Int J Mol Sci	10.3390/ijms26041702	2025
	Inhibition of IL-27 signaling regulates chemokine levels and sustains CXCR2 receptor expression on mononuclear cells to improve disease outcomes during gram-negative neonatal sepsis.	Annamanedi M, Vance JK, Robinson CM.	Front Immunol	10.3389/fimmu.2025.1653355	2025
	Potent targeted larvicidal activities of marine-derived Bacillus sp. bacterial extracts on mosquito vectors.	Prashar C, Devkar H, Vandana V, Kona MP, Singh OP, Das R, Vashisht K, Thakur N, Pandey KC.	Sci Rep	10.1038/s41598-024-80777-5	2025
	Rapid detection and capture of clinical Escherichia coli strains mediated by OmpA-targeting nanobodies.	Sorgenfrei M, Hurlimann LM, Printz A, Wegner F, Morger D, Ackle F, Remy MM, Montowski G, Keserue HA, Cuenod A, Imkamp F, Egli A, Keller PM, Seeger MA.	Commun Biol	10.1038/s42003-025-08345-9	2025
	Driving forces shaping the microbial ecology in meat packing plants.	Yang X, Narvaez-Bravo C, Zhang P.	Front Microbiol	10.3389/fmicb.2023.1333696	2023
	Functionalised Mesoporous Silica Thin Films as ROS-Generating Antimicrobial Coatings	Laskowska M, Kowalczyk P, Karczmarska A, Pogoda K, Zubko M, Laskowski L.	Int J Mol Sci		2025
	Escherichia Coli: What Is and Which Are?	Cobo-Simon M, Hart R, Ochman H.	Mol Biol Evol	10.1093/molbev/msac273	2023
	Antimicrobial and Anticancer Activities of Lactiplantibacillus plantarum Probio87 Isolated from Human Breast Milk	Xu P, Uma Mageswary M, Nisaa A, Li X, Tan Y, Oon C, Tan C, Luo W, Liong M.	Nutrients		2025
	Computational Design of Pore-Forming Peptides with Potent Antimicrobial and Anticancer Activities.	Deb R, Torres MDT, Boudny M, Koberska M, Cappiello F, Popper M, Dvorakova Bendova K, Drabinova M, Hanackova A, Jeannot K, Petrik M, Mangoni ML, Balikova Novotna G, Mraz M, de la Fuente-Nunez C, Vacha R.	J Med Chem	10.1021/acs.jmedchem.4c00912	2024
	Bioactive Compound Characterization and Phytopharmacological Potentials of Tulbaghia violacea Fruits and Seeds.	Oyerinde RO, Risenga IM.	Chem Biodivers	10.1002/cbdv.202403198	2025
Genetics	Bacteriophage cocktail LEC2-LEC10 for broad-spectrum control of pathogenic and uncharacterized Escherichia coli in fresh produce	Kim E, Ryu S, Lim J.	Front Microbiol		2025
	A study on drug delivery and release kinetics of polyethylene glycol-functionalized few-layer graphene (FLG) incorporated into a gelatin-chitosan bio-composite film.	Sultana N, Hasan M, Alim MS, Tahia F, Komatsu N, Salem KS, Mustafizur Rahman AFM.	RSC Adv	10.1039/d5ra05507e	2025
	Isolation and identification of bacteria from blood within 12 h using standard laboratory equipment.	Marino Miguelez MH, Huguenin-Dumittan A, Osaid M, van der Wijngaart W.	Sci Rep	10.1038/s41598-025-09024-9	2025
	Bioprospecting of culturable marine biofilm bacteria for novel antimicrobial peptides.	Fan S, Qin P, Lu J, Wang S, Zhang J, Wang Y, Cheng A, Cao Y, Ding W, Zhang W.	Imeta	10.1002/imt2.244	2024
	Phytochemical analysis and evaluation of its antioxidant, antimicrobial, and cytotoxic activities for different extracts of Casuarina equisetifolia.	Abdallah WE, Shams KA, El-Shamy AM.	BMC Complement Med Ther	10.1186/s12906-024-04422-4	2024
Proteome	Deep learning reveals antibiotics in the archaeal proteome.	Torres MDT, Wan F, de la Fuente-Nunez C.	Nat Microbiol	10.1038/s41564-025-02061-0	2025
	Goat's Skim Milk Enriched with Agrocybe aegerita (V. Brig.) Vizzini Mushroom Extract: Optimization, Physico-Chemical Characterization, and Evaluation of Techno-Functional, Biological and Antimicrobial Properties.	Milincic DD, Sredovic Ignjatovic I, Stojkovic D, Petrovic J, Kostic AZ, Glamoclija J, Petkovic AD, Plecic A, Levic S, Rac V, Pavlovic VB, Stanojevic SP, Nedovic VA, Pesic MB.	Foods	10.3390/foods14061056	2025
	Characterization of Broad Spectrum Bacteriophage vB ESM-pEJ01 and Its Antimicrobial Efficacy Against Shiga Toxin-Producing Escherichia coli in Green Juice.	Park EJ, Lee S, Na JB, Kim YB, Lee KM, Park SY, Kim JH.	Microorganisms	10.3390/microorganisms13010103	2025
	Therapeutic effects of orally administration of viable and inactivated probiotic strains against murine urinary tract infection.	Van VTH, Liu ZS, Hsieh YJ, Shiu WC, Chen BY, Ku YW, Chen PW.	J Food Drug Anal	10.38212/2224-6614.3474	2023
	Prenatal versus Postnatal Initial Colonization of Healthy Neonates' Colon Ecosystem by the Enterobacterium Escherichia coli.	Al-Balawi M, Morsy FM.	Microbiol Spectr	10.1128/spectrum.00379-21	2021
	Antibacterial Activity, Probiotic Potential, and Biocontrol Efficacy of Two Lactic Acid Bacteria Against Penicillium expansum on Fresh Grapes.	Hou Y, Duan Y, Wu G, Zhang J, Luo X, Zhang M, Pang H, Hao Y, Wang Y, Cai Y, Wang L, Tan Z.	Foods	10.3390/foods14030493	2025
	Structural investigations and antibacterial, antifungal and anticancer studies on zinc salicylaldimine complexes.	Ibrahim AB, Williem ES, Elkhalik SA, Villinger A, Abbas SM.	Future Med Chem	10.1080/17568919.2024.2363672	2024
	Chemical Composition, Antioxidant and Antimicrobial Activity of Piper carpunya and Simira ecuadorensis: A Comparative Study of Four Extraction Methods	Guaman-Balcazar M, Hualpa D, Infante G, Luzuriaga L, Riofrio J, Jarro A, Lopez E, Salas-Gomez V, Salazar R, Reyes J, Meneses M.	Plants (Basel)		2025
	Green nanotechnology for the enhancement of antibacterial properties in lining leather: MgO-chitosan nanocomposite coating.	Ahmed S, Imon SS, Hasan MJ, Alam MS.	Heliyon	10.1016/j.heliyon.2024.e39170	2024
	Weissella sp. SNUL2 as potential probiotics with broad-spectrum antimicrobial activities.	Han JW, Lee N, Kim HJ, Moon SJ, Lee SC, Kim HJ.	Heliyon	10.1016/j.heliyon.2024.e28481	2024
	Phenolic Content Analysis of Two Species Belonging to the Lamiaceae Family: Antioxidant, Anticholinergic, and Antibacterial Activities.	Ndhlala AR, Isik M, Kavaz Yuksel A, Dikici E.	Molecules	10.3390/molecules29020480	2024
Pathogenicity	In Vitro and In Vivo Biological Activity of Berberine Chloride against Uropathogenic E. coli Strains Using Galleria mellonella as a Host Model.	Petronio Petronio G, Cutuli MA, Magnifico I, Venditti N, Pietrangelo L, Vergalito F, Pane A, Scapagnini G, Di Marco R.	Molecules	10.3390/molecules25215010	2020
	Developing and Screening of a Bacteria-Fighting and Moisture-Controlling Coccinia grandis and Poly(vinyl alcohol) Electrospun Nanofibrous Mat.	Karim FE, Islam MR, Alam MR, Jahan T, Raoha S, Haque S.	ACS Omega	10.1021/acsomega.4c03884	2024
	Analysis of in vitro expression of virulence genes related to antibiotic and disinfectant resistance in Escherichia coli as an emerging periodontal pathogen.	Monroy-Perez E, Hernandez-Jaimes T, Morales-Espinosa R, Delgado G, Martinez-Gregorio H, Garcia-Cortes LR, Herrera-Gabriel JP, De Lira-Silva A, Vaca-Paniagua F, Paniagua-Contreras GL.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1412007	2024
	Indole-containing arene-ruthenium complexes with broad spectrum activity against antibiotic-resistant bacteria.	Nolan VC, Rafols L, Harrison J, Soldevila-Barreda JJ, Crosatti M, Garton NJ, Wegrzyn M, Timms DL, Seaton CC, Sendron H, Azmanova M, Barry NPE, Pitto-Barry A, Cox JAG.	Curr Res Microb Sci	10.1016/j.crmicr.2021.100099	2022
	Antioxidant, antibacterial and antiviral effects of the combination of ginger and garlic extracts.	Rajendrasozhan S.	Bioinformation	10.6026/973206300200011	2024
	Enhancing the Antimicrobial and UV Resistance Properties of PC Blend and Recycled Cotton Fabric through Ag/TiO₂ Nanocomposite.	Rabbi MBU, Al Montasir MS, Emon EH, Rahim A, Ridoy FA, Khan MNH, Sani AA, Tania IS, Islam MR, Islam S, Khatun N, Bedoura S.	ACS Omega	10.1021/acsomega.4c07348	2025
	Aminoglycoside heteroresistance in Enterobacter cloacae is driven by the cell envelope stress response.	Choi AJ, Bennison DJ, Kulkarni E, Azar H, Sun H, Li H, Bradshaw J, Yeap HW, Lim N, Mishra V, Crespo-Puig A, Mills EA, Davies F, Sriskandan S, Shenoy AR.	mBio	10.1128/mbio.01699-24	2024
	Neutrophil extracellular traps have active DNAzymes that promote bactericidal activity.	Ku TH, Ram-Mohan N, Zudock EJ, Abe R, Yang S.	Nucleic Acids Res	10.1093/nar/gkae1262	2025
	Tanshinones target drug-resistant tuberculosis: efficacy, selectivity, and potential mechanism of action.	Polinario G, Rosa MABC, Campos DL, Moraes LLS, de Campos MMA, Silva IGM, Barros-Cordeiro KB, Bao SN, Pavan FR.	RSC Med Chem	10.1039/d5md00637f	2025
	Characterization of Autochthonous Strains from the Cecal Content of Creole Roosters for a Potential Use as Probiotics.	Melara EG, Avellaneda MC, Rondon AJ, Rodriguez M, Valdivie M, Martinez Y.	Animals (Basel)	10.3390/ani13030455	2023
	A Metagenomic Approach for Characterizing Antibiotic Resistance Genes in Specific Bacterial Populations: Demonstration with Escherichia coli in Cattle Manure.	Li B, Li X, Wang B, Yan T.	Appl Environ Microbiol	10.1128/aem.02554-21	2022
	Biosurfactant from Bacillus subtilis DS03: Properties and Application in Cleaning Out Place System in a Pilot Sausages Processing.	Cruz Mendoza I, Villavicencio-Vasquez M, Aguayo P, Coello Montoya D, Plaza L, Romero-Pena M, Marques AM, Coronel-Leon J.	Microorganisms	10.3390/microorganisms10081518	2022
	Mechanistic insights into endometriosis: roles of Streptococcus agalactiae and L-carnitine in lesion development and angiogenesis.	Zhuang Y, Lyu T, Chen Y, Li W, Tang L, Xian SP, Yang PF, Wang L, Zhang QQ, Mei C, Lin YJ, Yan Z, Li Z, He JZ, Zeng FM.	Angiogenesis	10.1007/s10456-025-09991-7	2025
	Novel composite films based on sodium alginate and gallnut extract with enhanced antioxidant, antimicrobial, barrier and mechanical properties	Aloui H, Deshmukh AR, Khomlaem C, Kim BS.	Food hydrocolloids.	10.1016/j.foodhyd.2020.106508	2021
	Therapeutic Potential of Punica granatum and Isolated Compounds: Evidence-Based Advances to Treat Bacterial Infections.	Mendes PM, Gomes Fontoura GM, Rodrigues LDS, Souza AS, Viana JPM, Fernandes Pereira AL, Dutra RP, Nogueira Ferreira AG, Neto MS, Reis AS, Berretta AA, Monteiro-Neto V, Maciel MCG.	Int J Microbiol	10.1155/2023/4026440	2023
	Characteristics of Bacteriophage Isolates and Expression of Shiga Toxin Genes Transferred to Non Shiga Toxin-Producing E. coli by Transduction.	Park DS, Park JH.	J Microbiol Biotechnol	10.4014/jmb.2102.02040	2021
	Multi-Drug Resistant Pathogenic Escherichia coli Isolated from Wild Birds, Chicken, and the Environment in Malaysia.	Mohamed MI, Abu J, Zakaria Z, Khan AR, Abdul Aziz S, Bitrus AA, Habib I.	Antibiotics (Basel)	10.3390/antibiotics11101275	2022
	Water Parameters Predicting the Seasonal and Spatial Dynamics of the Vibrio Harveyi- and Splendidus-Clade Pathogens.	Royer K, Barkovskii AL.	Microorganisms	10.3390/microorganisms13092167	2025
Pathogenicity	Quorum sensing modulatory and biofilm inhibitory activity of Plectranthus barbatus essential oil: a novel intervention strategy.	Chatterjee B, Vittal RR.	Arch Microbiol	10.1007/s00203-020-02171-9	2021
	Synthesis and Isolation of Phenol- and Thiol-Derived Epicatechin Adducts Prepared from Avocado Peel Procyanidins Using Centrifugal Partition Chromatography and the Evaluation of Their Antimicrobial and Antioxidant Activity	Berrios-Henriquez B, Venegas-Toloza M, Reyes-Fuentes M, Zuniga-Arbalti F, Bustamante L, Garcia-Cancino A, Alarcon-Enos J, Pastene-Navarrete E.	Molecules		2024
	The Kinocidin Interleukin-26 Shows Immediate Antimicrobial Effects Even to Multi-resistant Isolates.	Hansen BT, Maschkowitz G, Podschun R, Fickenscher H.	Front Microbiol	10.3389/fmicb.2021.757215	2021
	A review on fungal endophytes of the family Fabaceae, their metabolic diversity and biological applications.	Saini HP, Meena M, Sahoo A, Mehta T.	Heliyon	10.1016/j.heliyon.2025.e42153	2025
Genetics	Discovery of antimicrobial peptides in the global microbiome with machine learning.	Santos-Junior CD, Torres MDT, Duan Y, Rodriguez Del Rio A, Schmidt TSB, Chong H, Fullam A, Kuhn M, Zhu C, Houseman A, Somborski J, Vines A, Zhao XM, Bork P, Huerta-Cepas J, de la Fuente-Nunez C, Coelho LP.	Cell	10.1016/j.cell.2024.05.013	2024
	Synergistic Activity and Mechanism of Sanguinarine with Polymyxin B against Gram-Negative Bacterial Infections.	Qiao L, Zhang Y, Chen Y, Chi X, Ding J, Zhang H, Han Y, Zhang B, Jiang J, Lin Y.	Pharmaceutics	10.3390/pharmaceutics16010070	2024
	Persistence of sewage-associated genetic markers in advanced and conventional treated recycled water: implications for microbial source tracking in surface waters.	Lobos AE, Brandt AM, Gallard-Gongora JF, Korde R, Brodrick E, Harwood VJ.	mBio	10.1128/mbio.00655-24	2024
	Molecular hybridization strategy for tuning bioactive peptide function.	Pedron CN, Torres MT, Oliveira CS, Silva AF, Andrade GP, Wang Y, Pinhal MAS, Cerchiaro G, da Silva Junior PI, da Silva FD, Radhakrishnan R, de la Fuente-Nunez C, Oliveira Junior VX.	Commun Biol	10.1038/s42003-023-05254-7	2023
	Novel xanthan gum hydrogels boosted with crosslinked carboxymethyl chitosan and zinc oxide nanoparticles: synthesis, characterization and biological activity evaluation.	Almuthaybiri DMS, Alminderej FM, Mohamed NA.	BMC Chem	10.1186/s13065-025-01628-6	2025
	Enhancement of antibacterial and UV protection properties of blended wool/acrylic and silk fabrics by dyeing with the extract of Mimusops elengi leaves and metal salts.	Hossain S, Jalil MA, Islam T, Mahmud RU, Kader A, Islam MK.	Heliyon	10.1016/j.heliyon.2024.e25273	2024
	Antimicrobial effect of methylene blue in microbiologic culture to diagnose periprosthetic joint infection: an in vitro study.	Liu K, Luo Y, Hao L, Chen J.	J Orthop Surg Res	10.1186/s13018-022-03475-w	2022
	Asperinsuterpenes A-C from the Fungus Aspergillus insuetus BTBU20220155.	Zhang X, Song F, Han J, Wang L, Ma L, Xu X.	J Fungi (Basel)	10.3390/jof10090611	2024
	Marine Bromotyrosine Derivatives in Spotlight: Bringing Discoveries and Biological Significance.	Ferreira Montenegro P, Pham GN, Abdoul-Latif FM, Taffin-de-Givenchy E, Mehiri M.	Mar Drugs	10.3390/md22030132	2024
	Chimeric natural products derived from medermycin and the nature-inspired construction of their polycyclic skeletons.	Yin S, Liu Z, Shen J, Xia Y, Wang W, Gui P, Jia Q, Kachanuban K, Zhu W, Fu P.	Nat Commun	10.1038/s41467-022-32901-0	2022
	Non-Thermal Treatment Mediated by Curcumin for Enhancing Food Product Quality.	Wang Z, Yang H, Li Z, Liu J.	Foods	10.3390/foods13233980	2024
	Evaluation of Modulatory Activities of Lactobacillus crispatus Strains in the Context of the Vaginal Microbiota.	Argentini C, Fontana F, Alessandri G, Lugli GA, Mancabelli L, Ossiprandi MC, van Sinderen D, Ventura M, Milani C, Turroni F.	Microbiol Spectr	10.1128/spectrum.02733-21	2022
	Cutting edge for technical textiles (fluorescent, antibacterial and UV-protective) by incroporation of thienoisoquinoline-quinazoline derivatives.	Sharmoukh W, Marae IS, Bakhite EA, Ahmed HB, Emam HE.	BMC Chem	10.1186/s13065-025-01504-3	2025
	Atmospheric Cold Plasma Inactivation of Salmonella and Escherichia coli on the Surface of Golden Delicious Apples.	Kilonzo-Nthenge A, Liu S, Yannam S, Patras A.	Front Nutr	10.3389/fnut.2018.00120	2018
	Impact of different magnetic materials added to silver-magnetite nanoparticles on the structural, magnetic and antimicrobial properties.	El-Bassuony AAH, Gamal WM, Abdelsalam HK.	Eur Phys J Spec Top	10.1140/epjs/s11734-022-00759-4	2023
	By-product hazelnut seed skin characteristics and properties in terms of use in food processing and human nutrition.	Kruk M, Ponder A, Horoszewicz J, Poplawski D, Krol K, Leszczynska J, Jaworska D, Trzaskowska M.	Sci Rep	10.1038/s41598-024-69900-8	2024
	Distributed compact plasma reactor decontamination for planetary protection in space missions.	Choudhury B, Revazishvili T, Lozada M, Roy S, Mastro EN, Portugal S, Roy S.	Sci Rep	10.1038/s41598-023-29049-2	2023
Biotechnology	Validation of the Peel Plate Staphylococcus Aureus (SA) Test for Enumeration of S. aureus in Selected Foods and Non-Cultured Dairy Products: AOAC Performance Tested MethodSM 082401.	Salter RS, Durbin GW, Li S, Gilbert M, Crowley ES, Deterding A, Bastin B.	J AOAC Int	10.1093/jaoacint/qsae083	2025
	trans-Cinnamaldehyde as a Novel Candidate to Overcome Bacterial Resistance: An Overview of In Vitro Studies.	Usai F, Di Sotto A.	Antibiotics (Basel)	10.3390/antibiotics12020254	2023
	Aluminium(III) Oxide-The Silent Killer of Bacteria.	Schabikowski M, Kowalczyk P, Karczmarska A, Gawdzik B, Wypych A, Kramkowski K, Wrzosek K, Laskowski L.	Molecules	10.3390/molecules28010401	2023
Metabolism	Biochemical characterization of a novel alpha-L-fucosidase from Pedobacter sp. and its application in synthesis of 3'-fucosyllactose and 2'-fucosyllactose.	Shi R, Ma J, Yan Q, Yang S, Fan Z, Jiang Z.	Appl Microbiol Biotechnol	10.1007/s00253-020-10630-y	2020
	Diversity and Bioactive Potential of Actinobacteria from Unexplored Regions of Western Ghats, India.	Siddharth S, Vittal RR, Wink J, Steinert M.	Microorganisms	10.3390/microorganisms8020225	2020
	Impact of Microencapsulation on Ocimum gratissimum L. Essential Oil: Antimicrobial, Antioxidant Activities, and Chemical Composition.	Granados ADPF, Duarte MCT, Noguera NH, Lima DC, Rodrigues RAF.	Foods	10.3390/foods13193122	2024
Enzymology	Assessing the Discriminatory Capabilities of iEK Devices under DC and DC-Biased AC Stimulation Potentials.	Nasir Ahamed NN, Mendiola-Escobedo CA, Perez-Gonzalez VH, Lapizco-Encinas BH.	Micromachines (Basel)	10.3390/mi14122239	2023
	Do Ganoderma Species Represent Novel Sources of Phenolic Based Antimicrobial Agents?	Raseta M, Miskovic J, Capelja E, Zapora E, Petrovic Fabijan A, Knezevic P, Karaman M.	Molecules	10.3390/molecules28073264	2023
	Antibacterial Cu or Zn-MOFs Based on the 1,3,5-Tris-(styryl)benzene Tricarboxylate.	Lelouche SNK, Albentosa-Gonzalez L, Clemente-Casares P, Biglione C, Rodriguez-Dieguez A, Tolosa Barrilero J, Garcia-Martinez JC, Horcajada P.	Nanomaterials (Basel)	10.3390/nano13162294	2023
	Jugiones A-D: Antibacterial Xanthone-Anthraquinone Heterodimers from Australian Soil-Derived Penicillium shearii CMB-STF067.	Sritharan T, Salim AA, Khalil ZG, Capon RJ.	Antibiotics (Basel)	10.3390/antibiotics13010097	2024
	Essential Oils as Green Antibacterial Modifiers of Polymeric Materials.	Majewska-Smolarek K, Kowalewska A.	Polymers (Basel)	10.3390/polym17212924	2025
Phylogeny	Broad-range amplification and sequencing of the rpoB gene: a novel assay for bacterial identification in clinical microbiology.	Bivand JM, Dyrhovden R, Sivertsen A, Tellevik MG, Patel R, Kommedal O.	J Clin Microbiol	10.1128/jcm.00266-24	2024
	Evaluation of the frequency of Escherichia coli pathogroups in Brassica oleracea cultivars.	Razeh F, Salmanzadeh-Ahrabi S, Zarei R, Attaran B.	Iran J Microbiol	10.18502/ijm.v14i1.8808	2022
Enzymology	Increased E. coli bio-adsorption resistance of microfiltration membranes, using a bio-inspired approach.	Li J, Liu Y, Campos LC, Coppens MO.	Sci Total Environ	10.1016/j.scitotenv.2020.141777	2021
	Biocompatibility Assessment of Polylactic Acid (PLA) and Nanobioglass (n-BG) Nanocomposites for Biomedical Applications.	Castro JI, Valencia Llano CH, Tenorio DL, Saavedra M, Zapata P, Navia-Porras DP, Delgado-Ospina J, Chaur MN, Hernandez JHM, Grande-Tovar CD.	Molecules	10.3390/molecules27113640	2022
	Identification of Coumarins and Antimicrobial Potential of Ethanolic Extracts of Dipteryx odorata and Dipteryx punctata.	Sousa BCM, Castro SP, Lourido KA, Kasper AAM, Paulino GDS, Delarmelina C, Duarte MCT, Sartoratto A, Vieira TA, Lustosa DC, Barata LES.	Molecules	10.3390/molecules27185837	2022
	Synthetic Phosphoethanolamine Cellobiose Promotes Escherichia coli Biofilm Formation and Congo Red Binding.	Nguyen JM, Moore RE, Spicer SK, Gaddy JA, Townsend SD.	Chembiochem	10.1002/cbic.202000869	2021
	The Genus Diospyros: A Review of Novel Insights into the Biological Activity and Species of Mozambican Flora.	Ribeiro A, Serrano R, da Silva IBM, Gomes ET, Pinto JF, Silva O.	Plants (Basel)	10.3390/plants12152833	2023
Pathogenicity	The effects of low levels of trivalent ions on a standard strain of Escherichia coli (ATCC 11775) in aqueous solutions.	Deng C, Li X, Xue X, Pashley RM.	Microbiologyopen	10.1002/mbo3.574	2018
	Comparative Chemical Analysis and Bioactive Properties of Aqueous and Glucan-Rich Extracts of Three Widely Appreciated Mushrooms: Agaricus bisporus (J.E.Lange) Imbach, Laetiporus sulphureus (Bull.) Murill and Agrocybe aegerita (V. Brig.) Vizzini.	Petrovic J, Glamoclija J, Milincic DD, Doroski A, Levic S, Stanojevic SP, Kostic AZ, Minic DAP, Vidovic BB, Plecic A, Nedovic VA, Pesic MB, Stojkovic D.	Pharmaceuticals (Basel)	10.3390/ph17091153	2024
	Phytochemical Analysis and Biological Evaluation of Carob Leaf (Ceratonia siliqua L.) Crude Extracts Using NMR and Mass Spectroscopic Techniques.	Venianakis T, Parisis N, Christou A, Goulas V, Nikoloudakis N, Botsaris G, Gorican T, Grdadolnik SG, Tzakos AG, Gerothanassis IP.	Molecules	10.3390/molecules29225273	2024
	Goondicones A-H: Spiro-Isoindolinone Heartworm Anthelmintics from an Australian Pasture-Soil-Derived Streptomyces sp.	Han J, Bruhn DF, Childs CT, Moreno Y, Salim AA, Wu T, Capon RJ.	Antibiotics (Basel)	10.3390/antibiotics13121222	2024
	Consistent signatures in the human gut microbiome of old- and young-onset colorectal cancer.	Qin Y, Tong X, Mei WJ, Cheng Y, Zou Y, Han K, Yu J, Jie Z, Zhang T, Zhu S, Jin X, Wang J, Yang H, Xu X, Zhong H, Xiao L, Ding PR.	Nat Commun	10.1038/s41467-024-47523-x	2024
	Punicalagin, a pomegranate polyphenol sensitizes the activity of antibiotics against three MDR pathogens of the Enterobacteriaceae.	Kiran S, Tariq A, Iqbal S, Naseem Z, Siddique W, Jabeen S, Bashir R, Hussain A, Rahman M, Habib FE, Rauf W, Ali A, Sarwar Y, Jander G, Iqbal M.	BMC Complement Med Ther	10.1186/s12906-024-04376-7	2024
	The Oligosaccharide Region of LPS Governs Predation of E. coli by the Bacterivorous Protist, Acanthamoeba castellanii.	Liu Y, Koudelka GB.	Microbiol Spectr	10.1128/spectrum.02930-22	2023
	Navigating contradictions in enteric chemotactic stimuli	Franco K, Gentry-Lear Z, Shavlik M, Harms M, Baylink A.	Elife
	Green synthesis of silver nanoparticle using Oscillatoria sp. extract, its antibacterial, antibiofilm potential and cytotoxicity activity.	Adebayo-Tayo B, Salaam A, Ajibade A.	Heliyon	10.1016/j.heliyon.2019.e02502	2019
Biotechnology	Distribution of bacteria between different milk fractions, investigated using culture-dependent methods and molecular-based and fluorescent microscopy approaches.	Sun L, Dicksved J, Priyashantha H, Lundh A, Johansson M.	J Appl Microbiol	10.1111/jam.14377	2019
	Direct Identification of Label-Free Gram-Negative Bacteria with Bioreceptor-Free Concentric Interdigitated Electrodes.	Zamzami M, Alamoudi S, Ahmad A, Choudhry H, Khan MI, Hosawi S, Rabbani G, Shalaan ES, Arkook B.	Biosensors (Basel)	10.3390/bios13020179	2023
	Bioactive Bibenzyl Enantiomers From the Tubers of Bletilla striata.	Zhou M, Jiang S, Chen C, Li J, Lou H, Wang M, Liu G, Liu H, Liu T, Pan W.	Front Chem	10.3389/fchem.2022.911201	2022
Genetics	The Comparative Genome Dashboard.	Paley S, Caspi R, O'Maille P, Karp PD.	Front Microbiol	10.3389/fmicb.2024.1447632	2024
	Molecular de-extinction of ancient antimicrobial peptides enabled by machine learning.	Maasch JRMA, Torres MDT, Melo MCR, de la Fuente-Nunez C.	Cell Host Microbe	10.1016/j.chom.2023.07.001	2023
	Seasonal Chemical Variability and Antimicrobial, Anti-Proliferative Potential of Essential Oils from Baccharis uncinella, B. retusa, and B. calvescens (Asteraceae).	Dlugoviet TF, Ferriani AP, Hendges APPK, Camargo RG, Duarte MCT, Duarte RMT, Ruiz ALTG, Nagata N, Marques FA, Sales Maia BHLN.	Plants (Basel)	10.3390/plants14091311	2025
	Deep-learning-enabled antibiotic discovery through molecular de-extinction.	Wan F, Torres MDT, Peng J, de la Fuente-Nunez C.	Nat Biomed Eng	10.1038/s41551-024-01201-x	2024
	Legionella Detection in Water Networks as per ISO 11731:2017: Can Different Filter Pore Sizes and Direct Placement on Culture Media Influence Laboratory Results?	De Giglio O, Diella G, Trerotoli P, Consonni M, Palermo R, Tesauro M, Lagana P, Serio G, Montagna MT.	Int J Environ Res Public Health	10.3390/ijerph17062077	2020
Genetics	Molecular Characterization of bla_NDM-Carrying IncX3 Plasmids: bla_NDM-16b Likely Emerged from a Mutation of bla_NDM-5 on IncX3 Plasmid.	Ariyoshi T, Aoki K, Kubota H, Sadamasu K, Ishii Y, Tateda K.	Microbiol Spectr	10.1128/spectrum.01449-22	2022
	Staphylococcus Aureus Membrane Vesicles Kill Tumor Cells Through a Caspase-1-Dependent Pyroptosis Pathway.	Li M, Wang Y, Liu H, Huang X, Peng H, Yang Y, Hu Z, Dou J, Xiao C, Chen J, Shang W, Rao X.	Int J Nanomedicine	10.2147/ijn.s455158	2024
	Terpenoids from Marine Sources: A Promising Avenue for New Antimicrobial Drugs.	Liu X, Xin J, Sun Y, Zhao F, Niu C, Liu S.	Mar Drugs	10.3390/md22080347	2024
	Ecotoxicity Assessment of Graphene Oxides Using Test Organisms from Three Hierarchical Trophic Levels to Evaluate Their Potential Environmental Risk.	Nemeth I, Laszlo K, Bulatko A, Vaszita E, Molnar M.	Nanomaterials (Basel)	10.3390/nano13212858	2023
	Goondapyrones A-J: Polyketide alpha and gamma Pyrone Anthelmintics from an Australian Soil-Derived Streptomyces sp.	Jin S, Bruhn DF, Childs CT, Burkman E, Moreno Y, Salim AA, Khalil ZG, Capon RJ.	Antibiotics (Basel)	10.3390/antibiotics13100989	2024
	Kinetic models for pulsed electric field and thermal inactivation of Escherichia coli and Pseudomonas fluorescens in whole milk	Walter L, Knight G, Ng SY, Buckow R.	Int Dairy J	10.1016/j.idairyj.2016.01.027	2016
	Evaluation of Antimicrobial and Wound Healing Effects of Gold Nanoparticles Containing Abelmoschus esculentus (L.) Aqueous Extract.	Korani S, Rashidi K, Hamelian M, Jalalvand AR, Tajehmiri A, Korani M, Sathyapalan T, Sahebkar A.	Bioinorg Chem Appl	10.1155/2021/7019130	2021
	A Novel Liposomal In-Situ Hydrogel Formulation of Hypericum perforatum L.: In Vitro Characterization and In Vivo Wound Healing Studies.	Kurt AA, Aslan I.	Gels	10.3390/gels11030165	2025
	Evaluation of Antibacterial Synergism of Methanolic Extract of Dracocephalum kotschyi and Trachyspermum ammi.	Zarei Yazdeli M, Ghazaei C, Tasallot Maraghi E, Bakhshi A, Shukohifar M.	Malays J Med Sci	10.21315/mjms2021.28.6.7	2021
	A Lactoferricin B/Buforin Chimeric Peptide Causes a Rapid, Selective, Prolonged Cytotoxic Effect and Induces Apoptosis in HPV18-Positive Cervical Cancer Cells.	Ardila-Chantre N, Barragan-Cardenas AC, Reyes-Calderon JE, Franco-Zambrano DS, Matta-Orjuela EA, Rivera-Monroy JE, Munoz-Saez E, Carabana-Garcia C, Parra-Giraldo CM, Fierro-Medina R, Rivera-Monroy ZJ, Garcia-Castaneda JE.	ACS Omega	10.1021/acsomega.5c05953	2025
	Actinoflavosides B-D, Flavonoid Type Glycosides from Tidal Mudflat-Derived Actinomyces.	Jeong H, Jo SJ, Bae M, Kim YR, Moon K.	Mar Drugs	10.3390/md20090565	2022
	Anti-Staphylococcus aureus Activity of Volatile Phytochemicals and Their Combinations with Conventional Antibiotics Against Methicillin-Susceptible S. aureus (MSSA) and Methicillin-Resistant S. aureus (MRSA) Strains.	Nikolic I, Aleksic Sabo V, Gavric D, Knezevic P.	Antibiotics (Basel)	10.3390/antibiotics13111030	2024
	Camel urine as a potential source of bioactive molecules showing their efficacy against pathogens: A systematic review.	Amina R, Habiba R, Abouddihaj B.	Saudi J Biol Sci	10.1016/j.sjbs.2024.103966	2024
	The Synthesis and Evaluation of Diethyl Benzylphosphonates as Potential Antimicrobial Agents.	Brodzka A, Kowalczyk P, Trzepizur D, Koszelewski D, Kramkowski K, Szymczak M, Wypych A, Lizut R, Ostaszewski R.	Molecules	10.3390/molecules27206865	2022
	High Virulence and Multidrug Resistance of Escherichia coli Isolated in Periodontal Disease.	Hernandez-Jaimes T, Monroy-Perez E, Garzon J, Morales-Espinosa R, Navarro-Ocana A, Garcia-Cortes LR, Nolasco-Alonso N, Gaytan-Nunez FK, Moreno-Noguez M, Vaca-Paniagua F, Rojas-Jimenez EA, Paniagua-Contreras GL.	Microorganisms	10.3390/microorganisms11010045	2022
	Advances in silver nanoparticles: a comprehensive review on their potential as antimicrobial agents and their mechanisms of action elucidated by proteomics.	Rodrigues AS, Batista JGS, Rodrigues MAV, Thipe VC, Minarini LAR, Lopes PS, Lugao AB.	Front Microbiol	10.3389/fmicb.2024.1440065	2024
	The Genus Cladosporium: A Prospective Producer of Natural Products.	Li Y, Wang Y, Wang H, Shi T, Wang B.	Int J Mol Sci	10.3390/ijms25031652	2024
	A study of the surface charging properties of a standard strain of Escherichia coli (ATCC 11775) in aqueous solutions.	Li X, Xue X, Pashley RM.	Colloids Surf B Biointerfaces	10.1016/j.colsurfb.2015.08.048	2015
	Probiotic Therapy During Vaccination Alters Antibody Response to Simian-Human Immunodeficiency Virus Infection But Not to Commensals.	Wilson A, Manuzak JA, Liang H, Leda AR, Klatt N, Lynch RM.	AIDS Res Hum Retroviruses	10.1089/aid.2022.0123	2023
	Assessment of Zataria Multiflora Essential Oil-Incorporated Electrospun Polyvinyl Alcohol Fiber Mat as Active Packaging.	Moradinezhad F, Hedayati S, Ansarifar E.	Polymers (Basel)	10.3390/polym15041048	2023
	Preparation of polyclonal antibody against a universal bacterial antigen OmpA deduced by bioinformatic analysis and preliminary evaluation of concentration effects on foodborne pathogens.	Wang L, Ke Y, Li Y, Li Y, Yan Y, Song Y, Yang R, Gao B, Han Y.	Heliyon	10.1016/j.heliyon.2023.e16353	2023
	Enhanced antibacterial and anticancer activities of plant extract mediated green synthesized zinc oxide-silver nanoparticles.	Mohamad Sukri SNA, Shameli K, Teow SY, Chew J, Ooi LT, Lee-Kiun Soon M, Ismail NA, Moeini H.	Front Microbiol	10.3389/fmicb.2023.1194292	2023
	Landolphia (P. Beauv.) genus: Ethnobotanical, phytochemical and pharmacological studies.	Oladeji OS, Oluyori AP, Dada AO.	Saudi J Biol Sci	10.1016/j.sjbs.2024.103988	2024
	Escherichia coli Survival on Strawberries and Unpacked Romaine Lettuce Washed Using Contaminated Water.	Bhullar M, Perry B, Monge A, Nabwiire L, Shaw A.	Foods	10.3390/foods10061390	2021
	Implications of Pulsed Electric Field Pre-Treatment on Goat Milk Pasteurization.	Araujo A, Barbosa C, Alves MR, Romao A, Fernandes P.	Foods	10.3390/foods12213913	2023
	Enzymatic Synthesis of a Novel Coumarin Aminophosphonates: Antibacterial Effects and Oxidative Stress Modulation on Selected E. coli Strains.	Koszelewski D, Kowalczyk P, Brodzka A, Hrunyk A, Kramkowski K, Ostaszewski R.	Int J Mol Sci	10.3390/ijms24087609	2023
Phylogeny	Interaction between phytoplankton and heterotrophic bacteria in Arctic fjords during the glacial melting season as revealed by eDNA metabarcoding.	Han D, Park KT, Kim H, Kim TH, Jeong MK, Nam SI.	FEMS Microbiol Ecol	10.1093/femsec/fiae059	2024
Pathogenicity	Synthetic Peptides Derived from Bovine Lactoferricin Exhibit Antimicrobial Activity against E. coli ATCC 11775, S. maltophilia ATCC 13636 and S. enteritidis ATCC 13076.	Huertas Mendez NJ, Vargas Casanova Y, Gomez Chimbi AK, Hernandez E, Leal Castro AL, Melo Diaz JM, Rivera Monroy ZJ, Garcia Castaneda JE.	Molecules	10.3390/molecules22030452	2017
	Synthesis, characterization and antimicrobial activity applications of grafted copolymer alginate-g-poly(N-vinyl imidazole).	Abdellatif Soliman SM, Sanad MF, Shalan AE.	RSC Adv	10.1039/d1ra01874d	2021
	The Application of Ultrasonic Waves and Microwaves to Improve Antihyperglycaemic and Antimicrobial Activities of Marrubium vulgare Extracts.	Gavaric A, Vladic J, Vujetic J, Radnovic D, Volaric A, Zivkovic J, Savikin K, Vidovic S.	Antibiotics (Basel)	10.3390/antibiotics11111475	2022
	The vacuolar anti-Pseudomonal activity of neutrophil primary granule peptidyl-arginine deiminase enzymes.	Baird R, Yusuf A, Forde L, Pohl K, Kavanagh K, Fitzpatrick F, Gogoi D, Reeves EP.	Front Immunol	10.3389/fimmu.2024.1452393	2024
	Two New 4-Hydroxy-2-pyridone Alkaloids with Antimicrobial and Cytotoxic Activities from Arthrinium sp. GZWMJZ-606 Endophytic with Houttuynia cordata Thunb.	Yin Y, Wang D, Wu D, He W, Zuo M, Zhu W, Xu Y, Wang L.	Molecules	10.3390/molecules28052192	2023
	Interactions between Blastocystis subtype ST4 and gut microbiota in vitro.	Deng L, Tan KSW.	Parasit Vectors	10.1186/s13071-022-05194-x	2022
	Mycousfurans A and B, Antibacterial Usnic Acid Congeners from the Fungus Mycosphaerella sp., Isolated from a Marine Sediment.	Lee J, Lee J, Kim GJ, Yang I, Wang W, Nam JW, Choi H, Nam SJ, Kang H.	Mar Drugs	10.3390/md17070422	2019
	Antibacterial Secondary Metabolites from Marine-Derived Fungus Aspergillus sp. IMCASMF180035.	Song F, Lin R, Yang N, Jia J, Wei S, Han J, Li J, Bi H, Xu X.	Antibiotics (Basel)	10.3390/antibiotics10040377	2021
	A bioorthogonal chemistry approach to detect the K1 polysialic acid capsule in Escherichia coli.	Rigolot V, Rossez Y, Biot C, Lion C.	RSC Chem Biol	10.1039/d2cb00219a	2023
	Biodegradable polycaprolactone metallopolymer-antibiotic bioconjugates containing phenylboronic acid and cobaltocenium for antimicrobial application.	Yang P, Luo Y, Kurnaz LB, Bam M, Yang X, Decho AW, Nagarkatti M, Tang C.	Biomater Sci	10.1039/d1bm00970b	2021
	Antitumor effect of Escherichia coli-derived outer membrane vesicles on neuroblastoma in vitro and in vivo.	Jin L, Zhang Z, Tan X, Wang Z, Tang B, Wang Z, Li M, Mi T, Shen L, Long C, Wei G, He D.	Acta Biochim Biophys Sin (Shanghai)	10.3724/abbs.2022127	2022
	Persistence of Escherichia coli in the microbiomes of red Romaine lettuce (Lactuca sativa cv. 'Outredgeous') and mizuna mustard (Brassica rapa var. japonica) - does seed sanitization matter?	Dixit AR, Khodadad CLM, Hummerick ME, Spern CJ, Spencer LE, Fischer JA, Curry AB, Gooden JL, Maldonado Vazquez GJ, Wheeler RM, Massa GD, Romeyn MW.	BMC Microbiol	10.1186/s12866-021-02345-5	2021
	Basic amino acid-mediated cationic amphiphilic surfaces for antimicrobial pH monitoring sensor with wound healing effects.	Lee DU, Kim SC, Choi DY, Jung WK, Moon MJ.	Biomater Res	10.1186/s40824-023-00355-0	2023
	Unraveling the Secrets of Colistin Resistance with Label-Free Raman Spectroscopy.	Saikia D, Jadhav P, Hole AR, Krishna CM, Singh SP.	Biosensors (Basel)	10.3390/bios12090749	2022
Phylogeny	Accelerating the Detection of Bacteria in Food Using Artificial Intelligence and Optical Imaging.	Ma L, Yi J, Wisuthiphaet N, Earles M, Nitin N.	Appl Environ Microbiol	10.1128/aem.01828-22	2023
	Identification and Biological Activity of NFAT-133 Congeners from Streptomyces pactum.	Zhou W, Posri P, Liu XJ, Ju Z, Lan WJ, Mahmud T.	J Nat Prod	10.1021/acs.jnatprod.1c00152	2021
