Escherichia coli E81186 is a facultative anaerobe, Gram-negative, motile human pathogen that was isolated from clinical specimen.
Gram-negative motile rod-shaped facultative anaerobe human pathogen genome sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 6743 | LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) | Medium recipe at MediaDive | Name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) Composition: Agar 20.0 g/l NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l Distilled water | ||
| 36445 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 118678 | CIP Medium 72 | Medium recipe at CIP |
| 118678 | Oxygen tolerancefacultative anaerobe |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 68368 | 28053 ChEBI | melibiose | + | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 118678 | 17632 ChEBI | nitrate | + | reduction | |
| 118678 | 16301 ChEBI | nitrite | + | reduction | |
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 68368 | 30911 ChEBI | sorbitol | - | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 118678 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68382 | esterase (C 4) | - | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 68368 | gelatinase | - | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 118678 | oxidase | - | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 118678 | urease | - | 3.5.1.5 | |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6743 | + | - | + | + | - | - | - | - | + | - | - | + | + | - | - | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 6743 | + | - | + | + | - | - | - | - | + | - | - | + | + | - | - | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | 50884_F01 assembly for Escherichia coli NCTC12900 | contig | 562 | 77.48 | ||||
| 66792 | ASM33505v2 assembly for Escherichia coli ATCC 700728 | contig | 1051353 | 53.39 | ||||
| 66792 | ASM61442v1 assembly for Escherichia coli JCM 18426 | contig | 1236522 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 75.80 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 72.50 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 64.30 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 76.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.75 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.45 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 87.95 | no |
| 125438 | aerobic | aerobicⓘ | no | 67.61 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.50 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 76.36 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Discrimination between pathogenic and non-pathogenic E. coli strains by means of Raman microspectroscopy. | Lorenz B, Ali N, Bocklitz T, Rosch P, Popp J. | Anal Bioanal Chem | 10.1007/s00216-020-02957-2 | 2020 | |
| The Lytic Siphophage vB_StyS-LmqsSP1 Reduces the Number of Salmonella enterica Serovar Typhimurium Isolates on Chicken Skin. | Shakeri G, Hammerl JA, Jamshidi A, Ghazvini K, Rohde M, Szabo I, Kehrenberg C, Plotz M, Kittler S. | Appl Environ Microbiol | 10.1128/aem.01424-21 | 2021 | ||
| Foodborne Lactic Acid Bacteria Inactivate Planktonic and Sessile Escherichia coli O157:H7 in a Meat Processing Environment: A Physiological and Proteomic Study. | Cisneros L, Baillo AA, Ploper D, Valacco MP, Moreno S, Yantorno O, Fusco V, Fadda S. | Foods | 10.3390/foods14213670 | 2025 | ||
| Nonculturable Escherichia coli O157 in horticultural compost: a public health concern. | Highmore C, Keevil CW. | Access Microbiol | 10.1099/acmi.0.001090.v4 | 2025 | ||
| Bacterial outer membrane vesicles provide an alternative pathway for trafficking of Escherichia coli O157 type III secreted effectors to epithelial cells. | Sirisaengtaksin N, O'Donoghue EJ, Jabbari S, Roe AJ, Krachler AM. | mSphere | 10.1128/msphere.00520-23 | 2023 | ||
| Genetics | Isolation, Characterization, and Comparative Genomic Analysis of Bacteriophage Ec_MI-02 from Pigeon Feces Infecting Escherichia coli O157:H7. | Sultan-Alolama MI, Amin A, Vijayan R, El-Tarabily KA. | Int J Mol Sci | 10.3390/ijms24119506 | 2023 | |
| Investigating enterohemorrhagic E. coli (O157:H7) in live sheep from Central Jordan: Prevalence and antibiotic sensitivity analysis. | Athamneh AA, Khaleel A, Ahmad L, Qaraqish R, Altaha AE, Khalaf H. | Open Vet J | 10.5455/ovj.2025.v15.i7.21 | 2025 | ||
| Effect of preliminary stresses on the induction of viable but non-culturable Escherichia coli O157:H7 NCTC 12900 and Staphylococcus aureus ATCC 6538 | Yang D, Zhao L, Rao L, Liao X. | Food Research International. | 2023 | |||
| Biogenic silver nanomaterials synthesized from Ocimum sanctum leaf extract exhibiting robust antimicrobial and anticancer activities: Exploring the therapeutic potential. | Ahmad N, Ansari MA, Al-Mahmeed A, Joji RM, Saeed NK, Shahid M. | Heliyon | 10.1016/j.heliyon.2024.e35486 | 2024 | ||
| Effect of preliminary stresses on the induction of viable but non-culturable Escherichia coli O157:H7 NCTC 12900 and Staphylococcus aureus ATCC 6538. | Yang D, Zhao L, Rao L, Liao X. | Food Res Int | 10.1016/j.foodres.2023.112710 | 2023 | ||
| Study of the Physicochemical and Phytochemical Parameters Together with Antibacterial Properties of Conventionally and Organically Cultivated Spirulina (Arthrospira platensis) in Greece. | Christodoulopoulou MA, Lazaridis DG, Simoni M, Intzirtzi E, Karabagias VK, Andritsos ND, Triantafyllidis V, Karabagias IK. | Life (Basel) | 10.3390/life15111761 | 2025 | ||
| Genetics | Characterization and Genomic Analysis of Escherichia coli O157:H7 Phage UAE_MI-01 Isolated from Birds. | Sultan-Alolama MI, Amin A, El-Tarabily KA, Vijayan R. | Int J Mol Sci | 10.3390/ijms232314846 | 2022 | |
| Effect of plasma-activated water against E. coli and S. aureus: Influence of organic matter and impact on skin cell viability. | Moiseienko Y, Shahbaz HM, Saad S, Avison MB, Stratakos AC. | Appl Microbiol Biotechnol | 10.1007/s00253-025-13635-7 | 2025 | ||
| Behaviour of Escherichia coli O157:H7 in raw and mild pasteurised donkey milk treated with high pressure | Dambrosio A, Capuozzo F, De Palo P, Mottola A, Storelli MM, De Rosa M, Matrella R, Quaglia NC. | Int Dairy J | 2023 | |||
| New Food Preservation candidate Zataria multiflora endrimer Synthesis and Antimicrobial Assessment. | Ghasemi R, Mehdikhani S, Khani M. | Arch Razi Inst | 10.32592/ari.2024.79.6.1287 | 2024 | ||
| Antitumor properties of traditional lactic acid bacteria: Short-chain fatty acid production and interleukin 12 induction. | Mobasherpour P, Yavarmanesh M, Edalatian Dovom MR. | Heliyon | 10.1016/j.heliyon.2024.e36183 | 2024 | ||
| GlnH, a Novel Antigen That Offers Partial Protection against Verocytotoxigenic Escherichia coli Infection. | Quinn C, Tomas-Cortazar J, Ofioritse O, Cosgrave J, Purcell C, McAloon C, Frost S, McClean S. | Vaccines (Basel) | 10.3390/vaccines11010175 | 2023 | ||
| Antimicrobial Effects and Antioxidant Activity of Myrtus communis L. Essential Oil in Beef Stored under Different Packaging Conditions. | Moura D, Vilela J, Saraiva S, Monteiro-Silva F, De Almeida JMMM, Saraiva C. | Foods | 10.3390/foods12183390 | 2023 | ||
| Antimicrobial Effects of Novel H2O2-Ag+ Complex on Membrane Damage to Staphylococcus aureus, Escherichia coli O157:H7, and Salmonella Typhimurium. | Han B, Han X, Ren M, You Y, Zhan J, Huang W. | J Food Prot | 10.4315/jfp-21-087 | 2022 | ||
