[Ref.: #552] |
Sample type/isolated from |
clinical isolate |
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[Ref.: #46634] |
Sample type/isolated from |
Human |
* marker position based on {}
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Isolation sources categories |
#Infection |
#Medical environment |
#Clinic |
#Infection |
#Patient |
- |
#Infection |
#Patient |
#Specimen |
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Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
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[Ref.: #67770] |
Escherichia coli gene for 16S rRNA, partial sequence, strain: JCM 5491 |
AB594752 |
1464 |
|
562 tax ID |
[Ref.: #552] |
Escherichia coli partial 16S rRNA gene, strain DSM 1103 |
HE978270 |
1501 |
|
562 tax ID |
[Ref.: #20218] |
Escherichia coli strain ATCC 25922 16S ribosomal RNA gene, partial sequence |
KC429776 |
1355 |
|
562 tax ID |
* |
[Ref.: #124043] |
Escherichia coli ATCC:25922 gene for 16S rRNA, partial sequence. |
LC730904 |
166 |
|
562 tax ID |
* |
[Ref.: #124043] |
Escherichia coli gene for 16S rRNA, partial sequence, strain: NBRC 15034. |
AB680754 |
1467 |
|
562 tax ID |
* |
[Ref.: #20218] |
Escherichia coli strain ATCC 25922 16S ribosomal RNA gene, partial sequence |
DQ683069 |
1101 |
|
562 tax ID |
* |
[Ref.: #20218] |
Escherichia coli strain ATCC 25922 16S ribosomal RNA gene, partial sequence |
DQ360844 |
1532 |
|
562 tax ID |
* |
[Ref.: #20218] |
Escherichia coli partial 16S rRNA gene, strain ATCC 25922 |
FM207087 |
392 |
|
562 tax ID |
* |
[Ref.: #20218] |
E.coli (ATCC 25922) gene for 16S rRNA |
X80724 |
1452 |
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562 tax ID |
* |
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Availability in culture collections
External links
[Ref.: #552] |
Culture collection no. |
DSM 1103, ATCC 25922, NCIB 12210, WDCM 00013, CCUG 17620, CCUG 7736, CCUG 21456, JCM 5491, CCM 3954, CIP 76.24, IFO 15034, KCTC 1682, LMG 8223, NBRC 15034, NCIMB 12110 |
References
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#552 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 1103
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#41789 |
; Curators of the CIP;
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#46634 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 17620
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-
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#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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#68368 |
Automatically annotated from API 20E .
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#73917 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID2805.1 )
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#124043 |
Isabel Schober, Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
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- * These data were automatically processed and therefore are not curated
Change proposal
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