	Characterization of the probiotic properties of Lacticaseibacillus rhamnosus LR6 isolated from the vaginas of healthy Korean women against vaginal pathogens.	Chung Y, Kang SB, Son D, Lee JY, Chung MJ, Lim S.	Front Microbiol	10.3389/fmicb.2023.1308293	2023
	Novel sesquiterpenoids isolated from Chimonanthus praecox and their antibacterial activities.	Lou HY, Zhang Y, Ma XP, Jiang S, Wang XP, Yi P, Liang GY, Wu HM, Feng J, Jin FY, Pan WD.	Chin J Nat Med	10.1016/s1875-5364(18)30100-6	2018
	Discovery of a Novel Lineage Burkholderia cepacia ST 1870 Endophytically Isolated from Medicinal Polygala paniculata Which Shows Potent In Vitro Antileishmanial and Antimicrobial Effects.	de Paula Nogueira Cruz F, Ferreira de Paula A, Nogueira CT, Marques de Andrade PH, Borges LM, Lacava PT, Baratella da Cunha Camargo IL, Anibal FF, Paiva de Sousa C.	Int J Microbiol	10.1155/2021/6618559	2021
	Acrylic Bone Cements Modified with Graphene Oxide: Mechanical, Physical, and Antibacterial Properties.	Zapata MEV, Ruiz Rojas LM, Mina Hernandez JH, Delgado-Ospina J, Tovar CDG.	Polymers (Basel)	10.3390/polym12081773	2020
	Elicitation of Stress-Induced Phenolic Metabolites for Antimicrobial Applications against Foodborne Human Bacterial Pathogens.	Christopher A, Sarkar D, Shetty K.	Antibiotics (Basel)	10.3390/antibiotics10020109	2021
	Sonochemical synthesis of a copper reduced graphene oxide nanocomposite using honey and evaluation of its antibacterial and cytotoxic activities.	Ismail NA, Shameli K, Mohamad Sukri SNA, Hara H, Teow SY, Moeini H.	Front Mol Biosci	10.3389/fmolb.2022.995853	2022
	An In Vitro Small Intestine Model Incorporating a Food Matrix and Bacterial Mock Community for Intestinal Function Testing.	Malik M, Tanzman JV, Dash SK, Marques CNH, Mahler GJ.	Microorganisms	10.3390/microorganisms11061419	2023
Enzymology	Automated analysis of food-borne pathogens using a novel microbial cell culture, sensing and classification system.	Xiang K, Li Y, Ford W, Land W, Schaffer JD, Congdon R, Zhang J, Sadik O.	Analyst	10.1039/c5an02614h	2016
	Green Synthesis of Controlled Shape Silver Nanostructures and Their Peroxidase, Catalytic Degradation, and Antibacterial Activity.	Shafiq A, Deshmukh AR, AbouAitah K, Kim BS.	J Funct Biomater	10.3390/jfb14060325	2023
	Dielectric Barrier Discharge for Solid Food Applications.	Figueroa-Pinochet MF, Castro-Alija MJ, Tiwari BK, Jimenez JM, Lopez-Vallecillo M, Cao MJ, Albertos I.	Nutrients	10.3390/nu14214653	2022
	Two New Piperazine-Triones from a Marine-Derived Streptomycetes sp. Strain SMS636.	Xu X, Han J, Lin R, Polyak SW, Song F.	Mar Drugs	10.3390/md17030186	2019
Phylogeny	Exploring Saduria entomon (Crustacea Isopoda) as a New Source for Chitin and Chitosan Isolation.	Rodriguez-Veiga I, Acosta N, Aranaz I, Dobrzycka-Krahel A.	Int J Mol Sci	10.3390/ijms232416125	2022
	Potential Application of Apilactobacillus kunkeei for Human Use: Evaluation of Probiotic and Functional Properties.	Vergalito F, Testa B, Cozzolino A, Letizia F, Succi M, Lombardi SJ, Tremonte P, Pannella G, Di Marco R, Sorrentino E, Coppola R, Iorizzo M.	Foods	10.3390/foods9111535	2020
	Synergistic bactericide and antibiotic effects of dimeric, tetrameric, or palindromic peptides containing the RWQWR motif against Gram-positive and Gram-negative strains.	Vargas-Casanova Y, Rodriguez-Mayor AV, Cardenas KJ, Leal-Castro AL, Munoz-Molina LC, Fierro-Medina R, Rivera-Monroy ZJ, Garcia-Castaneda JE.	RSC Adv	10.1039/c9ra00708c	2019
	A Novel Biocidal Nanocomposite: Spherical Silica with Silver Ions Anchored at the Surface.	Laskowska M, Kowalczyk P, Karczmarska A, Kramkowski K, Wrzosek K, Laskowski L.	Int J Mol Sci	10.3390/ijms24010545	2022
	In Vitro Assessment of Bio-Functional Properties from Lactiplantibacillus plantarum Strains.	Letizia F, Albanese G, Testa B, Vergalito F, Bagnoli D, Di Martino C, Carillo P, Verrillo L, Succi M, Sorrentino E, Coppola R, Tremonte P, Lombardi SJ, Di Marco R, Iorizzo M.	Curr Issues Mol Biol	10.3390/cimb44050158	2022
	Discovering the anti-diabetic potential of pomegranate peel metabolites by examining molecular interplay with the thioredoxin-interacting protein.	Aslam T, Arif A, Arshad S, Muccee F, Ahmad K, Iqbal MO, Khalil U, Razak S, Afsar T, Almajwal A, Shafique H, Zain M.	Front Med (Lausanne)	10.3389/fmed.2023.1322450	2023
Pathogenicity	The bactericidal effect of dendritic copper microparticles, contained in an alginate matrix, on Escherichia coli.	Thomas SF, Rooks P, Rudin F, Atkinson S, Goddard P, Bransgrove R, Mason PT, Allen MJ.	PLoS One	10.1371/journal.pone.0096225	2014
	Controllable Nitric Oxide Storage and Release in Cu-BTC: Crystallographic Insights and Bioactivity.	Lee DN, Kim YR, Yang S, Tran NM, Park BJ, Lee SJ, Kim Y, Yoo H, Kim SJ, Shin JH.	Int J Mol Sci	10.3390/ijms23169098	2022
	The synthesis of extracellular vesicles by the protistan parasite Blastocystis.	Leonardi SS, Koh EY, Deng L, Huang C, Tong L, Wang JW, Tan KS.	Front Cell Infect Microbiol	10.3389/fcimb.2022.1019789	2022
	Investigation of gut microbiota and short-chain fatty acids in Strongyloides stercoralis-infected patients in a rural community.	Nguyen HT, Hongsrichan N, Intuyod K, Pinlaor P, Yingklang M, Chaidee A, Sengthong C, Pongking T, Dangtakot R, Banjong D, Anutrakulchai S, Cha'on U, Pinlaor S.	Biosci Microbiota Food Health	10.12938/bmfh.2021-054	2022
Transcriptome	Deciphering Novel Antimicrobial Peptides from the Transcriptome of Papilio xuthus.	Lee JH, Chung H, Shin YP, Kim MA, Natarajan S, Veerappan K, Kim SH, Park J, Hwang JS.	Insects	10.3390/insects11110776	2020
Genetics	In-depth characterization of denitrifier communities across different soil ecosystems in the tundra.	Pessi IS, Viitamaki S, Virkkala AM, Eronen-Rasimus E, Delmont TO, Marushchak ME, Luoto M, Hultman J.	Environ Microbiome	10.1186/s40793-022-00424-2	2022
	TDAG51 promotes transcription factor FoxO1 activity during LPS-induced inflammatory responses.	Park ES, Jeon H, Lee N, Yu J, Park HW, Satoh T, Akira S, Furuyama T, Lee CH, Choi JS, Rho J.	EMBO J	10.15252/embj.2022111867	2023
	Antibacterial activity of Citrus limonum fruit juice extract.	Okeke MI, Okoli AS, Eze EN, Ekwume GC, Okosa EU, Iroegbu CU.	Pak J Pharm Sci		2015
	Geographic Variability of Berry Phytochemicals with Antioxidant and Antimicrobial Properties.	Georgescu C, Frum A, Virchea LI, Sumacheva A, Shamtsyan M, Gligor FG, Olah NK, Mathe E, Mironescu M.	Molecules	10.3390/molecules27154986	2022
	Green Production of Functionalized Few-Layer Graphene-Silver Nanocomposites Using Gallnut Extract for Antibacterial Application.	Bu Y, Kushwaha A, Goswami L, Kim BS.	Micromachines (Basel)	10.3390/mi13081232	2022
	In Vitro Antidiabetic, Antioxidant Activity, and Probiotic Activities of Lactiplantibacillus plantarum and Lacticaseibacillus paracasei Strains.	Won G, Choi SI, Park N, Kim JE, Kang CH, Kim GH.	Curr Microbiol	10.1007/s00284-021-02588-5	2021
	Exploring the Bioactive Potential of Calostoma insigne, an Endangered Culinary Puffball Mushroom, from Northeastern Thailand.	Saengha W, Karirat T, Pitisin N, Plangklang S, Butkhup L, Udomwong P, Ma NL, Konsue A, Chanthaket P, Katisart T, Luang-In V.	Foods	10.3390/foods13010113	2023
	Latent Tuberculosis: A Promising New Compound to Treat Non-Replicating and Intramacrophagic Mycobacteria.	Campos DL, Demarqui FM, Solcia MC, de Souza PC, da Silva Maia PI, Deflon VM, Pavan FR.	Biomedicines	10.3390/biomedicines10102398	2022
Genetics	Spatial ecology of Haemophilus and Aggregatibacter in the human oral cavity.	Giacomini JJ, Torres-Morales J, Tang J, Dewhirst FE, Borisy GG, Mark Welch JL.	Microbiol Spectr	10.1128/spectrum.04017-23	2024
	Antibacterial, Mutagenic Properties and Chemical Characterisation of Sugar Bush (Protea caffra Meisn.): A South African Native Shrub Species.	Vambe M, Aremu AO, Aremu AO, Chukwujekwu JC, Gruz J, Luterova A, Finnie JF, Van Staden J.	Plants (Basel)	10.3390/plants9101331	2020
	Increased zinc levels facilitate phenotypic detection of ceftazidime-avibactam resistance in metallo-beta-lactamase-producing Gram-negative bacteria.	Simon M, Gerlach RG, Pfeifer Y, Pfennigwerth N, Gatermann SG, Schroder A, Hiergeist A, Hamprecht A, Rugamer T, Gessner A, Jantsch J.	Front Microbiol	10.3389/fmicb.2022.977330	2022
Metabolism	Novel Macrolactams from a Deep-Sea-Derived Streptomyces Species.	Wang P, Wang D, Zhang R, Wang Y, Kong F, Fu P, Zhu W.	Mar Drugs	10.3390/md19010013	2020
Phylogeny	Virulence gene transcription, phylogroups, and antibiotic resistance of cervico-vaginal pathogenic E. coli in Mexico.	Monroy-Perez E, Ceron AB, Garcia Cortes LR, Alonso NN, Alonso NN, Dominguez-Trejo P, Hernandez-Jaimes T, Bustos-Martinez J, Hamdan-Partida A, Rojas Jimenez EA, Vaca S, Vaca-Paniagua F, Paniagua-Contreras GL.	PLoS One	10.1371/journal.pone.0234730	2020
	Noonindoles A-F: Rare Indole Diterpene Amino Acid Conjugates from a Marine-Derived Fungus, Aspergillus noonimiae CMB-M0339.	Kankanamge S, Khalil ZG, Bernhardt PV, Capon RJ.	Mar Drugs	10.3390/md20110698	2022
Pathogenicity	Cationic Intrinsically Disordered Antimicrobial Peptides (CIDAMPs) Represent a New Paradigm of Innate Defense with a Potential for Novel Anti-Infectives.	Latendorf T, Gerstel U, Wu Z, Bartels J, Becker A, Tholey A, Schroder JM.	Sci Rep	10.1038/s41598-019-39219-w	2019
Enzymology	The Mucosally-Adherent Rectal Microbiota Contains Features Unique to Alcohol-Related Cirrhosis.	Shen TD, Daniel SG, Patel S, Kaplan E, Phung L, Lemelle-Thomas K, Chau L, Herman L, Trisolini C, Stonelake A, Toal E, Khungar V, Bittinger K, Reddy KR, Wu GD.	Gut Microbes	10.1080/19490976.2021.1987781	2021
Metabolism	Enterobacteriaceae Growth Promotion by Intestinal Acylcarnitines, a Biomarker of Dysbiosis in Inflammatory Bowel Disease.	Lemons JMS, Conrad M, Tanes C, Chen J, Friedman ES, Roggiani M, Curry D, Chau L, Hecht AL, Harling L, Vales J, Kachelries KE, Baldassano RN, Goulian M, Bittinger K, Master SR, Liu L, Wu GD.	Cell Mol Gastroenterol Hepatol	10.1016/j.jcmgh.2023.09.005	2024
	Hornerin contains a Linked Series of Ribosome-Targeting Peptide Antibiotics.	Gerstel U, Latendorf T, Bartels J, Becker A, Tholey A, Schroder JM.	Sci Rep	10.1038/s41598-018-34467-8	2018
	Silver Nanoparticles of Artemisia sieberi Extracts: Chemical Composition and Antimicrobial Activities.	Al-Otibi F, Alshammry NA, Alharbi RI, Bin-Jumah MN, AlSubaie MM.	Plants (Basel)	10.3390/plants12112093	2023
	Antioxidant, Antimicrobial, and Metabolomic Characterization of Blanched Pomegranate Peel Extracts: Effect of Cultivar.	Magangana TP, Makunga NP, Fawole OA, Fawole OA, Stander MA, Opara UL.	Molecules	10.3390/molecules27092979	2022
	Design, Synthesis, and Characterization of Novel Bis-Uracil Chitosan Hydrogels Modified with Zinc Oxide Nanoparticles for Boosting Their Antimicrobial Activity.	Alharbi RA, Alminderej FM, Al-Harby NF, Elmehbad NY, Mohamed NA.	Polymers (Basel)	10.3390/polym15040980	2023
Genetics	Synthetic spike-in standards for high-throughput 16S rRNA gene amplicon sequencing.	Tourlousse DM, Yoshiike S, Ohashi A, Matsukura S, Noda N, Sekiguchi Y.	Nucleic Acids Res	10.1093/nar/gkw984	2017
	Analytical Performance Characteristics of a New Transcription-Mediated Amplification Assay for Treponema pallidum.	Getman D, Lin M, Barakat N, Skvoretz R, Godornes C, Swenson P, Nenninger A, Golden MR, Lukehart SA.	J Clin Microbiol	10.1128/jcm.00511-21	2021
Enzymology	The Potential of Sun-Dried Grape Pomace as a Multi-Functional Ingredient for Herbal Infusion: Effects of Brewing Parameters on Composition and Bioactivity.	Goulas V, Stavrou K, Michael C, Botsaris G, Barbouti A.	Antioxidants (Basel)	10.3390/antiox10040586	2021
	Antibacterial and antioxidant properties of crude extract, fractions and compounds from the stem bark of Polyscias fulva Hiern (Araliaceae).	Njateng GS, Du Z, Gatsing D, Mouokeu RS, Liu Y, Zang HX, Gu J, Luo X, Kuiate JR.	BMC Complement Altern Med	10.1186/s12906-017-1572-z	2017
	Biocomposite Hydrogels for the Treatment of Bacterial Infections: Physicochemical Characterization and In Vitro Assessment.	Rata DM, Cadinoiu AN, Popa M, Atanase LI, Daraba OM, Popescu I, Romila LE, Ichim DL.	Pharmaceutics	10.3390/pharmaceutics13122079	2021
	Antibacterial and Antioxidant Activity of Dysphania ambrosioides (L.) Mosyakin and Clemants Essential Oils: Experimental and Computational Approaches.	Kandsi F, Elbouzidi A, Lafdil FZ, Meskali N, Azghar A, Addi M, Hano C, Maleb A, Gseyra N.	Antibiotics (Basel)	10.3390/antibiotics11040482	2022
	Exploiting Polyhydroxyalkanoates for Biomedical Applications.	Kalia VC, Patel SKS, Lee JK.	Polymers (Basel)	10.3390/polym15081937	2023
	A novel multiplex PCR method for the detection of virulence-associated genes of Escherichia coli O157:H7 in food.	Van Giau V, Nguyen TT, Nguyen TKO, Le TTH, Nguyen TD.	3 Biotech	10.1007/s13205-015-0319-0	2016
	Influence of Bacterial Competitors on Salmonella enterica and Enterohemorrhagic Escherichia coli Growth in Microbiological Media and Attachment to Vegetable Seeds.	Liu D, Walcott R, Mis Solval K, Chen J.	Foods	10.3390/foods10020285	2021
	Functional Antimicrobial Surface Coatings Deposited onto Nanostructured 316L Food-Grade Stainless Steel.	Gonzalez AS, Riego A, Vega V, Garcia J, Galie S, Gutierrez Del Rio I, Martinez de Yuso MDV, Villar CJ, Lombo F, De la Prida VM.	Nanomaterials (Basel)	10.3390/nano11041055	2021
	Chemical profiling of volatile compounds of the essential oil of grey-leaved rockrose (Cistus albidus L.) and its antioxidant, anti-inflammatory, antibacterial, antifungal, and anticancer activity in vitro and in silico.	Elbouzidi A, Taibi M, Laaraj S, Loukili EH, Haddou M, El Hachlafi N, Naceiri Mrabti H, Baraich A, Bellaouchi R, Asehraou A, Bourhia M, Nafidi HA, Bin Jardan YA, Chaabane K, Addi M.	Front Chem	10.3389/fchem.2024.1334028	2024
	Cell-Free Systems: Ideal Platforms for Accelerating the Discovery and Production of Peptide-Based Antibiotics.	Park H, Jin H, Kim D, Lee J.	Int J Mol Sci	10.3390/ijms25169109	2024
	Pharmacological Activities of Zingiber officinale Roscoe: Inhibition of HSA Protein Glycation, Structure Stability and Function Restoration.	Khan MWA, Sherwani S, Alshammari MHE, Alsukaibi AKD, Khan WA, Haque A, Alenezi KM, Shahab U.	Pharmaceuticals (Basel)	10.3390/ph17111469	2024
Pathogenicity	The botanical origin and antioxidant, anti-BACE1 and antiproliferative properties of bee pollen from different regions of South Korea.	Zou Y, Hu J, Huang W, Zhu L, Shao M, Dordoe C, Ahn YJ, Wang D, Zhao Y, Xiong Y, Wang X.	BMC Complement Med Ther	10.1186/s12906-020-03023-1	2020
	Multiplex PCR for simultaneous identification of E. coli O157:H7, Salmonella spp. and L. monocytogenes in food.	Nguyen TT, Van Giau V, Vo TK.	3 Biotech	10.1007/s13205-016-0523-6	2016
	Characterization of Sodium Alginate-Based Films Blended with Olive Leaf and Laurel Leaf Extracts Obtained by Ultrasound-Assisted Technology	Moura-Alves M, Souza V, Silva J, Esteves A, Pastrana L, Saraiva C, Cerqueira M.	Foods		2023
	Chemical, Microbiological, and Functional Characterization of Kefir Produced from Cow's Milk and Soy Milk.	Gamba RR, Yamamoto S, Abdel-Hamid M, Sasaki T, Michihata T, Koyanagi T, Enomoto T.	Int J Microbiol	10.1155/2020/7019286	2020
	Molecular Typing and Antimicrobial Susceptibility Profiles of Streptococcus uberis Isolated from Sheep Milk.	Rosa NM, Dupre I, Azara E, Longheu CM, Tola S.	Pathogens	10.3390/pathogens10111489	2021
	Antioxidant Potential and Antibacterial Efficiency of Caffeic Acid-Functionalized ZnO Nanoparticles.	Choi KH, Nam KC, Lee SY, Cho G, Jung JS, Kim HJ, Park BJ.	Nanomaterials (Basel)	10.3390/nano7060148	2017
	Multimodal profiling of term human decidua demonstrates immune adaptations with pregravid obesity.	Sureshchandra S, Doratt BM, True H, Mendoza N, Rincon M, Marshall NE, Messaoudi I.	Cell Rep	10.1016/j.celrep.2023.112769	2023
	Two New Spiro-Heterocyclic gamma-Lactams from A Marine-Derived Aspergillus fumigatus Strain CUGBMF170049.	Xu X, Han J, Wang Y, Lin R, Yang H, Li J, Wei S, Polyak SW, Song F.	Mar Drugs	10.3390/md17050289	2019
	Probiotic Potentiality from Versatile Lactiplantibacillus plantarum Strains as Resource to Enhance Freshwater Fish Health.	Iorizzo M, Albanese G, Letizia F, Testa B, Tremonte P, Vergalito F, Lombardi SJ, Succi M, Coppola R, Sorrentino E.	Microorganisms	10.3390/microorganisms10020463	2022
Enzymology	Review of phenotypic assays for detection of extended-spectrum beta-lactamases and carbapenemases: a microbiology laboratory bench guide.	Aruhomukama D.	Afr Health Sci	10.4314/ahs.v20i3.11	2020
	Rapid Characterization of Bacterial Lipids with Ambient Ionization Mass Spectrometry for Species Differentiation.	Su H, Jiang ZH, Chiou SF, Shiea J, Wu DC, Tseng SP, Jain SH, Chang CY, Lu PL.	Molecules	10.3390/molecules27092772	2022
	Chemical and antibacterial data of synthesized thioureido derivatives.	Kadir MA, Ramli R, Yusof MSM, Ismail N, Ngah N, Haris NSH.	Data Brief	10.1016/j.dib.2019.104651	2019
	Effect of storage on plant biostimulant and bioactive properties of freeze-dried Chlorella vulgaris biomass.	Stirk WA, Balint P, Vambe M, Kulkarni MG, van Staden J, Ordog V.	J Appl Phycol	10.1007/s10811-021-02596-9	2021
	Gamma-aminobutyric acid fermentation in MRS-based medium by the fructophilic Lactiplantibacillus plantarum Y7.	Kim J, Yoon YW, Kim MS, Lee MH, Kim GA, Bae K, Yoon SS.	Food Sci Biotechnol	10.1007/s10068-022-01035-w	2022
	Antibacterial activity of the micro and nanostructures of the optical material tris(8-hydroxyquinoline)aluminum and its application as an antimicrobial coating.	Saeed A, Madkhli AY, Pashameah RA, Bataweel NM, Razvi MA, Salah N.	RSC Adv	10.1039/d2ra04750k	2022
	Novel cationic cryptides in Penaeus vannamei demonstrate antimicrobial and anti-cancer activities.	Abd El-Aal AAA, Jayakumar FA, Lahiri C, Tan KO, Reginald K.	Sci Rep	10.1038/s41598-023-41581-9	2023
	Consumption of Extruded Sorghum SC319 Improved Gut Microbiota at Genus Level and Reduced Anthropometric Markers in Men with Overweight: A Randomized Controlled Clinical Trial.	Lucio H, Anunciacao P, da Silva B, da Silva A, Queiroz V, de Carvalho C, Pinheiro-Sant'Ana H, Martino H.	Nutrients	10.3390/nu15173786	2023
	MicroMundo Upside Down: Targeted Searching for Antibiotics-Producing Bacteria From Soil With Reverse Antibiosis Approaches.	Alvarado M, Clemente-Casares P, Moreno DA, de Groot PWJ.	Front Microbiol	10.3389/fmicb.2020.577550	2020
	The ethnomedicine, phytochemistry, and pharmacological properties of the genus Bersama: current review and future perspectives.	Nigussie G, Ashenef S, Meresa A.	Front Pharmacol	10.3389/fphar.2024.1366427	2024
	Customised structural, optical and antibacterial characteristics of cinnamon nanoclusters produced inside organic solvent using 532 nm Q-switched Nd:YAG-pulse laser ablation.	Salim AA, Bakhtiar H, Ghoshal SK, Huyop F.	Opt Laser Technol	10.1016/j.optlastec.2020.106331	2020
Pathogenicity	Genetic and antimicrobial resistance profiles of non-O157 Shiga toxin-producing Escherichia coli from different sources in Egypt.	Elsayed MSAE, Eldsouky SM, Roshdy T, Bayoume AMA, Nasr GM, Salama ASA, Akl BA, Hasan AS, Shahat AK, Khashaba RA, Abdelhalim WA, Nasr HE, Mohammed LA, Salah A.	BMC Microbiol	10.1186/s12866-021-02308-w	2021
	Small molecule-decorated gold nanoparticles for preparing antibiofilm fabrics.	Wang L, Natan M, Zheng W, Zheng W, Liu S, Jacobi G, Perelshtein I, Gedanken A, Banin E, Jiang X.	Nanoscale Adv	10.1039/d0na00179a	2020
	Potential Antimicrobial and Anticancer Activities of an Ethanol Extract from Bouea macrophylla.	Nguyen NH, Nguyen TT, Ma PC, Ta QTH, Duong TH, Vo VG.	Molecules	10.3390/molecules25081996	2020
	Does Use of Lidocaine Affect Culture of Synovial Fluid Obtained to Diagnose Periprosthetic Joint Infection (PJI)? An In Vitro Study.	Liu K, Ye L, Sun W, Hao L, Luo Y, Chen J.	Med Sci Monit	10.12659/msm.908585	2018
	Gut microbiome pattern in adolescents with functional gastrointestinal disease.	Nafarin AR, Hegar B, Sjakti HA, Vandenplas Y.	Int J Pediatr Adolesc Med	10.1016/j.ijpam.2019.01.005	2019
	A practical introduction to microbial molecular ecology through the use of isolation chips.	Alessi AM, Redeker KR, Chong JPJ.	Ecol Evol	10.1002/ece3.4748	2018
	Microencapsulation of Cymbopogon citratus D.C. Stapf Essential Oil with Spray Drying: Development, Characterization, and Antioxidant and Antibacterial Activities.	de Oliveira Alencar DD, de Souza EL, da Cruz Almeida ET, da Silva AL, Oliveira HML, Cavalcanti MT.	Foods	10.3390/foods11081111	2022
	Antimicrobial Biodegradable Food Packaging Based on Chitosan and Metal/Metal-Oxide Bio-Nanocomposites: A Review.	Babaei-Ghazvini A, Acharya B, Korber DR.	Polymers (Basel)	10.3390/polym13162790	2021
	Effect of Hurdle Approaches Using Conventional and Moderate Thermal Processing Technologies for Microbial Inactivation in Fruit and Vegetable Products.	Soni A, Brightwell G.	Foods	10.3390/foods11121811	2022
	600-ns pulsed electric fields affect inactivation and antibiotic susceptibilities of Escherichia coli and Lactobacillus acidophilus.	Martens SL, Klein S, Barnes RA, TrejoSanchez P, Roth CC, Ibey BL.	AMB Express	10.1186/s13568-020-00991-y	2020
	Biocidal Agents Used for Disinfection Can Enhance Antibiotic Resistance in Gram-Negative Species.	Kampf G.	Antibiotics (Basel)	10.3390/antibiotics7040110	2018
Metabolism	New Hydroxydecanoic Acid Derivatives Produced by an Dndophytic Yeast Aureobasidium pullulans AJF1 from Flowers of Aconitum carmichaeli.	Choi HG, Kim JW, Choi H, Kang KS, Shim SH.	Molecules	10.3390/molecules24224051	2019
	Gold Nanoparticles with Antibiotic-Metallopolymers toward Broad-Spectrum Antibacterial Effects.	Yang P, Pageni P, Rahman MA, Bam M, Zhu T, Chen YP, Nagarkatti M, Decho AW, Tang C.	Adv Healthc Mater	10.1002/adhm.201800854	2019
	The viabilities of cells in cultures of Escherichia coli growing with formation of filaments at 6 °C.	Visvalingam J, Gill CO, Holley RA.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2011.10.027	2012
	Antioxidant and Antibacterial Activity of Four Tannins Isolated from Different Sources and Their Effect on the Shelf-Life Extension of Vacuum-Packed Minced Meat.	Nguyen CNM, Nirmal NP, Sultanbawa Y, Ziora ZM.	Foods	10.3390/foods12020354	2023
Pathogenicity	Growth-Inhibiting and morphostructural effects of constituents identified in Asarum heterotropoides root on human intestinal bacteria.	Perumalsamy H, Jung MY, Hong SM, Ahn YJ.	BMC Complement Altern Med	10.1186/1472-6882-13-245	2013
Biotechnology	Phenolic Compounds in Bacterial Inactivation: A Perspective from Brazil.	Kauffmann AC, Castro VS.	Antibiotics (Basel)	10.3390/antibiotics12040645	2023
Biotechnology	Holm Oak (Quercus ilex subsp. ballota (Desf.) Samp.) Bark Aqueous Ammonia Extract for the Control of Invasive Forest Pathogens.	Sanchez-Hernandez E, Balduque-Gil J, Barriuso-Vargas JJ, Casanova-Gascon J, Gonzalez-Garcia V, Cuchi-Oterino JA, Lorenzo-Vidal B, Martin-Gil J, Martin-Ramos P.	Int J Mol Sci	10.3390/ijms231911882	2022
Transcriptome	Transcriptome Analysis of Psacothea hilaris: De Novo Assembly and Antimicrobial Peptide Prediction.	Lee JH, Chung H, Shin YP, Kim IW, Natarajan S, Veerappan K, Seo M, Park J, Hwang JS.	Insects	10.3390/insects11100676	2020
	Novel one-pot synthesis of a library of 2-aryloxy-1,4-naphthoquinone derivatives. Determination of antifungal and antibacterial activity.	Chaves-Carballo K, Lamoureux GV, Perez AL, Bella Cruz A, Cechinel Filho V.	RSC Adv	10.1039/d2ra01814d	2022
	Straw Wine Melanoidins as Potential Multifunctional Agents: Insight into Antioxidant, Antibacterial, and Angiotensin-I-Converting Enzyme Inhibition Effects.	Goulas V, Nicolaou D, Botsaris G, Barbouti A.	Biomedicines	10.3390/biomedicines6030083	2018
Metabolism	New from Old: Thorectandrin Alkaloids in a Southern Australian Marine Sponge, Thorectandra choanoides (CMB-01889).	Khushi S, Salim AA, Elbanna AH, Nahar L, Capon RJ.	Mar Drugs	10.3390/md19020097	2021
	Aflatoxin B₁ Degradation and Detoxification by Escherichia coli CG1061 Isolated From Chicken Cecum.	Wang L, Wu J, Liu Z, Shi Y, Liu J, Xu X, Hao S, Mu P, Deng F, Deng Y.	Front Pharmacol	10.3389/fphar.2018.01548	2018
	Antibacterial Potential of Secondary Metabolites from Indonesian Marine Bacterial Symbionts.	Nofiani R, Weisberg AJ, Tsunoda T, Panjaitan RGP, Brilliantoro R, Chang JH, Philmus B, Mahmud T.	Int J Microbiol	10.1155/2020/8898631	2020
Phylogeny	Propagule pressure increase and phylogenetic diversity decrease community's susceptibility to invasion.	Ketola T, Saarinen K, Lindstrom L.	BMC Ecol	10.1186/s12898-017-0126-z	2017
	Recyclable magnetic nanoparticles grafted with antimicrobial metallopolymer-antibiotic bioconjugates.	Pageni P, Yang P, Bam M, Zhu T, Chen YP, Decho AW, Nagarkatti M, Tang C.	Biomaterials	10.1016/j.biomaterials.2018.05.007	2018
	Expanding the Chemical Diversity of Secondary Metabolites Produced by Two Marine-Derived Enterocin- and Wailupemycin-Producing Streptomyces Strains.	Xia K, Shang J, Sun J, Zhu W, Fu P.	ACS Omega	10.1021/acsomega.3c04199	2023
	Abundance of Gut Microbiota, Concentration of Short-Chain Fatty Acids, and Inflammatory Markers Associated with Elevated Body Fat, Overweight, and Obesity in Female Adolescents.	Miranda VPN, Dos Santos Amorim PR, Bastos RR, de Faria ER, de Castro Moreira ME, do Carmo Castro Franceschini S, do Carmo Gouveia Peluzio M, de Luces Fortes Ferreira CL, Priore SE.	Mediators Inflamm	10.1155/2019/7346863	2019
	Limonoid and Steroidal Saponin from Azadirachta indica.	Liu L, Zhao YL, Cheng GG, Chen YY, Qin XJ, Song CW, Yang XW, Liu YP, Luo XD.	Nat Prod Bioprospect	10.1007/s13659-014-0042-2	2014
	Ultrasound Assisted Green Synthesis of Silver and Iron Oxide Nanoparticles Using Fenugreek Seed Extract and Their Enhanced Antibacterial and Antioxidant Activities.	Deshmukh AR, Gupta A, Kim BS.	Biomed Res Int	10.1155/2019/1714358	2019
	Analytical Investigation of Cymbopogon citratus and Exploiting the Potential of Developed Silver Nanoparticle Against the Dominating Species of Pathogenic Bacteria.	Basera P, Lavania M, Agnihotri A, Lal B.	Front Microbiol	10.3389/fmicb.2019.00282	2019
	Evaluation of ultraviolet (UV-C) light treatment for microbial inactivation in agricultural waters with different levels of turbidity.	Adhikari A, Parraga Estrada KJ, Chhetri VS, Janes M, Fontenot K, Beaulieu JC.	Food Sci Nutr	10.1002/fsn3.1412	2020
	Effects of green tea on Escherichia coli as a uropathogen.	Noormandi A, Dabaghzadeh F.	J Tradit Complement Med	10.1016/j.jtcme.2014.10.005	2015
Proteome	Direct detection of OXA-48-like carbapenemase variants with and without co-expression of an extended-spectrum beta-lactamase from bacterial cell lysates using mass spectrometry.	McGee WM, Verma A, Viirtola M, Kronewitter SR, Neil JR, Stephenson JL.	J Mass Spectrom Adv Clin Lab	10.1016/j.jmsacl.2021.05.001	2021
Enzymology	Evaluation of Different Dose-Response Models for High Hydrostatic Pressure Inactivation of Microorganisms.	Buzrul S.	Foods	10.3390/foods6090079	2017
	Distribution of Integrons and Phylogenetic Groups among Enteropathogenic Escherichia coli Isolates from Children <5 Years of Age in Delhi, India.	Singh T, Das S, Ramachandran VG, Wani S, Shah D, Maroof KA, Sharma A.	Front Microbiol	10.3389/fmicb.2017.00561	2017
Pathogenicity	Synergistic effects of combinatorial chitosan and polyphenol biomolecules on enhanced antibacterial activity of biofunctionalaized silver nanoparticles.	Rezazadeh NH, Buazar F, Matroodi S.	Sci Rep	10.1038/s41598-020-76726-7	2020
	Efficient production of mannosylerythritol lipids by a marine yeast Moesziomyces aphidis XM01 and their application as self-assembly nanomicelles.	Yu G, Wang X, Zhang C, Chi Z, Chi Z, Liu G.	Mar Life Sci Technol	10.1007/s42995-022-00135-0	2022
Metabolism	Interaction studies of novel cell selective antimicrobial peptides with model membranes and E. coli ATCC 11775.	Joshi S, Bisht GS, Rawat DS, Kumar A, Kumar R, Maiti S, Pasha S.	Biochim Biophys Acta	10.1016/j.bbamem.2010.06.016	2010
	Antimicrobial Activity of a Vaginal Gel Formulation: Considerations Related to Vaginal Infection and Dysbiosis.	De Seta F, Larsen B.	Pathogens	10.3390/pathogens10121576	2021
	Scopularides Revisited: Molecular Networking Guided Exploration of Lipodepsipeptides in Australian Marine Fish Gastrointestinal Tract-Derived Fungi.	Elbanna AH, Khalil ZG, Bernhardt PV, Capon RJ.	Mar Drugs	10.3390/md17080475	2019
	Structural revision of sesbagrandiflorains A and B, and synthesis and biological evaluation of 6-methoxy-2-arylbenzofuran derivatives.	Noviany N, Samadi A, Carpenter EL, Abugrain ME, Hadi S, Purwitasari N, Indra G, Indra A, Mahmud T.	J Nat Med	10.1007/s11418-020-01445-2	2021
	Vitamin E for Prevention of Biofilm-caused Healthcare-associated Infections.	Vergalito F, Pietrangelo L, Petronio Petronio G, Colitto F, Alfio Cutuli M, Magnifico I, Venditti N, Guerra G, Di Marco R.	Open Med (Wars)	10.1515/med-2020-0004	2018
	Nutritional, Antioxidant, Antimicrobial, and Anticholinesterase Properties of Phyllanthus emblica: A Study Supported by Spectroscopic and Computational Investigations.	Orabi MAA, Hasan AH, AbouZid SF, El Amir D, Hetta MH, Awadh AAA, Alqahtani OS, Hatano T, El-Shanawany MA.	Metabolites	10.3390/metabo13091013	2023
	In Situ Evaluation of Filter Media Modified by Biocidal Nanomaterials to Control Bioaerosols in Internal Environments.	de Freitas Rosa Remiro P, de Sousa CP, Alves HC, Bernardo A, Aguiar ML.	Water Air Soil Pollut	10.1007/s11270-021-05105-3	2021
	Synthesis and Characterization of a Bioartificial Polymeric System with Potential Antibacterial Activity: Chitosan-Polyvinyl Alcohol-Ampicillin.	Bernal-Ballen A, Lopez-Garcia J, Merchan-Merchan MA, Lehocky M.	Molecules	10.3390/molecules23123109	2018
Phylogeny	Reptile-associated Borrelia species in the goanna tick (Bothriocroton undatum) from Sydney, Australia.	Panetta JL, Sima R, Calvani NED, Hajdusek O, Chandra S, Panuccio J, Slapeta J.	Parasit Vectors	10.1186/s13071-017-2579-5	2017
	Efficacy of an anaerobic swab transport system to maintain aerobic and anaerobic microorganism viability after storage at -80 degrees C.	Musser JM, Gonzalez R.	J Vet Diagn Invest	10.1177/104063871102300115	2011
Enzymology	(S)-3-Hydroxybutyryl-CoA Dehydrogenase From the Autotrophic 3-Hydroxypropionate/4-Hydroxybutyrate Cycle in Nitrosopumilus maritimus.	Liu L, Schubert DM, Konneke M, Berg IA.	Front Microbiol	10.3389/fmicb.2021.712030	2021
Enzymology	Evaluation of a new most-probable-number (MPN) dilution plate method for the enumeration of Escherichia coli in water samples.	Kodaka H, Saito M, Matsuoka H.	Biocontrol Sci	10.4265/bio.14.123	2009
Pathogenicity	Antibacterial action mechanisms and mode of trypsin inhibitors: a systematic review.	de Souza Nascimento AM, de Oliveira Segundo VH, Felipe Camelo Aguiar AJ, Piuvezam G, Souza Passos T, Florentino da Silva Chaves Damasceno KSFDS, de Araujo Morais AH.	J Enzyme Inhib Med Chem	10.1080/14756366.2022.2039918	2022
	Isolation of Enteropathogenic Escherichia coli from lettuce samples in Tehran.	Mazaheri S, Salmanzadeh-Ahrabi S, Falsafi T, Aslani MM.	Gastroenterol Hepatol Bed Bench		2014
	Phytochemicals, mineral contents, antioxidants, and antimicrobial activities of propolis produced by Brunei stingless bees Geniotrigona thoracica, Heterotrigona itama, and Tetrigona binghami.	Abdullah NA, Zullkiflee N, Zaini SNZ, Taha H, Hashim F, Usman A.	Saudi J Biol Sci	10.1016/j.sjbs.2020.09.014	2020
	Exploring the Sustainable Exploitation of Bioactive Compounds in Pelargonium sp.: Beyond a Fragrant Plant.	Roman S, Voaides C, Babeanu N.	Plants (Basel)	10.3390/plants12244123	2023
	Efficiency of pulse pressure treatment for inactivation of Escherichia coli and Listeria innocua in whole milk	Buzrul S, Alpas H, Largeteau A, Demazeau G.	Eur Food Res Technol	10.1007/s00217-009-1033-0	2009
	Comparison of Riboflavin and Toluidine Blue O as Photosensitizers for Photoactivated Disinfection on Endodontic and Periodontal Pathogens In Vitro.	Nielsen HK, Garcia J, Vaeth M, Schlafer S.	PLoS One	10.1371/journal.pone.0140720	2015
	Amino Acid Sequences of Lactoferrin from Red Deer (Cervus elaphus) Milk and Antimicrobial Activity of Its Derived Peptides Lactoferricin and Lactoferrampin.	Wang Y, Morton JD, Bekhit AEA, Carne A, Mason SL.	Foods	10.3390/foods10061305	2021
Metabolism	Natural Product Potential of the Genus Nocardiopsis.	Ibrahim AH, Desoukey SY, Fouad MA, Kamel MS, Gulder TAM, Abdelmohsen UR.	Mar Drugs	10.3390/md16050147	2018
Pathogenicity	Activity of moxifloxacin, imipenem, and ertapenem against Escherichia coli, Enterobacter cloacae, Enterococcus faecalis, and Bacteroides fragilis in monocultures and mixed cultures in an in vitro pharmacokinetic/pharmacodynamic model simulating concentrations in the human pancreas.	Schubert S, Dalhoff A.	Antimicrob Agents Chemother	10.1128/aac.00872-12	2012
	Chemical and Antioxidant Charaterization of Native Corn Germplasm from Two Regions of Costa Rica: A Conservation Approach.	Syedd-Leon R, Orozco R, Alvarez V, Carvajal Y, Rodriguez G.	Int J Food Sci	10.1155/2020/2439541	2020
	In-vitro evaluation of antimicrobial and insect repellent potential of supercritical-carbon dioxide (SCF-CO₂) extracts of selected botanicals against stored product pests and foodborne pathogens.	Bhavya ML, Chandu AGS, Devi SS, Quirin KW, Pasha A, Vijayendra SVN.	J Food Sci Technol	10.1007/s13197-019-04141-6	2020
Transcriptome	De Novo Transcriptome Analysis and Detection of Antimicrobial Peptides of the American Cockroach Periplaneta americana (Linnaeus).	Kim IW, Lee JH, Subramaniyam S, Yun EY, Kim I, Park J, Hwang JS.	PLoS One	10.1371/journal.pone.0155304	2016
	Biocompatible and Antimicrobial Electrospun Membranes Based on Nanocomposites of Chitosan/Poly (Vinyl Alcohol)/Graphene Oxide.	Tamayo Marin JA, Londono SR, Delgado J, Navia Porras DP, Valencia Zapata ME, Mina Hernandez JH, Valencia CH, Grande Tovar CD.	Int J Mol Sci	10.3390/ijms20122987	2019
	Phenolic-Rich Plant Extracts With Antimicrobial Activity: An Alternative to Food Preservatives and Biocides?	Oulahal N, Degraeve P.	Front Microbiol	10.3389/fmicb.2021.753518	2021
	Detection of AmpC beta Lactamases in Gram-negative Bacteria.	Gupta G, Tak V, Mathur P.	J Lab Physicians	10.4103/0974-2727.129082	2014
	Evaluation of ginsenoside bioconversion of lactic acid bacteria isolated from kimchi.	Park B, Hwang H, Lee J, Sohn SO, Lee SH, Jung MY, Lim HI, Park HW, Lee JH.	J Ginseng Res	10.1016/j.jgr.2016.10.003	2017