| Effect of Antimicrobial Compounds on the Survival and Pathogenic Potential of Acid-Adapted Salmonella Enteritidis and Escherichia coli O157:H7 in Orange Juice. | Bainotti MB, Colas-Meda P, Vinas I, Alegre I. | Antibiotics (Basel) | 10.3390/antibiotics14040335 | 2025 | ||
| Flavonoids and Other Polyphenols: Bioactive Molecules from Traditional Medicine Recipes/Medicinal Plants and Their Potential for Phytopharmaceutical and Medical Application. | Intharuksa A, Kuljarusnont S, Sasaki Y, Tungmunnithum D. | Molecules | 10.3390/molecules29235760 | 2024 | ||
| Curcumin I-SMA nanomicelles as promising therapeutic tool to tackle bacterial infections. | Virzi NF, Fallica AN, Romeo G, Greish K, Alghamdi MA, Patane S, Mazzaglia A, Shahid M, Pittala V. | RSC Adv | 10.1039/d3ra04885c | 2023 | ||
| E. coli ST11 (O157:H7) does not encode a functional AcrF efflux pump. | Pugh HL, Connor C, Siasat P, McNally A, Blair JMA. | Microbiology (Reading) | 10.1099/mic.0.001324 | 2023 | ||
| A Cascaded RPA-SDA Amplification Strategy on a Sliding Microfluidic Chip for the Ultrasensitive and Rapid Detection of Shigella. | Zhou N, Fan G, Yang N, Xu T, Zhang Y, Xu W, Shang Y. | Foods | 10.3390/foods14223891 | 2025 | ||
| In vitro investigation of chemical composition and antibacterial activity of alcoholic, hydroalcoholic extracts, and essential oil of Spinacia oleracea leaves from Iran | Issazadeh SA, Hatami S, Yavarmanesh M. | Journal of food safety. | 10.1111/jfs.12891 | 2021 | ||
| Cold Plasma as a Revolutionary Antimicrobial Modality: A Multifaceted Weapon Against Antibiotic Resistance. | Mahmoud YA, Elkaliny NE, Elshikh FM, Ashraf Y, Metwally K, Yahya G, Sherif S. | Antibiotics (Basel) | 10.3390/antibiotics14090930 | 2025 | ||
| Evaluation of In Vitro Synergistic Effects of Tetracycline with Alkaloid-Related Compounds against Diarrhoeic Bacteria. | Osei-Owusu H, Rondevaldova J, Houdkova M, Kudera T, Needham T, Mascellani A, Kokoska L. | Int J Mol Sci | 10.3390/ijms25116038 | 2024 | ||
| Pathogenicity | Antimicrobial activity of MccJ25(G12Y) against gram-negative foodborne pathogens in vitro and in food models. | Corbalan N, Quiroga M, Masias E, Peralta D, Barros Velazquez J, Acuna L, Vincent P. | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2021.109267 | 2021 | |
| Bacteriocin Production by Escherichia coli during Biofilm Development. | Fokt H, Cleto S, Oliveira H, Araujo D, Castro J, Cerca N, Vieira MJ, Almeida C. | Foods | 10.3390/foods11172652 | 2022 | ||
| Conductometric Immunosensor for Escherichia coli O157:H7 Detection Based on Polyaniline/Zinc Oxide (PANI/ZnO) Nanocomposite. | Mutlaq S, Albiss B, Al-Nabulsi AA, Jaradat ZW, Olaimat AN, Khalifeh MS, Osaili T, Ayyash MM, Holley RA. | Polymers (Basel) | 10.3390/polym13193288 | 2021 | ||
| Biotechnology | Identification and characterization of lytic bacteriophages specific to foodborne pathogenic Escherichia coli O157:H7. | Yildirim Z, Sakin T, Akcelik M, Akcelik N. | Food Sci Technol Int | 10.1177/1082013220929836 | 2021 | |
| Detection of Listeria monocytogenes in Food Using the Proofman-LMTIA Assay. | Song C, Wang B, Wang Y, Liu J, Wang D. | Molecules | 10.3390/molecules28145457 | 2023 | ||
| Influence of pressurization rate and mode on cell damage of Escherichia coli and Staphyloccocus aureus by high hydrostatic pressure. | Yang D, Li R, Dong P, Rao L, Wang Y, Liao X. | Front Microbiol | 10.3389/fmicb.2023.1108194 | 2023 | ||
| The safety and efficacy of neutral electrolyzed water solution for wound irrigation: post-market clinical follow-up study. | Valdova V, Stepanova V, Lapcikova L. | Front Drug Saf Regul | 10.3389/fdsfr.2024.1402684 | 2024 | ||
| A Taguchi Approach for Optimization of Antimicrobial Effect of Whey Protein Based Edible Film Fermented by Bacillus clausii. | Khan AR, Sezer E, Aslan O, Cagri-Mehmetoglu A. | Polymers (Basel) | 10.3390/polym16233375 | 2024 | ||
| Behaviour of Escherichia coli O157:H7 and Listeria monocytogenes in Normal and DFD Beef of an Autochthonous Portuguese Breed. | Saraiva C, Saraiva S, Patarata L, da Conceicao Fontes M, Martins C. | Foods | 10.3390/foods12071420 | 2023 | ||
| Biotechnology | A ddPCR method for simultaneous detection and quantification of Salmonella enterica, Staphylococcus aureus, Listeria monocytogenes, and Bacillus cereus in foods | Sun X, Xiao J, Wei H, Chen K, Liang M, Huang Z, Lao J, Lin X, Zeng S. | Sci Rep | 2025 | ||
| Encapsulation of E. coli phage ZCEC5 in chitosan-alginate beads as a delivery system in phage therapy. | Abdelsattar AS, Abdelrahman F, Dawoud A, Connerton IF, El-Shibiny A. | AMB Express | 10.1186/s13568-019-0810-9 | 2019 | ||
| Evaluation and comparison of recombinase polymerase amplification coupled with lateral-flow bioassay for Escherichia coli O157:H7 detection using diifeerent genes. | Rani A, Ravindran VB, Surapaneni A, Shahsavari E, Haleyur N, Mantri N, Ball AS. | Sci Rep | 10.1038/s41598-021-81312-6 | 2021 | ||
| Simultaneous Detection of Salmonella typhimurium and Escherichia coli O157:H7 in Drinking Water and Milk with Mach-Zehnder Interferometers Monolithically Integrated on Silicon Chips. | Angelopoulou M, Petrou P, Misiakos K, Raptis I, Kakabakos S. | Biosensors (Basel) | 10.3390/bios12070507 | 2022 | ||
| Super-Fast Detection of Bacillus cereus by Combining Cellulose Filter Paper-Based DNA Extraction, Multienzyme Isothermal Rapid Amplification, and Lateral Flow Dipstick (MIRA-LFD). | Yi S, Zhou N, Ma Y, Yi L, Shang Y. | Foods | 10.3390/foods14030454 | 2025 | ||
| Phenolic Compounds from Pyrus communis Residues: Mechanisms of Antibacterial Action and Therapeutic Applications. | Ribeiro J, Silva V, Igrejas G, Barros L, Heleno SA, Reis FS, Poeta P. | Antibiotics (Basel) | 10.3390/antibiotics14030280 | 2025 | ||
| Bacteriophage-based nano-biosensors for the fast impedimetric determination of pathogens in food samples. | Abdelhamied N, Abdelrahman F, El-Shibiny A, Hassan RYA. | Sci Rep | 10.1038/s41598-023-30520-3 | 2023 | ||
| A New Duplex Recombinase Polymerase Amplification (D-RPA) Method for the Simultaneous and Rapid Detection of Shigella and Bacillus cereus in Food. | Xiang S, Zhang H, Cha X, Lin Y, Shang Y. | Foods | 10.3390/foods12091889 | 2023 | ||
| Transcriptome | Integrative Physiological and Transcriptome Analysis Reveals the Mechanism for the Repair of Sub-Lethally Injured Escherichia coli O157:H7 Induced by High Hydrostatic Pressure. | Hao JY, Lei YQ, Shi JY, Zhao WB, Gan ZL, Hu X, Sun AD. | Foods | 10.3390/foods11152377 | 2022 | |
| Biocidal Agents Used for Disinfection Can Enhance Antibiotic Resistance in Gram-Negative Species. | Kampf G. | Antibiotics (Basel) | 10.3390/antibiotics7040110 | 2018 | ||
| Diversity of the Microbiota of Traditional Izmir Tulum and Izmir Brined Tulum Cheeses and Selection of Potential Probiotics. | Guley Z, Fallico V, Cabrera-Rubio R, O'Sullivan D, Marotta M, Pennone V, Smith S, Beresford T. | Foods | 10.3390/foods12183482 | 2023 | ||
| Treatment of Clinically Important Bacteria With Cold Atmospheric Plasma. | Ding R, Song J, Huang X, Tan L, Rao X, Yang Y. | Microb Biotechnol | 10.1111/1751-7915.70219 | 2025 | ||
| Enzymology | Enumeration of Escherichia coli and determination of Salmonella spp. and verotoxigenic Escherichia coli in shellfish (Mytilus galloprovincialis and Ruditapes decussatus) harvested in Sardinia, Italy. | Lamon S, Piras F, Meloni D, Agus V, Porcheddu G, Pes M, Cambula MG, Esposito G, Fois F, Consolati SG, Mureddu A. | Ital J Food Saf | 10.4081/ijfs.2020.8625 | 2020 | |