Pathogenicity	Efficacy of ampicillin against methicillin-resistant Staphylococcus aureus restored through synergy with branched poly(ethylenimine).	Foxley MA, Friedline AW, Jensen JM, Nimmo SL, Scull EM, King JB, Strange S, Xiao MT, Smith BE, Thomas Iii KJ, Glatzhofer DT, Cichewicz RH, Rice CV.	J Antibiot (Tokyo)	10.1038/ja.2016.44	2016
	Physicochemical analyses, antioxidant, antibacterial, and toxicity of propolis particles produced by stingless bee Heterotrigona itama found in Brunei Darussalam.	Abdullah NA, Ja'afar F, Yasin HM, Taha H, Petalcorin MIR, Mamit MH, Kusrini E, Usman A.	Heliyon	10.1016/j.heliyon.2019.e02476	2019
	Pressure-Spun Fibrous Surgical Sutures for Localized Antibacterial Delivery: Development, Characterization, and In Vitro Evaluation.	Altun E, Bayram C, Gultekinoglu M, Matharu R, Delbusso A, Homer-Vanniasinkam S, Edirisinghe M.	ACS Appl Mater Interfaces	10.1021/acsami.3c07956	2023
	Salinity Stress Enhances the Antioxidant Capacity of Bacillus and Planococcus Species Isolated From Saline Lake Environment.	Hassan AHA, Alkhalifah DHM, Al Yousef SA, Beemster GTS, Mousa ASM, Hozzein WN, AbdElgawad H.	Front Microbiol	10.3389/fmicb.2020.561816	2020
Pathogenicity	Structural Features and Immunomodulatory Effects of Water-Extractable Polysaccharides from Macrolepiota procera (Scop.) Singer.	Georgiev YN, Vasicek O, Dzhambazov B, Batsalova TG, Denev PN, Dobreva LI, Danova ST, Simova SD, Wold CW, Ognyanov MH, Paulsen BS, Krastanov AI.	J Fungi (Basel)	10.3390/jof8080848	2022
	The Long-Term Effect of a Nine Amino-Acid Antimicrobial Peptide AS-hepc3_(48-56) Against Pseudomonas aeruginosa With No Detectable Resistance.	Zhu D, Chen F, Chen YC, Peng H, Wang KJ.	Front Cell Infect Microbiol	10.3389/fcimb.2021.752637	2021
	Design, Synthesis, and Antibacterial Screening of Some Novel Heteroaryl-Based Ciprofloxacin Derivatives as DNA Gyrase and Topoisomerase IV Inhibitors.	Al-Wahaibi LH, Amer AA, Marzouk AA, Gomaa HAM, Youssif BGM, Abdelhamid AA.	Pharmaceuticals (Basel)	10.3390/ph14050399	2021
	Natural Cyclic Peptides as an Attractive Modality for Therapeutics: A Mini Review.	Abdalla MA, McGaw LJ.	Molecules	10.3390/molecules23082080	2018
	Assessment of Tamarindus indica extracts for antibacterial activity.	Nwodo UU, Obiiyeke GE, Chigor VN, Okoh AI.	Int J Mol Sci	10.3390/ijms12106385	2011
	Bactericidal Antibacterial Mechanism of Plant Synthesized Silver, Gold and Bimetallic Nanoparticles.	Fanoro OT, Oluwafemi OS.	Pharmaceutics	10.3390/pharmaceutics12111044	2020
	The Usefulness of Microalgae Compounds for Preventing Biofilm Infections.	Lopez Y, Soto SM.	Antibiotics (Basel)	10.3390/antibiotics9010009	2019
	Effects of lactoferrin on neonatal pathogens and Bifidobacterium breve in human breast milk.	Woodman T, Strunk T, Patole S, Hartmann B, Simmer K, Currie A.	PLoS One	10.1371/journal.pone.0201819	2018
Pathogenicity	The Panda-Derived Lactobacillus plantarum G201683 Alleviates the Inflammatory Response in DSS-Induced Panda Microbiota-Associated Mice.	Zhou Y, Duan L, Zeng Y, Niu L, Pu Y, Jacobs JP, Chang C, Wang J, Khalique A, Pan K, Fang J, Jing B, Zeng D, Ni X.	Front Immunol	10.3389/fimmu.2021.747045	2021
	INVESTIGATION ON CHEMICAL COMPOSITION, ANTIMICROBIAL, ANTIOXIDANT, AND CYTOTOXIC PROPERTIES OF ESSENTIAL OIL FROM DRACOCEPHALUM KOTSCHYI BOISS.	Ashrafi B, Ramak P, Ezatpour B, Talei GR.	Afr J Tradit Complement Altern Med	10.21010/ajtcam.v14i3.23	2017
	Hydroxyl Radical Generation Through the Fenton-Like Reaction of Hematin- and Catechol-Functionalized Microgels.	Forooshani PK, Pinnaratip R, Polega E, Tyo AG, Pearson E, Liu B, Folayan TO, Pan L, Rajachar RM, Heldt CL, Lee BP.	Chem Mater	10.1021/acs.chemmater.0c01551	2020
Pathogenicity	Justification for the use of Ocimum gratissimum L in herbal medicine and its interaction with disc antibiotics.	Nweze EI, Eze EE.	BMC Complement Altern Med	10.1186/1472-6882-9-37	2009
	Shorter Antibacterial Peptide Having High Selectivity for E. coli Membranes and Low Potential for Inducing Resistance.	Barreto-Santamaria A, Rivera ZJ, Garcia JE, Curtidor H, Patarroyo ME, Patarroyo MA, Arevalo-Pinzon G.	Microorganisms	10.3390/microorganisms8060867	2020
	Screening of Bioactivities and Toxicity of Cnidoscolus quercifolius Pohl.	Paredes PF, Vasconcelos FR, Paim RT, Marques MM, De Morais SM, Lira SM, Braquehais ID, Vieira IG, Mendes FN, Guedes MI.	Evid Based Complement Alternat Med	10.1155/2016/7930563	2016
	Mechanism of Action against Food Spoilage Yeasts and Bioactivity of Tasmannia lanceolata, Backhousia citriodora and Syzygium anisatum Plant Solvent Extracts.	Alderees F, Mereddy R, Webber D, Nirmal N, Sultanbawa Y.	Foods	10.3390/foods7110179	2018
	Gastric Non-Helicobacter pylori Urease-Positive Staphylococcus epidermidis and Streptococcus salivarius Isolated from Humans Have Contrasting Effects on H. pylori-Associated Gastric Pathology and Host Immune Responses in a Murine Model of Gastric Cancer.	Shen Z, Dzink-Fox J, Feng Y, Muthupalani S, Mannion AJ, Sheh A, Whary MT, Holcombe HR, Piazuelo BM, Bravo LE, Josenhans C, Suerbaum S, Wilson KT, Peek RM, Wang TC, Fox JG.	mSphere	10.1128/msphere.00772-21	2022
	Prevalence of Cyclomodulin-Positive E. coli and Klebsiella spp. Strains in Mexican Patients with Colon Diseases and Antimicrobial Resistance.	Canizalez-Roman A, Reina-Reyes JE, Angulo-Zamudio UA, Geminiano-Martinez EE, Flores-Carrillo AF, Garcia-Matus RR, Valencia-Mijares NM, Leon-Sicairos N, Velazquez-Roman J, Martinez-Villa FA, Tapia-Pastrana G.	Pathogens	10.3390/pathogens11010014	2021
	Functionalized ZnO Nanoparticles with Gallic Acid for Antioxidant and Antibacterial Activity against Methicillin-Resistant S. aureus.	Lee J, Choi KH, Min J, Kim HJ, Jee JP, Park BJ.	Nanomaterials (Basel)	10.3390/nano7110365	2017
	Synthesis, characterization and evaluation of antibacterial activity of some thiazolo[3,2-b][1,2,4]triazole incorporating diphenylsulfone moieties.	Barbuceanu SF, Almajan GL, Saramet I, Draghici C, Tarcomnicu AI, Bancescu G.	Eur J Med Chem	10.1016/j.ejmech.2009.06.021	2009
	Macrotermycins A-D, Glycosylated Macrolactams from a Termite-Associated Amycolatopsis sp. M39.	Beemelmanns C, Ramadhar TR, Kim KH, Klassen JL, Cao S, Wyche TP, Hou Y, Poulsen M, Bugni TS, Currie CR, Clardy J.	Org Lett	10.1021/acs.orglett.6b03831	2017
Pathogenicity	Evaluation of antioxidant, antibacterial and wound healing activities of Vitex pinnata.	Shafie NA, Suhaili NA, Taha H, Ahmad N.	F1000Res	10.12688/f1000research.21310.2	2020
Enzymology	Duplex Quantitative PCR Assay for Detection of Haemophilus influenzae That Distinguishes Fucose- and Protein D-Negative Strains.	de Gier C, Pickering JL, Richmond PC, Thornton RB, Kirkham LA.	J Clin Microbiol	10.1128/jcm.00982-16	2016
Pathogenicity	Copper(II) and uranyl(II) complexes with acylthiosemicarbazide: synthesis, characterization, antibacterial activity and effects on the growth of promyelocytic leukemia cells HL-60.	Angelusiu MV, Almajan GL, Rosu T, Negoiu M, Almajan ER, Roy J.	Eur J Med Chem	10.1016/j.ejmech.2009.03.016	2009
	Evaluation of Selected Bacteria and Yeast for Probiotic Potential in Poultry Production.	Dixon B, Kilonzo-Nthenge A, Nzomo M, Bhogoju S, Nahashon S.	Microorganisms	10.3390/microorganisms10040676	2022
	Mechanisms of pressure-mediated cell death and injury in Escherichia coli: from fundamentals to food applications.	Ganzle M, Liu Y.	Front Microbiol	10.3389/fmicb.2015.00599	2015
	Metal complexes of Tridentate Schiff base: Synthesis, Characterization, Biological Activity and Molecular Docking Studies with COVID-19 Protein Receptor.	Mohamed GG, Omar MM, Ahmed YM.	Z Anorg Allg Chem	10.1002/zaac.202100245	2021
	Antibacterial Activity against Four Fish Pathogenic Bacteria of Twelve Microalgae Species Isolated from Lagoons in Western Greece.	Androutsopoulou C, Makridis P.	Microorganisms	10.3390/microorganisms11061396	2023
	The Role of Metal Oxide Nanoparticles, Escherichia coli, and Lactobacillus rhamnosus on Small Intestinal Enzyme Activity.	Garcia-Rodriguez A, Moreno-Olivas F, Marcos R, Tako E, Marques CNH, Mahler GJ.	Environ Sci Nano	10.1039/d0en01001d	2020
	Absolute Stereochemistry Determination of Bioactive Marine-Derived Cyclopeptides by Liquid Chromatography Methods: An Update Review (2018-2022).	Fernandes C, Ribeiro R, Pinto M, Kijjoa A.	Molecules	10.3390/molecules28020615	2023
Enzymology	Recent trends in the applications of sonochemical reactors as an advanced oxidation process for the remediation of microbial hazards associated with water and wastewater: A critical review.	Dehghani MH, Karri RR, Koduru JR, Manickam S, Tyagi I, Mubarak NM, Suhas.	Ultrason Sonochem	10.1016/j.ultsonch.2023.106302	2023
	Dual Cross-Linked Chitosan/PVA Hydrogels Containing Silver Nanoparticles with Antimicrobial Properties.	Suflet DM, Popescu I, Pelin IM, Ichim DL, Daraba OM, Constantin M, Fundueanu G.	Pharmaceutics	10.3390/pharmaceutics13091461	2021
	Alterations in the airborne bacterial community during Asian dust events occurring between February and March 2015 in South Korea.	Cha S, Lee D, Jang JH, Lim S, Yang D, Seo T.	Sci Rep	10.1038/srep37271	2016
Enzymology	Development of a Flow Cytometry-Based Method for Rapid Detection of Escherichia coli and Shigella Spp. Using an Oligonucleotide Probe.	Xue Y, Wilkes JG, Moskal TJ, Williams AJ, Cooper WM, Nayak R, Rafii F, Buzatu DA.	PLoS One	10.1371/journal.pone.0150038	2016
	Antibacterial and Antioxidant Properties of the Methanolic Extract of the Stem Bark of Pteleopsis hylodendron (Combretaceae).	Mokale Kognou AL, Ngono Ngane RA, Kuiate JR, Koanga Mogtomo ML, Tchinda Tiabou A, Mouokeu RS, Biyiti L, Amvam Zollo PH.	Chemother Res Pract	10.1155/2011/218750	2011
	Acetylcholinesterase-Inhibition and Antibacterial Activity of Mondia whitei Adventitious Roots and Ex vitro-Grown Somatic Embryogenic-Biomass.	Baskaran P, Kumari A, Ncube B, Van Staden J.	Front Pharmacol	10.3389/fphar.2016.00335	2016
	Gradient acoustic focusing of sub-micron particles for separation of bacteria from blood lysate.	Van Assche D, Reithuber E, Qiu W, Laurell T, Henriques-Normark B, Mellroth P, Ohlsson P, Augustsson P.	Sci Rep	10.1038/s41598-020-60338-2	2020
	Shiga toxin-producing Escherichia coli isolated from lettuce samples in tehran, iran.	Mazaheri S, Salmanzadeh Ahrabi S, Aslani MM.	Jundishapur J Microbiol	10.5812/jjm.12346	2014
	Antibacterial activity of propolins from Taiwanese green propolis.	Chen YW, Ye SR, Ting C, Yu YH.	J Food Drug Anal	10.1016/j.jfda.2017.10.002	2018
	Synthesis, antimicrobial and cytotoxicity evaluation of new cholesterol congeners.	Aly MR, Saad HA, Abdel-Hafez SH.	Beilstein J Org Chem	10.3762/bjoc.11.208	2015
	Benzalkonium Chlorides: Uses, Regulatory Status, and Microbial Resistance.	Merchel Piovesan Pereira B, Tagkopoulos I.	Appl Environ Microbiol	10.1128/aem.00377-19	2019
Pathogenicity	Evaluation of antibacterial activity, phenol and flavonoid contents of Thespesia populnea flower extracts.	Saravanakumar A, Venkateshwaran K, Vanitha J, Ganesh M, Vasudevan M, Sivakumar T.	Pak J Pharm Sci		2009
	Expression of enterotoxin-coding genes in methicillin-resistant Staphylococcus aureus strains isolated from Mexican haemodialysis patients.	Paniagua-Contreras GL, Monroy-Perez E, Vaca-Paniagua F, Rodriguez-Moctezuma JR, Vaca S.	Ann Clin Microbiol Antimicrob	10.1186/s12941-014-0055-z	2014
Biotechnology	Growth inhibition of various Enterobacteriaceae species by the yeast Hansenula anomala during storage of moist cereal grain.	Olstorpe M, Schnurer J, Passoth V.	Appl Environ Microbiol	10.1128/aem.06024-11	2012
	Research Progress on Antibacterial Activities and Mechanisms of Natural Alkaloids: A Review.	Yan Y, Li X, Zhang C, Lv L, Gao B, Li M.	Antibiotics (Basel)	10.3390/antibiotics10030318	2021
	Evaluation of heterotrophic plate and chromogenic agar colony counting in water quality laboratories.	Hallas G, Monis P.	MethodsX	10.1016/j.mex.2015.10.003	2015
	Naringenin and Its Derivatives-Health-Promoting Phytobiotic against Resistant Bacteria and Fungi in Humans.	Duda-Madej A, Stecko J, Sobieraj J, Szymanska N, Kozlowska J.	Antibiotics (Basel)	10.3390/antibiotics11111628	2022
Pathogenicity	Cross-resistance to antibiotics of Escherichia coli adapted to benzalkonium chloride or exposed to stress-inducers.	Langsrud S, Sundheim G, Holck AL.	J Appl Microbiol	10.1046/j.1365-2672.2003.02140.x	2004
	Rise of the killer plants: investigating the antimicrobial activity of Australian plants to enhance biofilter-mediated pathogen removal.	Galbraith P, Henry R, McCarthy DT.	J Biol Eng	10.1186/s13036-019-0175-2	2019
Metabolism	Lipid Peroxidation Drives Gasdermin D-Mediated Pyroptosis in Lethal Polymicrobial Sepsis.	Kang R, Zeng L, Zhu S, Xie Y, Liu J, Wen Q, Cao L, Xie M, Ran Q, Kroemer G, Wang H, Billiar TR, Jiang J, Tang D.	Cell Host Microbe	10.1016/j.chom.2018.05.009	2018
Pathogenicity	Bioassay-guided discovery of antibacterial agents: in vitro screening of Peperomia vulcanica, Peperomia fernandopoioana and Scleria striatinux.	Mbah JA, Ngemenya MN, Abawah AL, Babiaka SB, Nubed LN, Nyongbela KD, Lemuh ND, Efange SM.	Ann Clin Microbiol Antimicrob	10.1186/1476-0711-11-10	2012
Enzymology	Isolation, characterization, kinetics, and enzymatic and nonenzymatic microbicidal activities of a novel c-type lysozyme from plasma of Schistocerca gregaria (Orthoptera: Acrididae).	Elmogy M, Bassal TT, Yousef HA, Dorrah MA, Mohamed AA, Duvic B.	J Insect Sci	10.1093/jisesa/iev038	2015
	Talaropeptides A-D: Structure and Biosynthesis of Extensively N-methylated Linear Peptides From an Australian Marine Tunicate-Derived Talaromyces sp.	Dewapriya P, Khalil ZG, Prasad P, Salim AA, Cruz-Morales P, Marcellin E, Capon RJ.	Front Chem	10.3389/fchem.2018.00394	2018
Metabolism	Skin-Derived C-Terminal Filaggrin-2 Fragments Are Pseudomonas aeruginosa-Directed Antimicrobials Targeting Bacterial Replication.	Hansmann B, Schroder JM, Gerstel U.	PLoS Pathog	10.1371/journal.ppat.1005159	2015
	Synthesis of Some New Folic Acid-Based Heterocycles of Anticipated Biological Activity.	Abu Ali OA, Saad HA, Al Malki BMA.	Molecules	10.3390/molecules26020368	2021
	Evaluation of Antimicrobial and Anti-Biofilm Formation Activities of Novel Poly(vinyl alcohol) Hydrogels Reinforced with Crosslinked Chitosan and Silver Nano-Particles.	Alfuraydi RT, Alminderej FM, Mohamed NA.	Polymers (Basel)	10.3390/polym14081619	2022
Metabolism	Identification and Target-Modification of SL-BBI: A Novel Bowman-Birk Type Trypsin Inhibitor from Sylvirana latouchii.	Chen X, Chen D, Huang L, Chen X, Zhou M, Xi X, Ma C, Chen T, Wang L.	Biomolecules	10.3390/biom10091254	2020
Pathogenicity	Applications of Fruit Polyphenols and Their Functionalized Nanoparticles Against Foodborne Bacteria: A Mini Review.	Kumar H, Bhardwaj K, Cruz-Martins N, Nepovimova E, Oleksak P, Dhanjal DS, Bhardwaj S, Singh R, Chopra C, Verma R, Chauhan PP, Kumar D, Kuca K.	Molecules	10.3390/molecules26113447	2021
Biotechnology	Emergence and stability of high-pressure resistance in different food-borne pathogens.	Vanlint D, Rutten N, Michiels CW, Aertsen A.	Appl Environ Microbiol	10.1128/aem.00030-12	2012
	Biomimetic recyclable microgels for on-demand generation of hydrogen peroxide and antipathogenic application.	Meng H, Forooshani PK, Joshi PU, Osborne J, Mi X, Meingast C, Pinnaratip R, Kelley J, Narkar A, He W, Frost MC, Heldt CL, Lee BP.	Acta Biomater	10.1016/j.actbio.2018.10.037	2019
Metabolism	Characterized non-transient microbiota from stinkbug (Nezara viridula) midgut deactivates soybean chemical defenses.	Medina V, Sardoy PM, Soria M, Vay CA, Gutkind GO, Zavala JA.	PLoS One	10.1371/journal.pone.0200161	2018
Pathogenicity	Chemical composition, antimicrobial properties and toxicity evaluation of the essential oil of Cupressus lusitanica Mill. leaves from Cameroon.	Teke GN, Elisee KN, Roger KJ.	BMC Complement Altern Med	10.1186/1472-6882-13-130	2013
Enzymology	Saccharomonopyrones A-C, New alpha-Pyrones from a Marine Sediment-Derived Bacterium Saccharomonospora sp. CNQ-490.	Yim CY, Le TC, Lee TG, Yang I, Choi H, Lee J, Kang KY, Lee JS, Lim KM, Yee ST, Kang H, Nam SJ, Fenical W.	Mar Drugs	10.3390/md15080239	2017
	Antioxidative, Antiproliferative and Antimicrobial Activities of Phenolic Compounds from Three Myrcia Species.	Dos Santos C, Galaverna RS, Angolini CFF, Nunes VVA, de Almeida LFR, Ruiz ALTG, de Carvalho JE, Duarte RMT, Duarte MCT, Eberlin MN.	Molecules	10.3390/molecules23050986	2018
	Chicory Extracts and Sesquiterpene Lactones Show Potent Activity against Bacterial and Fungal Pathogens.	Hakkinen ST, Sokovic M, Nohynek L, Ciric A, Ivanov M, Stojkovic D, Tsitko I, Matos M, Baixinho JP, Ivasiv V, Fernandez N, Nunes Dos Santos C, Oksman-Caldentey KM.	Pharmaceuticals (Basel)	10.3390/ph14090941	2021
Phylogeny	Characterization of enterotoxigenic Escherichia coli strains isolated from Nicaraguan children in hospital, primary care and community settings.	Vilchez S, Becker-Dreps S, Amaya E, Perez C, Paniagua M, Reyes D, Espinoza F, Weintraub A.	J Med Microbiol	10.1099/jmm.0.066779-0	2014
	Cladodionen, a Cytotoxic Hybrid Polyketide from the Marine-Derived Cladosporium sp. OUCMDZ-1635.	Zhu G, Kong F, Wang Y, Fu P, Zhu W.	Mar Drugs	10.3390/md16020071	2018
	Antioxidant, antibacterial, and cytoprotective activity of agathi leaf protein.	Zarena AS, Gopal S, Vineeth R.	J Anal Methods Chem	10.1155/2014/989543	2014
Genetics	Genome Shuffling of Mangrove Endophytic Aspergillus luchuensis MERV10 for Improving the Cholesterol-Lowering Agent Lovastatin under Solid State Fermentation.	El-Gendy MM, Al-Zahrani HA, El-Bondkly AM.	Mycobiology	10.5941/myco.2016.44.3.171	2016
	Identification and antimicrobial activity detection of lactic Acid bacteria isolated from corn stover silage.	Li D, Ni K, Pang H, Wang Y, Cai Y, Jin Q.	Asian-Australas J Anim Sci	10.5713/ajas.14.0439	2015
Enzymology	Cytotoxic Meroterpenoids with Rare Skeletons from Psidium guajava Cultivated in Temperate Zone.	Qin XJ, Yan H, Ni W, Yu MY, Khan A, Liu H, Zhang HX, He L, Hao XJ, Di YT, Liu HY.	Sci Rep	10.1038/srep32748	2016
	Charged Metallopolymer-Grafted Silica Nanoparticles for Antimicrobial Applications.	Pageni P, Yang P, Chen YP, Huang Y, Bam M, Zhu T, Nagarkatti M, Benicewicz BC, Decho AW, Tang C.	Biomacromolecules	10.1021/acs.biomac.7b01510	2018
	A study of the properties of chlorine dioxide gas as a fumigant.	Shirasaki Y, Matsuura A, Uekusa M, Ito Y, Hayashi T.	Exp Anim	10.1538/expanim.15-0092	2016
Genetics	Complete Genome Sequencing and Comparative Genomics of Three Potential Probiotic Strains, Lacticaseibacillus casei FBL6, Lacticaseibacillus chiayiensis FBL7, and Lacticaseibacillus zeae FBL8.	Kim E, Yang SM, Kim D, Kim HY.	Front Microbiol	10.3389/fmicb.2021.794315	2021
Biotechnology	Studies to select appropriate nonpathogenic surrogate Escherichia coli strains for potential use in place of Escherichia coli O157:H7 and salmonella in pilot plant studiest.	Eblen DR, Annous BA, Sapers GM.	J Food Prot	10.4315/0362-028x-68.2.282	2005
	Phytochemical and antimicrobial effects of Chrozophora senegalensis.	Usman H, Musa YM, Ahmadu AA, Tijjani MA.	Afr J Tradit Complement Altern Med	10.4314/ajtcam.v4i4.31242	2007
	Anti-Inflammatory and Antimicrobial Volatile Oils: Fennel and Cumin Inhibit Neutrophilic Inflammation via Regulating Calcium and MAPKs.	Korinek M, Handoussa H, Tsai YH, Chen YY, Chen MH, Chiou ZW, Fang Y, Chang FR, Yen CH, Hsieh CF, Chen BH, El-Shazly M, Hwang TL.	Front Pharmacol	10.3389/fphar.2021.674095	2021
	Functional characterization of pressurized liquid extracts of Spirulina platensis	Santoyo Susana, Herrero Miguel, Senorans FJavier, Cifuentes Alejandro, Ibanez Elena, Jaime Laura.	Eur Food Res Technol	10.1007/s00217-006-0291-3	2006
	Chemical Composition, Antimicrobial and Antitumor Potentiality of Essential Oil of Ferula tingitana L. Apiaceae Grow in Libya.	Elghwaji W, El-Sayed AM, El-Deeb KS, ElSayed AM.	Pharmacogn Mag	10.4103/pm.pm_323_15	2017
	Poultry hatcheries as potential reservoirs for antimicrobial-resistant Escherichia coli: A risk to public health and food safety.	Osman KM, Kappell AD, Elhadidy M, ElMougy F, El-Ghany WAA, Orabi A, Mubarak AS, Dawoud TM, Hemeg HA, Moussa IMI, Hessain AM, Yousef HMY.	Sci Rep	10.1038/s41598-018-23962-7	2018
	Genome In Silico and In Vitro Analysis of the Probiotic Properties of a Bacterial Endophyte, Bacillus Paranthracis Strain MHSD3.	Diale MO, Kayitesi E, Serepa-Dlamini MH.	Front Genet	10.3389/fgene.2021.672149	2021
	Bacteria Remediate the Effects of Food Additives on Intestinal Function in an in vitro Model of the Gastrointestinal Tract.	Malik M, Subedi S, Marques CNH, Mahler GJ.	Front Nutr	10.3389/fnut.2020.00131	2020
	Supercritical fluid extraction of antioxidant and antimicrobial compounds from Laurus nobilis L. Chemical and functional characterization	Santoyo S, Lloria R, Jaime L, Ibanez E, Senorans FJ, Reglero G.	Eur Food Res Technol	10.1007/s00217-005-0027-9	2006
	Relationship between total phenolic contents and biological properties of propolis from 20 different regions in South Korea.	Wang X, Sankarapandian K, Cheng Y, Woo SO, Kwon HW, Perumalsamy H, Ahn YJ.	BMC Complement Altern Med	10.1186/s12906-016-1043-y	2016
	Development of a DNA Aptamer for Screening Neisseria meningitidis Serogroup B by Cell SELEX	Mirzakhani K, Mousavi Gargari SL, Rasooli I, Rasoulinejad S.	Iran Biomed J	10.22034/ibj.22.3.193	2017
Enzymology	Molecular method for detection of total coliforms in drinking water samples.	Maheux AF, Boudreau DK, Bisson MA, Dion-Dupont V, Bouchard S, Nkuranga M, Bergeron MG, Rodriguez MJ.	Appl Environ Microbiol	10.1128/aem.00546-14	2014
	Stilbenoids: A Natural Arsenal against Bacterial Pathogens.	Mattio LM, Catinella G, Dallavalle S, Pinto A.	Antibiotics (Basel)	10.3390/antibiotics9060336	2020
	TiO₂ Nanoparticles and Commensal Bacteria Alter Mucus Layer Thickness and Composition in a Gastrointestinal Tract Model.	Limage R, Tako E, Kolba N, Guo Z, Garcia-Rodriguez A, Marques CNH, Mahler GJ.	Small	10.1002/smll.202000601	2020
Pathogenicity	Comparative in vitro activities of the novel antibacterial finafloxacin against selected Gram-positive and Gram-negative bacteria tested in Mueller-Hinton broth and synthetic urine.	Dalhoff A, Stubbings W, Schubert S.	Antimicrob Agents Chemother	10.1128/aac.00886-10	2011
Enzymology	Comparison of Methods to Identify Pathogens and Associated Virulence Functional Genes in Biosolids from Two Different Wastewater Treatment Facilities in Canada.	Yergeau E, Masson L, Elias M, Xiang S, Madey E, Huang H, Brooks B, Beaudette LA.	PLoS One	10.1371/journal.pone.0153554	2016
	Chemoenzymatic synthesis of daptomycin analogs active against daptomycin-resistant strains.	Scull EM, Bandari C, Johnson BP, Gardner ED, Tonelli M, You J, Cichewicz RH, Singh S.	Appl Microbiol Biotechnol	10.1007/s00253-020-10790-x	2020
Metabolism	mRNA expression profiles for Escherichia coli ingested by normal and phagocyte oxidase-deficient human neutrophils.	Staudinger BJ, Oberdoerster MA, Lewis PJ, Rosen H.	J Clin Invest	10.1172/jci15268	2002
Pathogenicity	Transcriptional, Epigenetic, and Functional Reprogramming of Monocytes From Non-Human Primates Following Chronic Alcohol Drinking.	Lewis SA, Sureshchandra S, Doratt B, Jimenez VA, Stull C, Grant KA, Messaoudi I.	Front Immunol	10.3389/fimmu.2021.724015	2021
	TRIM34 modulates influenza virus-activated programmed cell death by targeting Z-DNA-binding protein 1 for K63-linked polyubiquitination.	Wang X, Xiong J, Zhou D, Zhang S, Wang L, Tian Q, Li C, Liu J, Wu Y, Li J, Wang J.	J Biol Chem	10.1016/j.jbc.2022.101611	2022
Pathogenicity	Silica-gentamicin nanohybrids: combating antibiotic resistance, bacterial biofilms, and in vivo toxicity.	Mosselhy DA, He W, Hynonen U, Meng Y, Mohammadi P, Palva A, Feng Q, Hannula SP, Nordstrom K, Linder MB.	Int J Nanomedicine	10.2147/ijn.s182611	2018
	Impact of benzalkonium chloride, benzethonium chloride and chloroxylenol on bacterial antimicrobial resistance.	Maillard JY.	J Appl Microbiol	10.1111/jam.15739	2022
Phylogeny	Phylogenetic affiliation and determination of bioactive compounds of bacterial population associated with organs of mud crab, Scylla olivacea.	Zote J, Passari AK, Zothanpuia, Siddaiah CN, Kumar NS, Abd Allah EF, Hashem A, Alqarawi AA, Malik JA, Singh BP.	Saudi J Biol Sci	10.1016/j.sjbs.2018.08.025	2018
	Encapsulated Limonene: A Pleasant Lemon-Like Aroma with Promising Application in the Agri-Food Industry. A Review.	Ibanez MD, Sanchez-Ballester NM, Blazquez MA.	Molecules	10.3390/molecules25112598	2020
Pathogenicity	Chitosan Beads Incorporated with Essential Oil of Thymus capitatus: Stability Studies on Red Tilapia Fillets.	Valencia Junca MA, Valencia C, Florez Lopez E, Delgado-Ospina J, Zapata PA, Solano M, Grande Tovar CD.	Biomolecules	10.3390/biom9090458	2019
	Synthesis of Oxadiazolyl, Pyrazolyl and Thiazolyl Derivatives of Thiophene-2-Carboxamide as Antimicrobial and Anti-HCV Agents.	Rizk OH, Shaaban OG, Abdel Wahab AE.	Open Med Chem J	10.2174/1874104501711010038	2017
	Decoding the epitranscriptional landscape from native RNA sequences.	Jenjaroenpun P, Wongsurawat T, Wadley TD, Wassenaar TM, Liu J, Dai Q, Wanchai V, Akel NS, Jamshidi-Parsian A, Franco AT, Boysen G, Jennings ML, Ussery DW, He C, Nookaew I.	Nucleic Acids Res	10.1093/nar/gkaa620	2021
Phylogeny	Chemical Diversity and Bioactivities of Monoterpene Indole Alkaloids (MIAs) from Six Apocynaceae Genera.	Mohammed AE, Abdul-Hameed ZH, Alotaibi MO, Bawakid NO, Sobahi TR, Abdel-Lateff A, Alarif WM.	Molecules	10.3390/molecules26020488	2021
Metabolism	TMEM173 Drives Lethal Coagulation in Sepsis.	Zhang H, Zeng L, Xie M, Liu J, Zhou B, Wu R, Cao L, Kroemer G, Wang H, Billiar TR, Zeh HJ, Kang R, Jiang J, Yu Y, Tang D.	Cell Host Microbe	10.1016/j.chom.2020.02.004	2020
	Interactions between a pathogenic Blastocystis subtype and gut microbiota: in vitro and in vivo studies.	Yason JA, Liang YR, Png CW, Zhang Y, Tan KSW.	Microbiome	10.1186/s40168-019-0644-3	2019
Pathogenicity	Mouse beta-defensin-14, an antimicrobial ortholog of human beta-defensin-3.	Hinrichsen K, Podschun R, Schubert S, Schroder JM, Harder J, Proksch E.	Antimicrob Agents Chemother	10.1128/aac.01308-07	2008
Enzymology	Development and accuracy of quantitative real-time polymerase chain reaction assays for detection and quantification of enterotoxigenic Escherichia coli (ETEC) heat labile and heat stable toxin genes in travelers' diarrhea samples.	Youmans BP, Ajami NJ, Jiang ZD, Petrosino JF, DuPont HL, Highlander SK.	Am J Trop Med Hyg	10.4269/ajtmh.13-0383	2014
	Virulence Determinants and Antimicrobial Profiles of Pasteurella multocida Isolated from Cattle and Humans in Egypt.	Elsayed MSAE, Eldsouky SM, Roshdy T, Said L, Thabet N, Allam T, Mohammed ABA, Nasr GM, Basiouny MSM, Akl BA, Nader MM, Hasan AS, Salah A.	Antibiotics (Basel)	10.3390/antibiotics10050480	2021
	Antibacterial Properties of Mussel-Inspired Polydopamine Coatings Prepared by a Simple Two-Step Shaking-Assisted Method.	Kord Forooshani P, Polega E, Thomson K, Bhuiyan MSA, Pinnaratip R, Trought M, Kendrick C, Gao Y, Perrine KA, Pan L, Lee BP.	Front Chem	10.3389/fchem.2019.00631	2019
	Antimicrobial, Anthelmintic Activities and Characterisation of Functional Phenolic Acids of Achyranthes aspera Linn.: A Medicinal Plant Used for the Treatment of Wounds and Ringworm in East Africa.	Ndhlala AR, Ghebrehiwot HM, Ncube B, Aremu AO, Gruz J, Subrtova M, Dolezal K, du Plooy CP, Abdelgadir HA, Van Staden J.	Front Pharmacol	10.3389/fphar.2015.00274	2015
Enzymology	Enumeration of bacterial cell numbers and detection of significant bacteriuria by use of a new flow cytometry-based device.	Okada H, Shirakawa T, Gotoh A, Kamiyama Y, Muto S, Ide H, Hamaguchi Y, Horie S.	J Clin Microbiol	10.1128/jcm.02543-05	2006
Pathogenicity	Novel Prosopis juliflora leaf ethanolic extract as natural antimicrobial agent against food spoiling microorganisms.	Saleh I, Abu-Dieyeh MH.	Sci Rep	10.1038/s41598-021-86509-3	2021
	Marine Pyrrole Alkaloids.	Seipp K, Geske L, Opatz T.	Mar Drugs	10.3390/md19090514	2021
Metabolism	Bioactive Bromotyrosine Derivatives from the Pacific Marine Sponge Suberea clavata (Pulitzer-Finali, 1982).	Moriou C, Lacroix D, Petek S, El-Demerdash A, Trepos R, Leu TM, Florean C, Diederich M, Hellio C, Debitus C, Al-Mourabit A.	Mar Drugs	10.3390/md19030143	2021
	The pulsed light inactivation of veterinary relevant microbial biofilms and the use of a RTPCR assay to detect parasite species within biofilm structures.	Garvey M, Coughlan G, Murphy N, Rowan N.	Open Vet J	10.4314/ovj.v6i1.3	2016
Stress	A handheld real time thermal cycler for bacterial pathogen detection.	Higgins JA, Nasarabadi S, Karns JS, Shelton DR, Cooper M, Gbakima A, Koopman RP.	Biosens Bioelectron	10.1016/s0956-5663(02)00252-x	2003
	Furfural from Pine Needle Extract Inhibits the Growth of a Plant Pathogenic Fungus, Alternaria mali.	Jung KH, Yoo SK, Moon SK, Lee US.	Mycobiology	10.4489/myco.2007.35.1.039	2007
Metabolism	Adaptation response of Pseudomonas fragi on refrigerated solid matrix to a moderate electric field.	Chen W, Hu H, Zhang C, Huang F, Zhang D, Zhang H.	BMC Microbiol	10.1186/s12866-017-0945-2	2017
Enzymology	Comparison of PCR-based methods for the simultaneous detection of Neisseria meningitidis, Haemophilus influenzae, and Streptococcus pneumoniae in clinical samples.	de Filippis I, de Andrade CF, Caldeira N, de Azevedo AC, de Almeida AE.	Braz J Infect Dis	10.1016/j.bjid.2016.04.005	2016
Metabolism	Development of an mlrA gene-directed TaqMan PCR assay for quantitative assessment of microcystin-degrading bacteria within water treatment plant sand filter biofilms.	Hoefel D, Adriansen CM, Bouyssou MA, Saint CP, Newcombe G, Ho L.	Appl Environ Microbiol	10.1128/aem.00036-09	2009
	Effects of hot water and lactic acid treatment of beef trimmings prior to grinding on microbial, instrumental color and sensory properties of ground beef during display.	Stivarius MR, Pohlman FW, McElyea KS, Waldroup AL.	Meat Sci	10.1016/s0309-1740(01)00127-9	2002
	Studies on the cytocompatibility, mechanical and antimicrobial properties of 3D printed poly(methyl methacrylate) beads.	Mills DK, Jammalamadaka U, Tappa K, Weisman J.	Bioact Mater	10.1016/j.bioactmat.2018.01.006	2018
	Inactivation and injury of pressure-resistant strains of Escherichia coli O157 and Listeria monocytogenes in fruit juices.	Jordan SL, Pascual C, Bracey E, Mackey BM.	J Appl Microbiol	10.1046/j.1365-2672.2001.01402.x	2001
Enzymology	Evaluation of Colilert-18 for detection of coliforms and Eschericha coli in subtropical freshwater.	Chao KK, Chao CC, Chao WL.	Appl Environ Microbiol	10.1128/aem.70.2.1242-1244.2004	2004
	Antimicrobial and selected in vitro enzyme inhibitory effects of leaf extracts, flavonols and indole alkaloids isolated from Croton menyharthii.	Aderogba MA, Ndhlala AR, Rengasamy KR, Van Staden J.	Molecules	10.3390/molecules181012633	2013
	Restriction Profiling of 23S Microheterogenic Ribosomal Repeats for Detection and Characterizing of E. coli and Their Clonal, Pathogenic, and Phylogroups.	Jayasree Rajagopalan Nair P, Singh S.	J Pathog	10.1155/2015/562136	2015
	Identification of RNase 8 as a novel human antimicrobial protein.	Rudolph B, Podschun R, Sahly H, Schubert S, Schroder JM, Harder J.	Antimicrob Agents Chemother	10.1128/aac.00246-06	2006
Pathogenicity	THCz: Small molecules with antimicrobial activity that block cell wall lipid intermediates.	Reithuber E, Wixe T, Ludwig KC, Muller A, Uvell H, Grein F, Lindgren AEG, Muschiol S, Nannapaneni P, Eriksson A, Schneider T, Normark S, Henriques-Normark B, Almqvist F, Mellroth P.	Proc Natl Acad Sci U S A	10.1073/pnas.2108244118	2021
	Laser-induced inactivation of Plasmodium falciparum.	LeBlanc D, Story R, Gross E.	Malar J	10.1186/1475-2875-11-267	2012
Biotechnology	Formulations and processing of yogurt affect the microbial quality of carbonated yogurt.	Karagul-Yuceer Y, Wilson JC, White CH.	J Dairy Sci	10.3168/jds.s0022-0302(01)74506-7	2001
Pathogenicity	Maternal obesity blunts antimicrobial responses in fetal monocytes.	Sureshchandra S, Doratt BM, Mendza N, Varlamov O, Rincon M, Marshall NE, Messaoudi I.	Elife	10.7554/elife.81320	2023
Enzymology	New method for laboratory detection of AmpC beta-lactamases in Escherichia coli and Klebsiella pneumoniae.	Nasim K, Elsayed S, Pitout JD, Conly J, Church DL, Gregson DB.	J Clin Microbiol	10.1128/jcm.42.10.4799-4802.2004	2004
Phylogeny	Detection and characterization of diarrheagenic Escherichia coli from young children in Hanoi, Vietnam.	Nguyen TV, Le Van P, Le Huy C, Gia KN, Weintraub A.	J Clin Microbiol	10.1128/jcm.43.2.755-760.2005	2005
	Caspase-11 auto-proteolysis is crucial for noncanonical inflammasome activation.	Lee BL, Stowe IB, Gupta A, Kornfeld OS, Roose-Girma M, Anderson K, Warming S, Zhang J, Lee WP, Kayagaki N.	J Exp Med	10.1084/jem.20180589	2018
Enzymology	Rapid detection and simultaneous genotyping of Cronobacter spp. (formerly Enterobacter sakazakii) in powdered infant formula using real-time PCR and high resolution melting (HRM) analysis.	Cai XQ, Yu HQ, Ruan ZX, Yang LL, Bai JS, Qiu DY, Jian ZH, Xiao YQ, Yang JY, Le TH, Zhu XQ.	PLoS One	10.1371/journal.pone.0067082	2013
	Evaluation of extracts of the root of Landolphia owerrience for antibacterial activity.	Okeke MI, Iroegbu CU, Eze EN, Okoli AS, Esimone CO.	J Ethnopharmacol	10.1016/s0378-8741(01)00307-5	2001
Pathogenicity	Antimicrobial activities of hexane extract and decussatin from stembark extract of Ficus congensis.	Alaribe CS, Shode F, Coker HA, Ayoola G, Sunday A, Singh N, Iwuanyanwu S.	Int J Mol Sci	10.3390/ijms12042750	2011
Metabolism	Cacolides: Sesterterpene Butenolides from a Southern Australian Marine Sponge, Cacospongia sp.	Khushi S, Nahar L, Salim AA, Capon RJ.	Mar Drugs	10.3390/md16110456	2018
	Artificial oxidative stress-tolerant Corynebacterium glutamicum.	Lee JY, Lee HJ, Seo J, Kim ES, Lee HS, Kim P.	AMB Express	10.1186/s13568-014-0015-1	2014
Enzymology	Rapid concentration and molecular enrichment approach for sensitive detection of Escherichia coli and Shigella species in potable water samples.	Maheux AF, Bissonnette L, Boissinot M, Bernier JL, Huppe V, Picard FJ, Berube E, Bergeron MG.	Appl Environ Microbiol	10.1128/aem.02337-10	2011
	Indole alkaloids from marine sources as potential leads against infectious diseases.	Franca PH, Barbosa DP, da Silva DL, Ribeiro EA, Santana AE, Santos BV, Barbosa-Filho JM, Quintans JS, Quintans JS, Barreto RS, Quintans-Junior LJ, de Araujo-Junior JX.	Biomed Res Int	10.1155/2014/375423	2014
	Molecular mechanisms of interaction of rabbit CAP18 with outer membranes of gram-negative bacteria.	Gutsmann T, Larrick JW, Seydel U, Wiese A.	Biochemistry	10.1021/bi990643v	1999
Phylogeny	Multiplex PCR for detection of the Vibrio genus and five pathogenic Vibrio species with primer sets designed using comparative genomics.	Kim HJ, Ryu JO, Lee SY, Kim ES, Kim HY.	BMC Microbiol	10.1186/s12866-015-0577-3	2015
	Trace Metal Availability Affects Greenhouse Gas Emissions and Microbial Functional Group Abundance in Freshwater Wetland Sediments.	Giannopoulos G, Hartop KR, Brown BL, Song B, Elsgaard L, Franklin RB.	Front Microbiol	10.3389/fmicb.2020.560861	2020
	Trio Act of Boronolectin with Antibiotic-Metal Complexed Macromolecules toward Broad-Spectrum Antimicrobial Efficacy.	Yang P, Bam M, Pageni P, Zhu T, Chen YP, Nagarkatti M, Decho AW, Tang C.	ACS Infect Dis	10.1021/acsinfecdis.7b00132	2017
	Culture-Dependent Bioprospecting of Bacterial Isolates From the Canadian High Arctic Displaying Antibacterial Activity.	Marcolefas E, Leung T, Okshevsky M, McKay G, Hignett E, Hamel J, Aguirre G, Blenner-Hassett O, Boyle B, Levesque RC, Nguyen D, Gruenheid S, Whyte L.	Front Microbiol	10.3389/fmicb.2019.01836	2019
	Combined In Vitro Studies and in Silico Target Fishing for the Evaluation of the Biological Activities of Diphylleia cymosa and Podophyllum hexandrum.	Rocha MP, Campana PRV, Scoaris DO, Almeida VL, Lopes JCD, Shaw JMH, Silva CG.	Molecules	10.3390/molecules23123303	2018
Metabolism	Reciprocal cross-species induction of outer membrane vesicle biogenesis via secreted factors.	Horspool AM, Schertzer JW.	Sci Rep	10.1038/s41598-018-28042-4	2018
	Recovery of Escherichia coli from potentially lethal radiation damage: characterization of a recovery phenomenon	Lucht L, Blank G, Borsa J.	Journal of food safety.	10.1111/j.1745-4565.1997.tb00193.x	1997
	Antimicrobial and Safety Properties of Lactobacilli Isolated from two Cameroonian Traditional Fermented Foods.	Kaktcham PM, Zambou NF, Tchouanguep FM, El-Soda M, Choudhary MI.	Sci Pharm	10.3797/scipharm.1107-12	2012
	Screening of Probiotic Activities of Lactobacilli Strains Isolated from Traditional Tibetan Qula, A Raw Yak Milk Cheese.	Zhang B, Wang Y, Tan Z, Li Z, Jiao Z, Huang Q.	Asian-Australas J Anim Sci	10.5713/ajas.15.0849	2016
Phylogeny	A 16S rRNA Gene and Draft Genome Database for the Murine Oral Bacterial Community.	Joseph S, Aduse-Opoku J, Hashim A, Hanski E, Streich R, Knowles SCL, Pedersen AB, Wade WG, Curtis MA.	mSystems	10.1128/msystems.01222-20	2021
	Effect of drying on the bioactive compounds, antioxidant, antibacterial and antityrosinase activities of pomegranate peel.	Mphahlele RR, Fawole OA, Makunga NP, Opara UL.	BMC Complement Altern Med	10.1186/s12906-016-1132-y	2016
	Improved Method for the Detection and Quantification of Naegleria fowleri in Water and Sediment Using Immunomagnetic Separation and Real-Time PCR.	Mull BJ, Narayanan J, Hill VR.	J Parasitol Res	10.1155/2013/608367	2013
Pathogenicity	Effects of fractionation and combinatorial evaluation of Tamarindus indica fractions for antibacterial activity.	Nwodo UU, Iroegbu CU, Ngene AA, Chigor VN, Okoh AI.	Molecules	10.3390/molecules16064818	2011
	Escherichia coli O157:H7 growth in laboratory media as affected by phenolic antioxidants	Ogunrinola OA, Fung DYC, Jeon IK.	J Food Sci	10.1111/j.1365-2621.1996.tb10923.x	1996
	Characterization of the Three New Kayviruses and Their Lytic Activity Against Multidrug-Resistant Staphylococcus aureus.	Lubowska N, Grygorcewicz B, Kosznik-Kwasnicka K, Zauszkiewicz-Pawlak A, Wegrzyn A, Dolegowska B, Piechowicz L.	Microorganisms	10.3390/microorganisms7100471	2019
Enzymology	Comparison of bacterial quantities in left and right colon biopsies and faeces.	Lyra A, Forssten S, Rolny P, Wettergren Y, Lahtinen SJ, Salli K, Cedgard L, Odin E, Gustavsson B, Ouwehand AC.	World J Gastroenterol	10.3748/wjg.v18.i32.4404	2012
Enzymology	Inhibitor-based methods for detection of plasmid-mediated AmpC beta-lactamases in Klebsiella spp., Escherichia coli, and Proteus mirabilis.	Coudron PE.	J Clin Microbiol	10.1128/jcm.43.8.4163-4167.2005	2005
	A Review on Non-thermal Atmospheric Plasma for Food Preservation: Mode of Action, Determinants of Effectiveness, and Applications.	Lopez M, Calvo T, Prieto M, Mugica-Vidal R, Muro-Fraguas I, Alba-Elias F, Alvarez-Ordonez A.	Front Microbiol	10.3389/fmicb.2019.00622	2019
Enzymology	Diversity and function of the Antarctic krill microorganisms from Euphausia superba.	Cui X, Zhu G, Liu H, Jiang G, Wang Y, Zhu W.	Sci Rep	10.1038/srep36496	2016
Enzymology	Development of an improved selective and differential medium for isolation of Salmonella spp.	Park SH, Ryu S, Kang DH.	J Clin Microbiol	10.1128/jcm.01228-12	2012
Enzymology	Fate of Escherichia coli O157:H7 on fresh-cut apple tissue and its potential for transmission by fruit flies.	Janisiewicz WJ, Conway WS, Brown MW, Sapers GM, Fratamico P, Buchanan RL.	Appl Environ Microbiol	10.1128/aem.65.1.1-5.1999	1999
	Alepidea amatymbica Eckl. & Zeyh.: A Review of Its Traditional Uses, Phytochemistry, Pharmacology, and Toxicology.	Wintola OA, Afolayan AJ.	Evid Based Complement Alternat Med	10.1155/2014/284517	2014
Pathogenicity	Intracellular activity of azithromycin against bacterial enteric pathogens.	Rakita RM, Jacques-Palaz K, Murray BE.	Antimicrob Agents Chemother	10.1128/aac.38.9.1915	1994
Metabolism	Effect of inactivation of the global oxidative stress regulator oxyR on the colonization ability of Escherichia coli O1:K1:H7 in a mouse model of ascending urinary tract infection.	Johnson JR, Clabots C, Rosen H.	Infect Immun	10.1128/iai.74.1.461-468.2006	2006
Metabolism	Environmental factors affecting indole production in Escherichia coli.	Han TH, Lee JH, Cho MH, Wood TK, Lee J.	Res Microbiol	10.1016/j.resmic.2010.11.005	2011
	Microbial inactivation by high pressure processing: principle, mechanism and factors responsible.	Sehrawat R, Kaur BP, Nema PK, Tewari S, Kumar L.	Food Sci Biotechnol	10.1007/s10068-020-00831-6	2021
Pathogenicity	Inactivation of Escherichia coli and Listeria innocua in milk by combined treatment with high hydrostatic pressure and the lactoperoxidase system.	Garcia-Graells C, Valckx C, Michiels CW.	Appl Environ Microbiol	10.1128/aem.66.10.4173-4179.2000	2000
	The novel antimicrobial peptide PXL150 in the local treatment of skin and soft tissue infections.	Myhrman E, Hakansson J, Lindgren K, Bjorn C, Sjostrand V, Mahlapuu M.	Appl Microbiol Biotechnol	10.1007/s00253-012-4439-8	2013
	Identification of thermo tolerant lactic acid bacteria isolated from silage prepared in the hot and humid climate of Southwestern Japan.	Doi K, Nishizaki Y, Kimura H, Kitahara M, Fujino Y, Ohmomo S, Ohshima T, Ogata S.	Springerplus	10.1186/2193-1801-2-485	2013
Pathogenicity	N-terminally modified linear and branched spermine backbone dipeptidomimetics against planktonic and sessile methicillin-resistant Staphylococcus aureus.	Dewangan RP, Joshi S, Kumari S, Gautam H, Yar MS, Pasha S.	Antimicrob Agents Chemother	10.1128/aac.03391-14	2014
Pathogenicity	Novel Miniature Membrane Active Lipopeptidomimetics against Planktonic and Biofilm Embedded Methicillin-Resistant Staphylococcus aureus.	Joshi S, Joshi S, Mumtaz S, Singh J, Pasha S, Mukhopadhyay K.	Sci Rep	10.1038/s41598-017-17234-z	2018
	Development of a Phage Cocktail to Control Proteus mirabilis Catheter-associated Urinary Tract Infections.	Melo LD, Veiga P, Cerca N, Kropinski AM, Almeida C, Azeredo J, Sillankorva S.	Front Microbiol	10.3389/fmicb.2016.01024	2016
	Rapid antimicrobial susceptibility testing by sensitive detection of precursor rRNA using a novel electrochemical biosensing platform.	Halford C, Gonzalez R, Campuzano S, Hu B, Babbitt JT, Liu J, Wang J, Churchill BM, Haake DA.	Antimicrob Agents Chemother	10.1128/aac.00615-12	2013
	Innate immune responses to paraquat exposure in a Drosophila model of Parkinson's disease.	Maitra U, Scaglione MN, Chtarbanova S, O'Donnell JM.	Sci Rep	10.1038/s41598-019-48977-6	2019
Pathogenicity	Effects of Melaleuca alternifolia (tea tree) essential oil and the major monoterpene component terpinen-4-ol on the development of single- and multistep antibiotic resistance and antimicrobial susceptibility.	Hammer KA, Carson CF, Riley TV.	Antimicrob Agents Chemother	10.1128/aac.05741-11	2012
	Identification, Bioactivity, and Productivity of Actinomycins from the Marine-Derived Streptomyces heliomycini.	Wang D, Wang C, Gui P, Liu H, Khalaf SMH, Elsayed EA, Wadaan MAM, Hozzein WN, Zhu W.	Front Microbiol	10.3389/fmicb.2017.01147	2017
	Antimicrobial nitric oxide releasing surfaces based on S-nitroso-N-acetylpenicillamine impregnated polymers combined with submicron-textured surface topography.	Wo Y, Xu LC, Li Z, Matzger AJ, Meyerhoff ME, Siedlecki CA.	Biomater Sci	10.1039/c7bm00108h	2017
	Antibacterial, antioxidant and tyrosinase-inhibition activities of pomegranate fruit peel methanolic extract.	Fawole OA, Fawole OA, Makunga NP, Opara UL.	BMC Complement Altern Med	10.1186/1472-6882-12-200	2012
Pathogenicity	Inhibition of bacterial growth and intramniotic infection in a guinea pig model of chorioamnionitis using PAMAM dendrimers.	Wang B, Navath RS, Menjoge AR, Balakrishnan B, Bellair R, Dai H, Romero R, Kannan S, Kannan RM.	Int J Pharm	10.1016/j.ijpharm.2010.05.030	2010
	Biocontrol of Tomato Bacterial Wilt by Foliar Spray Application of a Novel Strain of Endophytic Bacillus sp.	Fu HZ, Marian M, Enomoto T, Hieno A, Ina H, Suga H, Shimizu M.	Microbes Environ	10.1264/jsme2.me20078	2020
	Potential of essential oils for poultry and pigs.	Zhai H, Liu H, Wang S, Wu J, Kluenter AM.	Anim Nutr	10.1016/j.aninu.2018.01.005	2018
	Genome-wide responses of a pathogenic bacterium to its host.	Relman DA.	J Clin Invest	10.1172/jci16944	2002
Metabolism	Comparative study of HOCl-inflicted damage to bacterial DNA ex vivo and within cells.	Suquet C, Warren JJ, Seth N, Hurst JK.	Arch Biochem Biophys	10.1016/j.abb.2009.10.006	2010
	Bimetallic Nanoparticles for Antimicrobial Applications.	Arora N, Thangavelu K, Karanikolos GN.	Front Chem	10.3389/fchem.2020.00412	2020
	Use of molecular analysis in pathophysiological investigation of late-onset neonatal Escherichia coli meningitis.	Bingen E, Bedu A, Brahimi N, Aujard Y.	J Clin Microbiol	10.1128/jcm.33.11.3074-3076.1995	1995
	Implementation of a novel in vitro model of infection of reconstituted human epithelium for expression of virulence genes in methicillin-resistant Staphylococcus aureus strains isolated from catheter-related infections in Mexico.	Paniagua-Contreras GL, Monroy-Perez E, Vaca-Paniagua F, Rodriguez-Moctezuma JR, Negrete-Abascal E, Vaca S.	Ann Clin Microbiol Antimicrob	10.1186/1476-0711-13-6	2014
Pathogenicity	Shornephine A: structure, chemical stability, and P-glycoprotein inhibitory properties of a rare diketomorpholine from an Australian marine-derived Aspergillus sp.	Khalil ZG, Huang XC, Raju R, Piggott AM, Capon RJ.	J Org Chem	10.1021/jo501501z	2014
Metabolism	Human beta-defensin 2 and beta-defensin 3 chimeric peptides reveal the structural basis of the pathogen specificity of their parent molecules.	Jung S, Mysliwy J, Spudy B, Lorenzen I, Reiss K, Gelhaus C, Podschun R, Leippe M, Grotzinger J.	Antimicrob Agents Chemother	10.1128/aac.00872-10	2011
	Temperature range for growth of Escherichia coli serotype O157:H7 and selected coliforms in E. coli medium.	Raghubeer EV, Matches JR.	J Clin Microbiol	10.1128/jcm.28.4.803-805.1990	1990
	Molecular epidemiology unravels the complexity of neonatal Escherichia coli acquisition in twins.	Bingen EH, Denamur E, Picard B, Goullet P, Lambert-Zechovsky NY, Brahimi N, Mercier JC, Beaufils F, Elion J.	J Clin Microbiol	10.1128/jcm.30.7.1896-1898.1992	1992
	Sources and contamination routes of microbial pathogens to fresh produce during field cultivation: A review.	Alegbeleye OO, Singleton I, Sant'Ana AS.	Food Microbiol	10.1016/j.fm.2018.01.003	2018
Enzymology	Occurrence and detection of AmpC beta-lactamases among Escherichia coli, Klebsiella pneumoniae, and Proteus mirabilis isolates at a veterans medical center.	Coudron PE, Moland ES, Thomson KS.	J Clin Microbiol	10.1128/jcm.38.5.1791-1796.2000	2000
	Chemerin is an antimicrobial agent in human epidermis.	Banas M, Zabieglo K, Kasetty G, Kapinska-Mrowiecka M, Borowczyk J, Drukala J, Murzyn K, Zabel BA, Butcher EC, Schroeder JM, Schmidtchen A, Cichy J.	PLoS One	10.1371/journal.pone.0058709	2013
Pathogenicity	Antimicrobial and antioxidant properties of methanol extract, fractions and compounds from the stem bark of Entada abyssinica Stend ex A. Satabie.	Teke GN, Lunga PK, Wabo HK, Kuiate JR, Vilarem G, Giacinti G, Kikuchi H, Oshima Y.	BMC Complement Altern Med	10.1186/1472-6882-11-57	2011
Metabolism	Efficient ethanol production from glucose, lactose, and xylose by recombinant Escherichia coli.	Alterthum F, Ingram LO.	Appl Environ Microbiol	10.1128/aem.55.8.1943-1948.1989	1989
Pathogenicity	gyrA mutations associated with fluoroquinolone resistance in eight species of Enterobacteriaceae.	Weigel LM, Steward CD, Tenover FC.	Antimicrob Agents Chemother	10.1128/aac.42.10.2661	1998
Pathogenicity	Antibacterial and dermal toxicological profiles of ethyl acetate extract from Crassocephalum bauchiense (Hutch.) Milne-Redh (Asteraceae).	Mouokeu RS, Ngono RA, Lunga PK, Koanga MM, Tiabou AT, Njateng GS, Tamokou JD, Kuiate JR.	BMC Complement Altern Med	10.1186/1472-6882-11-43	2011
	Recovery of a marker strain of Escherichia coli from ozonated water by membrane filtration.	Finch GR, Stiles ME, Smith DW.	Appl Environ Microbiol	10.1128/aem.53.12.2894-2896.1987	1987
	Anti-infectious and anti-inflammatory effects of peptide fragments sequentially derived from the antimicrobial peptide centrocin 1 isolated from the green sea urchin, Strongylocentrotus droebachiensis.	Bjorn C, Hakansson J, Myhrman E, Sjostrand V, Haug T, Lindgren K, Blencke HM, Stensvag K, Mahlapuu M.	AMB Express	10.1186/2191-0855-2-67	2012
Enzymology	Two or more enteropathogens are associated with diarrhoea in Mexican children.	Paniagua GL, Monroy E, Garcia-Gonzalez O, Alonso J, Negrete E, Vaca S.	Ann Clin Microbiol Antimicrob	10.1186/1476-0711-6-17	2007
Metabolism	Redundant contribution of myeloperoxidase-dependent systems to neutrophil-mediated killing of Escherichia coli.	Rosen H, Michel BR.	Infect Immun	10.1128/iai.65.10.4173-4178.1997	1997
	T(H)17 cells promote microbial killing and innate immune sensing of DNA via interleukin 26.	Meller S, Di Domizio J, Voo KS, Friedrich HC, Chamilos G, Ganguly D, Conrad C, Gregorio J, Le Roy D, Roger T, Ladbury JE, Homey B, Watowich S, Modlin RL, Kontoyiannis DP, Liu YJ, Arold ST, Gilliet M.	Nat Immunol	10.1038/ni.3211	2015
Pathogenicity	Reduced bacterial adhesion to fibrinogen-coated substrates via nitric oxide release.	Charville GW, Hetrick EM, Geer CB, Schoenfisch MH.	Biomaterials	10.1016/j.biomaterials.2008.07.005	2008
	An acute osteomyelitis model in traumatized rat tibiae involving sand as a foreign body, thermal injury, and bimicrobial contamination.	McPherson JC, Runner RR, Shapiro B, Walsh DS, Stephens-DeValle J, Buxton TB.	Comp Med		2008
Enzymology	Rapid detection of Clostridium difficile in feces by real-time PCR.	Belanger SD, Boissinot M, Clairoux N, Picard FJ, Bergeron MG.	J Clin Microbiol	10.1128/jcm.41.2.730-734.2003	2003
	Antimicrobial Lipids from Plants and Marine Organisms: An Overview of the Current State-of-the-Art and Future Prospects.	Alves E, Dias M, Lopes D, Almeida A, Domingues MDR, Rey F.	Antibiotics (Basel)	10.3390/antibiotics9080441	2020
Metabolism	Escherichia coli variants for gas and indole production at elevated incubation temperatures.	Bueschkens DH, Stiles ME.	Appl Environ Microbiol	10.1128/aem.48.3.601-605.1984	1984
	NLRP3 activation and mitosis are mutually exclusive events coordinated by NEK7, a new inflammasome component.	Shi H, Wang Y, Li X, Zhan X, Tang M, Fina M, Su L, Pratt D, Bu CH, Hildebrand S, Lyon S, Scott L, Quan J, Sun Q, Russell J, Arnett S, Jurek P, Chen D, Kravchenko VV, Mathison JC, Moresco EM, Monson NL, Ulevitch RJ, Beutler B.	Nat Immunol	10.1038/ni.3333	2016
Metabolism	A long-term cultivation of an anaerobic methane-oxidizing microbial community from deep-sea methane-seep sediment using a continuous-flow bioreactor.	Aoki M, Ehara M, Saito Y, Yoshioka H, Miyazaki M, Saito Y, Miyashita A, Kawakami S, Yamaguchi T, Ohashi A, Nunoura T, Takai K, Imachi H.	PLoS One	10.1371/journal.pone.0105356	2014
Metabolism	Methanogenic food web in the gut contents of methane-emitting earthworm Eudrilus eugeniae from Brazil.	Schulz K, Hunger S, Brown GG, Tsai SM, Cerri CC, Conrad R, Drake HL.	ISME J	10.1038/ismej.2014.262	2015
Pathogenicity	Differential effects of myeloperoxidase-derived oxidants on Escherichia coli DNA replication.	Rosen H, Michel BR, vanDevanter DR, Hughes JP.	Infect Immun	10.1128/iai.66.6.2655-2659.1998	1998
	Semi-nested polymerase chain reaction for detection of toxigenic Vibrio cholerae from environmental water samples.	Goel AK, Bhadauria S, Kumar P, Kamboj DV, Singh L.	Indian J Microbiol	10.1007/s12088-007-0041-7	2007
	Bioactive constituents from Harpephyllum caffrum Bernh. and Rhus coriaria L.	Shabana MM, El Sayed AM, Yousif MF, El Sayed AM, Sleem AA.	Pharmacogn Mag	10.4103/0973-1296.90410	2011
	What really happens in the neutrophil phagosome?	Hurst JK.	Free Radic Biol Med	10.1016/j.freeradbiomed.2012.05.008	2012
Enzymology	Reappraising the structures and distribution of metabolites from black aspergilli containing uncommon 2-benzyl-4H-pyran-4-one and 2-benzylpyridin-4(1H)-one systems.	Henrikson JC, Ellis TK, King JB, Cichewicz RH.	J Nat Prod	10.1021/np200454z	2011
Enzymology	Quantification of bacterial groups within human fecal flora by oligonucleotide probe hybridization.	Sghir A, Gramet G, Suau A, Rochet V, Pochart P, Dore J.	Appl Environ Microbiol	10.1128/aem.66.5.2263-2266.2000	2000
	Survival of Acinetobacter baumannii on dry surfaces.	Wendt C, Dietze B, Dietz E, Ruden H.	J Clin Microbiol	10.1128/jcm.35.6.1394-1397.1997	1997
Enzymology	Evaluation of the new VITEK 2 card for identification of clinically relevant gram-negative rods.	Funke G, Funke-Kissling P.	J Clin Microbiol	10.1128/jcm.42.9.4067-4071.2004	2004
	Combined TLR2 and TLR4 ligation in the context of bacterial or helminth extracts in human monocyte derived dendritic cells: molecular correlates for Th1/Th2 polarization.	van Riet E, Everts B, Retra K, Phylipsen M, van Hellemond JJ, Tielens AG, van der Kleij D, Hartgers FC, Yazdanbakhsh M.	BMC Immunol	10.1186/1471-2172-10-9	2009
Metabolism	Antibiotic activity of an isocyanide metabolite of Trichoderma hamatum against rumen bacteria.	Liss SN, Brewer D, Taylor A, Jones GA.	Can J Microbiol	10.1139/m85-144	1985
	Environmental monitoring of waterborne Campylobacter: evaluation of the Australian standard and a hybrid extraction-free MPN-PCR method.	Henry R, Schang C, Chandrasena GI, Deletic A, Edmunds M, Jovanovic D, Kolotelo P, Schmidt J, Williamson R, McCarthy D.	Front Microbiol	10.3389/fmicb.2015.00074	2015
	Identification of a clone of Escherichia coli O103:H2 as a potential agent of hemolytic-uremic syndrome in France.	Mariani-Kurkdjian P, Denamur E, Milon A, Picard B, Cave H, Lambert-Zechovsky N, Loirat C, Goullet P, Sansonetti PJ, Elion J.	J Clin Microbiol	10.1128/jcm.31.2.296-301.1993	1993
	Commercial Essential Oils as Potential Antimicrobials to Treat Skin Diseases.	Orchard A, van Vuuren S.	Evid Based Complement Alternat Med	10.1155/2017/4517971	2017
Pathogenicity	Rapid detection, by PCR and reverse hybridization, of mutations in the Helicobacter pylori 23S rRNA gene, associated with macrolide resistance.	van Doorn LJ, Debets-Ossenkopp YJ, Marais A, Sanna R, Megraud F, Kusters JG, Quint WG.	Antimicrob Agents Chemother	10.1128/aac.43.7.1779	1999
Enzymology	Detection of Francisella tularensis in biological specimens using a capture enzyme-linked immunosorbent assay, an immunochromatographic handheld assay, and a PCR.	Grunow R, Splettstoesser W, McDonald S, Otterbein C, O'Brien T, Morgan C, Aldrich J, Hofer E, Finke EJ, Meyer H.	Clin Diagn Lab Immunol	10.1128/cdli.7.1.86-90.2000	2000
	Clonal analysis reveals high rate of structural mutations in fimbrial adhesins of extraintestinal pathogenic Escherichia coli.	Weissman SJ, Chattopadhyay S, Aprikian P, Obata-Yasuoka M, Yarova-Yarovaya Y, Stapleton A, Ba-Thein W, Dykhuizen D, Johnson JR, Sokurenko EV.	Mol Microbiol	10.1111/j.1365-2958.2005.04985.x	2006
	Enhancement of solar water pasteurization with reflectors.	Safapour N, Metcalf RH.	Appl Environ Microbiol	10.1128/aem.65.2.859-861.1999	1999
Metabolism	Loss of DNA-membrane interactions and cessation of DNA synthesis in myeloperoxidase-treated Escherichia coli.	Rosen H, Orman J, Rakita RM, Michel BR, VanDevanter DR.	Proc Natl Acad Sci U S A	10.1073/pnas.87.24.10048	1990
Enzymology	Detection of coliform bacteria in water by polymerase chain reaction and gene probes.	Bej AK, Steffan RJ, DiCesare J, Haff L, Atlas RM.	Appl Environ Microbiol	10.1128/aem.56.2.307-314.1990	1990
	Characterization of fecal microbiota across seven Chinese ethnic groups by quantitative polymerase chain reaction.	Kwok LY, Zhang J, Guo Z, Gesudu Q, Zheng Y, Qiao J, Huo D, Zhang H.	PLoS One	10.1371/journal.pone.0093631	2014
	Diversity and bioprospecting of fungal communities associated with endemic and cold-adapted macroalgae in Antarctica.	Godinho VM, Furbino LE, Santiago IF, Pellizzari FM, Yokoya NS, Pupo D, Alves TM, Junior PA, Romanha AJ, Zani CL, Cantrell CL, Rosa CA, Rosa LH.	ISME J	10.1038/ismej.2013.77	2013
	Establishing a Role for Bacterial Cellulose in Environmental Interactions: Lessons Learned from Diverse Biofilm-Producing Proteobacteria.	Augimeri RV, Varley AJ, Strap JL.	Front Microbiol	10.3389/fmicb.2015.01282	2015
Metabolism	phnE and glpT genes enhance utilization of organophosphates in Escherichia coli K-12.	Elashvili I, Defrank JJ, Culotta VC.	Appl Environ Microbiol	10.1128/aem.64.7.2601-2608.1998	1998
	Effect of anaerobiosis on the surface ultrastructure and surface proteins of Actinobacillus actinomycetemcomitans (Haemophilus actinomycetemcomitans).	Scannapieco FA, Millar SJ, Reynolds HS, Zambon JJ, Levine MJ.	Infect Immun	10.1128/iai.55.9.2320-2323.1987	1987
	Widespread microbial invasion of the chorioamniotic membranes is a consequence and not a cause of intra-amniotic infection.	Kim MJ, Romero R, Gervasi MT, Kim JS, Yoo W, Lee DC, Mittal P, Erez O, Kusanovic JP, Hassan SS, Kim CJ.	Lab Invest	10.1038/labinvest.2009.49	2009
Metabolism	Competing formate- and carbon dioxide-utilizing prokaryotes in an anoxic methane-emitting fen soil.	Hunger S, Schmidt O, Hilgarth M, Horn MA, Kolb S, Conrad R, Drake HL.	Appl Environ Microbiol	10.1128/aem.00282-11	2011
Metabolism	Some biochemical effects of 4-deoxy-4-fluoro-D-glucose on Escherichia coli.	Taylor NF, Louie LY.	Can J Biochem	10.1139/o77-135	1977
Cultivation	Evaluation of test media for routine monitoring of Escherichia coli in nonpotable waters.	Gaudet ID, Florence LZ, Coleman RN.	Appl Environ Microbiol	10.1128/aem.62.11.4032-4035.1996	1996
Pathogenicity	The effect of pH and potassium phosphate buffer on the toxicity of cadmium for bacteria.	Korkeala H, Pekkanen TJ.	Acta Vet Scand	10.1186/bf03547645	1978
	Identification and characterization of IS2404 and IS2606: two distinct repeated sequences for detection of Mycobacterium ulcerans by PCR.	Stinear T, Ross BC, Davies JK, Marino L, Robins-Browne RM, Oppedisano F, Sievers A, Johnson PD.	J Clin Microbiol	10.1128/jcm.37.4.1018-1023.1999	1999
Enzymology	Detection of hepatitis A virus by the nucleic acid sequence-based amplification technique and comparison with reverse transcription-PCR.	Jean J, Blais B, Darveau A, Fliss I.	Appl Environ Microbiol	10.1128/aem.67.12.5593-5600.2001	2001
Metabolism	Conservation of DNA sequences for plasmid-mediated citrate utilization within the enterobacteria.	Hirato T, Ishiguro N, Shinagawa M, Sato G.	J Bacteriol	10.1128/jb.165.1.324-327.1986	1986
Metabolism	Reassessment of the microbicidal activity of reactive oxygen species and hypochlorous acid with reference to the phagocytic vacuole of the neutrophil granulocyte.	Reeves EP, Nagl M, Godovac-Zimmermann J, Segal AW.	J Med Microbiol	10.1099/jmm.0.05181-0	2003
Enzymology	Species-specific oligonucleotide probes for five Bifidobacterium species detected in human intestinal microflora.	Yamamoto T, Morotomi M, Tanaka R.	Appl Environ Microbiol	10.1128/aem.58.12.4076-4079.1992	1992
Enzymology	Identification and quantitation of mucosal and faecal desulfovibrios using real time polymerase chain reaction.	Fite A, Macfarlane GT, Cummings JH, Hopkins MJ, Kong SC, Furrie E, Macfarlane S.	Gut	10.1136/gut.2003.031245	2004
Enzymology	Chemical epigenetics alters the secondary metabolite composition of guttate excreted by an atlantic-forest-soil-derived Penicillium citreonigrum.	Wang X, Sena Filho JG, Hoover AR, King JB, Ellis TK, Powell DR, Cichewicz RH.	J Nat Prod	10.1021/np100142h	2010
Metabolism	Phosphatidylethanolamine of Helicobacter pylori functions as a steroid-binding lipid in the assimilation of free cholesterol and 3beta-hydroxl steroids into the bacterial cell membrane.	Shimomura H, Hosoda K, Hayashi S, Yokota K, Hirai Y.	J Bacteriol	10.1128/jb.00105-12	2012
Enzymology	Comparison and evaluation of real-time PCR, real-time nucleic acid sequence-based amplification, conventional PCR, and serology for diagnosis of Mycoplasma pneumoniae.	Templeton KE, Scheltinga SA, Graffelman AW, Van Schie JM, Crielaard JW, Sillekens P, Van Den Broek PJ, Goossens H, Beersma MF, Claas EC.	J Clin Microbiol	10.1128/jcm.41.9.4366-4371.2003	2003
Metabolism	Inactivation of Escherichia coli penicillin-binding proteins by human neutrophils.	Rakita RM, Michel BR, Rosen H.	Infect Immun	10.1128/iai.62.1.162-165.1994	1994
Enzymology	Current Status and Future Prospects of Marine Natural Products (MNPs) as Antimicrobials.	Choudhary A, Naughton LM, Montanchez I, Dobson ADW, Rai DK.	Mar Drugs	10.3390/md15090272	2017
Enzymology	Isolation of citrate-positive variants of Escherichia coli from domestic pigeons, pigs, cattle, and horses.	Ishiguro N, Oka C, Sato G.	Appl Environ Microbiol	10.1128/aem.36.2.217-222.1978	1978
	Development of a rapid method for simultaneous recovery of diverse microbes in drinking water by ultrafiltration with sodium polyphosphate and surfactants.	Hill VR, Polaczyk AL, Hahn D, Narayanan J, Cromeans TL, Roberts JM, Amburgey JE.	Appl Environ Microbiol	10.1128/aem.71.11.6878-6884.2005	2005
Pathogenicity	The antifungal protein from Aspergillus giganteus causes membrane permeabilization.	Theis T, Wedde M, Meyer V, Stahl U.	Antimicrob Agents Chemother	10.1128/aac.47.2.588-593.2003	2003
Metabolism	Composition and metabolic activities of bacterial biofilms colonizing food residues in the human gut.	Macfarlane S, Macfarlane GT.	Appl Environ Microbiol	10.1128/aem.00754-06	2006
Enzymology	Evaluation of real-time PCR for detection of and discrimination between Bordetella pertussis, Bordetella parapertussis, and Bordetella holmesii for clinical diagnosis.	Templeton KE, Scheltinga SA, van der Zee A, Diederen BM, van Kruijssen A, Goossens H, Kuijper E, Claas EC.	J Clin Microbiol	10.1128/jcm.41.9.4121-4126.2003	2003
	Mucosa-associated bacterial diversity in relation to human terminal ileum and colonic biopsy samples.	Ahmed S, Macfarlane GT, Fite A, McBain AJ, Gilbert P, Macfarlane S.	Appl Environ Microbiol	10.1128/aem.01143-07	2007
Phylogeny	Characterization of bacterial communities in feces from healthy elderly volunteers and hospitalized elderly patients by using real-time PCR and effects of antibiotic treatment on the fecal microbiota.	Bartosch S, Fite A, Macfarlane GT, McMurdo ME.	Appl Environ Microbiol	10.1128/aem.70.6.3575-3581.2004	2004
Biotechnology	Medicinal properties and conservation of Pelargonium sidoides DC.	Moyo M, Van Staden J.	J Ethnopharmacol	10.1016/j.jep.2014.01.009	2014
	Vegetable-Associated Pediococcus parvulus Produces Pediocin PA-1.	Bennik M, Smid EJ, Gorris L.	Appl Environ Microbiol	10.1128/aem.63.5.2074-2076.1997	1997
	Therapeutic Potential of alpha- and beta-Pinene: A Miracle Gift of Nature.	Salehi B, Upadhyay S, Erdogan Orhan I, Kumar Jugran A, L D Jayaweera S, A Dias D, Sharopov F, Taheri Y, Martins N, Baghalpour N, Cho WC, Sharifi-Rad J.	Biomolecules	10.3390/biom9110738	2019
Biotechnology	Quantitative immunocapture PCR assay for detection of Campylobacter jejuni in foods.	Waller DF, Ogata SA.	Appl Environ Microbiol	10.1128/aem.66.9.4115-4118.2000	2000
Metabolism	Depletion of pre-16S rRNA in starved Escherichia coli cells.	Cangelosi GA, Brabant WH.	J Bacteriol	10.1128/jb.179.14.4457-4463.1997	1997
Metabolism	TaqMan PCR for detection of Vibrio cholerae O1, O139, non-O1, and non-O139 in pure cultures, raw oysters, and synthetic seawater.	Lyon WJ.	Appl Environ Microbiol	10.1128/aem.67.10.4685-4693.2001	2001
	Selective-differential medium for isolation and differentiation of pectinatus from other brewery microorganisms.	Lee SY, Moore SE, Mabee MS.	Appl Environ Microbiol	10.1128/aem.41.2.386-387.1981	1981
Biotechnology	Rapid and sensitive detection of Campylobacter spp. in chicken products by using the polymerase chain reaction.	Giesendorf BA, Quint WG, Henkens MH, Stegeman H, Huf FA, Niesters HG.	Appl Environ Microbiol	10.1128/aem.58.12.3804-3808.1992	1992
Metabolism	Penicillin-binding protein inactivation by human neutrophil myeloperoxidase.	Rakita RM, Rosen H.	J Clin Invest	10.1172/jci115372	1991
Pathogenicity	Lethal effect of butylated hydroxyanisole as related to bacterial fatty acid composition.	Post LS, Davidson PM.	Appl Environ Microbiol	10.1128/aem.52.1.214-216.1986	1986
Enzymology	Quantitative analysis of mycobacterial and propionibacterial DNA in lymph nodes of Japanese and European patients with sarcoidosis.	Eishi Y, Suga M, Ishige I, Kobayashi D, Yamada T, Takemura T, Takizawa T, Koike M, Kudoh S, Costabel U, Guzman J, Rizzato G, Gambacorta M, du Bois R, Nicholson AG, Sharma OP, Ando M.	J Clin Microbiol	10.1128/jcm.40.1.198-204.2002	2002
Enzymology	Localization of propionibacterium acnes in granulomas supports a possible etiologic link between sarcoidosis and the bacterium.	Negi M, Takemura T, Guzman J, Uchida K, Furukawa A, Suzuki Y, Iida T, Ishige I, Minami J, Yamada T, Kawachi H, Costabel U, Eishi Y.	Mod Pathol	10.1038/modpathol.2012.80	2012
	Differential rates of digestion of bacteria by freshwater and marine phagotrophic protozoa.	Gonzalez JM, Iriberri J, Egea L, Barcina I.	Appl Environ Microbiol	10.1128/aem.56.6.1851-1857.1990	1990
	Activities of LL-37, a cathelin-associated antimicrobial peptide of human neutrophils.	Turner J, Cho Y, Dinh NN, Waring AJ, Lehrer RI.	Antimicrob Agents Chemother	10.1128/aac.42.9.2206	1998
Phylogeny	Rapid, sensitive, and discriminating identification of Naegleria spp. by real-time PCR and melting-curve analysis.	Robinson BS, Monis PT, Dobson PJ.	Appl Environ Microbiol	10.1128/aem.00113-06	2006
Pathogenicity	Comparative survival of antibiotic-resistant and -sensitive fecal indicator bacteria in estuarine water.	Pettibone GW, Sullivan SA, Shiaris MP.	Appl Environ Microbiol	10.1128/aem.53.6.1241-1245.1987	1987
	Characterization of culturability, protistan grazing, and death of enteric bacteria in aquatic ecosystems.	Gonzalez JM, Iriberri J, Egea L, Barcina I.	Appl Environ Microbiol	10.1128/aem.58.3.998-1004.1992	1992
Metabolism	The permeability of the wall fabric of Escherichia coli and Bacillus subtilis.	Demchick P, Koch AL.	J Bacteriol	10.1128/jb.178.3.768-773.1996	1996
Enzymology	Application of flow cytometry and fluorescent in situ hybridization for assessment of exposures to airborne bacteria.	Lange JL, Thorne PS, Lynch N.	Appl Environ Microbiol	10.1128/aem.63.4.1557-1563.1997	1997
	PCR primers and probes for the 16S rRNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid.	Greisen K, Loeffelholz M, Purohit A, Leong D.	J Clin Microbiol	10.1128/jcm.32.2.335-351.1994	1994
Enzymology	Formic hydrogenlyase induction as a basis for the Eijkman fecal coliform concept.	Hendricks CW.	Appl Microbiol	10.1128/am.19.3.441-445.1970	1970
Phylogeny	Sequence analysis of amplified DNA fragments containing the region encoding the putative lipase substrate-binding domain and genotyping of Aeromonas hydrophila.	Watanabe N, Morita K, Furukawa T, Manzoku T, Endo E, Kanamori M.	Appl Environ Microbiol	10.1128/aem.70.1.145-151.2004	2004
Enzymology	Description and evaluation of the semiautomated 4-hour ATB 32E method for identification of members of the family Enterobacteriaceae.	Freney J, Herve C, Desmonceaux M, Allard F, Boeufgras JM, Monget D, Fleurette J.	J Clin Microbiol	10.1128/jcm.29.1.138-141.1991	1991
	Transcriptional enhancement of the Listeria monocytogenes PCR and simple immunoenzymatic assay of the product using anti-RNA:DNA antibodies.	Blais BW.	Appl Environ Microbiol	10.1128/aem.60.1.348-352.1994	1994
	Sequential appearance of salivary antibodies after oral immunization of axenic mice.	Ebersole JL, Molinari JA, Platt D.	Infect Immun	10.1128/iai.12.2.353-359.1975	1975
Enzymology	Purification of DNA for bacterial productivity estimates.	Burnison BK, Nuttley DJ.	Appl Environ Microbiol	10.1128/aem.56.2.362-365.1990	1990
Phylogeny	Differentiation of the ribosomal protein compositions in the genus Escherichia and its related bacteria.	Osawa S, Ito T, Otaka E.	J Bacteriol	10.1128/jb.107.1.168-178.1971	1971
Phylogeny	Distribution of Staphylococcus species among human clinical specimens and emended description of Staphylococcus caprae.	Kawamura Y, Hou XG, Sultana F, Hirose K, Miyake M, Shu SE, Ezaki T.	J Clin Microbiol	10.1128/jcm.36.7.2038-2042.1998	1998
	Roles of antibodies and complement in phagocytic killing of enterococci.	Arduino RC, Murray BE, Rakita RM.	Infect Immun	10.1128/iai.62.3.987-993.1994	1994
	Survival and enumeration of the fecal indicators Bifidobacterium adolescentis and Escherichia coli in a tropical rain forest watershed.	Carrillo M, Estrada E, Hazen TC.	Appl Environ Microbiol	10.1128/aem.50.2.468-476.1985	1985
	Biological Activity of Recently Discovered Halogenated Marine Natural Products.	Gribble GW.	Mar Drugs	10.3390/md13074044	2015
Phylogeny	DNA hybridization probe for the Pseudomonas fluorescens group.	Festl H, Ludwig W, Schleifer KH.	Appl Environ Microbiol	10.1128/aem.52.5.1190-1194.1986	1986