| Control Measurements of Escherichia coli Biofilm: A Review. | Zhou F, Wang D, Hu J, Zhang Y, Tan BK, Lin S. | Foods | 10.3390/foods11162469 | 2022 | ||
| Genetics | Escherichia albertii as a Potential Enteropathogen in the Light of Epidemiological and Genomic Studies. | Leszczynska K, Swiecicka I, Daniluk T, Lebensztejn D, Chmielewska-Deptula S, Leszczynska D, Gawor J, Kliber M. | Genes (Basel) | 10.3390/genes14071384 | 2023 | |
| Assessing bacterial recovery and efficacy of cold atmospheric plasma treatments | Millan-Sango D, Han L, Milosavljevic V, Van Impe JF, Bourke P, Cullen PJ, Valdramidis VP. | Food and bioproducts processing : transactions of the Institution of Chemical Engineers, Part C. | 10.1016/j.fbp.2015.07.011 | 2015 | ||
| The interactions of bacteriophage Ace and Shiga toxin-producing Escherichia coli during biocontrol. | Pinto G, Minnich SA, Hovde CJ, Oliveira H, Smidt H, Almeida C, Azeredo J. | FEMS Microbiol Ecol | 10.1093/femsec/fiab105 | 2021 | ||
| Influence of Particle Size and Extraction Methods on Phenolic Content and Biological Activities of Pear Pomace. | Ferreira J, Tkacz K, Turkiewicz IP, Santos MI, Belas A, Lima A, Wojdylo A, Sousa I. | Foods | 10.3390/foods12234325 | 2023 | ||
| Mechanisms of Inactivation by High-Voltage Atmospheric Cold Plasma Differ for Escherichia coli and Staphylococcus aureus. | Han L, Patil S, Boehm D, Milosavljevic V, Cullen PJ, Bourke P. | Appl Environ Microbiol | 10.1128/aem.02660-15 | 2016 | ||
| The synergistic antibacterial activity of ozone and surfactant mists. | Epelle EI, Cojuhari N, Mohamedsalih A, Macfarlane A, Cusack M, Burns A, McGinness C, Yaseen M. | RSC Adv | 10.1039/d3ra03346e | 2023 | ||
| The Association of Cell Division Regulated by DicC With the Formation of Viable but Non-culturable Escherichia coli O157:H7. | Pan H, Dong K, Rao L, Zhao L, Wang Y, Liao X. | Front Microbiol | 10.3389/fmicb.2019.02850 | 2019 | ||
| Synergetic Inactivation Mechanism of Protocatechuic Acid and High Hydrostatic Pressure against Escherichia coli O157:H7. | Hao J, Lei Y, Gan Z, Zhao W, Shi J, Jia C, Sun A. | Foods | 10.3390/foods10123053 | 2021 | ||
| Preservatives from food-For food: Pea protein hydrolysate as a novel bio-preservative against Escherichia coli O157:H7 on a lettuce leaf. | Mohan NM, Zorgani A, Earley L, Chauhan S, Trajkovic S, Savage J, Adelfio A, Khaldi N, Martins M. | Food Sci Nutr | 10.1002/fsn3.2489 | 2021 | ||
| A Small Study of Bacterial Contamination of Anaerobic Digestion Materials and Survival in Different Feed Stocks. | Russell L, Whyte P, Zintl A, Gordon S, Markey B, de Waal T, Cummins E, Nolan S, O'Flaherty V, Abram F, Richards K, Fenton O, Bolton D. | Bioengineering (Basel) | 10.3390/bioengineering7030116 | 2020 | ||
| Alginate/Pectin Film Containing Extracts Isolated from Cranberry Pomace and Grape Seeds for the Preservation of Herring. | Urbonaviciute G, Dygle G, Cernauskas D, Sipailiene A, Venskutonis PR, Leskauskaite D. | Foods | 10.3390/foods12081678 | 2023 | ||
| Exploitation of SPR to Investigate the Importance of Glycan Chains in the Interaction between Lactoferrin and Bacteria. | O'Riordan N, Kilcoyne M, Joshi L, Hickey RM. | Sensors (Basel) | 10.3390/s17071515 | 2017 | ||
| Biocontrol Approaches against Escherichia coli O157:H7 in Foods. | Puligundla P, Lim S. | Foods | 10.3390/foods11050756 | 2022 | ||
| Butia odorata Barb. Rodr. extract inhibiting the growth of Escherichia coli in sliced mozzarella cheese. | Maia DSV, Haubert L, Dos Santos Soares K, de Fatima Rauber Wurfel S, da Silva WP. | J Food Sci Technol | 10.1007/s13197-019-03686-w | 2019 | ||
| The morphological and biological characteristics of a virulent PI phage isolated from slaughterhouse sewage in Shiraz, Iran. | Khalatbari-Limaki S, Hosseinzadeh S, Shekarforoush SS, Berizi E. | Iran J Microbiol | 10.18502/ijm.v12i6.5037 | 2020 | ||
| Conjugation Dynamics of Self-Transmissible and Mobilisable Plasmids into E. coli O157:H7 on Arabidopsis thaliana Rosettes. | Remus-Emsermann MNP, Aicher D, Pelludat C, Gisler P, Drissner D. | Antibiotics (Basel) | 10.3390/antibiotics10080928 | 2021 | ||
| Metabolism | Assessing the effects of exposure to environmental stress on some functional properties of Bifidobacterium animalis ssp. lactis. | Amund OD, Ouoba LI, Sutherland JP, Ghoddusi HB. | Benef Microbes | 10.3920/bm2013.0099 | 2014 | |
| Synergistic antimicrobial effects of activated lactoferrin and rosemary extract in vitro and potential application in meat storage. | Soyer F, Keman D, Eroglu E, Ture H. | J Food Sci Technol | 10.1007/s13197-020-04476-5 | 2020 | ||
| Evaluation of the microbiological and chemical aspects of autochthonous wild snails in Sardinia. | Coroneo V, Marras L, Giaccone V, Conficoni D, Brignardello SAS, Bissacco E, Trapella C, Alogna A, Gentili V, Parisi A, Loi F, Cappai S, Pisanu M, Cogoni MP. | Ital J Food Saf | 10.4081/ijfs.2022.10289 | 2022 | ||
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| The Effects of Freeze-Thaw and UVC Radiation on Microbial Survivability in a Selected Mars-like Environment. | Keaney D, Lucey B, Quinn N, Finn K. | Microorganisms | 10.3390/microorganisms10030576 | 2022 | ||
| Genetics | Complete genome sequencing and comparative genomic analysis of three donkey Streptococcus equi subsp. equi isolates. | Zhang Y, Lv F, Su Y, Zhang H, Zhang B. | Front Microbiol | 10.3389/fmicb.2023.1285027 | 2023 | |
| Metabolism | A Metabolite of Pseudomonas Triggers Prophage-Selective Lysogenic to Lytic Conversion in Staphylococcus aureus. | Jancheva M, Bottcher T. | J Am Chem Soc | 10.1021/jacs.1c01275 | 2021 | |
| Reduction of Bacterial Enteric Pathogens and Hygiene Indicator Bacteria on Tomato Skin Surfaces by a Polymeric Nanoparticle-Loaded Plant-Derived Antimicrobial. | Perez-Lewis KL, Yegin Y, Oh JK, Castillo A, Cisneros-Zevallos L, Kerth CR, Akbulut M, Taylor TM. | Microorganisms | 10.3390/microorganisms10020448 | 2022 | ||
| Enzymology | Viable but Nonculturable Escherichia coli O157:H7 and Salmonella enterica in Fresh Produce: Rapid Determination by Loop-Mediated Isothermal Amplification Coupled with a Propidium Monoazide Treatment. | Han L, Wang K, Ma L, Delaquis P, Bach S, Feng J, Lu X. | Appl Environ Microbiol | 10.1128/aem.02566-19 | 2020 | |
| Comparative examination of Escherichia coli O157:H7 survival on romaine lettuce and in soil at two independent experimental sites. | Bezanson G, Delaquis P, Bach S, McKellar R, Topp E, Gill A, Blais B, Gilmour M. | J Food Prot | 10.4315/0362-028x.jfp-11-306 | 2012 | ||
| Antimicrobial Resistance and CRISPR Typing Among Salmonella Isolates From Poultry Farms in China. | Li C, Wang Y, Gao Y, Li C, Ma B, Wang H. | Front Microbiol | 10.3389/fmicb.2021.730046 | 2021 | ||
| Structure and tailspike glycosidase machinery of ORF212 from E. coli O157:H7 phage CBA120 (TSP3). | Greenfield J, Shang X, Luo H, Zhou Y, Heselpoth RD, Nelson DC, Herzberg O. | Sci Rep | 10.1038/s41598-019-43748-9 | 2019 | ||
| Isolation and structure elucidation of phenazine derivative from Streptomyces sp. strain UICC B-92 isolated from Neesia altissima (Malvaceae). | Pratiwi RH, Hidayat I, Hanafi M, Mangunwardoyo W. | Iran J Microbiol | 10.18502/ijm.v12i2.2618 | 2020 | ||
| Improved assessments of bulk milk microbiota composition via sample preparation and DNA extraction methods. | Xue Z, Marco ML. | PLoS One | 10.1371/journal.pone.0267992 | 2022 | ||
| Studying Lipid Membrane Interactions of a Super-Cationic Peptide in Model Membranes and Living Bacteria. | Perez-Guillen I, Domenech O, Botet-Carreras A, Merlos A, Sierra JM, Albericio F, de la Torre BG, Montero MT, Vinas M, Borrell JH. | Pharmaceutics | 10.3390/pharmaceutics14102191 | 2022 | ||
| Pathogenicity | Effect of Lactobacillus acidophilus Fermented Broths Enriched with Eruca sativa Seed Extracts on Intestinal Barrier and Inflammation in a Co-Culture System of an Enterohemorrhagic Escherichia coli and Human Intestinal Cells. | Bonvicini F, Pagnotta E, Punzo A, Calabria D, Simoni P, Mirasoli M, Passerini N, Bertoni S, Ugolini L, Lazzeri L, Gentilomi GA, Caliceti C, Roda A. | Nutrients | 10.3390/nu12103064 | 2020 | |
| Pathogenicity | Effects of Polyethyelene Glycol-Desferrioxamine:Gallium Conjugates on Pseudomonas aeruginosa Outer Membrane Permeability and Vancomycin Potentiation. | Qiao J, Purro M, Liu Z, Xiong MP. | Mol Pharm | 10.1021/acs.molpharmaceut.0c00820 | 2021 | |
| Efficacy of Candida dubliniensis and Fungal beta-Glucans in Inducing Trained Innate Immune Protection Against Inducers of Sepsis. | Harriett AJ, Esher Righi S, Lilly EA, Fidel P, Noverr MC. | Front Cell Infect Microbiol | 10.3389/fcimb.2022.898030 | 2022 | ||
| Pathogenicity | Synergistic inactivation of bacteria based on a combination of low frequency, low-intensity ultrasound and a food grade antioxidant. | Nguyen Huu C, Rai R, Yang X, Tikekar RV, Nitin N. | Ultrason Sonochem | 10.1016/j.ultsonch.2021.105567 | 2021 | |
| A novel small RNA PhaS contributes to polymyxin B-heteroresistance in carbapenem-resistant Klebsiella pneumoniae. | Zhao Z, Yang T, Xiang G, Zhang S, Cai Y, Zhong G, Pu J, Shen C, Zeng J, Chen C, Huang B. | Emerg Microbes Infect | 10.1080/22221751.2024.2366354 | 2024 | ||
| Proteus mirabilis Vesicles Induce Mitochondrial Apoptosis by Regulating miR96-5p/Abca1 to Inhibit Osteoclastogenesis and Bone Loss. | Wang T, Mo L, Ou J, Fang Q, Wu H, Wu Y, Nandakumar KS. | Front Immunol | 10.3389/fimmu.2022.833040 | 2022 | ||
| Elucidating Escherichia Coli O157:H7 Colonization and Internalization in Cucumbers Using an Inverted Fluorescence Microscope and Hyperspectral Microscopy. | Sun Y, Wang D, Ma Y, Guan H, Liang H, Zhao X. | Microorganisms | 10.3390/microorganisms7110499 | 2019 | ||
| Apramycin resistance in epidemic carbapenem-resistant Klebsiella pneumoniae ST258 strains. | Hao M, Schuyler J, Zhang H, Shashkina E, Du H, Fouts DE, Satlin M, Kreiswirth BN, Chen L. | J Antimicrob Chemother | 10.1093/jac/dkab131 | 2021 | ||
| Pathogenicity | Emergence of Tigecycline Nonsusceptible and IMP-4 Carbapenemase-Producing K2-ST65 Hypervirulent Klebsiella pneumoniae in China. | Zhang Y, Wang X, Wang Q, Chen H, Li H, Wang S, Wang R, Wang H. | Microbiol Spectr | 10.1128/spectrum.01305-21 | 2021 | |
| Establishment of blood glycosidase activities and their excursions in sepsis. | Haslund-Gourley BS, Aziz PV, Heithoff DM, Restagno D, Fried JC, Ilse MB, Baumges H, Mahan MJ, Lubke T, Marth JD. | PNAS Nexus | 10.1093/pnasnexus/pgac113 | 2022 | ||
| Australian native Glycine clandestina seed microbiota hosts a more diverse bacterial community than the domesticated soybean Glycine max. | Chandel A, Mann R, Kaur J, Tannenbaum I, Norton S, Edwards J, Spangenberg G, Sawbridge T. | Environ Microbiome | 10.1186/s40793-022-00452-y | 2022 | ||
| Antimicrobial Biodegradable Food Packaging Based on Chitosan and Metal/Metal-Oxide Bio-Nanocomposites: A Review. | Babaei-Ghazvini A, Acharya B, Korber DR. | Polymers (Basel) | 10.3390/polym13162790 | 2021 | ||
| Pathways of thymidine hypermodification. | Lee YJ, Dai N, Muller SI, Guan C, Parker MJ, Fraser ME, Walsh SE, Sridar J, Mulholland A, Nayak K, Sun Z, Lin YC, Comb DG, Marks K, Gonzalez R, Dowling DP, Bandarian V, Saleh L, Correa IR, Weigele PR. | Nucleic Acids Res | 10.1093/nar/gkab781 | 2022 | ||
| Biotechnology | Antimicrobial Activity and Chemical Composition of "Kpètè-Kpètè": A Starter of Benin Traditional Beer Tchoukoutou. | N'tcha C, Sina H, Kayode AP, Gbenou JD, Baba-Moussa L. | Biomed Res Int | 10.1155/2017/6582038 | 2017 | |
| Pathogenicity | Synergism effects for Escherichia coli inactivation applying the combined ozone and chlorine disinfection method. | de Souza JB, Daniel LA. | Environ Technol | 10.1080/09593330.2010.537373 | 2011 | |
| Metabolism | Hospital effluent: A reservoir for carbapenemase-producing Enterobacterales? | Cahill N, O'Connor L, Mahon B, Varley A, McGrath E, Ryan P, Cormican M, Brehony C, Jolley KA, Maiden MC, Brisse S, Morris D. | Sci Total Environ | 10.1016/j.scitotenv.2019.03.428 | 2019 | |
| Enzymology | First report of Enterobacter hormaechei with respiratory disease in calves. | Wang Z, Duan L, Liu F, Hu Y, Leng C, Kan Y, Yao L, Shi H. | BMC Vet Res | 10.1186/s12917-019-2207-z | 2020 | |
| Investigation of Clostridium perfringens in small-scale commercial broiler flocks in Mymensingh district of Bangladesh. | Tresha AO, Arif M, Islam SS, Haque AKMZ, Rahman MT, Kabir SML. | Vet World | 10.14202/vetworld.2021.2809-2816 | 2021 | ||
| Characterization of two new strains of Lactococcus lactis for their probiotic efficacy over commercial synbiotics consortia. | Bandyopadhyay B, Das S, Mitra PK, Kundu A, Mandal V, Adhikary R, Mandal V, Mandal NC. | Braz J Microbiol | 10.1007/s42770-022-00685-6 | 2022 | ||
| Enzymology | Pathogen identification with laser-induced breakdown spectroscopy: the effect of bacterial and biofluid specimen contamination. | Mohaidat QI, Sheikh K, Palchaudhuri S, Rehse SJ. | Appl Opt | 10.1364/ao.51.000b99 | 2012 | |
| Fate of Escherichia coli O157:H7 in field-inoculated lettuce. | Moyne AL, Sudarshana MR, Blessington T, Koike ST, Cahn MD, Harris LJ. | Food Microbiol | 10.1016/j.fm.2011.02.001 | 2011 | ||
| Pathogenicity | Effect of Cessation of Ceftiofur and Substitution with Lincomycin-Spectinomycin on Extended-Spectrum-beta-Lactamase/AmpC Genes and Multidrug Resistance in Escherichia coli from a Canadian Broiler Production Pyramid. | Verrette L, Fairbrother JM, Boulianne M. | Appl Environ Microbiol | 10.1128/aem.00037-19 | 2019 | |
| Pathogenicity | Identification and Characterization of Conjugative Plasmids That Encode Ciprofloxacin Resistance in Salmonella. | Chen K, Dong N, Zhao S, Liu L, Li R, Xie M, Lin D, Wai-Chi Chan E, Meng J, McDermott PF, Chen S. | Antimicrob Agents Chemother | 10.1128/aac.00575-18 | 2018 | |
| Identification of Atypical Enteropathogenic Escherichia coli O98 from Golden Snub-Nosed Monkeys with Diarrhea in China. | Qi M, Wang Q, Tong S, Zhao G, Hu C, Chen Y, Li X, Yang W, Zhao Y, Platto S, Duncan RI, Chen J, Chen H, Guo A. | Front Vet Sci | 10.3389/fvets.2017.00217 | 2017 | ||
| LcCCL28-25, Derived from Piscine Chemokine, Exhibits Antimicrobial Activity against Gram-Negative and Gram-Positive Bacteria In Vitro and In Vivo. | Su J, Li H, Hu J, Wang D, Zhang F, Fu Z, Han F. | Microbiol Spectr | 10.1128/spectrum.02515-21 | 2022 | ||
| Metabolism | Plasma Proteome Signature of Sepsis: a Functionally Connected Protein Network. | Pimienta G, Heithoff DM, Rosa-Campos A, Tran M, Esko JD, Mahan MJ, Marth JD, Smith JW. | Proteomics | 10.1002/pmic.201800389 | 2019 | |
| Molecular characterization of Klebsiella pneumoniae isolates from stool specimens of outpatients in sentinel hospitals Beijing, China, 2010-2015. | Lu B, Zhou H, Zhang X, Qu M, Huang Y, Wang Q. | Gut Pathog | 10.1186/s13099-017-0188-7 | 2017 | ||