Enzymology	Polymerase chain reaction-gene probe detection of microorganisms by using filter-concentrated samples.	Bej AK, Mahbubani MH, Dicesare JL, Atlas RM.	Appl Environ Microbiol	10.1128/aem.57.12.3529-3534.1991	1991
	Survival of Candida albicans in tropical marine and fresh waters.	Valdes-Collazo L, Schultz AJ, Hazen TC.	Appl Environ Microbiol	10.1128/aem.53.8.1762-1767.1987	1987
	Development of species-specific DNA probes for Campylobacter jejuni, Campylobacter coli, and Campylobacter lari by polymerase chain reaction fingerprinting.	Giesendorf BA, van Belkum A, Koeken A, Stegeman H, Henkens MH, van der Plas J, Goossens H, Niesters HG, Quint WG.	J Clin Microbiol	10.1128/jcm.31.6.1541-1546.1993	1993
Metabolism	Five different enzymatic activities are associated with the multienzyme complex of fatty acid oxidation from Escherichia coli.	Pramanik A, Pawar S, Antonian E, Schulz H.	J Bacteriol	10.1128/jb.137.1.469-473.1979	1979
	Inhibition of sulfate respiration by 1,8-dihydroxyanthraquinone and other anthraquinone derivatives.	Cooling FI, Maloney CL, Nagel E, Tabinowski J, Odom JM.	Appl Environ Microbiol	10.1128/aem.62.8.2999-3004.1996	1996
	DNA-based diagnostic tests for Salmonella species targeting agfA, the structural gene for thin, aggregative fimbriae.	Doran JL, Collinson SK, Burian J, Sarlos G, Todd EC, Munro CK, Kay CM, Banser PA, Peterkin PI, Kay WW.	J Clin Microbiol	10.1128/jcm.31.9.2263-2273.1993	1993
	Relative susceptibility of acid-fast and non-acid-fast bacteria to ultraviolet light.	Collins FM.	Appl Microbiol	10.1128/am.21.3.411-413.1971	1971
Enzymology	Thiolases of Escherichia coli: purification and chain length specificities.	Feigenbaum J, Schulz H.	J Bacteriol	10.1128/jb.122.2.407-411.1975	1975
Metabolism	Oxidation of microbial iron-sulfur centers by the myeloperoxidase-H2O2-halide antimicrobial system.	Rosen H, Klebanoff SJ.	Infect Immun	10.1128/iai.47.3.613-618.1985	1985
Biotechnology	Estimation of Escherichia coli in raw ground beef.	Stiles ME, Ng LK.	Appl Environ Microbiol	10.1128/aem.40.2.346-351.1980	1980
	Enumeration of Vibrio cholerae O1 in Bangladesh waters by fluorescent-antibody direct viable count.	Brayton PR, Tamplin ML, Huq A, Colwell RR.	Appl Environ Microbiol	10.1128/aem.53.12.2862-2865.1987	1987
	Sterility of salmonid roe and practicality of hatching gnotobiotic salmonid fish.	Trust TJ.	Appl Microbiol	10.1128/am.28.3.340-341.1974	1974
	Size-selective grazing on bacteria by natural assemblages of estuarine flagellates and ciliates.	Gonzalez JM, Sherr EB, Sherr BF.	Appl Environ Microbiol	10.1128/aem.56.3.583-589.1990	1990
	Family- and genus-level 16S rRNA-targeted oligonucleotide probes for ecological studies of methanotrophic bacteria.	Gulledge J, Ahmad A, Steudler PA, Pomerantz WJ, Cavanaugh CM.	Appl Environ Microbiol	10.1128/aem.67.10.4726-4733.2001	2001
	PCR amplification of the fimA gene sequence of Salmonella typhimurium, a specific method for detection of Salmonella spp.	Cohen HJ, Mechanda SM, Lin W.	Appl Environ Microbiol	10.1128/aem.62.12.4303-4308.1996	1996
	Adherence of Pseudomonas aeruginosa to hydrophilic contact lenses and other substrata.	Miller MJ, Ahearn DG.	J Clin Microbiol	10.1128/jcm.25.8.1392-1397.1987	1987
Enzymology	Enrichment for detection of Campylobacter jejuni.	Shimada K, Tsuji H.	J Clin Microbiol	10.1128/jcm.23.5.887-890.1986	1986
	High diversity in DNA of soil bacteria.	Torsvik V, Goksoyr J, Daae FL.	Appl Environ Microbiol	10.1128/aem.56.3.782-787.1990	1990
Metabolism	Prooxidant activity of transferrin and lactoferrin.	Klebanoff SJ, Waltersdorph AM.	J Exp Med	10.1084/jem.172.5.1293	1990
Enzymology	Detection of Mycobacterium tuberculosis by PCR amplification with pan-Mycobacterium primers and hybridization to an M. tuberculosis-specific probe.	Tevere VJ, Hewitt PL, Dare A, Hocknell P, Keen A, Spadoro JP, Young KK.	J Clin Microbiol	10.1128/jcm.34.4.918-923.1996	1996
Biotechnology	Detection of Salmonella spp. in oysters by PCR.	Bej AK, Mahbubani MH, Boyce MJ, Atlas RM.	Appl Environ Microbiol	10.1128/aem.60.1.368-373.1994	1994
Enzymology	Isolation of a multi-enzyme complex of fatty acid oxidation from Escherichia coli.	Binstock JF, Pramanik A, Schulz H.	Proc Natl Acad Sci U S A	10.1073/pnas.74.2.492	1977
	The architecture of the murein (peptidoglycan) in gram-negative bacteria: vertical scaffold or horizontal layer(s)?	Vollmer W, Holtje JV.	J Bacteriol	10.1128/jb.186.18.5978-5987.2004	2004
Enzymology	Evaluating the membrane fecal coliform test by using Escherichia coli as the indicator organism.	Hufham JB.	Appl Microbiol	10.1128/am.27.4.771-776.1974	1974
	Production and characterization of monoclonal antibodies against the O-5 antigen of Salmonella typhimurium lipopolysaccharide.	Jaradat ZW, Zawistowski J.	Appl Environ Microbiol	10.1128/aem.62.1.1-5.1996	1996
	Acetic Acid Bacterial Biota of the Pink Sugar Cane Mealybug, Saccharococcus sacchari, and Its Environs.	Ashbolt NJ, Inkerman PA.	Appl Environ Microbiol	10.1128/aem.56.3.707-712.1990	1990
	A simple RNA probe system for analysis of Listeria monocytogenes polymerase chain reaction products.	Blais BW, Phillippe LM.	Appl Environ Microbiol	10.1128/aem.59.9.2795-2800.1993	1993
Pathogenicity	Antibacterial activity of the lactoperoxidase system in milk against pseudomonads and other gram-negative bacteria.	Bjorck L, Rosen C, Marshall V, Reiter B.	Appl Microbiol	10.1128/am.30.2.199-204.1975	1975
Metabolism	Antibiotic metabolites from a marine pseudomonad.	Wratten SJ, Wolfe MS, Andersen RJ, Faulkner DJ.	Antimicrob Agents Chemother	10.1128/aac.11.3.411	1977
	Electron microscopy of frozen-hydrated bacteria.	Dubochet J, McDowall AW, Menge B, Schmid EN, Lickfeld KG.	J Bacteriol	10.1128/jb.155.1.381-390.1983	1983
	Method for performing aerobic plate counts of anhydrous cosmetics utilizing Tween 60 and Arlacel 80 as dispersing agents.	McConville JF, Anger CB, Anderson DW.	Appl Microbiol	10.1128/am.27.1.5-7.1974	1974
Enzymology	Bacteria associated with false-positive most-probable-number coliform test results for shellfish and estuaries.	Hussong D, Damare JM, Weiner RM, Colwell RR.	Appl Environ Microbiol	10.1128/aem.41.1.35-45.1981	1981
	Ultraviolet bactericidal irradiation of ice.	Ladanyi PA, Morrison SM.	Appl Microbiol	10.1128/am.16.3.463-467.1968	1968
Enzymology	Eubacterial components similar to small nuclear ribonucleoproteins: identification of immunoprecipitable proteins and capped RNAs in a cyanobacterium and a gram-positive eubacterium.	Kovacs SA, O'Neil J, Watcharapijarn J, Moe-Kirvan C, Vijay S, Silva V.	J Bacteriol	10.1128/jb.175.7.1871-1878.1993	1993
	Enteric bacterial growth rates in river water.	Hendricks CW.	Appl Microbiol	10.1128/am.24.2.168-174.1972	1972
Cultivation	Comparison of seven plating media for enumeration of Listeria spp.	Loessner MJ, Bell RH, Jay JM, Shelef LA.	Appl Environ Microbiol	10.1128/aem.54.12.3003-3007.1988	1988
Pathogenicity	Accumulation in gram-postive and gram-negative bacteria as a mechanism of resistance to erythromycin.	Mao JC, Putterman M.	J Bacteriol	10.1128/jb.95.3.1111-1117.1968	1968
Enzymology	Heterotrophic bacteria in an air-handling system.	Hugenholtz P, Fuerst JA.	Appl Environ Microbiol	10.1128/aem.58.12.3914-3920.1992	1992
	Interaction of primate alveolar macrophages and Legionella pneumophila.	Jacobs RF, Locksley RM, Wilson CB, Haas JE, Klebanoff SJ.	J Clin Invest	10.1172/jci111357	1984
Enzymology	Detection of a single viable Cryptosporidium parvum oocyst in environmental water concentrates by reverse transcription-PCR.	Stinear T, Matusan A, Hines K, Sandery M.	Appl Environ Microbiol	10.1128/aem.62.9.3385-3390.1996	1996
Enzymology	Evolution of alkaline phosphatase in marine species of Vibrio.	Woolkalis MJ, Baumann P.	J Bacteriol	10.1128/jb.147.1.36-45.1981	1981
	Rapid visual detection of microorganisms in blood culture.	Sage BH, Neece VR.	J Clin Microbiol	10.1128/jcm.20.1.5-8.1984	1984
	Microbial stabilization of antibiotic-containing urine samples by using the FLORA-STAT urine transport system.	Dorn GL.	J Clin Microbiol	10.1128/jcm.29.10.2169-2174.1991	1991
Pathogenicity	Chlorine demand and inactivation of fungal propagules.	Rosenzweig WD, Minnigh HA, Pipes WO.	Appl Environ Microbiol	10.1128/aem.45.1.182-186.1983	1983
Enzymology	D-amino acid oxidase in leukocytes: a possible D-amino-acid-linked antimicrobial system.	Cline MJ, Lehrer RI.	Proc Natl Acad Sci U S A	10.1073/pnas.62.3.756	1969
Metabolism	Plasmid-associated bacteriocin production by a strain of Carnobacterium piscicola from meat.	Ahn C, Stiles ME.	Appl Environ Microbiol	10.1128/aem.56.8.2503-2510.1990	1990
Enzymology	Fecal indicator bacteria persistence under natural conditions in an ice-covered river.	Davenport CV, Sparrow EB, Gordon RC.	Appl Environ Microbiol	10.1128/aem.32.4.527-536.1976	1976
	Phagocytosis of Cryptococcus neoformans by alveolar macrophages.	Bulmer GS, Tacker JR.	Infect Immun	10.1128/iai.11.1.73-79.1975	1975
Phylogeny	Use of secondary data in numerical taxonomy of the genus Erwinia.	Lockhart WR, Koenig K.	J Bacteriol	10.1128/jb.90.6.1638-1644.1965	1965
Phylogeny	Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases.	Clarridge JE.	Clin Microbiol Rev	10.1128/cmr.17.4.840-862.2004	2004
Enzymology	High levels of Gardnerella vaginalis detected with an oligonucleotide probe combined with elevated pH as a diagnostic indicator of bacterial vaginosis.	Sheiness D, Dix K, Watanabe S, Hillier SL.	J Clin Microbiol	10.1128/jcm.30.3.642-648.1992	1992
	Increase in colonic methanogens and total anaerobes in aging rats.	Maczulak AE, Wolin MJ, Miller TL.	Appl Environ Microbiol	10.1128/aem.55.10.2468-2473.1989	1989
Pathogenicity	Effect of sodium polyanetholesulfonate on antimicrobial systems in blood.	Belding ME, Klebanoff SJ.	Appl Microbiol	10.1128/am.24.5.691-698.1972	1972
Metabolism	Degradation of uric acid by certain aerobic bacteria.	Rouf MA, Lomprey RF.	J Bacteriol	10.1128/jb.96.3.617-622.1968	1968
	Antimicrobial peptides and proteins of the horse--insights into a well-armed organism.	Bruhn O, Grotzinger J, Cascorbi I, Jung S.	Vet Res	10.1186/1297-9716-42-98	2011
	Evaluation of aquarium antibiotic formulations.	Trust TJ, Chipman DC.	Antimicrob Agents Chemother	10.1128/aac.6.4.379	1974
Phylogeny	Numerical taxonomy and ecology of petroleum-degrading bacteria.	Austin B, Calomiris JJ, Walker JD, Colwell RR.	Appl Environ Microbiol	10.1128/aem.34.1.60-68.1977	1977
	Reexamination of the association between melting point, buoyant density, and chemical base composition of deoxyribonucleic acid.	De Ley J.	J Bacteriol	10.1128/jb.101.3.738-754.1970	1970
	Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition).	Cossarizza A, Chang HD, Radbruch A, Acs A, Adam D, Adam-Klages S, Agace WW, Aghaeepour N, Akdis M, Allez M, Almeida LN, Alvisi G, Anderson G, Andra I, Annunziato F, Anselmo A, Bacher P, Baldari CT, Bari S, Barnaba V, Barros-Martins J, Battistini L, Bauer W, Baumgart S, Baumgarth N, Baumjohann D, Baying B, Bebawy M, Becher B, Beisker W, Benes V, Beyaert R, Blanco A, Boardman DA, Bogdan C, Borger JG, Borsellino G, Boulais PE, Bradford JA, Brenner D, Brinkman RR, Brooks AES, Busch DH, Buscher M, Bushnell TP, Calzetti F, Cameron G, Cammarata I, Cao X, Cardell SL, Casola S, Cassatella MA, Cavani A, Celada A, Chatenoud L, Chattopadhyay PK, Chow S, Christakou E, Cicin-Sain L, Clerici M, Colombo FS, Cook L, Cooke A, Cooper AM, Corbett AJ, Cosma A, Cosmi L, Coulie PG, Cumano A, Cvetkovic L, Dang VD, Dang-Heine C, Davey MS, Davies D, De Biasi S, Del Zotto G, Dela Cruz GV, Delacher M, Della Bella S, Dellabona P, Deniz G, Dessing M, Di Santo JP, Diefenbach A, Dieli F, Dolf A, Dorner T, Dress RJ, Dudziak D, Dustin M, Dutertre CA, Ebner F, Eckle SBG, Edinger M, Eede P, Ehrhardt GRA, Eich M, Engel P, Engelhardt B, Erdei A, Esser C, Everts B, Evrard M, Falk CS, Fehniger TA, Felipo-Benavent M, Ferry H, Feuerer M, Filby A, Filkor K, Fillatreau S, Follo M, Forster I, Foster J, Foulds GA, Frehse B, Frenette PS, Frischbutter S, Fritzsche W, Galbraith DW, Gangaev A, Garbi N, Gaudilliere B, Gazzinelli RT, Geginat J, Gerner W, Gherardin NA, Ghoreschi K, Gibellini L, Ginhoux F, Goda K, Godfrey DI, Goettlinger C, Gonzalez-Navajas JM, Goodyear CS, Gori A, Grogan JL, Grummitt D, Grutzkau A, Haftmann C, Hahn J, Hammad H, Hammerling G, Hansmann L, Hansson G, Harpur CM, Hartmann S, Hauser A, Hauser AE, Haviland DL, Hedley D, Hernandez DC, Herrera G, Herrmann M, Hess C, Hofer T, Hoffmann P, Hogquist K, Holland T, Hollt T, Holmdahl R, Hombrink P, Houston JP, Hoyer BF, Huang B, Huang FP, Huber JE, Huehn J, Hundemer M, Hunter CA, Hwang WYK, Iannone A, Ingelfinger F, Ivison SM, Jack HM, Jani PK, Javega B, Jonjic S, Kaiser T, Kalina T, Kamradt T, Kaufmann SHE, Keller B, Ketelaars SLC, Khalilnezhad A, Khan S, Kisielow J, Klenerman P, Knopf J, Koay HF, Kobow K, Kolls JK, Kong WT, Kopf M, Korn T, Kriegsmann K, Kristyanto H, Kroneis T, Krueger A, Kuhne J, Kukat C, Kunkel D, Kunze-Schumacher H, Kurosaki T, Kurts C, Kvistborg P, Kwok I, Landry J, Lantz O, Lanuti P, LaRosa F, Lehuen A, LeibundGut-Landmann S, Leipold MD, Leung LYT, Levings MK, Lino AC, Liotta F, Litwin V, Liu Y, Ljunggren HG, Lohoff M, Lombardi G, Lopez L, Lopez-Botet M, Lovett-Racke AE, Lubberts E, Luche H, Ludewig B, Lugli E, Lunemann S, Maecker HT, Maggi L, Maguire O, Mair F, Mair KH, Mantovani A, Manz RA, Marshall AJ, Martinez-Romero A, Martrus G, Marventano I, Maslinski W, Matarese G, Mattioli AV, Maueroder C, Mazzoni A, McCluskey J, McGrath M, McGuire HM, McInnes IB, Mei HE, Melchers F, Melzer S, Mielenz D, Miller SD, Mills KHG, Minderman H, Mjosberg J, Moore J, Moran B, Moretta L, Mosmann TR, Muller S, Multhoff G, Munoz LE, Munz C, Nakayama T, Nasi M, Neumann K, Ng LG, Niedobitek A, Nourshargh S, Nunez G, O'Connor JE, Ochel A, Oja A, Ordonez D, Orfao A, Orlowski-Oliver E, Ouyang W, Oxenius A, Palankar R, Panse I, Pattanapanyasat K, Paulsen M, Pavlinic D, Penter L, Peterson P, Peth C, Petriz J, Piancone F, Pickl WF, Piconese S, Pinti M, Pockley AG, Podolska MJ, Poon Z, Pracht K, Prinz I, Pucillo CEM, Quataert SA, Quatrini L, Quinn KM, Radbruch H, Radstake TRDJ, Rahmig S, Rahn HP, Rajwa B, Ravichandran G, Raz Y, Rebhahn JA, Recktenwald D, Reimer D, Reis e Sousa C, Remmerswaal EBM, Richter L, Rico LG, Riddell A, Rieger AM, Robinson JP, Romagnani C, Rubartelli A, Ruland J, Saalmuller A, Saeys Y, Saito T, Sakaguchi S, Sala-de-Oyanguren F, Samstag Y, Sanderson S, Sandrock I, Santoni A, Sanz RB, Saresella M, Sautes-Fridman C, Sawitzki B, Schadt L, Scheffold A, Scherer HU, Schiemann M, Schildberg FA, Schimisky E, Schlitzer A, Schlosser J, Schmid S, Schmitt S, Schober K, Schraivogel D, Schuh W, Schuler T, Schulte R, Schulz AR, Schulz SR, Scotta C, Scott-Algara D, Sester DP, Shankey TV, Silva-Santos B, Simon AK, Sitnik KM, Sozzani S, Speiser DE, Spidlen J, Stahlberg A, Stall AM, Stanley N, Stark R, Stehle C, Steinmetz T, Stockinger H, Takahama Y, Takeda K, Tan L, Tarnok A, Tiegs G, Toldi G, Tornack J, Traggiai E, Trebak M, Tree TIM, Trotter J, Trowsdale J, Tsoumakidou M, Ulrich H, Urbanczyk S, van de Veen W, van den Broek M, van der Pol E, Van Gassen S, Van Isterdael G, van Lier RAW, Veldhoen M, Vento-Asturias S, Vieira P, Voehringer D, Volk HD, von Borstel A, von Volkmann K, Waisman A, Walker RV, Wallace PK, Wang SA, Wang XM, Ward MD, Ward-Hartstonge KA, Warnatz K, Warnes G, Warth S, Waskow C, Watson JV, Watzl C, Wegener L, Weisenburger T, Wiedemann A, Wienands J, Wilharm A, Wilkinson RJ, Willimsky G, Wing JB, Winkelmann R, Winkler TH, Wirz OF, Wong A, Wurst P, Yang JHM, Yang J, Yazdanbakhsh M, Yu L, Yue A, Zhang H, Zhao Y, Ziegler SM, Zielinski C, Zimmermann J, Zychlinsky A.	Eur J Immunol	10.1002/eji.201970107	2019
	Guidelines for the use of flow cytometry and cell sorting in immunological studies.	Cossarizza A, Chang HD, Radbruch A, Akdis M, Andra I, Annunziato F, Bacher P, Barnaba V, Battistini L, Bauer WM, Baumgart S, Becher B, Beisker W, Berek C, Blanco A, Borsellino G, Boulais PE, Brinkman RR, Buscher M, Busch DH, Bushnell TP, Cao X, Cavani A, Chattopadhyay PK, Cheng Q, Chow S, Clerici M, Cooke A, Cosma A, Cosmi L, Cumano A, Dang VD, Davies D, De Biasi S, De Biasi S, Del Zotto G, Della Bella S, Dellabona P, Deniz G, Dessing M, Diefenbach A, Di Santo J, Dieli F, Dolf A, Donnenberg VS, Dorner T, Ehrhardt GRA, Endl E, Engel P, Engelhardt B, Esser C, Everts B, Dreher A, Falk CS, Fehniger TA, Filby A, Fillatreau S, Follo M, Forster I, Foster J, Foulds GA, Frenette PS, Galbraith D, Garbi N, Garcia-Godoy MD, Geginat J, Ghoreschi K, Gibellini L, Goettlinger C, Goodyear CS, Gori A, Grogan J, Gross M, Grutzkau A, Grummitt D, Hahn J, Hammer Q, Hauser AE, Haviland DL, Hedley D, Herrera G, Herrmann M, Hiepe F, Holland T, Hombrink P, Houston JP, Hoyer BF, Huang B, Hunter CA, Iannone A, Jack HM, Javega B, Jonjic S, Juelke K, Jung S, Kaiser T, Kalina T, Keller B, Khan S, Kienhofer D, Kroneis T, Kunkel D, Kurts C, Kvistborg P, Lannigan J, Lantz O, Larbi A, LeibundGut-Landmann S, Leipold MD, Levings MK, Litwin V, Liu Y, Lohoff M, Lombardi G, Lopez L, Lovett-Racke A, Lubberts E, Ludewig B, Lugli E, Maecker HT, Martrus G, Matarese G, Maueroder C, McGrath M, McInnes I, Mei HE, Melchers F, Melzer S, Mielenz D, Mills K, Mirrer D, Mjosberg J, Moore J, Moran B, Moretta A, Moretta L, Mosmann TR, Muller S, Muller W, Munz C, Multhoff G, Munoz LE, Murphy KM, Nakayama T, Nasi M, Neudorfl C, Nolan J, Nourshargh S, O'Connor JE, Ouyang W, Oxenius A, Palankar R, Panse I, Peterson P, Peth C, Petriz J, Philips D, Pickl W, Piconese S, Pinti M, Pockley AG, Podolska MJ, Pucillo C, Quataert SA, Radstake TRDJ, Rajwa B, Rebhahn JA, Recktenwald D, Remmerswaal EBM, Rezvani K, Rico LG, Robinson JP, Romagnani C, Rubartelli A, Ruckert B, Ruland J, Sakaguchi S, Sala-de-Oyanguren F, Samstag Y, Sanderson S, Sawitzki B, Scheffold A, Schiemann M, Schildberg F, Schimisky E, Schmid SA, Schmitt S, Schober K, Schuler T, Schulz AR, Schumacher T, Scotta C, Shankey TV, Shemer A, Simon AK, Spidlen J, Stall AM, Stark R, Stehle C, Stein M, Steinmetz T, Stockinger H, Takahama Y, Tarnok A, Tian Z, Toldi G, Tornack J, Traggiai E, Trotter J, Ulrich H, van der Braber M, van Lier RAW, Veldhoen M, Vento-Asturias S, Vieira P, Voehringer D, Volk HD, von Volkmann K, Waisman A, Walker R, Ward MD, Warnatz K, Warth S, Watson JV, Watzl C, Watzl C, Wegener L, Wiedemann A, Wienands J, Willimsky G, Wing J, Wurst P, Yu L, Yue A, Zhang Q, Zhao Y, Ziegler S, Zimmermann J.	Eur J Immunol	10.1002/eji.201646632	2017
Metabolism	Bacterial Actin-Specific Endoproteases Grimelysin and Protealysin as Virulence Factors Contributing to the Invasive Activities of Serratia.	Khaitlina S, Bozhokina E, Tsaplina O, Efremova T.	Int J Mol Sci	10.3390/ijms21114025	2020
	(Trifluoromethoxy)Phenylboronic Acids: Structures, Properties, and Antibacterial Activity.	Adamczyk-Wozniak A, Gozdalik JT, Kaczorowska E, Durka K, Wieczorek D, Zarzeczanska D, Sporzynski A.	Molecules	10.3390/molecules26072007	2021
	5-Trifluoromethyl-2-formylphenylboronic Acid.	Adamczyk-Wozniak A, Gozdalik JT, Wieczorek D, Madura ID, Kaczorowska E, Brzezinska E, Sporzynski A, Lipok J.	Molecules	10.3390/molecules25040799	2020
Metabolism	[Invasion of Escherichia coli A2 induces reorganization of actin microfilaments in Hep-2 cells].	Efremova TN, Ender NA, Brudnaia MS, Komissarchik IaIu, Khaitlina SIu.	Tsitologiia		1998
	Phytochemical Analysis and Bioactive Properties of Opuntia dillenii Flower Extracts, Compound, and Essential Oil.	Elouazkiti M, Zefzoufi M, Elyacoubi H, Gadhi C, Bouamama H, Rochdi A.	Int J Food Sci	10.1155/2024/6131664	2024
	Anti-Infective Secondary Metabolites of the Marine Cyanobacterium Lyngbya Morphotype between 1979 and 2022.	Youssef DTA, Mufti SJ, Badiab AA, Shaala LA.	Mar Drugs	10.3390/md20120768	2022
	Development of New Antimicrobial Oleanonic Acid Polyamine Conjugates.	Khusnutdinova EF, Sinou V, Babkov DA, Kazakova O, Brunel JM.	Antibiotics (Basel)	10.3390/antibiotics11010094	2022
Metabolism	Microorganisms and Maillard reaction products: a review of the literature and recent findings.	Helou C, Marier D, Jacolot P, Abdennebi-Najar L, Niquet-Leridon C, Tessier FJ, Gadonna-Widehem P.	Amino Acids	10.1007/s00726-013-1496-y	2014
	Antibacterial and Immunomodulatory Properties of Acellular Wharton's Jelly Matrix.	Dubus M, Scomazzon L, Chevrier J, Ledouble C, Baldit A, Braux J, Gindraux F, Boulagnon C, Audonnet S, Colin M, Rammal H, Mauprivez C, Kerdjoudj H.	Biomedicines	10.3390/biomedicines10020227	2022
Pathogenicity	Evaluation of an oral subchronic exposure of deoxynivalenol on the composition of human gut microbiota in a model of human microbiota-associated rats.	Saint-Cyr MJ, Perrin-Guyomard A, Houee P, Rolland JG, Laurentie M.	PLoS One	10.1371/journal.pone.0080578	2013
Pathogenicity	Escherichia coli morphological changes and lipid A removal induced by reduced pressure nitrogen afterglow exposure.	Zerrouki H, Rizzati V, Bernis C, Negre-Salvayre A, Sarrette JP, Cousty S.	PLoS One	10.1371/journal.pone.0116083	2015
	Freeze-dried fecal samples are biologically active after long-lasting storage and suited to fecal microbiota transplantation in a preclinical murine model of Clostridioides difficile infection.	Reygner J, Charrueau C, Delannoy J, Mayeur C, Robert V, Cuinat C, Meylheuc T, Mauras A, Augustin J, Nicolis I, Modoux M, Joly F, Waligora-Dupriet AJ, Thomas M, Kapel N.	Gut Microbes	10.1080/19490976.2020.1759489	2020
	Behavior of Escherichia coli cells and Bacillus cereus spores on poplar wood crates by impedance measurements.	Revol-Junelles AM, Miguindou-Mabiala R, Roger-Maigne D, Milliere JB.	J Food Prot	10.4315/0362-028x-68.1.80	2005
	Ionic Liquid-Based Materials for Biomedical Applications.	Correia DM, Fernandes LC, Fernandes MM, Hermenegildo B, Meira RM, Ribeiro C, Ribeiro S, Reguera J, Lanceros-Mendez S.	Nanomaterials (Basel)	10.3390/nano11092401	2021
	Unraveling the Phytochemistry, Traditional Uses, and Biological and Pharmacological Activities of Thymus algeriensis Boiss. & Reut.	Mahdi I, Bakrim WB, Bitchagno GTM, Annaz H, Mahmoud MF, Sobeh M.	Oxid Med Cell Longev	10.1155/2022/6487430	2022
	Production of polyclonal and monoclonal antibodies against group A, B, and C capsular polysaccharides of Neisseria meningitidis and preparation of latex reagents.	Nato F, Mazie JC, Fournier JM, Slizewicz B, Sagot N, Guibourdenche M, Postic D, Riou JY.	J Clin Microbiol	10.1128/jcm.29.7.1447-1452.1991	1991
	Bacterial Degraders of Coexisting Dichloromethane, Benzene, and Toluene, Identified by Stable-Isotope Probing.	Yoshikawa M, Zhang M, Kurisu F, Toyota K.	Water Air Soil Pollut	10.1007/s11270-017-3604-1	2017
	Investigating the antibacterial mode of Limosilactobacillus reuteri LR08 regulated by soybean proteins and peptides.	Wang J, Zhang C, Wen Y, Zhang Y, Zhu S, Liu X.	Food Chem	10.1016/j.foodchem.2024.138780	2024
	Volatile Fatty Acids Effective as Antibacterial Agents against Three Enteric Bacteria during Mesophilic Anaerobic Incubation.	Otite SV, Lag-Brotons AJ, Ezemonye LI, Martin AD, Pickup RW, Semple KT.	Molecules	10.3390/molecules29091908	2024
	Safety and efficacy of a feed additive consisting of l-cystine produced with Escherichia coliDSM 34232 for all animal species (Wacker Chemie AG).	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Villa RE, Azimonti G, Bonos E, Christensen H, Durjava M, Dusemund B, Gehring R, Glandorf B, Kouba M, Lopez-Alonso M, Marcon F, Nebbia C, Pechova A, Prieto-Maradona M, Rohe I, Theodoridou K, Anguita M, Innocenti ML, Firmino JP.	EFSA J	10.2903/j.efsa.2025.9688	2025
	A Comparative Study of Extended Gentamicin and Tobramycin Release and Antibacterial Efficacy from Palacos and Simplex Acrylic Cements.	Coraca-Huber D, Humez M, Kuhn KD.	Microorganisms	10.3390/microorganisms13092174	2025
	Spray-Drying Microencapsulation of Artemisia herba-alba Phenolic Extract: Physicochemical Properties, Structural Characterization, and Bioactivity.	Lemmadi S, Dumas E, Adoui F, Agusti G, Vessot-Crastes S, Medfai W, Gharsallaoui A.	Molecules	10.3390/molecules30193904	2025
Pathogenicity	Different effects of soybean protein and its derived peptides on the growth and metabolism of Bifidobacterium animalis subsp. animalis JCM 1190.	Li W, Li H, Zhang Y, He L, Zhang C, Liu X.	Food Funct	10.1039/d1fo00480h	2021
	Antibacterial potential and in silico analysis of inflorescence-derived essential oils from three Eucalyptus species.	Khedhri S, Polito F, Amri I, Nazzaro F, Fratianni F, De Feo V, Hamrouni L.	Sci Rep	10.1038/s41598-025-24957-x	2025
	Fatty Acid Profile and Some Useful Biological Aspects of Borage, Calophyllum, and Prickly Pear Seed Oils: Implications for Health and Dietary Use.	Fratianni F, Coppola F, Tavaniello S, Ombra MN, De Giulio B, D'Agostino N, Zengin G, Coppola R, Nazzaro F.	Antioxidants (Basel)	10.3390/antiox14060661	2025
	At what cost? The impact of bacteriophage resistance on the growth kinetics and protein synthesis of Escherichia coli.	Landor LAI, Tjendra J, Erstad K, Krabberod AK, Topper JP, Vage S.	Environ Microbiol Rep	10.1111/1758-2229.70046	2024
	D-amino Acids Ameliorate Experimental Colitis and Cholangitis by Inhibiting Growth of Proteobacteria: Potential Therapeutic Role in Inflammatory Bowel Disease.	Umeda S, Sujino T, Miyamoto K, Yoshimatsu Y, Harada Y, Nishiyama K, Aoto Y, Adachi K, Hayashi N, Amafuji K, Moritoki N, Shibata S, Sasaki N, Mita M, Tanemoto S, Ono K, Mikami Y, Sasabe J, Takabayashi K, Hosoe N, Suzuki T, Sato T, Atarashi K, Teratani T, Ogata H, Nakamoto N, Shiomi D, Ashida H, Kanai T.	Cell Mol Gastroenterol Hepatol	10.1016/j.jcmgh.2023.08.002	2023
	Comparative Analysis of Concentration and Quantification Methods for Antibiotic Resistance Genes and Their Phage-Mediated Dissemination in Treated Wastewater and Biosolids.	Falco I, Allende A, Cutrupi F, Aznar R, Sanchez G, Truchado P.	Pathogens	10.3390/pathogens14101050	2025
	Cultivating efficiency: high-throughput growth analysis of anaerobic bacteria in compact microplate readers.	Snoeyenbos-West OLO, Guerrero CR, Valencia M, Carini P.	Microbiol Spectr	10.1128/spectrum.03650-23	2024
Phylogeny	Rapid detection and discrimination of food-related bacteria using IR-microspectroscopy in combination with multivariate statistical analysis.	Klein D, Breuch R, Reinmuller J, Engelhard C, Kaul P.	Talanta	10.1016/j.talanta.2021.122424	2021
	Comparative evaluation of long-term preservation methods for morphologically distinct bacteriophages.	Huang W, Khan Mirzaei M, Deng L.	Microbiol Spectr	10.1128/spectrum.01442-24	2025
	Efficient Defect-Driven Cation Exchange beyond the Nanoscale Semiconductors toward Antibacterial Functionalization.	Polivtseva S, Volobujeva O, Kuznietsov I, Kaupmees R, Danilson M, Krustok J, Molaiyan P, Hu T, Lassi U, Klopov M, van Gog H, van Huis MA, Kaur H, Ivask A, Rosenberg M, Gathergood N, Ni C, Grossberg-Kuusk M.	ACS Appl Mater Interfaces	10.1021/acsami.4c11425	2024
	Characterization of the phyllosphere virome of fresh vegetables and potential transfer to the human gut.	Park JW, Yun YE, Cho JA, Yoon SI, In SA, Park EJ, Kim MS.	Nat Commun	10.1038/s41467-025-58856-6	2025
	Investigation on L-rhamnose metabolism of Loigolactobacillus coryniformis subsp. coryniformis DSM 20001 and its propionate-containing fermentates.	Elvan Gezer M, Gravlund Fonss K, Bambace MF, Marietou A, Sandberg Overby S, Sundekilde U, Schwab C.	Appl Environ Microbiol	10.1128/aem.01613-24	2025
	Antimicrobial, anti-enzymatic and antioxidant activities of essential oils from some Tunisian Eucalyptus species.	Ayed A, Caputo L, De Feo V, Elshafie HS, Fratianni F, Nazzaro F, Hamrouni L, Amri I, Mabrouk Y, Camele I, Polito F.	Heliyon	10.1016/j.heliyon.2024.e34518	2024
Phylogeny	Identification of acacia gum fermenting bacteria from pooled human feces using anaerobic enrichment culture.	Rawi MH, Tan HY, Sarbini SR.	Front Microbiol	10.3389/fmicb.2023.1245042	2023
	Understanding the NaCl-dependent behavior of hydrogen production of a marine bacterium, Vibrio tritonius.	Al-Saari N, Amada E, Matsumura Y, Tanaka M, Mino S, Sawabe T.	PeerJ	10.7717/peerj.6769	2019
Phylogeny	Distribution, Phylogeny and Evolution of Clinical and Environmental Vibrio vulnificus Antibiotic-Resistant Genes.	Geng N, Sun G, Liu WJ, Gao BC, Sun C, Xu C, Hua E, Xu L.	Evol Bioinform Online	10.1177/11769343221134400	2022
	Characterization of phage vB_EcoS-EE09 infecting E. coli DSM613 Isolated from Wastewater Treatment Plant Effluent and Comparative Proteomics of the Infected and Non-Infected Host	Barrero-Canosa J, Wang L, Oyugi A, Klaes S, Fischer P, Adrian L, Szewzyk U, Cooper M.	Microorganisms		2023
Genetics	The impact of storage buffer and storage conditions on fecal samples for bacteriophage infectivity and metavirome analyses.	Zhai X, Castro-Mejia JL, Gobbi A, Aslampaloglou A, Kot W, Nielsen DS, Deng L.	Microbiome	10.1186/s40168-023-01632-9	2023
Pathogenicity	Growth stimulation of Bifidobacterium from human colon using daikenchuto in an in vitro model of human intestinal microbiota.	Sasaki K, Sasaki D, Sasaki K, Nishidono Y, Yamamori A, Tanaka K, Kondo A.	Sci Rep	10.1038/s41598-021-84167-z	2021
	Strong antagonism of an endophyte of Fraxinus excelsior towards the ash dieback pathogen, Hymenoscyphus fraxineus, is mediated by the antifungal secondary metabolite PF1140.	Demir O, Schulz B, Rabsch L, Steinert M, Surup F.	Appl Environ Microbiol	10.1128/aem.00665-24	2024
	Assessing Normandy Soil Microbial Diversity for Antibacterial Activities Using Traditional Culture and iChip Methods.	Perrier F, Morice J, Gueulle S, Gery A, Riboulet-Bisson E, Garon D, Muller C, Desriac F.	Microorganisms	10.3390/microorganisms12122422	2024
	MetaPep: A core peptide database for faster human gut metaproteomics database searches.	Sun Z, Ning Z, Cheng K, Duan H, Wu Q, Mayne J, Figeys D.	Comput Struct Biotechnol J	10.1016/j.csbj.2023.08.025	2023
	Cell-free expression with a quartz crystal microbalance enables rapid, dynamic, and label-free characterization of membrane-interacting proteins.	Khakimzhan A, Izri Z, Thompson S, Dmytrenko O, Fischer P, Beisel C, Noireaux V.	Commun Biol	10.1038/s42003-024-06690-9	2024
	Chemical Composition, Antibacterial Properties, and Anti-Enzymatic Effects of Eucalyptus Essential Oils Sourced from Tunisia.	Khedhri S, Polito F, Caputo L, De Feo V, Khamassi M, Kochti O, Hamrouni L, Mabrouk Y, Nazzaro F, Fratianni F, Amri I.	Molecules	10.3390/molecules28207211	2023
	Molecular Characterization of Some Bacillus Species from Vegetables and Evaluation of Their Antimicrobial and Antibiotic Potency.	Koilybayeva M, Shynykul Z, Ustenova G, Abzaliyeva S, Alimzhanova M, Amirkhanova A, Turgumbayeva A, Mustafina K, Yeleken G, Raganina K, Kapsalyamova E.	Molecules	10.3390/molecules28073210	2023
	Physicochemical and Biological Characterization of Encapsulated Olive Leaf Extracts for Food Preservation.	Medfai W, Oueslati I, Dumas E, Harzalli Z, Viton C, Mhamdi R, Gharsallaoui A.	Antibiotics (Basel)	10.3390/antibiotics12060987	2023
	Evaluation of the Wound Healing Potential of Cynara humilis Extracts in the Treatment of Skin Burns.	Salhi N, El Guourrami O, Rouas L, Moussaid S, Moutawalli A, Benkhouili FZ, Ameggouz M, Alshahrani MM, Al Awadh AA, Bouyahya A, Faouzi MEA, Cherrah Y.	Evid Based Complement Alternat Med	10.1155/2023/5855948	2023
	A MALDI-ToF mass spectrometry database for identification and classification of highly pathogenic bacteria.	Lasch P, Beyer W, Bosch A, Borriss R, Drevinek M, Dupke S, Ehling-Schulz M, Gao X, Grunow R, Jacob D, Klee SR, Paauw A, Rau J, Schneider A, Scholz HC, Stammler M, Thanh Tam LT, Tomaso H, Werner G, Doellinger J.	Sci Data	10.1038/s41597-025-04504-z	2025
Phylogeny	Siamese Networks for Clinically Relevant Bacteria Classification Based on Raman Spectroscopy.	Contreras J, Mostafapour S, Popp J, Bocklitz T.	Molecules	10.3390/molecules29051061	2024
Genetics	Whole Genome Sequencing and Phenotypic Analysis of Antibiotic Resistance in Filifactor alocis Isolates.	Romero-Martinez R, Maher A, Alvarez G, Figueiredo R, Leon R, Arredondo A.	Antibiotics (Basel)	10.3390/antibiotics12061059	2023
Phylogeny	Discrimination of Stressed and Non-Stressed Food-Related Bacteria Using Raman-Microspectroscopy.	Klein D, Breuch R, Reinmuller J, Engelhard C, Kaul P.	Foods	10.3390/foods11101506	2022
	Water-Soluble Ruthenium (II) Complex Derived From Optically Pure Limonene and Its Microencapsulation Are Efficient Tools Against Bacterial Food Pathogen Biofilms: Escherichia coli, Staphylococcus aureus, Enteroccocus faecalis, and Listeria monocytogenes.	Khelissa S, El Fannassi Y, Mechmechani S, Alhuthali S, El Amrani MA, Gharsallaoui A, Barras A, Chihib NE.	Front Microbiol	10.3389/fmicb.2021.711326	2021
	Lacticaseibacillus rhamnosus CA15 (DSM 33960) as a Candidate Probiotic Strain for Human Health.	Pino A, Vaccalluzzo A, Caggia C, Balzaretti S, Vanella L, Sorrenti V, Ronkainen A, Satokari R, Randazzo CL.	Nutrients	10.3390/nu14224902	2022
	Comparison of PCR-HRM, colorimetric LAMP and culture based diagnostic assays in the detection of endometritis caused by Streptococcus equi subsp. zooepidemicus in mares.	Garner C, Stephen C, Pant SD, Ghorashi SA.	Vet Res Commun	10.1007/s11259-022-10047-0	2023
Phylogeny	Genomic perspective on the bacillus causing paratyphoid B fever.	Hawkey J, Frezal L, Tran Dien A, Zhukova A, Brown D, Chattaway MA, Simon S, Izumiya H, Fields PI, De Lappe N, Kaftyreva L, Xu X, Isobe J, Clermont D, Njamkepo E, Akeda Y, Issenhuth-Jeanjean S, Makarova M, Wang Y, Hunt M, Jenkins BM, Ravel M, Guibert V, Serre E, Matveeva Z, Fabre L, Cormican M, Yue M, Zhu B, Morita M, Iqbal Z, Silva Nodari C, Pardos de la Gandara M, Weill FX.	Nat Commun	10.1038/s41467-024-54418-4	2024
	Acquisition of novel antibiotic resistance genes by the bacterial predator Bacteriovorax sp. As-1.	Kohadie FB, Heo YU, Mun W, Choi S, Park S, Lee Y, Kim DH, Mitchell RJ.	ISME J	10.1093/ismejo/wraf245	2025
	Physicochemical and sensory characterization of functional synbiotic Labneh fortified with the bacteriocin-producing Lactiplantibacillus plantarum strain GA7 and nano-encapsulated Tirmania pinoyi extract.	Daba GM, Elkhateeb WA, Saleh SAA, Soliman TN, El-Dein AN.	Microb Cell Fact	10.1186/s12934-024-02631-7	2025
	Molecular Characterization of Bacterial Isolates from Soil Samples and Evaluation of their Antibacterial Potential against MDRS.	Sadiqi S, Hamza M, Ali F, Alam S, Shakeela Q, Ahmed S, Ayaz A, Ali S, Saqib S, Ullah F, Ullah F, Zaman W.	Molecules	10.3390/molecules27196281	2022