| Biotechnology | Phyllosphere microbiota composition and microbial community transplantation on lettuce plants grown indoors. | Williams TR, Marco ML. | mBio | 10.1128/mbio.01564-14 | 2014 | |
| Genomic characteristics of clinical multidrug-resistant Proteus isolates from a tertiary care hospital in southwest China. | Li Y, Liu Q, Qiu Y, Fang C, Zhou Y, She J, Chen H, Dai X, Zhang L. | Front Microbiol | 10.3389/fmicb.2022.977356 | 2022 | ||
| Pathogenicity | Prevalence and Molecular Characterization of mcr-1-Positive Salmonella Strains Recovered from Clinical Specimens in China. | Cui M, Zhang J, Gu Z, Li R, Chan EW, Yan M, Wu C, Xu X, Chen S. | Antimicrob Agents Chemother | 10.1128/aac.02471-16 | 2017 | |
| Difference of Phenotype and Genotype Between Human and Environmental: Isolated Vibrio cholerae in Surabaya, Indonesia. | Osawa K, Shigemura K, Kitagawa K, Kuntaman K, Mertaniasih NM, Setyarini W, Arizandy D, Rahadjo D, Osawa R, Shirakawa T, Fujisawa M. | Indian J Microbiol | 10.1007/s12088-020-00861-y | 2020 | ||
| Suppression of Escherichia coli O157:H7 by Dung Beetles (Coleoptera: Scarabaeidae) using the lowbush blueberry agroecosystem as a model system. | Jones MS, Tadepalli S, Bridges DF, Wu VC, Drummond F. | PLoS One | 10.1371/journal.pone.0120904 | 2015 | ||
| Spread of ST348 Klebsiella pneumoniae Producing NDM-1 in a Peruvian Hospital. | Pons MJ, Mari-Almirall M, Ymana B, Moya-Salazar J, Munoz L, Saune S, Salazar-Hernandez R, Vila J, Roca I. | Microorganisms | 10.3390/microorganisms8091392 | 2020 | ||
| Pathogenicity | Tolerance to disinfectants (chlorhexidine and isopropanol) and its association with antibiotic resistance in clinically-related Klebsiella pneumoniae isolates. | Morante J, Quispe AM, Ymana B, Moya-Salazar J, Luque N, Soza G, Ramos Chirinos M, Pons MJ. | Pathog Glob Health | 10.1080/20477724.2020.1845479 | 2021 | |
| Leaf Surface Topography Contributes to the Ability of Escherichia coli on Leafy Greens to Resist Removal by Washing, Escape Disinfection With Chlorine, and Disperse Through Splash. | Doan HK, Antequera-Gomez ML, Parikh AN, Leveau JHJ. | Front Microbiol | 10.3389/fmicb.2020.01485 | 2020 | ||
| Bio-preservation of ground beef meat by Enterococcus faecalis CECT7121. | Sparo MD, Confalonieri A, Urbizu L, Ceci M, Bruni SF. | Braz J Microbiol | 10.1590/s1517-83822013005000003 | 2013 | ||
| Pathogenicity | In Vitro Antibacterial Activity of Rhodanine Derivatives against Pathogenic Clinical Isolates. | AbdelKhalek A, Ashby CR, Patel BA, Talele TT, Seleem MN. | PLoS One | 10.1371/journal.pone.0164227 | 2016 | |
| Genetics | The Current Landscape of Antibiotic Resistance of Salmonella Infantis in Italy: The Expansion of Extended-Spectrum Beta-Lactamase Producers on a Local Scale. | Di Marcantonio L, Romantini R, Marotta F, Chiaverini A, Zilli K, Abass A, Di Giannatale E, Garofolo G, Janowicz A. | Front Microbiol | 10.3389/fmicb.2022.812481 | 2022 | |
| Antioxidant, antimicrobial, and antiproliferative activity-based comparative study of peel and flesh polyphenols from Actinidia chinensis. | Alim A, Li T, Nisar T, Ren D, Zhai X, Pang Y, Yang X. | Food Nutr Res | 10.29219/fnr.v63.1577 | 2019 | ||
| Pathogenicity | Thymus vulgaris L. Essential Oil Solid Formulation: Chemical Profile and Spasmolytic and Antimicrobial Effects. | Micucci M, Protti M, Aldini R, Frosini M, Corazza I, Marzetti C, Mattioli LB, Tocci G, Chiarini A, Mercolini L, Budriesi R. | Biomolecules | 10.3390/biom10060860 | 2020 | |
| Draft Genome Sequence of Escherichia coli Strain ATCC 23502 (Serovar O5:K4:H4). | Cress BF, Greene ZR, Linhardt RJ, Koffas MA. | Genome Announc | 10.1128/genomea.00046-13 | 2013 | ||
| Draft Genome Sequence of Escherichia coli Strain ATCC 23506 (Serovar O10:K5:H4). | Cress BF, Greene ZR, Linhardt RJ, Koffas MA. | Genome Announc | 10.1128/genomea.00049-13 | 2013 | ||
| One Hundred Faces of Geraniol. | Maczka W, Winska K, Grabarczyk M. | Molecules | 10.3390/molecules25143303 | 2020 | ||
| Pathogenicity | Breeding Crops for Enhanced Food Safety. | Melotto M, Brandl MT, Jacob C, Jay-Russell MT, Micallef SA, Warburton ML, Van Deynze A. | Front Plant Sci | 10.3389/fpls.2020.00428 | 2020 | |
| Genetic Characterization of bla CTX-M-55 -Bearing Plasmids Harbored by Food-Borne Cephalosporin-Resistant Vibrio parahaemolyticus Strains in China. | Zheng Z, Li R, Ye L, Wai-Chi Chan E, Xia X, Chen S. | Front Microbiol | 10.3389/fmicb.2019.01338 | 2019 | ||
| Genetics | Analysis of Yersinia pseudotuberculosis Isolates Recovered from Deceased Mammals of a German Zoo Animal Collection. | Hammerl JA, Vom Ort N, Barac A, Jackel C, Grund L, Dreyer S, Heydel C, Kuczka A, Peters H, Hertwig S. | J Clin Microbiol | 10.1128/jcm.03125-20 | 2021 | |
| Ebselen: A Promising Repurposing Drug to Treat Infections Caused by Multidrug-Resistant Microorganisms. | Alves de Lima E Silva A, Rio-Tinto A. | Interdiscip Perspect Infect Dis | 10.1155/2024/9109041 | 2024 | ||
| Transmission of extended-spectrum cephalosporin-resistant Salmonella harboring a blaCMY-2-carrying IncA/C2 plasmid chromosomally integrated by ISEcp1 or IS26 in layer breeding chains in Japan. | Shigemura H, Maeda T, Nakayama S, Ohishi A, Carle Y, Ookuma E, Etoh Y, Hirai S, Matsui M, Kimura H, Sekizuka T, Kuroda M, Sera N, Inoshima Y, Murakami K. | J Vet Med Sci | 10.1292/jvms.21-0085 | 2021 | ||
| Pathogenicity | Genetic elements associated with antimicrobial resistance among avian pathogenic Escherichia coli. | Awad A, Arafat N, Elhadidy M. | Ann Clin Microbiol Antimicrob | 10.1186/s12941-016-0174-9 | 2016 | |
| Electropositive Nanodiamond-Coated Quartz Microfiber Membranes for Virus and Dye Filtration. | Bland HA, Centeleghe IA, Mandal S, Thomas ELH, Maillard JY, Williams OA. | ACS Appl Nano Mater | 10.1021/acsanm.1c00439 | 2021 | ||
| Molecular Epidemiology of Extended-Spectrum beta-Lactamase-Producing Escherichia coli Pathotypes in Diarrheal Children from Low Socioeconomic Status Communities in Bihar, India: Emergence of the CTX-M Type. | Mandal A, Sengupta A, Kumar A, Singh UK, Jaiswal AK, Das P, Das S. | Infect Dis (Auckl) | 10.1177/1178633617739018 | 2017 | ||
| Environmental inactivation and irrigation-mediated regrowth of Escherichia coli O157:H7 on romaine lettuce when inoculated in a fecal slurry matrix. | Chase JA, Partyka ML, Bond RF, Atwill ER. | PeerJ | 10.7717/peerj.6591 | 2019 | ||
| Metabolism | The influence of surface chemistry on the kinetics and thermodynamics of bacterial adhesion. | Oh JK, Yegin Y, Yang F, Zhang M, Li J, Huang S, Verkhoturov SV, Schweikert EA, Perez-Lewis K, Scholar EA, Taylor TM, Castillo A, Cisneros-Zevallos L, Min Y, Akbulut M. | Sci Rep | 10.1038/s41598-018-35343-1 | 2018 | |
| Antibiofilm Effect of Poly(Vinyl Alcohol-co-Ethylene) Halamine Film against Listeria innocua and Escherichia coli O157:H7. | Cossu A, Si Y, Sun G, Nitin N. | Appl Environ Microbiol | 10.1128/aem.00975-17 | 2017 | ||
| Rapid and cost-effective evaluation of bacterial viability using fluorescence spectroscopy. | Ou F, McGoverin C, Swift S, Vanholsbeeck F. | Anal Bioanal Chem | 10.1007/s00216-019-01848-5 | 2019 | ||
| Genetics | Accessory Genomic Epidemiology of Cocirculating Acinetobacter baumannii Clones. | Mateo-Estrada V, Fernandez-Vazquez JL, Moreno-Manjon J, Hernandez-Gonzalez IL, Rodriguez-Noriega E, Morfin-Otero R, Alcantar-Curiel MD, Castillo-Ramirez S. | mSystems | 10.1128/msystems.00626-21 | 2021 | |
| Stress | Synergistic Antimicrobial Activity by Light or Thermal Treatment and Lauric Arginate: Membrane Damage and Oxidative Stress. | Yang X, Rai R, Huu CN, Nitin N. | Appl Environ Microbiol | 10.1128/aem.01033-19 | 2019 | |