	Bioactive Naphtho-alpha-Pyranones from Two Endophytic Fungi of the Genus Polyphilus.	Wennrich JP, Sepanian E, Ebada SS, Llanos-Lopez NA, Ashrafi S, Maier W, Kurtan T, Stadler M.	Antibiotics (Basel)	10.3390/antibiotics12081273	2023
	Antibacterial activity of solid surfaces is critically dependent on relative humidity, inoculum volume, and organic soiling.	Kaur H, Rosenberg M, Kook M, Danilian D, Kisand V, Ivask A.	FEMS Microbes	10.1093/femsmc/xtad022	2024
	Antibiotic resistance and siderophores production by clinical Escherichia coli strains.	Khazaal MT, El-Hendawy HH, Mabrouk MI, Faraag AHI, Bakkar MR.	BioTechnologia (Pozn)	10.5114/bta.2022.116211	2022
	Identification of Bioactive Peptides from Nannochloropsis oculata Using a Combination of Enzymatic Treatment, in Silico Analysis and Chemical Synthesis.	Hayes M, Mora L, Lucakova S.	Biomolecules	10.3390/biom12121806	2022
	Inhibition of food-spoilage and foodborne pathogenic bacteria by a nisin Z-producing Lactococcus lactis subsp. lactis KT2W2L	Hwanhlem N, Ivanova T, Haertle T, Jaffres E, Dousset X.	Lebensm Wiss Technol	10.1016/j.lwt.2017.04.052	2017
	Molecular Networking-Driven Discovery of Antibacterial Perinadines, New Tetracyclic Alkaloids from the Marine Sponge-Derived Fungus Aspergillus sp.	Liu Y, Ding L, Shi Y, Yan X, Wu B, He S.	ACS Omega	10.1021/acsomega.2c00402	2022
	Irritable Bowel Syndrome: Treating the Gut and Brain/Mind at the Same Time.	Jayasinghe M, Damianos JA, Prathiraja O, Oorloff MD, Nagalmulla K GM, Nadella A, Caldera D, Mohtashim A.	Cureus	10.7759/cureus.43404	2023
	Phytochemical analysis and anti-microbial activities of Artemisia spp. and rapid isolation methods of artemisinin.	Mohammed S, Dekabo A, Hailu T.	AMB Express	10.1186/s13568-022-01346-5	2022
Genetics	Genomic Investigation of Desert Streptomyces huasconensis D23 Reveals Its Environmental Adaptability and Antimicrobial Activity.	Wen Y, Zhang G, Bahadur A, Xu Y, Liu Y, Tian M, Ding W, Chen T, Zhang W, Liu G.	Microorganisms	10.3390/microorganisms10122408	2022
	In Vitro Screening of a 1280 FDA-Approved Drugs Library against Multidrug-Resistant and Extensively Drug-Resistant Bacteria.	Peyclit L, Baron SA, Hadjadj L, Rolain JM.	Antibiotics (Basel)	10.3390/antibiotics11030291	2022
	Chemical Composition and Phytotoxic, Antibacterial and Antibiofilm Activity of the Essential Oils of Eucalyptus occidentalis, E. striaticalyx and E. stricklandii	Khammassi M, Polito F, Amri I, Khedhri S, Hamrouni L, Nazzaro F, Fratianni F, De Feo V.	Molecules	10.3390/molecules27185820	2022
	Gas Chromatography-Mass Spectrometry Profiling of Volatile Metabolites Produced by Some Bacillus spp. and Evaluation of Their Antibacterial and Antibiotic Activities.	Koilybayeva M, Shynykul Z, Ustenova G, Waleron K, Jonca J, Mustafina K, Amirkhanova A, Koloskova Y, Bayaliyeva R, Akhayeva T, Alimzhanova M, Turgumbayeva A, Kurmangaliyeva G, Kantureyeva A, Batyrbayeva D, Alibayeva Z.	Molecules	10.3390/molecules28227556	2023
	Contribution to the Evaluation of Physicochemical Properties, Total Phenolic Content, Antioxidant Potential, and Antimicrobial Activity of Vinegar Commercialized in Morocco.	Kara M, Assouguem A, Fadili ME, Benmessaoud S, Alshawwa SZ, Kamaly OA, Saghrouchni H, Zerhouni AR, Bahhou J.	Molecules	10.3390/molecules27030770	2022
	Computational and Experimental Study of Metal-Organic Frameworks (MOFs) as Antimicrobial Agents against Neisseria gonorrhoeae.	Kant R, Prajapati M, Das P, Kanaras AG, Saluja D, Christodoulides M, Ravi Kant C.	ACS Appl Mater Interfaces	10.1021/acsami.4c15851	2025
	Chitosan-based film incorporated with essential oil nanoemulsion foreseeing enhanced antimicrobial effect.	Elshamy S, Khadizatul K, Uemura K, Nakajima M, Neves MA.	J Food Sci Technol	10.1007/s13197-020-04888-3	2021
	Bioactive Compounds from an Endophytic Pezicula sp. Showing Antagonistic Effects against the Ash Dieback Pathogen	Demir O, Zeng H, Schulz B, Schrey H, Steinert M, Stadler M, Surup F.	Biomolecules		2023
	Chemical Composition, Phytotoxic and Antibiofilm Activity of Seven Eucalyptus Species from Tunisia.	Khedhri S, Polito F, Caputo L, Manna F, Khammassi M, Hamrouni L, Amri I, Nazzaro F, De Feo V, Fratianni F.	Molecules	10.3390/molecules27238227	2022
Stress	Biofouling on polymeric heat exchanger surfaces with E. coli and native biofilms.	Pohl S, Madzgalla M, Manz W, Bart HJ.	Biofouling	10.1080/08927014.2015.1094691	2015
	The Rare Actinobacterium Crossiella sp. Is a Potential Source of New Bioactive Compounds with Activity against Bacteria and Fungi.	Gonzalez-Pimentel JL, Dominguez-Monino I, Jurado V, Laiz L, Caldeira AT, Saiz-Jimenez C.	Microorganisms	10.3390/microorganisms10081575	2022
	High-Level Quinolone-Resistant Haemophilus haemolyticus in Pediatric Patient with No History of Quinolone Exposure.	Tanaka E, Hirai Y, Wajima T, Ishida Y, Kawamura Y, Nakaminami H.	Emerg Infect Dis	10.3201/eid2801.210248	2022
	The Effects of Freeze-Thaw and UVC Radiation on Microbial Survivability in a Selected Mars-like Environment.	Keaney D, Lucey B, Quinn N, Finn K.	Microorganisms	10.3390/microorganisms10030576	2022
	Molecular characterization of multi-drug-resistant Staphylococcus aureus in mastitis bovine milk from a dairy farm in Anhui, China.	Liu J, Wang X, Bi C, Mehmood K, Ali F, Qin J, Han Z.	Front Vet Sci	10.3389/fvets.2022.966533	2022
	Postbiotics: an insightful review of the latest category in functional biotics.	Amobonye A, Pillay B, Hlope F, Asong ST, Pillai S.	World J Microbiol Biotechnol	10.1007/s11274-025-04483-8	2025
Genetics	Enterococcus burkinafasonensis sp. nov. isolated from human gut microbiota.	Gouba N, Yimagou EK, Hassani Y, Drancourt M, Fellag M, Mbogning Fonkou MD.	New Microbes New Infect	10.1016/j.nmni.2020.100702	2020
Enzymology	Cold atmospheric plasma: a sustainable approach to inactivating viruses, bacteria, and protozoa with remediation of organic pollutants in river water and wastewater.	Hamza IA, El-Kalliny AS, Abd-Elmaksoud S, Marouf MA, Abdel-Wahed MS, El-Liethy MA, Hefny MM.	Environ Sci Pollut Res Int	10.1007/s11356-023-30298-x	2023
	Accelerated Bioconversion of Chemically Solubilized Lignite Solution to Methane by Methanogenic Consortium: Experimental Results and Their Application to the Subsurface Cultivation and Gasification Method.	Ueno A, Tamazawa S, Tamamura S, Murakami T, Kiyama T, Inomata H, Aramaki N, Yoshida K, Yamaguchi S, Aoyama H, Naganuma T, Igarashi T.	Microorganisms	10.3390/microorganisms10101984	2022
	Zinc solubilizing bacteria and their potential as bioinoculant for growth promotion of green soybean (Glycine max L. Merr.).	Srithaworn M, Jaroenthanyakorn J, Tangjitjaroenkun J, Suriyachadkun C, Chunhachart O.	PeerJ	10.7717/peerj.15128	2023
	Lactic Acid Bacteria from Gamecock and Goat Originating from Phitsanulok, Thailand: Isolation, Identification, Technological Properties and Probiotic Potential.	Hwanhlem N, Salaipeth L, Charoensook R, Kanjan P, Maneerat S.	J Microbiol Biotechnol	10.4014/jmb.2110.10040	2022
	Exploring the Antibiotic Production Potential of Heterotrophic Bacterial Communities Isolated from the Marine Sponges Crateromorpha meyeri, Pseudaxinella reticulata, Farrea similaris, and Caulophacus arcticus through Synergistic Metabolomic and Genomic Analyses.	Tareen S, Schupp PJ, Iqbal N, Wink J.	Mar Drugs	10.3390/md20070463	2022
Metabolism	Chemical Composition and Phytotoxic and Antibiofilm Activity of the Essential Oils of Eucalyptus bicostata, E. gigantea, E. intertexta, E. obliqua, E. pauciflora and E. tereticornis.	Polito F, Kouki H, Khedhri S, Hamrouni L, Mabrouk Y, Amri I, Nazzaro F, Fratianni F, De Feo V.	Plants (Basel)	10.3390/plants11223017	2022
	Automatic, fast, hierarchical, and non-overlapping gating of flow cytometric data with flowEMMi v2.	Bruckmann C, Muller S, Honer Zu Siederdissen C.	Comput Struct Biotechnol J	10.1016/j.csbj.2022.11.033	2022
	Exploring nutrient limitation for polyhydroxyalkanoates synthesis by newly isolated strains of Aeromonas sp. using biodiesel-derived glycerol as a substrate.	Mozejko-Ciesielska J, Pokoj T.	PeerJ	10.7717/peerj.5838	2018
	Intestinal alpha-Defensins Play a Minor Role in Modulating the Small Intestinal Microbiota Composition as Compared to Diet.	Puertolas-Balint F, Schroeder BO.	Microbiol Spectr	10.1128/spectrum.00567-23	2023
	Novel Biodegradable Nanoparticulate Chain-End Functionalized Polyhydroxybutyrate-Caffeic Acid with Multifunctionalities for Active Food Coatings.	Abdelmalek F, Rofeal M, Pietrasik J, Steinbuchel A.	ACS Sustain Chem Eng	10.1021/acssuschemeng.3c00389	2023
	Non-thermal atmospheric pressure plasma: Screening for gentle process conditions and antibacterial efficiency on perishable fresh produce	Baier M, Gorgen M, Ehlbeck J, Knorr D, Herppich WB, Schluter O.	Innovative food science & emerging technologies : IFSET : the official scientific journal of the European Federation of Food Science and Technology.	10.1016/j.ifset.2014.01.011	2014
Enzymology	Quantitative PCR provides a simple and accessible method for quantitative microbiota profiling.	Jian C, Luukkonen P, Yki-Jarvinen H, Salonen A, Korpela K.	PLoS One	10.1371/journal.pone.0227285	2020
	Potential Probiotic Enterococcus faecium OV3-6 and Its Bioactive Peptide as Alternative Bio-Preservation.	Choeisoongnern T, Sirilun S, Waditee-Sirisattha R, Pintha K, Peerajan S, Chaiyasut C.	Foods	10.3390/foods10102264	2021
Pathogenicity	Chemical Characterization and Antibiofilm Activities of Bulbs and Leaves of Two Aglione (Allium ampeloprasum var. holmense Asch. et Graebn.) Landraces Grown in Southern Italy.	Caputo L, Amato G, Fratianni F, Coppola R, Candido V, De Feo V, Nazzaro F.	Molecules	10.3390/molecules25235486	2020
	Phenolic Compound Analysis and Pharmacological Screening of Vitex agnus-castus Functional Parts.	Berrani A, Marmouzi I, Bouyahya A, Kharbach M, El Hamdani M, El Jemli M, Lrhorfi A, Zouarhi M, Faouzi MEA, Bengueddour R.	Biomed Res Int	10.1155/2021/6695311	2021
Phylogeny	A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples.	Deng L, Silins R, Castro-Mejia JL, Kot W, Jessen L, Thorsen J, Shah S, Stokholm J, Bisgaard H, Moineau S, Nielsen DS.	Viruses	10.3390/v11070667	2019
	Bioactivity and Metabolome Mining of Deep-Sea Sediment-Derived Microorganisms Reveal New Hybrid PKS-NRPS Macrolactone from Aspergillus versicolor PS108-62.	Magot F, Van Soen G, Buedenbender L, Li F, Soltwedel T, Grauso L, Mangoni A, Blumel M, Tasdemir D.	Mar Drugs	10.3390/md21020095	2023
	Probiotics as a Possible Strategy for the Prevention and Treatment of Allergies. A Narrative Review.	Lopez-Santamarina A, Gonzalez EG, Lamas A, Mondragon ADC, Regal P, Miranda JM.	Foods	10.3390/foods10040701	2021
Pathogenicity	Safety and efficacy of a feed additive consisting of zearalenone hydrolase produced by Escherichia coli DSM 32731 for all terrestrial animal species (Biomin GmbH).	EFSA Panel on Additives, Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Dusemund B, Fasmon Durjava M, Kouba M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Ramos F, Sanz Y, Villa RE, Woutersen R, Bories G, Glandorf B, Svensson K, Anguita M, Brozzi R, Galobart J, Gregoretti L, Innocenti ML, Pettenati E, Pizzo F, Tarres-Call J, Vettori MV, Lopez-Galvez G.	EFSA J	10.2903/j.efsa.2022.7157	2022
Pathogenicity	Polyphenols, Antioxidant, Antibacterial, and Biofilm Inhibitory Activities of Peel and Pulp of Citrus medica L., Citrus bergamia, and Citrus medica cv. Salò Cultivated in Southern Italy.	Fratianni F, Cozzolino A, De Feo V, Coppola R, Ombra MN, Nazzaro F.	Molecules	10.3390/molecules24244577	2019
	Probing and Manipulating the Lateral Pressure Profile in Lipid Bilayers Using Membrane-Active Peptides-A Solid-State ¹⁹F NMR Study.	Grage SL, Afonin S, Ieronimo M, Berditsch M, Wadhwani P, Ulrich AS.	Int J Mol Sci	10.3390/ijms23094544	2022
	Simplicilones A and B Isolated from the Endophytic Fungus Simplicillium subtropicum SPC3.	Anoumedem EGM, Mountessou BYG, Kouam SF, Narmani A, Surup F.	Antibiotics (Basel)	10.3390/antibiotics9110753	2020
	Corallococcus soli sp. Nov., a Soil Myxobacterium Isolated from Subtropical Climate, Chalus County, Iran, and Its Potential to Produce Secondary Metabolites.	Babadi ZK, Garcia R, Ebrahimipour GH, Risdian C, Kampfer P, Jarek M, Muller R, Wink J.	Microorganisms	10.3390/microorganisms10071262	2022
Phylogeny	In Situ Profiling of the Three Dominant Phyla Within the Human Gut Using TaqMan PCR for Pre-Hospital Diagnosis of Gut Dysbiosis.	Jo YJ, Tagele SB, Pham HQ, Jung Y, Ibal JC, Choi S, Kang GU, Park S, Kang Y, Kim S, Koh H, Shin JH.	Int J Mol Sci	10.3390/ijms21061916	2020
	Five Tetramic Acid Derivatives Isolated from the Iranian Fungus Colpoma quercinum CCTU A372.	Primahana G, Narmani A, Surup F, Teponno RB, Arzanlou M, Stadler M.	Biomolecules	10.3390/biom11060783	2021
	Angucycline-like Aromatic Polyketide from a Novel Streptomyces Species Reveals Freshwater Snail Physa acuta as Underexplored Reservoir for Antibiotic-Producing Actinomycetes.	Safaei N, Mast Y, Steinert M, Huber K, Bunk B, Wink J.	Antibiotics (Basel)	10.3390/antibiotics10010022	2020
	Synthesis, antibacterial and antifungal activities of bifonazole derivatives.	El Hage S, Lajoie B, Feuillolay C, Roques C, Baziard G.	Arch Pharm (Weinheim)	10.1002/ardp.201000304	2011
	Polyphenols Content and In Vitro alpha-Glycosidase Activity of Different Italian Monofloral Honeys, and Their Effect on Selected Pathogenic and Probiotic Bacteria.	Fratianni F, Ombra MN, d'Acierno A, Caputo L, Amato G, De Feo V, Coppola R, Nazzaro F.	Microorganisms	10.3390/microorganisms9081694	2021
Enzymology	Virulence Analysis of Bacillus cereus Isolated after Death of Preterm Neonates, Nice, France, 2013.	Lotte R, Herisse AL, Berrouane Y, Lotte L, Casagrande F, Landraud L, Herbin S, Ramarao N, Boyer L, Ruimy R.	Emerg Infect Dis	10.3201/eid2305.161788	2017
	Gut and Gill-Associated Microbiota of the Flatfish European Plaice (Pleuronectes platessa): Diversity, Metabolome and Bioactivity against Human and Aquaculture Pathogens.	Ghotbi M, Kelting O, Blumel M, Tasdemir D.	Mar Drugs	10.3390/md20090573	2022
Pathogenicity	Comparison of the effectiveness of acidified sodium chlorite and sodium hypochlorite in reducing Escherichia coli.	Elano RR, Kitagawa T, Bari ML, Kawasaki S, Kawamoto S, Inatsu Y.	Foodborne Pathog Dis	10.1089/fpd.2010.0595	2010
	Overcoming donor variability and risks associated with fecal microbiota transplants through bacteriophage-mediated treatments.	Rasmussen TS, Mao X, Forster S, Larsen SB, Von Munchow A, Tranaes KD, Brunse A, Larsen F, Mejia JLC, Adamberg S, Hansen AK, Adamberg K, Hansen CHF, Nielsen DS.	Microbiome	10.1186/s40168-024-01820-1	2024
	Revealing proteome-level functional redundancy in the human gut microbiome using ultra-deep metaproteomics.	Li L, Wang T, Ning Z, Zhang X, Butcher J, Serrana JM, Simopoulos CMA, Mayne J, Stintzi A, Mack DR, Liu YY, Figeys D.	Nat Commun	10.1038/s41467-023-39149-2	2023
	Safety of l-tryptophan technically pure, produced by fermentation with Escherichia coli DSM 25084, KCCM 11132P and SARI12091203 for all animal species based on a dossier submitted by FEFANA Asbl.	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Rychen G, Aquilina G, Azimonti G, Bampidis V, Bastos ML, Bories G, Chesson A, Cocconcelli PS, Flachowsky G, Gropp J, Kolar B, Kouba M, Lopez-Alonso M, Lopez Puente S, Mantovani A, Mayo B, Ramos F, Saarela M, Villa RE, Wester P, Costa LG, Dierick N, Wallace RJ.	EFSA J	10.2903/j.efsa.2017.4712	2017
Enzymology	Whole-genome sequencing of two Streptomyces strains isolated from the sand dunes of Sahara.	Zerouki C, Bensalah F, Kuittinen S, Pappinen A, Turunen O.	BMC Genomics	10.1186/s12864-021-07866-x	2021
Enzymology	An epoxide hydrolase from endophytic Streptomyces shows unique structural features and wide biocatalytic activity.	Tormet-Gonzalez GD, Wilson C, de Oliveira GS, Dos Santos JC, de Oliveira LG, Dias MVB.	Acta Crystallogr D Struct Biol	10.1107/s2059798320010402	2020
Pathogenicity	Antimicrobial activity of organic acids against Campylobacter spp. and development of combinations-A synergistic effect?	Peh E, Kittler S, Reich F, Kehrenberg C.	PLoS One	10.1371/journal.pone.0239312	2020
Enzymology	Direct Identification of 80 Percent of Bacteria from Blood Culture Bottles by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Using a 10-Minute Extraction Protocol.	Simon L, Ughetto E, Gaudart A, Degand N, Lotte R, Ruimy R.	J Clin Microbiol	10.1128/jcm.01278-18	2019
Phylogeny	Different Secondary Metabolite Profiles of Phylogenetically almost Identical Streptomyces griseus Strains Originating from Geographically Remote Locations.	Sottorff I, Wiese J, Lipfert M, Preusske N, Sonnichsen FD, Imhoff JF.	Microorganisms	10.3390/microorganisms7060166	2019
	Bacteria Delay the Jamming of Particles at Microchannel Bottlenecks.	Sendekie ZB, Gaveau A, Lammertink RG, Bacchin P.	Sci Rep	10.1038/srep31471	2016
	beta-Lytic Protease of Lysobacter capsici VKM B-2533^T.	Afoshin AS, Konstantinov MA, Toropygin IY, Kudryakova IV, Vasilyeva NV.	Antibiotics (Basel)	10.3390/antibiotics9110744	2020
Phylogeny	Isolation, characterization, and effect of phosphate-zinc-solubilizing bacterial strains on chickpea (Cicer arietinum L.) growth.	Zaheer A, Malik A, Sher A, Mansoor Qaisrani M, Mehmood A, Ullah Khan S, Ashraf M, Mirza Z, Karim S, Rasool M.	Saudi J Biol Sci	10.1016/j.sjbs.2019.04.004	2019
	Preliminary Evaluation of the Safety and Probiotic Potential of Akkermansia muciniphila DSM 22959 in Comparison with Lactobacillus rhamnosus GG.	Cozzolino A, Vergalito F, Tremonte P, Iorizzo M, Lombardi SJ, Sorrentino E, Luongo D, Coppola R, Di Marco R, Succi M.	Microorganisms	10.3390/microorganisms8020189	2020
Pathogenicity	Oxidative modification and electrochemical inactivation of Escherichia coli upon cold atmospheric pressure plasma exposure.	Dezest M, Bulteau AL, Quinton D, Chavatte L, Le Bechec M, Cambus JP, Arbault S, Negre-Salvayre A, Clement F, Cousty S.	PLoS One	10.1371/journal.pone.0173618	2017
	Steroid-Functionalized Imidazolium Salts with an Extended Spectrum of Antifungal and Antibacterial Activity.	Malinowska M, Sawicka D, Niemirowicz-Laskowska K, Wielgat P, Car H, Hauschild T, Hryniewicka A.	Int J Mol Sci	10.3390/ijms222212180	2021
	Chip calorimetry for the monitoring of whole cell biotransformation.	Maskow T, Lerchner J, Peitzsch M, Harms H, Wolf G.	J Biotechnol	10.1016/j.jbiotec.2005.10.008	2006
Pathogenicity	Chemical Composition and in Vitro Antimicrobial, Cytotoxic, and Central Nervous System Activities of the Essential Oils of Citrus medica L. cv. 'Liscia' and C. medica cv. 'Rugosa' Cultivated in Southern Italy.	Aliberti L, Caputo L, De Feo V, De Martino L, Nazzaro F, Souza LF.	Molecules	10.3390/molecules21091244	2016
Phylogeny	Age-related changes in gut microbiota composition from newborn to centenarian: a cross-sectional study.	Odamaki T, Kato K, Sugahara H, Hashikura N, Takahashi S, Xiao JZ, Abe F, Osawa R.	BMC Microbiol	10.1186/s12866-016-0708-5	2016
Pathogenicity	Antimicrobial potential of 27 plants consumed by chimpanzees (Pan troglodytes verus Blumenbach) in Ivory Coast.	Ahoua AR, Konan AG, Bonfoh B, Kone MW.	BMC Complement Altern Med	10.1186/s12906-015-0918-7	2015
Metabolism	Fermentability of a Novel Galacto-Oligosaccharide Mixture by Lactobacillus spp. and Bifidobacterium spp.	Kittibunchakul S, Maischberger T, Domig KJ, Kneifel W, Nguyen HM, Haltrich D, Nguyen TH.	Molecules	10.3390/molecules23123352	2018
	Chemical composition and biological activity of the essential oil from leaves of Moringa oleifera Lam. cultivated in Mozambique.	Marrufo T, Nazzaro F, Mancini E, Fratianni F, Coppola R, De Martino L, Agostinho AB, De Feo V.	Molecules	10.3390/molecules180910989	2013
Pathogenicity	Efficacy of some neutralizers in suspension tests determining the activity of disinfectants.	Espigares E, Bueno A, Fernandez-Crehuet M, Espigares M.	J Hosp Infect	10.1016/s0195-6701(03)00238-x	2003
Pathogenicity	Enteric bacterial pathogens in children with diarrhea in Niger: diversity and antimicrobial resistance.	Langendorf C, Le Hello S, Moumouni A, Gouali M, Mamaty AA, Grais RF, Weill FX, Page AL.	PLoS One	10.1371/journal.pone.0120275	2015
	Hexose Oxidase-Mediated Hydrogen Peroxide as a Mechanism for the Antibacterial Activity in the Red Seaweed Ptilophora subcostata.	Ogasawara K, Yamada K, Hatsugai N, Imada C, Nishimura M.	PLoS One	10.1371/journal.pone.0149084	2016
	Determination of Antibacterial and Technological Properties of Vaginal Lactobacilli for Their Potential Application in Dairy Products.	Siroli L, Patrignani F, Serrazanetti DI, Parolin C, Nahui Palomino RA, Vitali B, Lanciotti R.	Front Microbiol	10.3389/fmicb.2017.00166	2017
	The seventh pandemic of cholera in Europe revisited by microbial genomics.	Oprea M, Njamkepo E, Cristea D, Zhukova A, Clark CG, Kravetz AN, Monakhova E, Ciontea AS, Cojocaru R, Rauzier J, Damian M, Gascuel O, Quilici ML, Weill FX.	Nat Commun	10.1038/s41467-020-19185-y	2020
	flowEMMi: an automated model-based clustering tool for microbial cytometric data.	Ludwig J, Zu Siederdissen CH, Liu Z, Stadler PF, Muller S.	BMC Bioinformatics	10.1186/s12859-019-3152-3	2019
	Underestimated Survival of Campylobacter in Raw Milk Highlighted by Viability Real-Time PCR and Growth Recovery.	Wulsten IF, Galeev A, Stingl K.	Front Microbiol	10.3389/fmicb.2020.01107	2020
	Outbreak of Extended-Spectrum Beta-Lactamase Producing Enterobacter cloacae with High MICs of Quaternary Ammonium Compounds in a Hematology Ward Associated with Contaminated Sinks.	Chapuis A, Amoureux L, Bador J, Gavalas A, Siebor E, Chretien ML, Caillot D, Janin M, de Curraize C, Neuwirth C.	Front Microbiol	10.3389/fmicb.2016.01070	2016
	Combined effects of hydrostatic pressure, temperature, and the addition of allyl isothiocyanate on inactivation of Escherichia coli.	Ogawa T, Nakatani A, Matsuzaki H, Isobe S, Isshiki K.	J Food Prot	10.4315/0362-028x-63.7.884	2000
Genetics	Genomic insights into the 2016-2017 cholera epidemic in Yemen.	Weill FX, Domman D, Njamkepo E, Almesbahi AA, Naji M, Nasher SS, Rakesh A, Assiri AM, Sharma NC, Kariuki S, Pourshafie MR, Rauzier J, Abubakar A, Carter JY, Wamala JF, Seguin C, Bouchier C, Malliavin T, Bakhshi B, Abulmaali HHN, Kumar D, Njoroge SM, Malik MR, Kiiru J, Luquero FJ, Azman AS, Ramamurthy T, Thomson NR, Quilici ML.	Nature	10.1038/s41586-018-0818-3	2019
	Essential-Oil-Loaded Nanoemulsion Lipidic-Phase Optimization and Modeling by Response Surface Methodology (RSM): Enhancement of Their Antimicrobial Potential and Bioavailability in Nanoscale Food Delivery System.	Yakoubi S, Kobayashi I, Uemura K, Nakajima M, Isoda H, Ksouri R, Saidani-Tounsi M, Neves MA.	Foods	10.3390/foods10123149	2021
Enzymology	Immunogold Nanoparticles for Rapid Plasmonic Detection of C. sakazakii.	Aly MA, Domig KJ, Kneifel W, Reimhult E.	Sensors (Basel)	10.3390/s18072028	2018
Metabolism	Eruca sativa might influence the growth, survival under simulated gastrointestinal conditions and some biological features of Lactobacillus acidophilus, Lactobacillus plantarum and Lactobacillus rhamnosus strains.	Fratianni F, Pepe S, Cardinale F, Granese T, Cozzolino A, Coppola R, Nazzaro F.	Int J Mol Sci	10.3390/ijms151017790	2014
Metabolism	Effect of Rocket (Eruca sativa) Extract on MRSA Growth and Proteome: Metabolic Adjustments in Plant-Based Media.	Doulgeraki AI, Efthimiou G, Paramithiotis S, Pappas KM, Typas MA, Nychas GJ.	Front Microbiol	10.3389/fmicb.2017.00782	2017
Biotechnology	Simultaneous quantification of multiple food- and waterborne pathogens by use of microfluidic quantitative PCR.	Ishii S, Segawa T, Okabe S.	Appl Environ Microbiol	10.1128/aem.00205-13	2013
Phylogeny	Noncontiguous finished genome sequence and description of Intestinimonas massiliensis sp. nov strain GD2^T , the second Intestinimonas species cultured from the human gut.	Afouda P, Durand GA, Lagier JC, Labas N, Cadoret F, Armstrong N, Raoult D, Dubourg G.	Microbiologyopen	10.1002/mbo3.621	2019
	Resistance of Escherichia coli growing as biofilms to disinfectants.	Ntsama-Essomba C, Bouttier S, Ramaldes M, Dubois-Brissonnet F, Fourniat J.	Vet Res		1997
Metabolism	Bile acids drive the newborn's gut microbiota maturation.	van Best N, Rolle-Kampczyk U, Schaap FG, Basic M, Olde Damink SWM, Bleich A, Savelkoul PHM, von Bergen M, Penders J, Hornef MW.	Nat Commun	10.1038/s41467-020-17183-8	2020
Metabolism	The gut bacterium Extibacter muris produces secondary bile acids and influences liver physiology in gnotobiotic mice.	Streidl T, Karkossa I, Segura Munoz RR, Eberl C, Zaufel A, Plagge J, Schmaltz R, Schubert K, Basic M, Schneider KM, Afify M, Trautwein C, Tolba R, Stecher B, Doden HL, Ridlon JM, Ecker J, Moustafa T, von Bergen M, Ramer-Tait AE, Clavel T.	Gut Microbes	10.1080/19490976.2020.1854008	2021
	Acrolein contributes strongly to antimicrobial and heterocyclic amine transformation activities of reuterin.	Engels C, Schwab C, Zhang J, Stevens MJ, Bieri C, Ebert MO, McNeill K, Sturla SJ, Lacroix C.	Sci Rep	10.1038/srep36246	2016
Metabolism	Antibacterial activity of some lactic acid bacteria isolated from an Algerian dairy product.	Mezaini A, Chihib NE, Bouras AD, Nedjar-Arroume N, Hornez JP.	J Environ Public Health	10.1155/2009/678495	2009
	In vitro and in vivo properties differ among liquid intravenous immunoglobulin preparations.	Dhainaut F, Guillaumat PO, Dib H, Perret G, Sauger A, de Coupade C, Beaudet M, Elzaabi M, Mouthon L.	Vox Sang	10.1111/j.1423-0410.2012.01648.x	2013
	Biotechnological screening of microalgal and cyanobacterial strains for biogas production and antibacterial and antifungal effects.	Mudimu O, Rybalka N, Bauersachs T, Born J, Friedl T, Schulz R.	Metabolites	10.3390/metabo4020373	2014
Metabolism	Comparative analysis and limitations of ethidium monoazide and propidium monoazide treatments for the differentiation of viable and nonviable campylobacter cells.	Seinige D, Krischek C, Klein G, Kehrenberg C.	Appl Environ Microbiol	10.1128/aem.03962-13	2014
Pathogenicity	Directing Drugs to Bugs: Antibiotic-Carbohydrate Conjugates Targeting Biofilm-Associated Lectins of Pseudomonas aeruginosa.	Meiers J, Zahorska E, Rohrig T, Hauck D, Wagner S, Titz A.	J Med Chem	10.1021/acs.jmedchem.0c00856	2020
Metabolism	Comparative evaluation of a prototype chromogenic medium (ChromID CARBA) for detecting carbapenemase-producing Enterobacteriaceae in surveillance rectal swabs.	Vrioni G, Daniil I, Voulgari E, Ranellou K, Koumaki V, Ghirardi S, Kimouli M, Zambardi G, Tsakris A.	J Clin Microbiol	10.1128/jcm.06848-11	2012
	Screening Togolese medicinal plants for few pharmacological properties.	Karou SD, Tchacondo T, Tchibozo MA, Anani K, Ouattara L, Simpore J, de Souza C.	Pharmacognosy Res	10.4103/0974-8490.94737	2012
	Influence of long time storage in mineral water on RNA stability of Pseudomonas aeruginosa and Escherichia coli after heat inactivation.	Cenciarini C, Courtois S, Raoult D, La Scola B.	PLoS One	10.1371/journal.pone.0003443	2008
Biotechnology	Development of a loop-mediated isothermal amplification assay for sensitive and rapid detection of Vibrio parahaemolyticus.	Yamazaki W, Ishibashi M, Kawahara R, Inoue K.	BMC Microbiol	10.1186/1471-2180-8-163	2008
	Evaluation of antimicrobial interactions between chlorhexidine, quaternary ammonium compounds, preservatives and excipients.	Pons JL, Bonnaveiro N, Chevalier J, Cremieux A.	J Appl Bacteriol	10.1111/j.1365-2672.1992.tb04994.x	1992
	MiL-FISH: Multilabeled Oligonucleotides for Fluorescence In Situ Hybridization Improve Visualization of Bacterial Cells.	Schimak MP, Kleiner M, Wetzel S, Liebeke M, Dubilier N, Fuchs BM.	Appl Environ Microbiol	10.1128/aem.02776-15	2016
Phylogeny	Characterization of atypical isolates of Yersinia intermedia and definition of two new biotypes.	Martin L, Leclercq A, Savin C, Carniel E.	J Clin Microbiol	10.1128/jcm.02512-08	2009
Pathogenicity	Composition and antimicrobial activities of Lippia multiflora Moldenke, Mentha x piperita L. and Ocimum basilicum L. essential oils and their major monoterpene alcohols alone and in combination.	Bassole IH, Lamien-Meda A, Bayala B, Tirogo S, Franz C, Novak J, Nebie RC, Dicko MH.	Molecules	10.3390/molecules15117825	2010
Biotechnology	Microbial diagnostic microarray for food- and water-borne pathogens.	Kostic T, Stessl B, Wagner M, Sessitsch A, Bodrossy L.	Microb Biotechnol	10.1111/j.1751-7915.2010.00176.x	2010
Phylogeny	Rapid identification and quantification of Campylobacter coli and Campylobacter jejuni by real-time PCR in pure cultures and in complex samples.	Leblanc-Maridor M, Beaudeau F, Seegers H, Denis M, Belloc C.	BMC Microbiol	10.1186/1471-2180-11-113	2011
Pathogenicity	Evaluation of antibiotic susceptibilities of Ehrlichia canis, Ehrlichia chaffeensis, and Anaplasma phagocytophilum by real-time PCR.	Branger S, Rolain JM, Raoult D.	Antimicrob Agents Chemother	10.1128/aac.48.12.4822-4828.2004	2004
Phylogeny	Microbiological and epidemiological features of clinical respiratory isolates of Burkholderia gladioli.	Segonds C, Clavel-Batut P, Thouverez M, Grenet D, Le Coustumier A, Plesiat P, Chabanon G.	J Clin Microbiol	10.1128/jcm.02489-08	2009
Metabolism	Specific humoral immune response to the Thomsen-Friedenreich tumor antigen (CD176) in mice after vaccination with the commensal bacterium Bacteroides ovatus D-6.	Ulsemer P, Henderson G, Toutounian K, Loffler A, Schmidt J, Karsten U, Blaut M, Goletz S.	Cancer Immunol Immunother	10.1007/s00262-013-1394-x	2013
Enzymology	Photometric application of the Gram stain method to characterize natural bacterial populations in aquatic environments.	Saida H, Ytow N, Seki H.	Appl Environ Microbiol	10.1128/aem.64.2.742-747.1998	1998
	Preliminary safety evaluation of a new Bacteroides xylanisolvens isolate.	Ulsemer P, Toutounian K, Schmidt J, Karsten U, Goletz S.	Appl Environ Microbiol	10.1128/aem.06641-11	2012
	Bacteroides ovatus as the predominant commensal intestinal microbe causing a systemic antibody response in inflammatory bowel disease.	Saitoh S, Noda S, Aiba Y, Takagi A, Sakamoto M, Benno Y, Koga Y.	Clin Diagn Lab Immunol	10.1128/cdli.9.1.54-59.2002	2002
	Chemical composition and in vitro antimicrobial and mutagenic activities of seven Lamiaceae essential oils.	De Martino L, De Feo V, Nazzaro F.	Molecules	10.3390/molecules14104213	2009
Genetics	Plastic architecture of bacterial genome revealed by comparative genomics of Photorhabdus variants.	Gaudriault S, Pages S, Lanois A, Laroui C, Teyssier C, Jumas-Bilak E, Givaudan A.	Genome Biol	10.1186/gb-2008-9-7-r117	2008
	Detection and characterization of plasmid pJP4 transfer to indigenous soil bacteria.	Newby DT, Josephson KL, Pepper IL.	Appl Environ Microbiol	10.1128/aem.66.1.290-296.2000	2000
	Residue-specific bioincorporation of non-natural, biologically active amino acids into proteins as possible drug carriers: structure and stability of the per-thiaproline mutant of annexin V.	Budisa N, Minks C, Medrano FJ, Lutz J, Huber R, Moroder L.	Proc Natl Acad Sci U S A	10.1073/pnas.95.2.455	1998
Phenotype	Visualization and curve-parameter estimation strategies for efficient exploration of phenotype microarray kinetics.	Vaas LA, Sikorski J, Michael V, Goker M, Klenk HP.	PLoS One	10.1371/journal.pone.0034846	2012
	Determination of bacterial cell dry mass by transmission electron microscopy and densitometric image analysis.	Loferer-Krossbacher M, Klima J, Psenner R.	Appl Environ Microbiol	10.1128/aem.64.2.688-694.1998	1998
Pathogenicity	Culture and antibiotic susceptibility of Bartonella quintana in human erythrocytes.	Rolain JM, Maurin M, Mallet MN, Parzy D, Raoult D.	Antimicrob Agents Chemother	10.1128/aac.47.2.614-619.2003	2003
Enzymology	DNA microarray-based detection and identification of fungal pathogens in clinical samples from neutropenic patients.	Spiess B, Seifarth W, Hummel M, Frank O, Fabarius A, Zheng C, Morz H, Hehlmann R, Buchheidt D.	J Clin Microbiol	10.1128/jcm.00942-07	2007
Enzymology	Simultaneous extraction from bacterioplankton of total RNA and DNA suitable for quantitative structure and function analyses.	Weinbauer MG, Fritz I, Wenderoth DF, Hofle MG.	Appl Environ Microbiol	10.1128/aem.68.3.1082-1087.2002	2002
Phylogeny	Rapid and correct identification of intestinal Bacteroides spp. with chromosomal DNA probes by whole-cell dot blot hybridization.	Morotomi M, Ohno T, Mutai M.	Appl Environ Microbiol	10.1128/aem.54.5.1158-1162.1988	1988
	Use of gas-liquid chromatography to determine the end products of growth of lactic Acid bacteria.	Thornhill PJ, Cogan TM.	Appl Environ Microbiol	10.1128/aem.47.6.1250-1254.1984	1984
	Mirabegron exhibits antibacterial and Immunomodulatory activities demonstrated by in vitro and in vivo studies.	Ahmed EA, Abd-Eldayem AM.	Sci Rep	10.1038/s41598-025-23392-2	2025
	Carbon Dots as Multifunctional Nanomaterials: A Review on Antimicrobial Activities and Fluorescence-Based Microbial Detection.	Romulo A, Suryoprabowo S, Setiarto RHB, Guo Y.	Molecules	10.3390/molecules30193969	2025
	Novel Whey Fermented Beverage Enriched with a Mixture of Juice Concentrates: Evaluation of Antimicrobial, Antioxidant, and Angiotensin I Converting Enzyme Inhibitory (ACE) Activities Before and After Simulated Gastrointestinal Digestion.	Kotsaki P, Aspri M, Papademas P.	Microorganisms	10.3390/microorganisms13071490	2025
	Antimicrobial Potential of Pomegranate and Lemon Extracts Alone or in Combination with Antibiotics against Pathogens.	Farhat G, Cheng L, Al-Dujaili EAS, Zubko M.	Int J Mol Sci	10.3390/ijms25136943	2024
	Biocompatible Carbon Dots/Polyurethane Composites as Potential Agents for Combating Bacterial Biofilms: N-Doped Carbon Quantum Dots/Polyurethane and Gamma Ray-Modified Graphene Quantum Dots/Polyurethane Composites.	Markovic Z, Dorontic S, Jovanovic S, Kovac J, Milivojevic D, Marinkovic D, Mojsin M, Todorovic Markovic B.	Pharmaceutics	10.3390/pharmaceutics16121565	2024
	Exploring the Effects of Sweet Potato Leaves on Skin Health-From Antimicrobial to Immunomodulator.	Machado M, Silva S, Pintado M, Costa EM.	Molecules	10.3390/molecules30040855	2025
	Fast Identification and Quantification of Uropathogenic E. coli through Cluster Analysis.	Vendeville JB, Kyriakides MJ, Takebayashi Y, Rama S, Preece J, Samphire J, Ramos-Soriano J, Amieva AM, Holbrow-Wilshaw ME, Gordon Newman HR, Kou SL, Medina-Villar S, Dorh N, Dorh JN, Spencer J, Galan MC.	ACS Biomater Sci Eng	10.1021/acsbiomaterials.1c00732	2022
	Antimicrobial nitric oxide releasing gelatin nanoparticles to combat drug resistant bacterial and fungal infections.	Myles E, D'Sa RA, Aveyard J.	Nanoscale Adv	10.1039/d4na01042f	2025
	Phloroglucinol-Based Carbon Quantum Dots/Polyurethane Composite Films: How Structure of Carbon Quantum Dots Affects Antibacterial and Antibiofouling Efficiency of Composite Films	Markovic Z, Milivojevic D, Kovac J, Todorovic Markovic B.	Polymers (Basel)		2024
	Multidrug-Resistant Escherichia coli Remains Susceptible to Metal Ions and Graphene-Based Compounds.	Karaky N, Tang S, Ramalingam P, Kirby A, McBain AJ, Banks CE, Whitehead KA.	Antibiotics (Basel)	10.3390/antibiotics13050381	2024
	Impact of Iron Deficiency on the Growth and Bioelectrical Profile of Different Gut Bacteria	Quarta E, Bourqqia-Ramzi M, Munoz-Rodriguez D, Garcia-Esteban M, Murciano-Cespedosa A, Mateos Gonzalez A, Conejero-Meca F, Lombardo-Hernandez J, Mansilla-Guardiola J, Baroni S, Geninatti Crich S, Geuna S, Munaron L, Chiabrando D, Herrera-Rincon C.	Microbiologyopen		2025
	Cyprus St. John's Wort, Hypericum repens L.: Major Constituents, Antioxidant, Antimicrobial, and Anticholinesterase Activities.	Charalambous D, Kakouri E, Ververis A, Zorba I, Chatzidakis D, Andreou M, Christodoulou K, Karikas GA, Tarantilis PA.	Plants (Basel)	10.3390/plants14121881	2025
	Potential Therapeutic Properties of Olea europaea Leaves from Selected Cultivars Based on Their Mineral and Organic Profiles.	de Oliveira NM, Machado J, Cheu MH, Lopes L, Barroso MF, Silva A, Sousa S, Domingues VF, Grosso C.	Pharmaceuticals (Basel)	10.3390/ph17030274	2024
	A novel ionic liquid-based approach for DNA and RNA extraction simplifies sample preparation for bacterial diagnostics.	Kreuter J, Bica-Schroder K, Palvolgyi AM, Krska R, Sommer R, Farnleitner AH, Kolm C, Reischer GH.	Anal Bioanal Chem	10.1007/s00216-024-05615-z	2024
	Investigating the Effect of Rosemary Essential Oil, Supercritical CO₂ Processing and Their Synergism on the Quality and Microbial Inactivation of Chicken Breast Meat.	Santi F, Zulli R, Lincetti E, Zambon A, Spilimbergo S.	Foods	10.3390/foods12091786	2023
	The safety and efficacy of neutral electrolyzed water solution for wound irrigation: post-market clinical follow-up study.	Valdova V, Stepanova V, Lapcikova L.	Front Drug Saf Regul	10.3389/fdsfr.2024.1402684	2024
	The Antibacterial Efficacy of Far-UVC Light: A Combined-Method Study Exploring the Effects of Experimental and Bacterial Variables on Dose-Response.	Griffin DT, Gourlay T, Maclean M.	Pathogens	10.3390/pathogens13080698	2024
	Antimicrobial activity of ZnO-Ag-MWCNTs nanocomposites prepared by a simple impregnation-calcination method.	Al-Gaashani R, Pasha M, Jabbar KA, Shetty AR, Baqiah H, Mansour S, Kochkodan V, Lawler J.	Sci Rep	10.1038/s41598-023-48831-w	2023
	Unraveling the Bioactive Potential of Camellia japonica Edible Flowers: Profiling Antioxidant Substances and In Vitro Bioactivity Assessment.	Pereira AG, Fraga-Corral M, Silva A, Barroso MF, Grosso C, Carpena M, Garcia-Perez P, Perez-Gregorio R, Cassani L, Simal-Gandara J, Prieto MA.	Pharmaceuticals (Basel)	10.3390/ph17070946	2024
	Bioconjugation of Serratiopeptidase with Titanium Oxide Nanoparticles: Improving Stability and Antibacterial Properties.	Melchor-Moncada JJ, Vasquez-Giraldo S, Zuluaga-Velez A, Orozco LM, Veloza LA, Sepulveda-Arias JC.	J Funct Biomater	10.3390/jfb15100300	2024
	The Parameters Affecting Antimicrobial Efficiency of Antimicrobial Blue Light Therapy: A Review and Prospect.	Huang S, Lin S, Qin H, Jiang H, Liu M.	Biomedicines	10.3390/biomedicines11041197	2023
	Antibacterial and Antibiofouling Activities of Carbon Polymerized Dots/Polyurethane and C₆₀/Polyurethane Composite Films.	Markovic ZM, Budimir Filimonovic MD, Milivojevic DD, Kovac J, Todorovic Markovic BM.	J Funct Biomater	10.3390/jfb15030073	2024
	From the Microbiome to the Electrome: Implications for the Microbiota-Gut-Brain Axis.	Bourqqia-Ramzi M, Mansilla-Guardiola J, Munoz-Rodriguez D, Quarta E, Lombardo-Hernandez J, Murciano-Cespedosa A, Conejero-Meca FJ, Mateos Gonzalez A, Geuna S, Garcia-Esteban MT, Herrera-Rincon C.	Int J Mol Sci	10.3390/ijms25116233	2024
	Bifidobacterium longum subsp. infantis CECT 7210 Reduces Inflammatory Cytokine Secretion in Caco-2 Cells Cultured in the Presence of Escherichia coli CECT 515.	Alvarez-Mercado AI, Plaza-Diaz J, de Almagro MC, Gil A, Moreno-Munoz JA, Fontana L.	Int J Mol Sci	10.3390/ijms231810813	2022
	Multilayer Electrospun Scaffolds of Opposite-Charged Chitosans.	Balducci C, Roso M, Zamuner A, Falcigno L, D'Auria G, Brun P, Dettin M.	Int J Mol Sci	10.3390/ijms25063256	2024
	DNA sequencing at the picogram level to investigate life on Mars and Earth.	Basapathi Raghavendra J, Zorzano MP, Kumaresan D, Martin-Torres J.	Sci Rep	10.1038/s41598-023-42170-6	2023
	DNA aptamers against bacterial cells can be efficiently selected by a SELEX process using state-of-the art qPCR and ultra-deep sequencing.	Kolm C, Cervenka I, Aschl UJ, Baumann N, Jakwerth S, Krska R, Mach RL, Sommer R, DeRosa MC, Kirschner AKT, Farnleitner AH, Reischer GH.	Sci Rep	10.1038/s41598-020-77221-9	2020
	Laboratory evaluation of the broad-spectrum antibacterial efficacy of a low-irradiance visible 405-nm light system for surface-simulated decontamination.	Sinclair LG, Dougall LR, Ilieva Z, McKenzie K, Anderson JG, MacGregor SJ, Maclean M.	Health Technol (Berl)	10.1007/s12553-023-00761-3	2023
	Nutritional and Functional Properties of Terminalia ferdinandiana Fruits Wild Harvested from Western Australia.	Bobasa EM, Phan ADT, Netzel ME, Akter S, Cozzolino D, Sultanbawa Y.	Foods	10.3390/foods13182888	2024
	Point-of-Care Lateral Flow Detection of Viable Escherichia coli O157:H7 Using an Improved Propidium Monoazide-Recombinase Polymerase Amplification Method.	Rani A, Dike CC, Mantri N, Ball A.	Foods	10.3390/foods11203207	2022
	Treatment of Ready-To-Eat Cooked Meat Products with Cold Atmospheric Plasma to Inactivate Listeria and Escherichia coli.	Csadek I, Vankat U, Schrei J, Graf M, Bauer S, Pilz B, Schwaiger K, Smulders FJM, Paulsen P.	Foods	10.3390/foods12040685	2023
	Exploring the Nutritional Value and Health Benefits of Honey from the Portuguese Protected Area of Montesinho Natural Park.	Grosso C, Soares S, Silva A, Soares C, Moreira MM, Dorosh O, Barroso MF, Prieto MA, Delerue-Matos C.	Foods	10.3390/foods14060963	2025
	Drivers of Antibiotic Resistance Gene Abundance in an Urban River.	Morina JC, Franklin RB.	Antibiotics (Basel)	10.3390/antibiotics12081270	2023
	Optimization and Bioactive Evaluation of Bifurcaria bifurcata Antioxidant-Rich Extracts for Functional Food and Pharmaceutical Applications.	Silva A, Carpena M, Cassani L, Grosso C, Garcia-Oliveira P, Delerue-Matos C, Simal-Gandara J, Barroso MF, Prieto MA.	Antioxidants (Basel)	10.3390/antiox13101189	2024
Phylogeny	Mucin-degrading gut commensals isolated from healthy faecal donor suppress intestinal epithelial inflammation and regulate tight junction barrier function.	Pan M, Barua N, Ip M.	Front Immunol	10.3389/fimmu.2022.1021094	2022
	Exploring the Potential of Invasive Species Sargassum muticum: Microwave-Assisted Extraction Optimization and Bioactivity Profiling.	Silva A, Cassani L, Carpena M, Lourenco-Lopes C, Grosso C, Chamorro F, Garcia-Perez P, Carvalho A, Domingues VF, Barroso MF, Simal-Gandara J, Prieto MA.	Mar Drugs	10.3390/md22080352	2024
	Synthesis and mechanism-of-action of a novel synthetic antibiotic based on a dendritic system with bow-tie topology.	Revilla-Guarinos A, Popp PF, Durr F, Lozano-Cruz T, Hartig J, de la Mata FJ, Gomez R, Mascher T.	Front Microbiol	10.3389/fmicb.2022.912536	2022
	From an Hsp90 - binding protein to a peptide drug.	Ammanath AV, Jarneborn A, Nguyen MT, Wessling L, Tribelli P, Nega M, Beck C, Luqman A, Selim KA, Kalbacher H, Macek B, Hammer SB, Jin T, Gotz F.	Microlife	10.1093/femsml/uqac023	2023
	Evaluation of alternative methods of tunnel composting (submitted by the European Composting Network) II.	EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis K, Allende A, Bolton D, Bover-Cid S, Chemaly M, Herman L, Hilbert F, Lindqvist R, Nauta M, Nonno R, Peixe L, Skandamis P, Ru G, Simmons M, De Cesare A, Escamez PF, Suffredini E, Ortiz-Pelaez A, Ordonez AA.	EFSA J	10.2903/j.efsa.2024.8745	2024
	Modular 3D-Printed Peg Biofilm Device for Flexible Setup of Surface-Related Biofilm Studies.	Zaborskyte G, Wistrand-Yuen E, Hjort K, Andersson DI, Sandegren L.	Front Cell Infect Microbiol	10.3389/fcimb.2021.802303	2021
Biotechnology	The Influence of Surface Topography and Wettability on Escherichia coli Removal from Polymeric Materials in the Presence of a Blood Conditioning Film.	Akhidime ID, Slate AJ, Hulme A, Whitehead KA.	Int J Environ Res Public Health	10.3390/ijerph17207368	2020
	Anticonjugation and Antibiofilm Evaluation of Probiotic Strains Lactobacillus plantarum 22F, 25F, and Pediococcus acidilactici 72N Against Escherichia coli Harboring mcr-1 Gene.	Apiwatsiri P, Pupa P, Yindee J, Niyomtham W, Sirichokchatchawan W, Lugsomya K, Shah AA, Prapasarakul N.	Front Vet Sci	10.3389/fvets.2021.614439	2021
	Antibacterial activity of novel peptide derived from Cry1Ab16 toxin and development of LbL films for foodborne pathogens control.	Placido A, Braganca I, Marani M, de Araujo AR, Vasconcelos AG, Batziou K, Domingues VF, Eaton P, Almeida Leite JRSA, Delerue-Matos C.	Mater Sci Eng C Mater Biol Appl	10.1016/j.msec.2017.02.027	2017
	Biofilm Development on Urinary Catheters Promotes the Appearance of Viable but Nonculturable Bacteria.	Wilks SA, Koerfer VV, Prieto JA, Fader M, Keevil CW.	mBio	10.1128/mbio.03584-20	2021
	Characterization and Antimicrobial Activity of Biodegradable Active Packaging Enriched with Clove and Thyme Essential Oil for Food Packaging Application.	Sharma S, Barkauskaite S, Duffy B, Jaiswal AK, Jaiswal S.	Foods	10.3390/foods9081117	2020
	Copper(II) and Zinc(II) Complexes with Bacterial Prodigiosin Are Targeting Site III of Bovine Serum Albumin and Acting as DNA Minor Groove Binders.	Pantelic L, Skaro Bogojevic S, Andrejevic TP, Pantovic BV, Markovic VR, Asanin DP, Milanovic Z, Ilic-Tomic T, Nikodinovic-Runic J, Glisic BD, Lazic J.	Int J Mol Sci	10.3390/ijms25158395	2024
	Rosemary Extract and Essential Oil as Drink Ingredients: An Evaluation of Their Chemical Composition, Genotoxicity, Antimicrobial, Antiviral, and Antioxidant Properties.	Christopoulou SD, Androutsopoulou C, Hahalis P, Kotsalou C, Vantarakis A, Lamari FN.	Foods	10.3390/foods10123143	2021
	Chemical Characterization, Antioxidant and Antimicrobial Properties of Different Types of Tissue of Cedrus brevifolia Henry Extracts.	Charalambous D, Eliades NH, Christoforou M, Kakouri E, Kanakis C, Tarantilis PA, Pantelidou M.	Molecules	10.3390/molecules27092717	2022
	Selective Activity of an Anthocyanin-Rich, Purified Blueberry Extract upon Pathogenic and Probiotic Bacteria.	Silva S, Costa EM, Machado M, Morais RM, Calhau C, Pintado M.	Foods	10.3390/foods12040734	2023
	Antimicrobial Activities of Saponaria cypria Boiss. Root Extracts, and the Identification of Nine Saponins and Six Phenolic Compounds.	Charalambous D, Christoforou M, Kitiri EN, Andreou M, Partassides D, Papachrysostomou C, Frantzi M, Karikas GA, Pantelidou M.	Molecules	10.3390/molecules27185812	2022
	Nanomechanical detection to empower robust monitoring of sepsis and microbial adaptive immune system-mediated proinflammatory disease.	Thanapirom K, Al-Akkad W, Pelut A, Sadouki Z, Finkel JB, Nardi-Hiebl S, Vogt W, Vojnar B, Wulf H, Eberhart L, McHugh TD, Rombouts K, Pinzani M, Tsochatzis E, Ndieyira JW.	Sci Rep	10.1038/s41598-024-80126-6	2024
	Evaluation and comparison of recombinase polymerase amplification coupled with lateral-flow bioassay for Escherichia coli O157:H7 detection using diifeerent genes.	Rani A, Ravindran VB, Surapaneni A, Shahsavari E, Haleyur N, Mantri N, Ball AS.	Sci Rep	10.1038/s41598-021-81312-6	2021
	Bioactive Properties of Kakadu Plum-Blended Products.	Zhou Y, Phan ADT, Akter S, Bobasa EM, Seididamyeh M, Sivakumar D, Sultanbawa Y.	Molecules	10.3390/molecules28062828	2023
	Screening of Plant Pollen Sources, Polyphenolic Compounds, Fatty Acids and Antioxidant/Antimicrobial Activity from Bee Pollen.	Gercek YC, Celik S, Bayram S.	Molecules	10.3390/molecules27010117	2021
	Cold Plasma-Based Fabrication and Characterization of Active Films Containing Different Types of Myristica fragrans Essential Oil Emulsion.	Yudhistira B, Sulaimana AS, Punthi F, Chang CK, Lung CT, Santoso SP, Gavahian M, Hsieh CW.	Polymers (Basel)	10.3390/polym14081618	2022
	Antimicrobial Activity and DNA/BSA Binding Affinity of Polynuclear Silver(I) Complexes with 1,2-Bis(4-pyridyl)ethane/ethene as Bridging Ligands.	Duric SZ, Vojnovic S, Andrejevic TP, Stevanovic NL, Savic ND, Nikodinovic-Runic J, Glisic BD, Djuran MI.	Bioinorg Chem Appl	10.1155/2020/3812050	2020
	Dinuclear Gallium(III) Complex With 1,3-Propanediamine-N,N'-Diacetate: Structural Characterization, Antimicrobial Activity, and DNA/BSA Interactions.	Pantovic BV, Asanin DP, Milanovic Z, Perdih F, Ilic-Tomic T, Radanovic DD, Turel I, Djuran MI, Glisic BD.	Bioinorg Chem Appl	10.1155/bca/8097589	2025
	Gram-negative Microbiota Blooms in Premature Twins Discordant for Parenteral Nutrition-associated Cholestasis.	Hourigan SK, Moutinho TJ, Berenz A, Papin J, Guha P, Bangiolo L, Oliphant S, Provenzano M, Baveja R, Baker R, Vilboux T, Levy S, Deopujari V, Nataro JP, Niederhuber JE, Moore SR.	J Pediatr Gastroenterol Nutr	10.1097/mpg.0000000000002617	2020
	Effects of single- and multi-strain probiotics on biofilm formation and in vitro adhesion to bladder cells by urinary tract pathogens.	Chapman CM, Gibson GR, Rowland I.	Anaerobe	10.1016/j.anaerobe.2014.02.001	2014
	Small Schiff Base Molecules-A Possible Strategy to Combat Biofilm-Related Infections.	Coanda M, Limban C, Nuta DC.	Antibiotics (Basel)	10.3390/antibiotics13010075	2024
Pathogenicity	Combined systems approaches reveal highly plastic responses to antimicrobial peptide challenge in Escherichia coli.	Kozlowska J, Vermeer LS, Rogers GB, Rehnnuma N, Amos SB, Koller G, McArthur M, Bruce KD, Mason AJ.	PLoS Pathog	10.1371/journal.ppat.1004104	2014
	Integrity of bacterial genomic DNA after autoclaving: possible implications for horizontal gene transfer and clinical waste management.	Yap JM, Goldsmith CE, Moore JE.	J Hosp Infect	10.1016/j.jhin.2012.11.016	2013
	Comparative in vitro inhibition of urinary tract pathogens by single- and multi-strain probiotics.	Chapman CM, Gibson GR, Todd S, Rowland I.	Eur J Nutr	10.1007/s00394-013-0501-2	2013
Biotechnology	Antioxidant, Antimicrobial Activities and Fatty Acid Compositions of Wild Berberis spp. by Different Techniques Combined with Chemometrics (PCA and HCA).	Gidik B.	Molecules	10.3390/molecules26247448	2021
	Screening of Bioactive Properties in Brown Algae from the Northwest Iberian Peninsula.	Silva A, Rodrigues C, Garcia-Oliveira P, Lourenco-Lopes C, Silva SA, Garcia-Perez P, Carvalho AP, Domingues VF, Barroso MF, Delerue-Matos C, Simal-Gandara J, Prieto MA.	Foods	10.3390/foods10081915	2021
	Nanotechnology in combating biofilm: A smart and promising therapeutic strategy.	Mohanta YK, Chakrabartty I, Mishra AK, Chopra H, Mahanta S, Avula SK, Patowary K, Ahmed R, Mishra B, Mohanta TK, Saravanan M, Sharma N.	Front Microbiol	10.3389/fmicb.2022.1028086	2022
Pathogenicity	Study of the In Vitro Antagonistic Activity of Various Single-Strain and Multi-Strain Probiotics against Escherichia coli.	Fijan S, Sulc D, Steyer A.	Int J Environ Res Public Health	10.3390/ijerph15071539	2018
	Prevalence of Salmonella spp. in slaughter pigs and carcasses in Irish abattoirs and their antimicrobial resistance.	Deane A, Murphy D, Leonard FC, Byrne W, Clegg T, Madigan G, Griffin M, Egan J, Prendergast DM.	Ir Vet J	10.1186/s13620-022-00211-y	2022
	Bioactive Compounds of Shrimp Shell Waste from Palaemon serratus and Palaemon varians from Portuguese Coast.	Maia ML, Grosso C, Barroso MF, Silva A, Delerue-Matos C, Domingues VF.	Antioxidants (Basel)	10.3390/antiox12020435	2023
	Studying the urine microbiome in superficial bladder cancer: samples obtained by midstream voiding versus cystoscopy.	Hourigan SK, Zhu W, S W Wong W, Clemency NC, Provenzano M, Vilboux T, Niederhuber JE, Deeken J, Chung S, McDaniel-Wiley K, Trump D.	BMC Urol	10.1186/s12894-020-0576-z	2020
	Evaluation of Essential Oils and Extracts of Rose Geranium and Rose Petals as Natural Preservatives in Terms of Toxicity, Antimicrobial, and Antiviral Activity.	Androutsopoulou C, Christopoulou SD, Hahalis P, Kotsalou C, Lamari FN, Vantarakis A.	Pathogens	10.3390/pathogens10040494	2021
	Gut microbial composition difference between pediatric ALL survivors and siblings.	Thomas R, Wong WSW, Saadon R, Vilboux T, Deeken J, Niederhuber J, Hourigan SK, Yang E.	Pediatr Hematol Oncol	10.1080/08880018.2020.1759740	2020
	Antibody opsonization enhances MAIT cell responsiveness to bacteria via a TNF-dependent mechanism.	Banki Z, Krabbendam L, Klaver D, Leng T, Kruis S, Mehta H, Mullauer B, Orth-Holler D, Stoiber H, Willberg CB, Klenerman P.	Immunol Cell Biol	10.1111/imcb.12239	2019
	Phytochemical Characteristics and Antimicrobial Activity of Australian Grown Garlic (Allium Sativum L.) Cultivars.	Phan ADT, Netzel G, Chhim P, Netzel ME, Sultanbawa Y.	Foods	10.3390/foods8090358	2019
Enzymology	Simple lysis of bacterial cells for DNA-based diagnostics using hydrophilic ionic liquids.	Martzy R, Bica-Schroder K, Palvolgyi AM, Kolm C, Jakwerth S, Kirschner AKT, Sommer R, Krska R, Mach RL, Farnleitner AH, Reischer GH.	Sci Rep	10.1038/s41598-019-50246-5	2019
	Copper(II) and Zinc(II) Complexes with the Clinically Used Fluconazole: Comparison of Antifungal Activity and Therapeutic Potential.	Stevanovic NL, Aleksic I, Kljun J, Skaro Bogojevic S, Veselinovic A, Nikodinovic-Runic J, Turel I, Djuran MI, Glisic BD.	Pharmaceuticals (Basel)	10.3390/ph14010024	2020
	A Novel Flow Cytometric Approach for the Quantification and Quality Control of Chlamydia trachomatis Preparations.	Klasinc R, Reiter M, Digruber A, Tschulenk W, Walter I, Kirschner A, Spittler A, Stockinger H.	Pathogens	10.3390/pathogens10121617	2021
Enzymology	Poikilothermic Animals as a Previously Unrecognized Source of Fecal Indicator Bacteria in a Backwater Ecosystem of a Large River.	Frick C, Vierheilig J, Linke R, Savio D, Zornig H, Antensteiner R, Baumgartner C, Bucher C, Blaschke AP, Derx J, Kirschner AKT, Ryzinska-Paier G, Mayer R, Seidl D, Nadiotis-Tsaka T, Sommer R, Farnleitner AH.	Appl Environ Microbiol	10.1128/aem.00715-18	2018
	Pulsed-plasma gas-discharge inactivation of microbial pathogens in chilled poultry wash water.	Rowan NJ, Espie S, Harrower J, Anderson JG, Marsili L, MacGregor SJ.	J Food Prot	10.4315/0362-028x-70.12.2805	2007
	Evaluation of Alternative Methods of Tunnel Composting (submitted by the European Composting Network).	EFSA Panel on Biological Hazards (EFSA BIOHAZ Panel), Koutsoumanis K, Allende A, Bolton DJ, Bover-Cid S, Chemaly M, Davies R, De Cesare A, Herman LM, Hilbert F, Lindqvist R, Nauta M, Peixe L, Ru G, Simmons M, Skandamis P, Suffredini E, Escamez PF, Ortiz-Pelaez A, Ashe S, Alvarez-Ordonez A.	EFSA J	10.2903/j.efsa.2020.6226	2020
	Antimicrobial Activity of Medicinal Plants Correlates with the Proportion of Antagonistic Endophytes.	Egamberdieva D, Wirth S, Behrendt U, Ahmad P, Berg G.	Front Microbiol	10.3389/fmicb.2017.00199	2017
Enzymology	Evaluation of an Inexpensive Growth Medium for Direct Detection of Escherichia coli in Temperate and Sub-Tropical Waters.	Bain RE, Woodall C, Elliott J, Arnold BF, Tung R, Morley R, du Preez M, Bartram JK, Davis AP, Gundry SW, Pedley S.	PLoS One	10.1371/journal.pone.0140997	2015
	Structural Characterization, Antimicrobial Activity and BSA/DNA Binding Affinity of New Silver(I) Complexes with Thianthrene and 1,8-Naphthyridine.	Asanin DP, Skaro Bogojevic S, Perdih F, Andrejevic TP, Milivojevic D, Aleksic I, Nikodinovic-Runic J, Glisic BD, Turel I, Djuran MI.	Molecules	10.3390/molecules26071871	2021
	Antimicrobial Biomaterials Based on Physical and Physicochemical Action.	Nowotnick AG, Xi Z, Jin Z, Khalatbarizamanpoor S, Brauer DS, Loffler B, Jandt KD.	Adv Healthc Mater	10.1002/adhm.202402001	2024
	Phytochemical Composition and Bioactive Effects of Salvia africana, Salvia officinalis 'Icterina' and Salvia mexicana Aqueous Extracts.	Afonso AF, Pereira OR, Pereira OR, Fernandes A, Calhelha RC, Silva AMS, Ferreira ICFR, Cardoso SM.	Molecules	10.3390/molecules24234327	2019
	A new apparatus to induce lysis of planktonic microbial cells by shock compression, cavitation and spray.	Schiffer A, Gardner MN, Lynn RH, Tagarielli VL.	R Soc Open Sci	10.1098/rsos.160939	2017
Pathogenicity	The effects of 405 nm light on bacterial membrane integrity determined by salt and bile tolerance assays, leakage of UV-absorbing material and SYTOX green labelling.	McKenzie K, Maclean M, Grant MH, Ramakrishnan P, MacGregor SJ, Anderson JG.	Microbiology (Reading)	10.1099/mic.0.000350	2016
	Conformational flexibility determines selectivity and antibacterial, antiplasmodial, and anticancer potency of cationic alpha-helical peptides.	Vermeer LS, Lan Y, Abbate V, Ruh E, Bui TT, Wilkinson LJ, Kanno T, Jumagulova E, Kozlowska J, Patel J, McIntyre CA, Yam WC, Siu G, Atkinson RA, Lam JK, Bansal SS, Drake AF, Mitchell GH, Mason AJ.	J Biol Chem	10.1074/jbc.m112.359067	2012
	Multi-Strain Probiotics: Synergy among Isolates Enhances Biological Activities.	Kwoji ID, Aiyegoro OA, Okpeku M, Adeleke MA.	Biology (Basel)	10.3390/biology10040322	2021
	The Health-Benefits and Phytochemical Profile of Salvia apiana and Salvia farinacea var. Victoria Blue Decoctions.	Afonso AF, Pereira OR, Pereira OR, Fernandes ASF, Calhelha RC, Silva AMS, Ferreira ICFR, Cardoso SM.	Antioxidants (Basel)	10.3390/antiox8080241	2019
	Optimization of Ultrasonic Extraction of Nutraceutical and Pharmaceutical Compounds from Bee Pollen with Deep Eutectic Solvents Using Response Surface Methodology.	Celik S, Kutlu N, Gercek YC, Bayram S, Pandiselvam R, Bayram NE.	Foods	10.3390/foods11223652	2022
	Metabolites and Biological Activities of Thymus zygis, Thymus pulegioides, and Thymus fragrantissimus Grown under Organic Cultivation.	Afonso AF, Pereira OR, Pereira OR, Valega M, Silva AMS, Cardoso SM.	Molecules	10.3390/molecules23071514	2018
	Effect of lysozyme or nisin on survival of some bacteria treated with high pressure at subzero temperature.	Malinowska-Panczyk E, Kolodziejska I.	Braz J Microbiol	10.1590/s1517-83822009000400006	2009
	Probiotics to counteract biofilm-associated infections: promising and conflicting data.	Vuotto C, Longo F, Donelli G.	Int J Oral Sci	10.1038/ijos.2014.52	2014
Metabolism	Structural contributions to the intracellular targeting strategies of antimicrobial peptides.	Lan Y, Ye Y, Kozlowska J, Lam JK, Drake AF, Mason AJ.	Biochim Biophys Acta	10.1016/j.bbamem.2010.07.003	2010
	Antibacterial Films Made of Ionic Complexes of Poly(gamma-glutamic acid) and Ethyl Lauroyl Arginate.	Gamarra-Montes A, Missagia B, Morato J, Munoz-Guerra S.	Polymers (Basel)	10.3390/polym10010021	2017
	Combined Systems Approaches Reveal a Multistage Mode of Action of a Marine Antimicrobial Peptide against Pathogenic Escherichia coli and Its Protective Effect against Bacterial Peritonitis and Endotoxemia.	Wang X, Teng D, Mao R, Yang N, Hao Y, Wang J.	Antimicrob Agents Chemother	10.1128/aac.01056-16	2017
Enzymology	Metagenomic analysis of bloodstream infections in patients with acute leukemia and therapy-induced neutropenia.	Gyarmati P, Kjellander C, Aust C, Song Y, Ohrmalm L, Giske CG.	Sci Rep	10.1038/srep23532	2016
	Health-Promoting Effects of Thymus herba-barona, Thymus pseudolanuginosus, and Thymus caespititius Decoctions.	Afonso AF, Pereira OR, Pereira OR, Neto RT, Silva AMS, Cardoso SM.	Int J Mol Sci	10.3390/ijms18091879	2017
	The aphrodisiac herb Carpolobia: A biopharmacological and phytochemical review.	Nwidu LL, Nwafor PA, Vilegas W.	Pharmacogn Rev	10.4103/0973-7847.162128	2015
Enzymology	Pathogenic Escherichia coli found in sewage treatment plants and environmental waters.	Anastasi EM, Matthews B, Stratton HM, Katouli M.	Appl Environ Microbiol	10.1128/aem.00657-12	2012
Metabolism	Antimicrobial Peptide Potency is Facilitated by Greater Conformational Flexibility when Binding to Gram-negative Bacterial Inner Membranes.	Amos ST, Vermeer LS, Ferguson PM, Kozlowska J, Davy M, Bui TT, Drake AF, Lorenz CD, Mason AJ.	Sci Rep	10.1038/srep37639	2016
	A Complementary Isothermal Amplification Method to the U.S. EPA Quantitative Polymerase Chain Reaction Approach for the Detection of Enterococci in Environmental Waters.	Kolm C, Martzy R, Brunner K, Mach RL, Krska R, Heinze G, Sommer R, Reischer GH, Farnleitner AH.	Environ Sci Technol	10.1021/acs.est.7b01074	2017
Enzymology	Occurrence of human-associated Bacteroidetes genetic source tracking markers in raw and treated wastewater of municipal and domestic origin and comparison to standard and alternative indicators of faecal pollution.	Mayer RE, Bofill-Mas S, Egle L, Reischer GH, Schade M, Fernandez-Cassi X, Fuchs W, Mach RL, Lindner G, Kirschner A, Gaisbauer M, Piringer H, Blaschke AP, Girones R, Zessner M, Sommer R, Farnleitner AH.	Water Res	10.1016/j.watres.2015.12.031	2016
	Nutritional and Physiological Effects of Postharvest UV Radiation on Vegetables: A Review.	Sonntag F, Liu H, Neugart S.	J Agric Food Chem	10.1021/acs.jafc.3c00481	2023
	Fate and Survival of Campylobacter coli in Swine Manure at Various Temperatures.	Bui XT, Wolff A, Madsen M, Bang DD.	Front Microbiol	10.3389/fmicb.2011.00262	2011
	Measuring the stiffness of bacterial cells from growth rates in hydrogels of tunable elasticity.	Tuson HH, Auer GK, Renner LD, Hasebe M, Tropini C, Salick M, Crone WC, Gopinathan A, Huang KC, Weibel DB.	Mol Microbiol	10.1111/j.1365-2958.2012.08063.x	2012
	Escherichia coli inactivation kinetics in anaerobic digestion of dairy manure under moderate, mesophilic and thermophilic temperatures.	Pandey PK, Soupir ML.	AMB Express	10.1186/2191-0855-1-18	2011
Pathogenicity	Antimicrobial activity of two South African honeys produced from indigenous Leucospermum cordifolium and Erica species on selected micro-organisms.	Basson NJ, Grobler SR.	BMC Complement Altern Med	10.1186/1472-6882-8-41	2008
Pathogenicity	Evaluation of Antimicrobial Efficiency of New Polymers Comprised by Covalently Attached and/or Electrostatically Bound Bacteriostatic Species, Based on Quaternary Ammonium Compounds.	Kougia E, Tselepi M, Vasilopoulos G, Lainioti GCh, Koromilas ND, Druvari D, Bokias G, Vantarakis A, Kallitsis JK.	Molecules	10.3390/molecules201219768	2015
	A bioactivity versus ethnobotanical survey of medicinal plants from Nigeria, west Africa.	Lifongo LL, Simoben CV, Ntie-Kang F, Babiaka SB, Judson PN.	Nat Prod Bioprospect	10.1007/s13659-014-0005-7	2014
Metabolism	A comprehensive guide to studying inflammasome activation and cell death.	Tweedell RE, Malireddi RKS, Kanneganti TD.	Nat Protoc	10.1038/s41596-020-0374-9	2020
	Inactivation of bacterial pathogens following exposure to light from a 405-nanometer light-emitting diode array.	Maclean M, MacGregor SJ, Anderson JG, Woolsey G.	Appl Environ Microbiol	10.1128/aem.01892-08	2009
	Reference Gene Selection for Insect Expression Studies Using Quantitative Real-Time PCR: The Head of the Honeybee, Apis mellifera, After a Bacterial Challenge	Scharlaken B, de Graaf D, Goossens K, Brunain M, Peelman L, Jacobs F.	J Insect Sci		2008
Pathogenicity	A study of the activity of soft soaps prepared from a homologous series of saturated fatty acids against cells of Escherichia coli NCTC 9001.	Lamikanra A, Sholola OA.	Microbios		1984
	Augmentation of killing of Escherichia coli O157 by combinations of lactate, ethanol, and low-pH conditions.	Jordan SL, Glover J, Malcolm L, Thomson-Carter FM, Booth IR, Park SF.	Appl Environ Microbiol	10.1128/aem.65.3.1308-1311.1999	1999
Pathogenicity	Metal nanoparticles: understanding the mechanisms behind antibacterial activity.	Slavin YN, Asnis J, Hafeli UO, Bach H.	J Nanobiotechnology	10.1186/s12951-017-0308-z	2017
	Effects of pulsed electric fields on inactivation kinetics of Listeria innocua.	Wouters PC, Dutreux N, Smelt JP, Lelieveld HL.	Appl Environ Microbiol	10.1128/aem.65.12.5364-5371.1999	1999
	BACTOX, a rapid bioassay that uses protozoa to assess the toxicity of bacteria.	Schlimme W, Marchiani M, Hanselmann K, Jenni B.	Appl Environ Microbiol	10.1128/aem.65.6.2754-2757.1999	1999
Phylogeny	Evaluation of numerical analysis of SDS-PAGE of protein patterns for typing Enterobacter cloacae.	Costas M, Sloss LL, Owen RJ, Gaston MA.	Epidemiol Infect	10.1017/s0950268800030624	1989
	P blood group phenotype, proteus antibody titres, and rheumatoid arthritis.	Deighton CM, Gray J, Roberts DF, Bint AJ, Walker DJ.	Ann Rheum Dis	10.1136/ard.51.11.1242	1992
Phylogeny	Effect of different growth conditions on the discrimination of three bacteria by pyrolysis gas-liquid chromatography.	Gutteridge CS, Norris JR.	Appl Environ Microbiol	10.1128/aem.40.3.462-465.1980	1980
Cultivation	A comparison of the performance of cystine lactose electrolyte deficient (CLED) agar with Oxoid chromogenic urinary tract infection (CUTI) medium for the isolation and presumptive identification of organisms from urine.	Fallon D, Andrews N, Frodsham D, Gee B, Howe S, Iliffe A, Nye KJ, Warren RE.	J Clin Pathol	10.1136/jcp.55.7.524	2002
	A novel real-time PCR assay for specific detection and quantification of Mycobacterium avium subsp. paratuberculosis in milk with the inherent possibility of differentiation between viable and dead cells.	Dzieciol M, Volgger P, Khol J, Baumgartner W, Wagner M, Hein I.	BMC Res Notes	10.1186/1756-0500-3-251	2010
	A review of the responses of two- and three-dimensional engineered tissues to electric fields.	Hronik-Tupaj M, Kaplan DL.	Tissue Eng Part B Rev	10.1089/ten.teb.2011.0244	2012
Metabolism	Effect of glutaraldehyde on cell viability, triphenyltetrazolium reduction, oxygen uptake, and beta-galactosidase activity in Escherichia coli.	Munton TJ, Russell AD.	Appl Microbiol	10.1128/am.26.4.508-511.1973	1973
	A quantitative PCR (TaqMan) assay for pathogenic Leptospira spp.	Smythe LD, Smith IL, Smith GA, Dohnt MF, Symonds ML, Barnett LJ, McKay DB.	BMC Infect Dis	10.1186/1471-2334-2-13	2002
	Apidaecins: antibacterial peptides from honeybees.	Casteels P, Ampe C, Jacobs F, Vaeck M, Tempst P.	EMBO J	10.1002/j.1460-2075.1989.tb08368.x	1989
	Microbial communities and bioactive compounds in marine sponges of the family irciniidae-a review.	Hardoim CC, Costa R.	Mar Drugs	10.3390/md12105089	2014
	Synergistic actions of nisin, sublethal ultrahigh pressure, and reduced temperature on bacteria and yeast.	ter Steeg PF, Hellemons JC, Kok AE.	Appl Environ Microbiol	10.1128/aem.65.9.4148-4154.1999	1999
	Selective Medium for Enumeration of Tannin-Protein Complex-Degrading Streptococcus spp. in Feces of Koalas.	Osawa R, Mitsuoka T.	Appl Environ Microbiol	10.1128/aem.56.11.3609-3611.1990	1990
Phylogeny	Identification of the Brucella melitensis vaccine strain Rev.1 in animals and humans in Israel by PCR analysis of the PstI site polymorphism of its omp2 gene.	Bardenstein S, Mandelboim M, Ficht TA, Baum M, Banai M.	J Clin Microbiol	10.1128/jcm.40.2.1475-1480.2002	2002
Pathogenicity	Enhanced activity of streptomycin and chloramphenicol against intracellular Escherichia coli in the J774 macrophage cell line mediated by liposome delivery.	Stevenson M, Baillie AJ, Richards RM.	Antimicrob Agents Chemother	10.1128/aac.24.5.742	1983
	An extended model for transfer of micro-organisms via the hands: differences between organisms and the effect of alcohol disinfection.	Mackintosh CA, Hoffman PN.	J Hyg (Lond)	10.1017/s0022172400064561	1984
Pathogenicity	Aspects of the mechanism of action of some cephalosporins.	Russell AD, Fountain RH.	J Bacteriol	10.1128/jb.106.1.65-69.1971	1971
Pathogenicity	Antimicrobial activity of a series of halo-nitro compounds.	Bowman WR, Stretton RJ.	Antimicrob Agents Chemother	10.1128/aac.2.6.504	1972
	Monoclonal antibodies show Listeria monocytogenes in necropsy tissue samples.	McLauchlin J, Black A, Green HT, Nash JQ, Taylor AG.	J Clin Pathol	10.1136/jcp.41.9.983	1988
	Test reproducibility of the API (20E), Enterotube, and Pathotec systems.	Holmes B, Willcox WR, Lapage SP, Malnick H.	J Clin Pathol	10.1136/jcp.30.4.381	1977
	A Stroll Through Saffron Fields, Cannabis Leaves, and Cherry Reveals the Path to Waste-Derived Antimicrobial Bioproducts.	Lamponi S, Barletta R, Geminiani M, Trezza A, Frusciante L, Shabab B, Nyong'a CN, Santucci A.	Pharmaceuticals (Basel)	10.3390/ph18071003	2025
	Tannin-Based Microbicidal Coatings for Hospital Privacy Curtains.	Widsten P, Salo S, Niemela K, Helin H, Salonen M, Alakomi HL.	J Funct Biomater	10.3390/jfb14040187	2023
	Antimicrobial and Flame-Retardant Coatings Prepared from Nano- and Microparticles of Unmodified and Nitrogen-Modified Polyphenols.	Widsten P, Salo S, Hakkarainen T, Nguyen TL, Borrega M, Fearon O.	Polymers (Basel)	10.3390/polym15040992	2023
	Anti-Microbiological, Anti-Hyperglycemic and Anti-Obesity Potency of Natural Antioxidants in Fruit Fractions of Saskatoon Berry.	Lachowicz S, Wisniewski R, Ochmian I, Drzymala K, Pluta S.	Antioxidants (Basel)	10.3390/antiox8090397	2019
	Nanosilver-Silica Composite: Prolonged Antibacterial Effects and Bacterial Interaction Mechanisms for Wound Dressings.	Mosselhy DA, Granbohm H, Hynonen U, Ge Y, Palva A, Nordstrom K, Hannula SP.	Nanomaterials (Basel)	10.3390/nano7090261	2017
	Improvement of Health-Promoting Functionality of Rye Bread by Fortification with Free and Microencapsulated Powders from Amelanchier alnifolia Nutt.	Lachowicz S, Swieca M, Pejcz E.	Antioxidants (Basel)	10.3390/antiox9070614	2020
	Silica-Gentamicin Nanohybrids: Synthesis and Antimicrobial Action.	Mosselhy DA, Ge Y, Gasik M, Nordstrom K, Natri O, Hannula SP.	Materials (Basel)	10.3390/ma9030170	2016
	Susceptibility of the Different Oxygen-Sensing Probes to Interferences in Respirometric Bacterial Assays with Complex Media.	Zanetti C, Li L, Gaspar RDL, Santovito E, Elisseeva S, Collins SG, Maguire AR, Papkovsky DB.	Sensors (Basel)	10.3390/s24010267	2024