| Profiling, isolation and characterisation of beneficial microbes from the seed microbiomes of drought tolerant wheat. | Hone H, Mann R, Yang G, Kaur J, Tannenbaum I, Li T, Spangenberg G, Sawbridge T. | Sci Rep | 10.1038/s41598-021-91351-8 | 2021 | ||
| Bacterial Diversity and Antibiotic Susceptibility of Sparus aurata from Aquaculture. | Salgueiro V, Manageiro V, Bandarra NM, Reis L, Ferreira E, Canica M. | Microorganisms | 10.3390/microorganisms8091343 | 2020 | ||
| Characterization of autochthonous lactobacilli from goat dairy products with probiotic potential for metabolic diseases. | Marquez A, Andrada E, Russo M, Bolondi ML, Fabersani E, Medina R, Gauffin-Cano P. | Heliyon | 10.1016/j.heliyon.2022.e10462 | 2022 | ||
| Indigenous Probiotic Lactobacillus Isolates Presenting Antibiotic like Activity against Human Pathogenic Bacteria. | Halder D, Mandal M, Chatterjee SS, Pal NK, Mandal S. | Biomedicines | 10.3390/biomedicines5020031 | 2017 | ||
| Pathogenicity | Spread of Carbapenem-Resistant Klebsiella pneumoniae in an Intensive Care Unit: A Whole-Genome Sequence-Based Prospective Observational Study. | Wei L, Wu L, Wen H, Feng Y, Zhu S, Liu Y, Tang L, Doughty E, van Schaik W, McNally A, Zong Z. | Microbiol Spectr | 10.1128/spectrum.00058-21 | 2021 | |
| Competitive Transmission of Carbapenem-Resistant Klebsiella pneumoniae in a Newly Opened Intensive Care Unit. | Hu Y, Zhang H, Wei L, Feng Y, Wen H, Li J, Zhang Z, Yang Y, Moran RA, McNally A, Zong Z. | mSystems | 10.1128/msystems.00799-22 | 2022 | ||
| Comparison of the antimicrobial activity of propolis extracts obtained by means of various extraction methods. | Pobiega K, Krasniewska K, Derewiaka D, Gniewosz M. | J Food Sci Technol | 10.1007/s13197-019-04009-9 | 2019 | ||
| Biotechnology | Antimicrobial Particle-Based Novel Sanitizer for Enhanced Decontamination of Fresh Produce. | Huang K, Nitin N. | Appl Environ Microbiol | 10.1128/aem.02599-18 | 2019 | |
| Structure and properties of slow-resorbing nanofibers obtained by (co-axial) electrospinning as tissue scaffolds in regenerative medicine. | Hudecki A, Gola J, Ghavami S, Skonieczna M, Markowski J, Likus W, Lewandowska M, Maziarz W, Los MJ. | PeerJ | 10.7717/peerj.4125 | 2017 | ||
| Production of Bacterial Exopolysaccharides: Xanthan and Bacterial Cellulose. | Revin VV, Liyaskina EV, Parchaykina MV, Kurgaeva IV, Efremova KV, Novokuptsev NV. | Int J Mol Sci | 10.3390/ijms241914608 | 2023 | ||
| Detection of Aminoglycoside Resistant Bacteria in Sludge Samples From Norwegian Drinking Water Treatment Plants. | Ullmann IF, Tunsjo HS, Andreassen M, Nielsen KM, Lund V, Charnock C. | Front Microbiol | 10.3389/fmicb.2019.00487 | 2019 | ||
| Antibacterial and Antioxidant Activities of Essential Oils from Artemisia herba-alba Asso., Pelargonium capitatum × radens and Laurus nobilis L. | Rafiq R, Hayek SA, Anyanwu U, Hardy BI, Giddings VL, Ibrahim SA, Tahergorabi R, Kang HW. | Foods | 10.3390/foods5020028 | 2016 | ||
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| Serogroups, and drug resistance of nontyphoidal Salmonella in symptomatic patients with community-acquired diarrhea and chicken meat samples in Tehran. | Besharati S, Sadeghi A, Ahmadi F, Tajeddin E, Mohammad Salehi R, Fani F, Pouladfar G, Nikmanesh B, Majidpour A, Soleymanzadeh Moghadam S, Mirab Samiee S, Rahnamaye Farzami M, Rahbar M, Eslami P, Rakhshani N, Eshrati B, Gouya MM, Fallah F, Karimi A, Owlia P, Alebouyeh M. | Iran J Vet Res | 2020 | |||
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| Survival of Escherichia coli in Manure-Amended Soils Is Affected by Spatiotemporal, Agricultural, and Weather Factors in the Mid-Atlantic United States. | Sharma M, Millner PD, Hashem F, Vinyard BT, East CL, Handy ET, White K, Stonebraker R, Cotton CP. | Appl Environ Microbiol | 10.1128/aem.02392-18 | 2019 | ||
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| Distinct mechanisms of acquisition of mcr-1 -bearing plasmid by Salmonella strains recovered from animals and food samples. | Cui M, Zhang J, Zhang C, Li R, Wai-Chi Chan E, Wu C, Wu C, Chen S. | Sci Rep | 10.1038/s41598-017-01810-4 | 2017 | ||
| Antibacterial and Antioxidant Properties of the Leaves and Stem Essential Oils of Jatropha gossypifolia L. | Okoh SO, Iweriebor BC, Okoh OO, Nwodo UU, Okoh AI. | Biomed Res Int | 10.1155/2016/9392716 | 2016 | ||
| Surrogate strains of human pathogens for field release. | Park S, Kim CH, Jeong ST, Lee SY. | Bioengineered | 10.1080/21655979.2017.1349044 | 2018 | ||
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| Biotechnology | Growth Biocontrol of Foodborne Pathogens and Spoilage Microorganisms of Food by Polish Propolis Extracts. | Pobiega K, Krasniewska K, Przybyl JL, Baczek K, Zubernik J, Witrowa-Rajchert D, Gniewosz M. | Molecules | 10.3390/molecules24162965 | 2019 | |
| Antibiogram Profile of Salmonella enterica Serovar Typhi in India - A Two Year Study. | Kumar Y, Sharma A, Mani KR. | Trop Life Sci Res | 2013 | |||
| Recent biotechnological interventions for developing improved penicillin G acylases. | Rajendhran J, Gunasekaran P. | J Biosci Bioeng | 10.1016/s1389-1723(04)70157-7 | 2004 | ||
| Pathogenicity | Antibiotic resistance and molecular characterization of the hydrogen sulfide-negative phenotype among diverse Salmonella serovars in China. | Xie J, Wu F, Xu X, Yang X, Zhao R, Ma Q, Li P, Wang L, Hao R, Jia L, Du X, Qiu S, Song H. | BMC Infect Dis | 10.1186/s12879-018-3209-3 | 2018 | |
| Is There Potential for Repurposing Statins as Novel Antimicrobials? | Hennessy E, Adams C, Reen FJ, O'Gara F. | Antimicrob Agents Chemother | 10.1128/aac.00192-16 | 2016 | ||
| Clonal Expansion of Biofilm-Forming Salmonella Typhimurium ST34 with Multidrug-Resistance Phenotype in the Southern Coastal Region of China. | Li W, Li Y, Liu Y, Shi X, Jiang M, Lin Y, Qiu Y, Zhang Q, Chen Q, Zhou L, Sun Q, Hu Q. | Front Microbiol | 10.3389/fmicb.2017.02090 | 2017 | ||
| Molecular characterization of antimicrobial resistant non-typhoidal Salmonella from poultry industries in Korea. | Kim JE, Lee YJ. | Ir Vet J | 10.1186/s13620-017-0095-8 | 2017 | ||
| Genetics | Targeted Metagenomics for Clinical Detection and Discovery of Bacterial Tick-Borne Pathogens. | Kingry L, Sheldon S, Oatman S, Pritt B, Anacker M, Bjork J, Neitzel D, Strain A, Berry J, Sloan L, Respicio-Kingry L, Dietrich E, Bloch K, Moncayo A, Srinivasamoorthy G, Hu B, Hinckley A, Mead P, Kugeler K, Petersen J. | J Clin Microbiol | 10.1128/jcm.00147-20 | 2020 | |
| Pathogenicity | Antibacterial activity and mechanism of action of auranofin against multi-drug resistant bacterial pathogens. | Thangamani S, Mohammad H, Abushahba MF, Sobreira TJ, Hedrick VE, Paul LN, Seleem MN. | Sci Rep | 10.1038/srep22571 | 2016 | |
| Pathogenicity | In Vitro Activity of Sulbactam-Durlobactam against Acinetobacter baumannii-calcoaceticus Complex Isolates Collected Globally in 2016 and 2017. | McLeod SM, Moussa SH, Hackel MA, Miller AA. | Antimicrob Agents Chemother | 10.1128/aac.02534-19 | 2020 | |
| Incidence and Characterization of Salmonella Isolates From Raw Meat Products Sold at Small Markets in Hubei Province, China. | Zhou M, Li X, Hou W, Wang H, Paoli GC, Shi X. | Front Microbiol | 10.3389/fmicb.2019.02265 | 2019 | ||