	The Use of Porous Silica Particles as Carriers for a Smart Delivery of Antimicrobial Essential Oils in Food Applications.	Sullivan DJ, O'Mahony TF, Cruz-Romero MC, Cummins E, Kerry JP, Morris MA.	ACS Omega	10.1021/acsomega.1c03549	2021
Phylogeny	Phylogenetic analysis and antimicrobial susceptibility profile of uropathogens.	Ullah H, Bashir K, Idrees M, Ullah A, Hassan N, Khan S, Nasir B, Nadeem T, Ahsan H, Khan MI, Ali Q, Muhammad S, Afzal M.	PLoS One	10.1371/journal.pone.0262952	2022
	Electronic tongue for determining the limit of detection of human pathogenic bacteria.	Abu Rumaila A, Abu Rumaila B, Masoud W, Ruiz-Canales A, Abu-Khalaf N.	ADMET DMPK	10.5599/admet.1650	2023
	In Vitro Characterization of Indigenous Probiotic Strains Isolated from Colombian Creole Pigs.	Betancur C, Martinez Y, Tellez-Isaias G, Avellaneda MC, Velazquez-Marti B.	Animals (Basel)	10.3390/ani10071204	2020
	[Screening, domestication and identification of intestinal uric acid degrading bacteria in low uric acid population].	Tian T, Chen W, Liang M, Mayina Kahaer, Li R, Sun Y.	Sheng Wu Yi Xue Gong Cheng Xue Za Zhi	10.7507/1001-5515.202111028	2022
	Evaluation of the Deterioration of Untreated Commercial Polystyrene by Psychrotrophic Antarctic Bacterium.	Tang PM, Habib S, Shukor MYA, Alias SA, Smykla J, Yasid NA.	Polymers (Basel)	10.3390/polym15081841	2023
	Size Distribution and Pathogenic Potential of Culturable Airborne Clostridium spp. in a Suburb of Toyama City, Japan.	Seki M, Iwamoto R, Hou J, Fujiyoshi S, Maruyama F, Furusawa Y, Kagaya S, Sakatoku A, Nakamura S, Tanaka D.	Microbes Environ	10.1264/jsme2.me24078	2025
	First Detection of Carbapenem-Resistant Escherichia fergusonii Strains Harbouring Beta-Lactamase Genes from Clinical Samples.	Adesina T, Nwinyi O, De N, Akinnola O, Omonigbehin E.	Pathogens	10.3390/pathogens8040164	2019
	Enhanced Antibiotic Tolerance of an In Vitro Multispecies Uropathogen Biofilm Model, Useful for Studies of Catheter-Associated Urinary Tract Infections.	Hou J, Wang L, Alm M, Thomsen P, Monsen T, Ramstedt M, Burmolle M.	Microorganisms	10.3390/microorganisms10061207	2022
	Hiding in Plain Sight: Characterization of Aeromonas Species Isolated from a Recreational Estuary Reveals the Carriage and Putative Dissemination of Resistance Genes.	Canellas ALB, de Oliveira BFR, Laport MS.	Antibiotics (Basel)	10.3390/antibiotics12010084	2023
	Inhibition of Adherence and Biofilm Formation of Pseudomonas aeruginosa by Immobilized ZnO Nanoparticles on Silicone Urinary Catheter Grafted by Gamma Irradiation.	Elzahaby DA, Farrag HA, Haikal RR, Alkordi MH, Abdeltawab NF, Ramadan MA.	Microorganisms	10.3390/microorganisms11040913	2023
Genetics	Extended Spectrum Beta-Lactamase-Producing Gram-Negative Bacteria Recovered From an Amazonian Lake Near the City of Belém, Brazil.	Freitas DY, Araujo S, Folador ARC, Ramos RTJ, Azevedo JSN, Tacao M, Silva A, Henriques I, Barauna RA.	Front Microbiol	10.3389/fmicb.2019.00364	2019
Pathogenicity	Isolation and Characterization of a Novel Lytic Phage, vB_PseuP-SA22, and Its Efficacy against Carbapenem-Resistant Pseudomonas aeruginosa.	Teklemariam AD, Al-Hindi RR, Alharbi MG, Alotibi I, Azhari SA, Qadri I, Alamri T, Esmael A, Harakeh S.	Antibiotics (Basel)	10.3390/antibiotics12030497	2023
Enzymology	The endophytic microbiota of Citrus limon is transmitted from seed to shoot highlighting differences of bacterial and fungal community structures.	Faddetta T, Abbate L, Alibrandi P, Arancio W, Siino D, Strati F, De Filippo C, Fatta Del Bosco S, Carimi F, Puglia AM, Cardinale M, Gallo G, Mercati F.	Sci Rep	10.1038/s41598-021-86399-5	2021
Pathogenicity	Probiotics: Symbiotic Relationship with the Animal Host.	Melara EG, Avellaneda MC, Valdivie M, Garcia-Hernandez Y, Aroche R, Martinez Y.	Animals (Basel)	10.3390/ani12060719	2022
	Genome sequences and annotation of two urinary isolates of E. coli.	Price TK, Mehrtash A, Kalesinskas L, Malki K, Hilt EE, Putonti C, Wolfe AJ.	Stand Genomic Sci	10.1186/s40793-016-0202-6	2016
	Improving Quantitative Power in Digital PCR through Digital High-Resolution Melting.	Aralar A, Yuan Y, Chen K, Geng Y, Ortiz Velez D, Sinha M, Lawrence SM, Fraley SI.	J Clin Microbiol	10.1128/jcm.00325-20	2020
	Antimicrobial activity of lipids extracted from Hermetia illucens reared on different substrates.	Franco A, Scieuzo C, Salvia R, Pucciarelli V, Borrelli L, Addeo NF, Bovera F, Laginestra A, Schmitt E, Falabella P.	Appl Microbiol Biotechnol	10.1007/s00253-024-13005-9	2024
	In Vitro Evaluation of the Antibacterial Activity of the Peptide Fractions Extracted from the Hemolymph of Hermetia illucens (Diptera: Stratiomyidae).	Scieuzo C, Giglio F, Rinaldi R, Lekka ME, Cozzolino F, Monaco V, Monti M, Salvia R, Falabella P.	Insects	10.3390/insects14050464	2023
	Sustainable and Scalable Enzymatic Production, Structural Elucidation, And Biological Evaluation of Novel Phlorizin Analogues.	Minsat L, Li Y, Peyrot C, Martinez A, Borie N, Peru A, Godon B, Neve C, Brunissen F, Brunois F, Dosso A, Allais F, Renault JH.	ChemSusChem	10.1002/cssc.202401498	2025
	Phenolic Compounds Extracted from Cherry Tree (Prunus avium) Branches: Impact of the Process on Cosmetic Properties.	Willig G, Brunissen F, Brunois F, Godon B, Magro C, Monteux C, Peyrot C, Ioannou I.	Antioxidants (Basel)	10.3390/antiox11050813	2022
	Bifidobacteriumlongum subsp. infantis CECT7210 (B. infantis IM-1^®) Displays In Vitro Activity against Some Intestinal Pathogens.	Ruiz L, Florez AB, Sanchez B, Moreno-Munoz JA, Rodriguez-Palmero M, Jimenez J, Gavilan CGLR, Gueimonde M, Ruas-Madiedo P, Margolles A.	Nutrients	10.3390/nu12113259	2020
Pathogenicity	Endometrial Dysbiosis Is Related to Inflammatory Factors in Women with Repeated Implantation Failure: A Pilot Study.	Cela V, Daniele S, Obino MER, Ruggiero M, Zappelli E, Ceccarelli L, Papini F, Marzi I, Scarfo G, Tosi F, Franzoni F, Martini C, Artini PG.	J Clin Med	10.3390/jcm11092481	2022
	Pilot market surveillance of GMM contaminations in alpha-amylase food enzyme products: A detection strategy strengthened by a newly developed qPCR method targeting a GM Bacillus licheniformis producing alpha-amylase.	Fraiture MA, Gobbo A, Guillitte C, Marchesi U, Verginelli D, De Greve J, D'aes J, Vanneste K, Papazova N, Roosens NHC.	Food Chem (Oxf)	10.1016/j.fochms.2023.100186	2024
Metabolism	Phylotype-Level Profiling of Lactobacilli in Highly Complex Environments by Means of an Internal Transcribed Spacer-Based Metagenomic Approach.	Milani C, Duranti S, Mangifesta M, Lugli GA, Turroni F, Mancabelli L, Viappiani A, Anzalone R, Alessandri G, Ossiprandi MC, van Sinderen D, Ventura M.	Appl Environ Microbiol	10.1128/aem.00706-18	2018
Pathogenicity	Bacterial Long-Range Warfare: Aerial Killing of Legionella pneumophila by Pseudomonas fluorescens.	Corre MH, Mercier A, Bouteiller M, Khalil A, Ginevra C, Depayras S, Dupont C, Rouxel M, Gallique M, Grac L, Jarraud S, Giron D, Merieau A, Berjeaud JM, Verdon J.	Microbiol Spectr	10.1128/spectrum.00404-21	2021
	Shedding Light on the Antimicrobial Peptide Arsenal of Terrestrial Isopods: Focus on Armadillidins, a New Crustacean AMP Family.	Becking T, Delaunay C, Cordaux R, Berjeaud JM, Braquart-Varnier C, Verdon J.	Genes (Basel)	10.3390/genes11010093	2020
	Intra-amoeba multiplication induces chemotaxis and biofilm colonization and formation for Legionella.	Bigot R, Bertaux J, Frere J, Berjeaud JM.	PLoS One	10.1371/journal.pone.0077875	2013
	Assessing the fecal microbiota: an optimized ion torrent 16S rRNA gene-based analysis protocol.	Milani C, Hevia A, Foroni E, Duranti S, Turroni F, Lugli GA, Sanchez B, Martin R, Gueimonde M, van Sinderen D, Margolles A, Ventura M.	PLoS One	10.1371/journal.pone.0068739	2013
	Validation and Application of a Real-time PCR Protocol for the Specific Detection and Quantification of Clavibacter michiganensis subsp. sepedonicus in Potato.	Cho MS, Park DH, Namgung M, Ahn TY, Park DS.	Plant Pathol J	10.5423/ppj.oa.02.2015.0019	2015
	Intestinal dysbiosis associated with systemic lupus erythematosus.	Hevia A, Milani C, Lopez P, Cuervo A, Arboleya S, Duranti S, Turroni F, Gonzalez S, Suarez A, Gueimonde M, Ventura M, Sanchez B, Margolles A.	mBio	10.1128/mbio.01548-14	2014
	Armadillidin H, a Glycine-Rich Peptide from the Terrestrial Crustacean Armadillidium vulgare, Displays an Unexpected Wide Antimicrobial Spectrum with Membranolytic Activity.	Verdon J, Coutos-Thevenot P, Rodier MH, Landon C, Depayras S, Noel C, La Camera S, Moumen B, Greve P, Bouchon D, Berjeaud JM, Braquart-Varnier C.	Front Microbiol	10.3389/fmicb.2016.01484	2016
	Three New Depsipeptides, Homiamides A-C, Isolated from Streptomyces sp., ROA-065.	Kim JH, Lee JY, Lee J, Hillman PF, Lee J, Choi B, Paik MJ, Lee S, Nam SJ.	Molecules	10.3390/molecules29235539	2024
	Safety Assessment and Evaluation of Probiotic Potential of Lactobacillus bulgaricus IDCC 3601 for Human Use.	Lee M, Bang WY, Lee HB, Yang SY, Lee KS, Kang HJ, Hong SM, Yang J.	Microorganisms	10.3390/microorganisms12102063	2024
	Non-Thermal Microbial Inactivation Using Underwater Plasma: Synergistic Effects of Capillary Discharge on E. coli and M. testaceum.	Hong EJ, Park S, Kim SB, Ryu S.	Foods	10.3390/foods14173143	2025
	Gut microbiota differences, metabolite changes, and disease intervention during metabolic - dysfunction - related fatty liver progression.	Shu JZ, Huang YH, He XH, Liu FY, Liang QQ, Yong XT, Xie YF.	World J Hepatol	10.4254/wjh.v17.i3.103854	2025
	Labdane-Type Diterpenoids from Streptomyces griseorubens and Their Antimicrobial and Cytotoxic Activities.	Heo CS, Kang JS, Yang JW, Lee MA, Lee HS, Shin HJ.	Int J Mol Sci	10.3390/ijms25063311	2024
	Florfenicol-induced dysbiosis impairs intestinal homeostasis and host immune system in laying hens.	Yu K, Choi I, Kim M, Pyung YJ, Lee JS, Choi Y, Won S, Kim Y, Park BC, Han SH, Park TS, Dalgaard TS, Yun CH.	J Anim Sci Biotechnol	10.1186/s40104-025-01186-w	2025
	Geliboluols A-D: Kaurane-Type Diterpenoids from the Marine-Derived Rare Actinomycete Actinomadura geliboluensis.	Heo CS, Kang JS, Yang JW, Lee MA, Lee HS, Kim CH, Shin HJ.	Mar Drugs	10.3390/md23020078	2025
	Comparison of Antibacterial Activities of Korean Pine (Pinus densiflora) Needle Steam Distillation Extract on Escherichia coli and Staphylococcus aureus Focusing on Membrane Fluidity and Genes Involved in Membrane Lipids and Stress.	Zhang Y, Chung WK, Moon SH, Lee JG, Om AS.	Molecules	10.3390/molecules29010165	2023
	Lactobacillus sakei MJM60958 as a Potential Probiotic Alleviated Non-Alcoholic Fatty Liver Disease in Mice Fed a High-Fat Diet by Modulating Lipid Metabolism, Inflammation, and Gut Microbiota.	Nguyen HT, Gu M, Werlinger P, Cho JH, Cheng J, Suh JW.	Int J Mol Sci	10.3390/ijms232113436	2022
	Lactobacillus reuteri MJM60668 Prevent Progression of Non-Alcoholic Fatty Liver Disease through Anti-Adipogenesis and Anti-inflammatory Pathway.	Werlinger P, Nguyen HT, Gu M, Cho JH, Cheng J, Suh JW.	Microorganisms	10.3390/microorganisms10112203	2022
	Isolation of Scalimides A-L: beta-Alanine-Bearing Scalarane Analogs from the Marine Sponge Spongia sp.	Shin AY, Lee HS, Lee J.	Mar Drugs	10.3390/md20110726	2022
	Artificially intelligent nasal perception for rapid sepsis diagnostics.	Shin J, Kim GS, Ha S, Yoon T, Lee J, Lee T, Heo W, Lee K, Park SJ, Park S, Song J, Hur S, Song HC, Jang JS, Kim JS, Jung HI, Kang CY.	NPJ Digit Med	10.1038/s41746-025-01851-4	2025
	Antibacterial and Cytotoxic Phenolic Polyketides from Two Marine-Derived Fungal Strains of Aspergillus unguis.	Anh CV, Kwon JH, Kang JS, Lee HS, Heo CS, Shin HJ.	Pharmaceuticals (Basel)	10.3390/ph15010074	2022
	A New Thiopeptide Antibiotic, Micrococcin P3, from a Marine-Derived Strain of the Bacterium Bacillus stratosphericus.	Wang W, Park KH, Lee J, Oh E, Park C, Kang E, Lee J, Kang H.	Molecules	10.3390/molecules25194383	2020
	Pyrrole-Containing Alkaloids from a Marine-Derived Actinobacterium Streptomyces zhaozhouensis and Their Antimicrobial and Cytotoxic Activities.	Heo CS, Kang JS, Kwon JH, Anh CV, Shin HJ.	Mar Drugs	10.3390/md21030167	2023
	The Effect of Gap Distance between a Pin and Water Surface on the Inactivation of Escherichia coli Using a Pin-to-Water Plasma.	Lim J, Hong EJ, Kim SB, Ryu S.	Int J Mol Sci	10.3390/ijms23105423	2022
	Complete Genome Sequence of Lactobacillus crispatus AB70, Isolated from a Vaginal Swab from a Healthy Pregnant Korean Woman.	Chang DH, Rhee MS, Lee SK, Chung IH, Jeong H, Kim BC.	Microbiol Resour Announc	10.1128/mra.01736-18	2019
	Comparative analysis of prebiotic effects of four oligosaccharides using in vitro gut model: digestibility, microbiome, and metabolome changes.	Cheon S, Kim G, Bae JH, Lee DH, Seong H, Kim DH, Han JS, Lim SY, Han NS.	FEMS Microbiol Ecol	10.1093/femsec/fiad002	2023
	Meirols A-C: Bioactive Catecholic Compounds from the Marine-Derived Fungus Meira sp. 1210CH-42.	Lee MA, Kang JS, Yang JW, Lee HS, Heo CS, Park SJ, Shin HJ.	Mar Drugs	10.3390/md22020087	2024
	Antibacterial Meroterpenoids, Merochlorins G-J from the Marine Bacterium Streptomyces sp.	Ryu MJ, Hillman PF, Lee J, Hwang S, Lee EY, Cha SS, Yang I, Oh DC, Nam SJ, Fenical W.	Mar Drugs	10.3390/md19110618	2021
Pathogenicity	Antimicrobial Activity of Divaricatic Acid Isolated from the Lichen Evernia mesomorpha against Methicillin-Resistant Staphylococcus aureus.	Oh JM, Kim YJ, Gang HS, Han J, Ha HH, Kim H.	Molecules	10.3390/molecules23123068	2018
	Application of Liposome Encapsulating Lactobacillus curvatus Extract in Cosmetic Emulsion Lotion.	Kim HT, Lee J, Jo YJ, Choi MJ.	Materials (Basel)	10.3390/ma14247571	2021
Pathogenicity	Antimicrobial and Antibiofilm Activities of Sulfated Polysaccharides from Marine Algae against Dental Plaque Bacteria.	Jun JY, Jung MJ, Jeong IH, Yamazaki K, Kawai Y, Kim BM.	Mar Drugs	10.3390/md16090301	2018
	Secondary Metabolites from Marine-Derived Bacillus: A Comprehensive Review of Origins, Structures, and Bioactivities.	Xiao S, Chen N, Chai Z, Zhou M, Xiao C, Zhao S, Yang X.	Mar Drugs	10.3390/md20090567	2022
	Advances on anticancer fungal metabolites: sources, chemical and biological activities in the last decade (2012-2023).	Evidente A.	Nat Prod Bioprospect	10.1007/s13659-024-00452-0	2024
Metabolism	Anti-Neuroinflammatory Agent, Restricticin B, from the Marine-Derived Fungus Penicillium janthinellum and Its Inhibitory Activity on the NO Production in BV-2 Microglia Cells.	Choi BK, Jo SH, Choi DK, Trinh PTH, Lee HS, Cao VA, Van TTT, Shin HJ.	Mar Drugs	10.3390/md18090465	2020
Pathogenicity	Putative probiotic Lactobacillus spp. from porcine gastrointestinal tract inhibit transmissible gastroenteritis coronavirus and enteric bacterial pathogens.	Kumar R, Seo BJ, Mun MR, Kim CJ, Lee I, Kim H, Park YH.	Trop Anim Health Prod	10.1007/s11250-010-9648-5	2010
	Genome-Wide Analysis of Oceanimonas sp. GK1 Isolated from Gavkhouni Wetland (Iran) Demonstrates Presence of Genes for Virulence and Pathogenicity.	Parsa Yeganeh L, Azarbaijani R, Mousavi H, Shahzadeh Fazeli SA, Amoozgar MA, Salekdeh GH.	Cell J	10.22074/cellj.2015.6	2015
	Species Distribution and Prevalence of Putative Virulence Factors in Mesophilic Aeromonas spp. Isolated from Fresh Retail Sushi.	Hoel S, Vadstein O, Jakobsen AN.	Front Microbiol	10.3389/fmicb.2017.00931	2017
	Thermostable and Alkalistable Xylanases Produced by the Thermophilic Bacterium Anoxybacillus flavithermus TWXYL3.	Ellis JT, Magnuson TS.	ISRN Microbiol	10.5402/2012/517524	2012
	Generation of subspecies level-specific microbial diagnostic microarrays using genes amplified from subtractive suppression hybridization as microarray probes.	Bae JW, Rhee SK, Nam YD, Park YH.	Nucleic Acids Res	10.1093/nar/gni112	2005
Metabolism	Unravelling the Identity, Metabolic Potential and Global Biogeography of the Atmospheric Methane-Oxidizing Upland Soil Cluster alpha.	Pratscher J, Vollmers J, Wiegand S, Dumont MG, Kaster AK.	Environ Microbiol	10.1111/1462-2920.14036	2018
	Preliminary probiotic and technological characterization of Pediococcus pentosaceus strain KID7 and in vivo assessment of its cholesterol-lowering activity.	Damodharan K, Lee YS, Palaniyandi SA, Yang SH, Suh JW.	Front Microbiol	10.3389/fmicb.2015.00768	2015
	An Innovative Approach Based on the Green Synthesis of Silver Nanoparticles Using Pomegranate Peel Extract for Antibacterial Purposes.	Diaz-Puertas R, Alvarez-Martinez FJ, Rodriguez-Canas E, Borras F, Valente AJM, Paixao JA, Falco A, Mallavia R.	Bioinorg Chem Appl	10.1155/bca/2009069	2025
	Assessment of a plasmid conjugation procedure to monitor horizontal transfer of an extended-spectrum beta-lactamase resistance gene under food chain scenarios.	Alvarez-Molina A, Trigal E, Prieto M, Lopez M, Alvarez-Ordonez A.	Curr Res Food Sci	10.1016/j.crfs.2022.11.024	2023
	Green Antimicrobials: Innovative Applications of Hops Extracts as Biocontrol Agents.	Paniagua-Garcia AI, Ibanez A, Diez-Antolinez R.	Pathogens	10.3390/pathogens14050418	2025
	Enhancing Polyphenol Delivery and Efficacy Using Functionalized Gold Nanoparticles: Antioxidant and Antibacterial Properties.	Bouaouz S, Chavez M, Pena Gonzalez CE, Rojas D, Escarpa A, Ortega P, Javier de la Mata F.	Bioinorg Chem Appl	10.1155/bca/3836765	2025
	Zinc(II) Iminopyridine Complexes as Antibacterial Agents: A Structure-to-Activity Study.	de la Mata Moratilla S, Casado Angulo S, Gomez-Casanova N, Copa-Patino JL, Heredero-Bermejo I, de la Mata FJ, Garcia-Gallego S.	Int J Mol Sci	10.3390/ijms25074011	2024
Pathogenicity	Antibacterial Action Mechanisms of Honey: Physiological Effects of Avocado, Chestnut, and Polyfloral Honey upon Staphylococcus aureus and Escherichia coli.	Combarros-Fuertes P, M Estevinho L, Teixeira-Santos R, G Rodrigues A, Pina-Vaz C, Fresno JM, Tornadijo ME.	Molecules	10.3390/molecules25051252	2020
	Evaluation of Physiological Effects Induced by Manuka Honey Upon Staphylococcus aureus and Escherichia coli.	Combarros-Fuertes P, Estevinho LM, Teixeira-Santos R, Rodrigues AG, Pina-Vaz C, Fresno JM, Tornadijo ME.	Microorganisms	10.3390/microorganisms7080258	2019
	Relevance of the Induced Stress Resistance When Identifying the Critical Microorganism for Microbial Risk Assessment.	Garre A, Egea JA, Iguaz A, Palop A, Fernandez PS.	Front Microbiol	10.3389/fmicb.2018.01663	2018
	Spectral imaging and nucleic acid mimics fluorescence in situ hybridization (SI-NAM-FISH) for multiplex detection of clinical pathogens.	Azevedo AS, Fernandes RM, Faria AR, Silvestre OF, Nieder JB, Lou C, Wengel J, Almeida C, Azevedo NF.	Front Microbiol	10.3389/fmicb.2022.976639	2022
	Bacteriocin Production by Escherichia coli during Biofilm Development.	Fokt H, Cleto S, Oliveira H, Araujo D, Castro J, Cerca N, Vieira MJ, Almeida C.	Foods	10.3390/foods11172652	2022
	Optimization of a Green Microwave-Assisted Extraction Method to Obtain Multifunctional Extracts of Mentha sp.	Garcia-Sarrio MJ, Sanz ML, Pala-Paul J, Diaz S, Soria AC.	Foods	10.3390/foods12102039	2023
	Selection for Antimicrobial Resistance in Foodborne Pathogens through Exposure to UV Light and Nonthermal Atmospheric Plasma Decontamination Techniques.	Alvarez-Molina A, de Toro M, Ruiz L, Lopez M, Prieto M, Alvarez-Ordonez A.	Appl Environ Microbiol	10.1128/aem.00102-20	2020
	A Phage Receptor-Binding Protein as a Promising Tool for the Detection of Escherichia coli in Human Specimens.	Costa SP, Cunha AP, Freitas PP, Carvalho CM.	Front Microbiol	10.3389/fmicb.2022.871855	2022
	Phytochemistry and Biological Activities of Essential Oils from Six Aromatic Medicinal Plants with Cosmetic Properties.	Ailli A, Handaq N, Touijer H, Gourich AA, Drioiche A, Zibouh K, Eddamsyry B, El Makhoukhi F, Mouradi A, Bin Jardan YA, Bourhia M, Elomri A, Zair T.	Antibiotics (Basel)	10.3390/antibiotics12040721	2023
	Antimicrobial efficacy of Lippia citriodora natural extract against Escherichia coli and Enterococcus faecalis in "Piel de Sapo" melon juice.	Rua J, Lopez-Rodriguez I, Sanz J, Del Valle Fernandez P, Garcia MDC, Garcia Armesto MR.	Food Sci Nutr	10.1002/fsn3.1260	2019
	Comparison of Primary Models to Predict Microbial Growth by the Plate Count and Absorbance Methods.	Pla ML, Oltra S, Esteban MD, Andreu S, Palop A.	Biomed Res Int	10.1155/2015/365025	2015
	Potential Nitrogen-Based Heterocyclic Compounds for Treating Infectious Diseases: A Literature Review.	Aatif M, Raza MA, Javed K, Nashre-Ul-Islam SM, Farhan M, Alam MW.	Antibiotics (Basel)	10.3390/antibiotics11121750	2022
	Study of the antimicrobial activity of cationic carbosilane dendrimers against clinical strains of multidrug-resistant bacteria and their biofilms.	Hernando-Gozalo M, Aguilera-Correa JJ, Rescalvo-Casas C, Seijas-Pereda L, Garcia-Bertolin C, de la Mata FJ, Sanchez-Nieves J, Cuadros J, Perez-Tanoira R.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1203991	2023
	Optimizing locked nucleic acid/2'-O-methyl-RNA fluorescence in situ hybridization (LNA/2'OMe-FISH) procedure for bacterial detection.	Azevedo AS, Sousa IM, Fernandes RM, Azevedo NF, Almeida C.	PLoS One	10.1371/journal.pone.0217689	2019
	Carotenoids from Persimmon (Diospyros kaki Thunb.) Byproducts Exert Photoprotective, Antioxidative and Microbial Anti-Adhesive Effects on HaCaT.	Gea-Botella S, Moreno-Chamba B, de la Casa L, Salazar-Bermeo J, Marti N, Martinez-Madrid MC, Valero M, Saura D.	Pharmaceutics	10.3390/pharmaceutics13111898	2021
	Antimicrobial Activity and Prevention of Bacterial Biofilm Formation of Silver and Zinc Oxide Nanoparticle-Containing Polyester Surfaces at Various Concentrations for Use.	Fontecha-Umana F, Rios-Castillo AG, Ripolles-Avila C, Rodriguez-Jerez JJ.	Foods	10.3390/foods9040442	2020
	Preparation and Characterization of New Liposomes. Bactericidal Activity of Cefepime Encapsulated into Cationic Liposomes.	Moya ML, Lopez-Lopez M, Lebron JA, Ostos FJ, Perez D, Camacho V, Beck I, Merino-Bohorquez V, Camean M, Madinabeitia N, Lopez-Cornejo P.	Pharmaceutics	10.3390/pharmaceutics11020069	2019
	Escherichia coli and Salmonella Enteritidis dual-species biofilms: interspecies interactions and antibiofilm efficacy of phages.	Milho C, Milho C, Silva MD, Alves D, Oliveira H, Sousa C, Pastrana LM, Azeredo J, Sillankorva S.	Sci Rep	10.1038/s41598-019-54847-y	2019
Pathogenicity	Antibacterial Effect of Carbosilane Metallodendrimers in Planktonic Cells of Gram-Positive and Gram-Negative Bacteria and Staphylococcus aureus Biofilm.	Llamazares C, Sanz Del Olmo N, Ortega P, Gomez R, Soliveri J, de la Mata FJ, Garcia-Gallego S, Copa-Patino JL.	Biomolecules	10.3390/biom9090405	2019
	High Heating Rates Affect Greatly the Inactivation Rate of Escherichia coli.	Huertas JP, Aznar A, Esnoz A, Fernandez PS, Iguaz A, Periago PM, Palop A.	Front Microbiol	10.3389/fmicb.2016.01256	2016
	Physico-Chemically Distinct Nanomaterials Synthesized from Derivates of a Poly(Anhydride) Diversify the Spectrum of Loadable Antibiotics.	Mira A, Sainz-Urruela C, Codina H, Jenkins SI, Rodriguez-Diaz JC, Mallavia R, Falco A.	Nanomaterials (Basel)	10.3390/nano10030486	2020
	Characterization, Bioactivity and Application of Chitosan-Based Nanoparticles in a Food Emulsion Model.	Oliveira Lima K, Barreto Pinilla CM, Aleman A, Lopez-Caballero ME, Gomez-Guillen MC, Montero P, Prentice C.	Polymers (Basel)	10.3390/polym13193331	2021
	Advances in bacteriophage-mediated strategies for combating polymicrobial biofilms.	Glizniewicz M, Milek D, Olszewska P, Czajkowski A, Serwin N, Cecerska-Heryc E, Dolegowska B, Grygorcewicz B.	Front Microbiol	10.3389/fmicb.2023.1320345	2023
	Antioxidant and Antibacterial Properties of Carbosilane Dendrimers Functionalized with Polyphenolic Moieties.	Sanz Del Olmo N, Pena Gonzalez CE, Rojas JD, Gomez R, Ortega P, Escarpa A, de la Mata FJ.	Pharmaceutics	10.3390/pharmaceutics12080698	2020
Stress	Effects of high pressure and mild heat on endogenous microflora and on the inactivation and sublethal injury of Escherichia coli inoculated into fruit juices and vegetable soup.	Munoz M, de Ancos B, Sanchez-Moreno C, Cano MP.	J Food Prot	10.4315/0362-028x-70.7.1587	2007
	Biosorption of Cr(VI) by three different bacterial species supported on granular activated carbon: a comparative study.	Quintelas C, Fernandes B, Castro J, Figueiredo H, Tavares T.	J Hazard Mater	10.1016/j.jhazmat.2007.09.027	2008
	Evaluation of Different Advanced Approaches to Simulation of Dynamic In Vitro Digestion of Polyphenols from Different Food Matrices-A Systematic Review.	Duque-Soto C, Quintriqueo-Cid A, Rueda-Robles A, Robert P, Borras-Linares I, Lozano-Sanchez J.	Antioxidants (Basel)	10.3390/antiox12010101	2022
	Physical and Antimicrobial Properties of Starch-PVA Blend Films as Affected by the Incorporation of Natural Antimicrobial Agents.	Cano A, Chafer M, Chiralt A, Gonzalez-Martinez C.	Foods	10.3390/foods5010003	2015
	Complexes of Pro-Apoptotic siRNAs and Carbosilane Dendrimers: Formation and Effect on Cancer Cells.	Krasheninina OA, Apartsin EK, Fuentes E, Szulc A, Ionov M, Venyaminova AG, Shcharbin D, de la Mata FJ, Bryszewska M, Gomez R.	Pharmaceutics	10.3390/pharmaceutics11010025	2019
	Immune-Mediated Mechanisms of Action of Probiotics and Synbiotics in Treating Pediatric Intestinal Diseases.	Plaza-Diaz J, Ruiz-Ojeda FJ, Gil-Campos M, Gil A.	Nutrients	10.3390/nu10010042	2018
	Evidence of the Anti-Inflammatory Effects of Probiotics and Synbiotics in Intestinal Chronic Diseases.	Plaza-Diaz J, Ruiz-Ojeda FJ, Vilchez-Padial LM, Gil A.	Nutrients	10.3390/nu9060555	2017
Biotechnology	PCR for detection of Shigella spp. in mayonnaise.	Villalobo E, Torres A.	Appl Environ Microbiol	10.1128/aem.64.4.1242-1245.1998	1998
	The live bacterial load and microbiota composition of prepacked "ready-to-eat" leafy greens during household conditions, with special reference to E. coli.	Uhlig E, Kjellstrom A, Oscarsson E, Nurminen N, Nabila Y, Paulsson J, Lupan T, Velpuri NSBP, Molin G, Hakansson A.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2022.109786	2022
	Microbial manipulation of the rat dam changes bacterial colonization and alters properties of the gut in her offspring.	Fak F, Ahrne S, Molin G, Jeppsson B, Westrom B.	Am J Physiol Gastrointest Liver Physiol	10.1152/ajpgi.00023.2007	2008
	Effects of household washing on bacterial load and removal of Escherichia coli from lettuce and "ready-to-eat" salads.	Uhlig E, Olsson C, He J, Stark T, Sadowska Z, Molin G, Ahrne S, Alsanius B, Hakansson A.	Food Sci Nutr	10.1002/fsn3.514	2017
	Intake of Blueberry Fermented by Lactobacillus plantarum Affects the Gut Microbiota of L-NAME Treated Rats.	Xu J, Ahren IL, Prykhodko O, Olsson C, Ahrne S, Molin G.	Evid Based Complement Alternat Med	10.1155/2013/809128	2013
Pathogenicity	Oral administration of live exopolysaccharide-producing Pediococcus parvulus, but not purified exopolysaccharide, suppressed Enterobacteriaceae without affecting bacterial diversity in ceca of mice.	Lindstrom C, Xu J, Oste R, Holst O, Molin G.	Appl Environ Microbiol	10.1128/aem.01456-13	2013
Metabolism	Efficacy of Lactiplantibacillus plantarum 299 and 299v against nosocomial oropharyngeal pathogens in vitro and as an oral prophylactic treatment in a randomized, controlled clinical trial.	Tranberg A, Klarin B, Johansson J, Pahlman LI.	Microbiologyopen	10.1002/mbo3.1151	2021
	Oral Administration of Heat-Killed Multi-Strain Probiotics Confers Durable Protection Against Antibiotic-Resistant Primary and Recurrent Urinary Tract Infections in a Murine Model.	Chen BY, Liu ZS, Lin YS, Lin HC, Chen PW.	Antibiotics (Basel)	10.3390/antibiotics14070634	2025
	Antimicrobial Potential of Bee-Derived Products: Insights into Honey, Propolis and Bee Venom	Grinn-Gofron A, Kolodziejczak M, Hrynkiewicz R, Lewandowski F, Bebnowska D, Adamski C, Niedzwiedzka-Rystwej P.	Pathogens		2025
	Scale-up production of and dietary supplementation with the recombinant antimicrobial peptide tilapia piscidin 4 to improve growth performance in Gallus gallus domesticus.	Tai HM, You MF, Lin CH, Tsai TY, Pan CY, Chen JY.	PLoS One	10.1371/journal.pone.0253661	2021
Metabolism	Dietary supplementation of recombinant antimicrobial peptide Epinephelus lanceolatus piscidin improves growth performance and immune response in Gallus gallus domesticus.	Tai HM, Huang HN, Tsai TY, You MF, Wu HY, Rajanbabu V, Chang HY, Pan CY, Chen JY.	PLoS One	10.1371/journal.pone.0230021	2020
	Physicochemical and Functional Properties of Snack Bars Enriched with Tilapia (Oreochromis niloticus) By-Product Powders.	Zulaikha Y, Yao SH, Chang YW.	Foods	10.3390/foods10081908	2021
	Fresh preservation of alfalfa sprouts and mushroom slices by soaking with thymol and resveratrol solutions.	Lai LJ, Chiu JM, Chiou RY.	Food Sci Nutr	10.1002/fsn3.458	2017
	Antibacterial and Antioxidant Activity of the Fruit of Macaranga tanarius, the Plant Origin of Taiwanese Green Propolis.	Chien YH, Yu YH, Ye SR, Chen YW.	Antioxidants (Basel)	10.3390/antiox11071242	2022
	Volatile Oils of Nepeta tenuifolia (Jing Jie) as an Alternative Medicine against Multidrug-Resistant Pathogenic Microbes.	Lee YH, Wang CM, Liu PY, Cheng CC, Wu ZY, Tseng SY, Tung KC.	Can J Infect Dis Med Microbiol	10.1155/2018/8347403	2018
	Evaluation of the Bioaerosol Inactivation Ability of Chitosan-Coated Antimicrobial Filters.	Hsu YF, Chuang CY, Yang S.	Int J Environ Res Public Health	10.3390/ijerph18137183	2021
	Optimization of a Portable Adenosine Triphosphate Bioluminescence Assay Coupled with a Receiver Operating Characteristic Model to Assess Bioaerosol Concentrations on Site.	Tseng CC, Lu YC, Chang KC, Hung CC.	Microorganisms	10.3390/microorganisms8070975	2020
Pathogenicity	Antibacterial and Antioxidant Capacities and Attenuation of Lipid Accumulation in 3T3-L1 Adipocytes by Low-Molecular-Weight Fucoidans Prepared from Compressional-Puffing-Pretreated Sargassum Crassifolium.	Huang CY, Kuo CH, Lee CH.	Mar Drugs	10.3390/md16010024	2018
	Removal of bioaerosols by the combination of a photocatalytic filter and negative air ions.	Yu KP, Lee GW, Lin SY, Huang CP.	J Aerosol Sci	10.1016/j.jaerosci.2007.12.005	2008
	Chitosonic^® Acid as a Novel Cosmetic Ingredient: Evaluation of its Antimicrobial, Antioxidant and Hydration Activities.	Lee SM, Liu KH, Liu YY, Chang YP, Lin CC, Chen YS.	Materials (Basel)	10.3390/ma6041391	2013
	Pharmaceutical Prospects of Bee Products: Special Focus on Anticancer, Antibacterial, Antiviral, and Antiparasitic Properties.	Nainu F, Masyita A, Bahar MA, Raihan M, Prova SR, Mitra S, Emran TB, Simal-Gandara J.	Antibiotics (Basel)	10.3390/antibiotics10070822	2021
	Four new members of the family Cytophagaceae: Chryseosolibacter histidini gen. nov., sp. nov., Chryseosolibacter indicus gen. nov., sp. nov., Dawidia cretensis, gen. nov., sp. nov., and Dawidia soli, gen. nov., sp. nov. isolated from diverse habitat.	Octaviana S, Lorenczyk S, Ackert F, Fenske L, Wink J.	Antonie Van Leeuwenhoek	10.1007/s10482-022-01756-2	2022
Phylogeny	Characterization of a novel root-associated diazotrophic rare PGPR taxa, Aquabacter pokkalii sp. nov., isolated from pokkali rice: new insights into the plant-associated lifestyle and brackish adaptation.	Sunithakumari VS, Menon RR, Suresh GG, Krishnan R, Rameshkumar N.	BMC Genomics	10.1186/s12864-024-10332-z	2024
Phylogeny	Escherichia marmotae sp. nov., isolated from faeces of Marmota himalayana.	Liu S, Jin D, Lan R, Wang Y, Meng Q, Dai H, Lu S, Hu S, Xu J.	Int J Syst Evol Microbiol	10.1099/ijs.0.000228	2015
Phylogeny	Colibacter massiliensis gen. nov. sp. nov., a novel Gram-stain-positive anaerobic diplococcal bacterium, isolated from the human left colon.	Anani H, Abdallah RA, Khoder M, Fontanini A, Mailhe M, Ricaboni D, Raoult D, Fournier PE.	Sci Rep	10.1038/s41598-019-53791-1	2019
Genetics	Alteromonas nitratireducens sp. nov., a Novel Nitrate-Reducing Bacterium Isolated from Marine Sediments, and the Evolution of Nitrate-Reducing Genes in the Genus Alteromonas	Chang Y, Li J, Wang X, Li Y, Cao Y, Duan X, Sun C, Chen C, Xu L.	Microorganisms		2025
Genetics	Bacillus ayatagriensis sp. nov., a novel plant growth-promoting rhizobacteria strain isolated from mulberry rhizosphere.	Das S, Mondal R, Mandal P, Kurt H, Chakraborty J, Islam MM, Sarkar B, Shaw S, Manna S, Arabaci N, Jangid K, Sadat A, Gangopadhyay D, Kati A, Mandal AK.	Sci Rep	10.1038/s41598-025-05508-w	2025
	Unprecedented Antimicrobial and Cytotoxic Polyketides from Cultures of Diaporthe africana sp. nov.	Matio Kemkuignou B, Lambert C, Stadler M, Kouam Fogue S, Marin-Felix Y.	J Fungi (Basel)	10.3390/jof9070781	2023
Genetics	Scandinavium goeteborgense gen. nov., sp. nov., a New Member of the Family Enterobacteriaceae Isolated From a Wound Infection, Carries a Novel Quinolone Resistance Gene Variant.	Marathe NP, Salva-Serra F, Karlsson R, Larsson DGJ, Moore ERB, Svensson-Stadler L, Jakobsson HE.	Front Microbiol	10.3389/fmicb.2019.02511	2019
Genetics	Comparative genomics of the Pseudomonas corrugata subgroup reveals high species diversity and allows the description of Pseudomonas ogarae sp. nov.	Garrido-Sanz D, Redondo-Nieto M, Martin M, Rivilla R.	Microb Genom	10.1099/mgen.0.000593	2021
Pathogenicity	Erwinia teleogrylli sp. nov., a Bacterial Isolate Associated with a Chinese Cricket.	Liu B, Luo J, Li W, Long XF, Zhang YQ, Zeng ZG, Tian YQ.	PLoS One	10.1371/journal.pone.0146596	2016
	Paenibacillus lutrae sp. nov., A Chitinolytic Species Isolated from A River Otter in Castril Natural Park, Granada, Spain.	Rodriguez M, Reina JC, Bejar V, Llamas I.	Microorganisms	10.3390/microorganisms7120637	2019
	Thiobacter aerophilum sp. nov., a Thermophilic, Obligately Chemolithoautotrophic, Sulfur-Oxidizing Bacterium from a Hot Spring and Proposal of Thiobacteraceae fam. nov.	Dukat AM, Elcheninov AG, Klyukina AA, Novikov AA, Frolov EN.	Microorganisms	10.3390/microorganisms12112252	2024

References

#9115	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 30083
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#38566	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66793	Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67772	The University of Coimbra Bacteria Culture Collection (UCCCB) ; Curators of the UCCCB;
#68368	Automatically annotated from API 20E .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#118688	Collection of Institut Pasteur ; Curators of the CIP; CIP 54.8
#124042	Johannes Wittmann, Clara Rolland, Lorenz Reimer, Joaquim Sardà: PhageDive .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Escherichia coli (DSM 30083, ATCC 11775, CCM 5172)

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