| Enzymology | PFGE genotyping and molecular characterization of Campylobacter spp. isolated from chicken meat. | Bakhshi B, Kalantar M, Rastegar-Lari A, Fallah F. | Iran J Vet Res | 2016 | ||
| Enzymology | Genome sequence of Shigella flexneri strain SP1, a diarrheal isolate that encodes an extended-spectrum beta-lactamase (ESBL). | Shen P, Fan J, Guo L, Li J, Li A, Zhang J, Ying C, Ji J, Xu H, Zheng B, Xiao Y. | Ann Clin Microbiol Antimicrob | 10.1186/s12941-017-0212-2 | 2017 | |
| Enzymology | Phenotypic and genetic characterization of Vibrio cholerae O1 isolated from various regions of Kenya between 2007 and 2010. | Mercy N, Mohamed AA, Zipporah N, Chowdhury G, Pazhani GP, Ramamurthy T, Boga HI, Kariuki SM, Joseph O. | Pan Afr Med J | 10.11604/pamj.2014.19.8.2496 | 2014 | |
| Genetics | Assembly and Characterization of a Pathogen Strain Collection for Produce Safety Applications: Pre-growth Conditions Have a Larger Effect on Peroxyacetic Acid Tolerance Than Strain Diversity. | Harrand AS, Kovac J, Carroll LM, Guariglia-Oropeza V, Kent DJ, Wiedmann M. | Front Microbiol | 10.3389/fmicb.2019.01223 | 2019 | |
| Influence of Vacuum Cooling on Escherichia coli O157:H7 Infiltration in Fresh Leafy Greens via a Multiphoton-Imaging Approach. | Vonasek E, Nitin N. | Appl Environ Microbiol | 10.1128/aem.02327-15 | 2016 | ||
| Metabolism | Effect of long-term starvation on the survival, recovery, and carbon utilization profiles of a bovine Escherichia coli O157:H7 isolate from New Zealand. | Xavier RN, Morgan HW, McDonald IR, Withers H. | Appl Environ Microbiol | 10.1128/aem.00045-14 | 2014 | |
| Crystal structure of ORF210 from E. coli O157:H1 phage CBA120 (TSP1), a putative tailspike protein. | Chen C, Bales P, Greenfield J, Heselpoth RD, Nelson DC, Herzberg O. | PLoS One | 10.1371/journal.pone.0093156 | 2014 | ||
| Pathogenicity | Enhanced Antimicrobial Activity Based on a Synergistic Combination of Sublethal Levels of Stresses Induced by UV-A Light and Organic Acids. | de Oliveira EF, Cossu A, Tikekar RV, Nitin N. | Appl Environ Microbiol | 10.1128/aem.00383-17 | 2017 | |
| Pathogenicity | In Vitro activities of combinations of rifampin with other antimicrobials against multidrug-resistant Acinetobacter baumannii. | Bai Y, Liu B, Wang T, Cai Y, Liang B, Wang R, Liu Y, Wang J. | Antimicrob Agents Chemother | 10.1128/aac.04089-14 | 2015 | |
| Unique Clones of Vibrio cholerae O1 El Tor with Haitian Type ctxB Allele Implicated in the Recent Cholera Epidemics from Nigeria, Africa. | Adewale AK, Pazhani GP, Abiodun IB, Afolabi O, Kolawole OD, Mukhopadhyay AK, Ramamurthy T. | PLoS One | 10.1371/journal.pone.0159794 | 2016 | ||
| Biotechnology | Frequency, Antimicrobial Resistance and Genetic Diversity of Klebsiella pneumoniae in Food Samples. | Guo Y, Zhou H, Qin L, Pang Z, Qin T, Ren H, Pan Z, Zhou J. | PLoS One | 10.1371/journal.pone.0153561 | 2016 | |
| Metabolism | Effects of irradiation dose and O(2) and CO(2) concentrations in packages on foodborne pathogenic bacteria and quality of ready-to-cook seasoned ground beef product (meatball) during refrigerated storage. | Gunes G, Yilmaz N, Ozturk A. | ScientificWorldJournal | 10.1100/2012/274219 | 2012 | |
| Phylogeny | Impact of DNA Sequencing and Analysis Methods on 16S rRNA Gene Bacterial Community Analysis of Dairy Products. | Xue Z, Kable ME, Marco ML. | mSphere | 10.1128/msphere.00410-18 | 2018 | |
| Metabolism | Pyrophosphate-Dependent ATP Formation from Acetyl Coenzyme A in Syntrophus aciditrophicus, a New Twist on ATP Formation. | James KL, Rios-Hernandez LA, Wofford NQ, Mouttaki H, Sieber JR, Sheik CS, Nguyen HH, Yang Y, Xie Y, Erde J, Rohlin L, Karr EA, Loo JA, Ogorzalek Loo RR, Hurst GB, Gunsalus RP, Szweda LI, McInerney MJ. | mBio | 10.1128/mbio.01208-16 | 2016 | |
| Transcriptome | Meta-analysis of data from spaceflight transcriptome experiments does not support the idea of a common bacterial "spaceflight response". | Morrison MD, Nicholson WL. | Sci Rep | 10.1038/s41598-018-32818-z | 2018 | |
| Genetics | Prevalence and molecular characterization of Salmonella enterica isolates throughout an integrated broiler supply chain in China. | Ren X, Li M, Xu C, Cui K, Feng Z, Fu Y, Zhang J, Liao M. | Epidemiol Infect | 10.1017/s0950268816001515 | 2016 | |
| Pathogenicity | Repurposing Clinical Molecule Ebselen to Combat Drug Resistant Pathogens. | Thangamani S, Younis W, Seleem MN. | PLoS One | 10.1371/journal.pone.0133877 | 2015 | |
| Pathogenicity | Evaluation of Ceftaroline Alone and in Combination against Biofilm-Producing Methicillin-Resistant Staphylococcus aureus with Reduced Susceptibility to Daptomycin and Vancomycin in an In Vitro Pharmacokinetic/Pharmacodynamic Model. | Barber KE, Smith JR, Ireland CE, Boles BR, Rose WE, Rybak MJ. | Antimicrob Agents Chemother | 10.1128/aac.00386-15 | 2015 | |
| Conjugative IncFI plasmids carrying CTX-M-15 among Escherichia coli ESBL producing isolates at a University hospital in Germany. | Mshana SE, Imirzalioglu C, Hossain H, Hain T, Domann E, Chakraborty T. | BMC Infect Dis | 10.1186/1471-2334-9-97 | 2009 | ||
| Pathogenicity | Cu Nanoparticles Have Different Impacts in Escherichia coli and Lactobacillus brevis than Their Microsized and Ionic Analogues. | Kaweeteerawat C, Chang CH, Roy KR, Liu R, Li R, Toso D, Fischer H, Ivask A, Ji Z, Zink JI, Zhou ZH, Chanfreau GF, Telesca D, Cohen Y, Holden PA, Nel AE, Godwin HA. | ACS Nano | 10.1021/acsnano.5b02021 | 2015 | |
| Reprocessing of side-streams towards obtaining valuable bacterial metabolites. | Piwowarek K, Lipinska E, Kieliszek M. | Appl Microbiol Biotechnol | 10.1007/s00253-023-12458-8 | 2023 | ||
| Pathogenicity | Dissemination of blaOXA-23 in Acinetobacter spp. in China: main roles of conjugative plasmid pAZJ221 and transposon Tn2009. | Liu LL, Ji SJ, Ruan Z, Fu Y, Fu YQ, Wang YF, Yu YS. | Antimicrob Agents Chemother | 10.1128/aac.04574-14 | 2015 | |
| Pathogenicity | Antimicrobial Susceptibility of Bordetella bronchiseptica Isolates from Swine and Companion Animals and Detection of Resistance Genes. | Pruller S, Rensch U, Meemken D, Kaspar H, Kopp PA, Klein G, Kehrenberg C. | PLoS One | 10.1371/journal.pone.0135703 | 2015 | |
| Biotechnology | First detection of AmpC beta-lactamase bla(CMY-2) on a conjugative IncA/C plasmid in a Vibrio parahaemolyticus isolate of food origin. | Li R, Lin D, Chen K, Wong MH, Chen S. | Antimicrob Agents Chemother | 10.1128/aac.05008-14 | 2015 | |
| Metabolism | The biomedical potential of genetically modified flax seeds overexpressing the glucosyltransferase gene. | Czemplik M, Kulma A, Bazela K, Szopa J. | BMC Complement Altern Med | 10.1186/1472-6882-12-251 | 2012 | |
| Conformational Fine-Tuning of Pore-Forming Peptide Potency and Selectivity. | Krauson AJ, Hall OM, Fuselier T, Starr CG, Kauffman WB, Wimley WC. | J Am Chem Soc | 10.1021/jacs.5b10595 | 2015 | ||
| Enzymology | Rapid detection of carbapenemase activity through monitoring ertapenem hydrolysis in Enterobacteriaceae with LC-MS/MS. | Peaper DR, Kulkarni MV, Tichy AN, Jarvis M, Murray TS, Hodsdon ME. | Bioanalysis | 10.4155/bio.12.310 | 2013 | |
| Enzymology | High diversity among environmental Escherichia coli isolates from a bovine feedlot. | Yang HH, Vinopal RT, Grasso D, Smets BF. | Appl Environ Microbiol | 10.1128/aem.70.3.1528-1536.2004 | 2004 | |
| Molecular characterization and analysis of high-level multidrug-resistance of Shigella flexneri serotype 4s strains from China. | Yang C, Li P, Zhang X, Ma Q, Cui X, Li H, Liu H, Wang J, Xie J, Wu F, Sheng C, Du X, Qi L, Su W, Jia L, Xu X, Zhao J, Xia S, Zhou N, Ma H, Qiu S, Song H. | Sci Rep | 10.1038/srep29124 | 2016 | ||
| A new hybrid bacteriocin, Ent35-MccV, displays antimicrobial activity against pathogenic Gram-positive and Gram-negative bacteria. | Acuna L, Picariello G, Sesma F, Morero RD, Bellomio A. | FEBS Open Bio | 10.1016/j.fob.2012.01.002 | 2012 | ||
| Metabolism | Carbapenem-resistant Acinetobacter baumannii from Brazil: role of carO alleles expression and blaOXA-23 gene. | Fonseca EL, Scheidegger E, Freitas FS, Cipriano R, Vicente AC. | BMC Microbiol | 10.1186/1471-2180-13-245 | 2013 | |
| Daylight-driven rechargeable antibacterial and antiviral nanofibrous membranes for bioprotective applications. | Si Y, Zhang Z, Wu W, Fu Q, Huang K, Nitin N, Ding B, Sun G. | Sci Adv | 10.1126/sciadv.aar5931 | 2018 | ||
| Enzymology | Primary structure requirements for the maturation in vivo of penicillin acylase from Escherichia coli ATCC 11105. | Sizmann D, Keilmann C, Bock A. | Eur J Biochem | 10.1111/j.1432-1033.1990.tb19207.x | 1990 | |
| Enzymology | In vivo activities of ceftolozane, a new cephalosporin, with and without tazobactam against Pseudomonas aeruginosa and Enterobacteriaceae, including strains with extended-spectrum beta-lactamases, in the thighs of neutropenic mice. | Craig WA, Andes DR. | Antimicrob Agents Chemother | 10.1128/aac.01590-12 | 2013 | |
| Enzymology | Trends in the epidemiology of pandemic and non-pandemic strains of Vibrio parahaemolyticus isolated from diarrheal patients in Kolkata, India. | Pazhani GP, Bhowmik SK, Ghosh S, Guin S, Dutta S, Rajendran K, Saha DR, Nandy RK, Bhattacharya MK, Mukhopadhyay AK, Ramamurthy T. | PLoS Negl Trop Dis | 10.1371/journal.pntd.0002815 | 2014 | |
| Statins: antimicrobial resistance breakers or makers? | Ko HHT, Lareu RR, Dix BR, Hughes JD. | PeerJ | 10.7717/peerj.3952 | 2017 | ||
| Enzymology | Impact of processing method on recovery of bacteria from wipes used in biological surface sampling. | Downey AS, Da Silva SM, Olson ND, Filliben JJ, Morrow JB. | Appl Environ Microbiol | 10.1128/aem.00873-12 | 2012 | |
| Treatment with p33 curtails morbidity and mortality in a histone-induced murine shock model. | Westman J, Smeds E, Johansson L, Morgelin M, Olin AI, Malmstrom E, Linder A, Herwald H. | J Innate Immun | 10.1159/000363348 | 2014 | ||
| The anti-inflammatory and proresolving mediator resolvin E1 protects mice from bacterial pneumonia and acute lung injury. | Seki H, Fukunaga K, Arita M, Arai H, Nakanishi H, Taguchi R, Miyasho T, Takamiya R, Asano K, Ishizaka A, Takeda J, Levy BD. | J Immunol | 10.4049/jimmunol.0901809 | 2010 | ||
| Pathogenicity | Changes in macrophage phenotype after infection of pigs with Haemophilus parasuis strains with different levels of virulence. | Costa-Hurtado M, Olvera A, Martinez-Moliner V, Galofre-Mila N, Martinez P, Dominguez J, Aragon V. | Infect Immun | 10.1128/iai.00056-13 | 2013 | |
| Pathogenicity | Intraphagocytic bactericidal activity of bacterial DNA gyrase inhibitors against Serratia marcescens. | Traub WH. | Chemotherapy | 10.1159/000238297 | 1984 | |
| Metabolism | Mycofumigation through production of the volatile DNA-methylating agent N-methyl-N-nitrosoisobutyramide by fungi in the genus Muscodor. | Hutchings ML, Alpha-Cobb CJ, Hiller DA, Berro J, Strobel SA. | J Biol Chem | 10.1074/jbc.m117.779009 | 2017 | |
| Pathogenicity | In vitro double and triple synergistic activities of Polymyxin B, imipenem, and rifampin against multidrug-resistant Acinetobacter baumannii. | Yoon J, Urban C, Terzian C, Mariano N, Rahal JJ. | Antimicrob Agents Chemother | 10.1128/aac.48.3.753-757.2004 | 2004 | |
| Pathogenicity | Anomalous effect of serum on the antimicrobial activity of cefoperazone. | Lang SD, Cameron GL, Mullins PR. | Drugs | 10.2165/00003495-198100221-00012 | 1981 | |
| Pathogenicity | Identification and susceptibility testing of Enterobacteriaceae and Pseudomonas aeruginosa by direct inoculation from positive BACTEC blood culture bottles into Vitek 2. | Bruins MJ, Bloembergen P, Ruijs GJ, Wolfhagen MJ. | J Clin Microbiol | 10.1128/jcm.42.1.7-11.2004 | 2004 | |
| Pathogenicity | In vitro evaluation of alaphosphin (Ro 03-7008) against Serratia marcescens. | Traub WH. | Chemotherapy | 10.1159/000237890 | 1980 | |
| High-performance single cell genetic analysis using microfluidic emulsion generator arrays. | Zeng Y, Novak R, Shuga J, Smith MT, Mathies RA. | Anal Chem | 10.1021/ac902683t | 2010 | ||
| Pathogenicity | Emergence of multidrug-resistant Salmonella enterica serovar typhi in Korea. | Lee K, Yong D, Yum JH, Lim YS, Kim HS, Lee BK, Chong Y. | Antimicrob Agents Chemother | 10.1128/aac.48.11.4130-4135.2004 | 2004 | |
| The Diverse Activities and Mechanisms of the Acylphloroglucinol Antibiotic Rhodomyrtone: Antibacterial Activity and Beyond. | Rani R, Marinho Righetto G, Schafer AB, Wenzel M. | Antibiotics (Basel) | 10.3390/antibiotics13100936 | 2024 | ||
| Understanding the NaCl-dependent behavior of hydrogen production of a marine bacterium, Vibrio tritonius. | Al-Saari N, Amada E, Matsumura Y, Tanaka M, Mino S, Sawabe T. | PeerJ | 10.7717/peerj.6769 | 2019 | ||
| Biotechnology | Surface monitoring of L. monocytogenes by real-time fluorescence and colorimetric LAMP. | Abalo M, Lamas A, Teixeira C, Prado M, Garrido-Maestu A. | Appl Microbiol Biotechnol | 10.1007/s00253-024-13318-9 | 2024 | |
| Moving towards on-site detection of Shiga toxin-producing Escherichia coli in ready-to-eat leafy greens. | Costa-Ribeiro A, Lamas A, Mora A, Prado M, Garrido-Maestu A. | Curr Res Food Sci | 10.1016/j.crfs.2024.100716 | 2024 | ||
| Multiplex Detection of Salmonella spp., E. coli O157 and L. monocytogenes by qPCR Melt Curve Analysis in Spiked Infant Formula. | Azinheiro S, Carvalho J, Prado M, Garrido-Maestu A. | Microorganisms | 10.3390/microorganisms8091359 | 2020 | ||
| Application of Short Pre-enrichment, and Double Chemistry Real-Time PCR, Combining Fluorescent Probes and an Intercalating Dye, for Same-Day Detection and Confirmation of Salmonella spp. and Escherichia coli O157 in Ground Beef and Chicken Samples. | Garrido-Maestu A, Azinheiro S, Roumani F, Carvalho J, Prado M. | Front Microbiol | 10.3389/fmicb.2020.591041 | 2020 | ||
| Application of Recombinase Polymerase Amplification with Lateral Flow for a Naked-Eye Detection of Listeria monocytogenes on Food Processing Surfaces. | Azinheiro S, Carvalho J, Prado M, Garrido-Maestu A. | Foods | 10.3390/foods9091249 | 2020 | ||
| Phylogeny | Two novel Enterobacter species, Enterobacter chinensis sp. nov. and Enterobacter rongchengensis sp. nov., recovered from clinical samples carrying multiple virulence factors. | He Y, Xiao Y, Feng Y, Wu S, Wei L, Zong Z. | Microbiol Spectr | 10.1128/spectrum.00292-24 | 2024 | |
| Genetics | Precise Species Identification and Taxonomy Update for the Genus Kluyvera With Reporting Kluyvera sichuanensis sp. nov. | Liu L, Feng Y, Wei L, Qiao F, Zong Z. | Front Microbiol | 10.3389/fmicb.2020.579306 | 2020 |
| #6743 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17076 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #36445 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68382 | Automatically annotated from API zym . |
| #118678 | Collection of Institut Pasteur ; Curators of the CIP; CIP 110281 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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