Escherichia coli Lederberg W1485 is a bacterium of the family Enterobacteriaceae.
16S sequence Bacteria| @ref 20215 |
Last LPSN update
2026-02-09 11:18:45 |
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 2290 | NZCYM-MEDIUM (DSMZ Medium 544) | Medium recipe at MediaDive  | Name: NZCYM-MEDIUM (DSMZ Medium 544) Composition: Casein hydrolysate 10.0 g/l Yeast extract 5.0 g/l NaCl 5.0 g/l Maltose 2.0 g/l MgSO4 x 7 H2O 2.0 g/l Casamino acids 1.0 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 2290 | positive | growth | 37 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 68368 | 28053 ChEBI | melibiose | + | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68368 | 30911 ChEBI | sorbitol | + | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68368 | gelatinase | - | from API 20E | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2290 | + | - | - | - | - | - | - | - | + | - | - | + | + | - | + | + | - | + | - | + | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 2290 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | + | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 2290 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | + | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 2290 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | + | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
Phages| @ref | Name | Strain number | |
|---|---|---|---|
| 124042 | Escherichia phage MS2 ( Emesvirus zinderi) | DSM 5695 | |
| 124042 | Escherichia phage Qbeta (Qubevirus durum) | DSM 5695 | |
| 124042 | Escherichia phage M13 (Escherichia virus M13) | DSM 5695 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Escherichia coli gene for 16S rRNA, partial sequence, strain: NBRC 3302 | AB680054 | 1467 |   | 562 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| A novel class of small-molecule inhibitors targeting bacteriophage infection. | Plochl K, Bottcher T. | RSC Chem Biol | 10.1039/d5cb00120j | 2025 | | |
| The use of plant extracts and bacteriophages as an alternative therapy approach in combatting bacterial infections: the study of lytic phages and Stevia rebaudiana. | Stachurska X, Mizielinska M, Ordon M, Nawrotek P. | J Vet Res | 10.2478/jvetres-2023-0059 | 2023 | | |
| Comparative evaluation of long-term preservation methods for morphologically distinct bacteriophages. | Huang W, Khan Mirzaei M, Deng L. | Microbiol Spectr | 10.1128/spectrum.01442-24 | 2025 | | |
| Filamentous bacteriophage M13 induces proinflammatory responses in intestinal epithelial cells. | Varadan AC, Grasis JA. | Infect Immun | 10.1128/iai.00618-24 | 2025 | | |
| Cefsulodin and Vancomycin: A Supplement for Chromogenic Coliform Agar for Detection of Escherichia coli and Coliform Bacteria from Different Water Sources. | Schalli M, Inwinkl SM, Platzer S, Baumert R, Reinthaler FF, Ofner-Kopeinig P, Haas D. | Microorganisms | 10.3390/microorganisms10122499 | 2022 | | |
| Impact of air humidity on the tenacity of different agents in bioaerosols. | Siller P, Skopeck B, Rosen K, Bartel A, Friese A, Rosler U. | PLoS One | 10.1371/journal.pone.0297193 | 2024 | | |
| pH Sensing Properties of Co3O4-RuO2-Based Electrodes and Their Application in Baltic Sea Water Quality Monitoring. | Uppuluri K, Szwagierczak D, Zaraska K, Zachariasz P, Stokowski M, Synkiewicz-Musialska B, Krzysciak P. | Sensors (Basel) | 10.3390/s25041065 | 2025 | | |
| The comparison of the antioxidant, antibacterial and antiviral potential of Polish fir honeydew and Manuka honeys. | Grabek-Lejko D, Milek M, Dzugan M. | Sci Rep | 10.1038/s41598-024-82429-0 | 2024 | | |
| Characterization of phage vB_EcoS-EE09 infecting E. coli DSM613 Isolated from Wastewater Treatment Plant Effluent and Comparative Proteomics of the Infected and Non-Infected Host | Barrero-Canosa J, Wang L, Oyugi A, Klaes S, Fischer P, Adrian L, Szewzyk U, Cooper M. | Microorganisms | 2023 | | ||
| Biological Properties of Recently Described Wild Bramble Rubus oklejewiczii against the Species from Similar Niches. | Grabek-Lejko D, Wolanin M, Szpytma A, Pajda D, Milek M, Puchalski C. | Foods | 10.3390/foods13020337 | 2024 | | |
| Biocompatible Chitosan Films Containing Acetic Acid Manifested Potent Antiviral Activity against Enveloped and Non-Enveloped Viruses. | Cano-Vicent A, Tunon-Molina A, Marti M, Serrano-Aroca A. | Int J Mol Sci | 10.3390/ijms241512028 | 2023 | | |
| Potential of a methanolic extract of Lawsonia inermis (L.) leaf as an alternative sanitiser in the time of COVID-19 Pandemic and beyond. | Majiya H, Galstyan A. | J Herb Med | 10.1016/j.hermed.2023.100633 | 2023 | | |
| Enzymology | Establishment and application of test methodology demonstrating the functionality of air purification systems in reducing virus-loaded aerosol in indoor air. | van der Vossen JMBM, Kreikamp AP, Hatt V, Ouwens AMT, Brasem DJ, Heerikhuisen M, Montijn RC. | J Hosp Infect | 10.1016/j.jhin.2023.03.004 | 2023 | |
| Stevia rebaudiana Bertoni as a sweet herbal medicine: traditional uses, potential applications, and future development. | Wang L, Chang T, Zhu T, Hu W, Wang X, Dong C, Sun Y, Zhang T, Jiang Y, Zhao C, Cui Y, Guo J, Liao X. | Front Pharmacol | 10.3389/fphar.2025.1638147 | 2025 | | |
| Removal of MS2 and fr Bacteriophages Using MgAl2O4-Modified, Al2O3-Stabilized Porous Ceramic Granules for Drinking Water Treatment. | Yuzbasi NS, Krawczyk PA, Domagala KW, Englert A, Burkhardt M, Stuer M, Graule T. | Membranes (Basel) | 10.3390/membranes12050471 | 2022 | | |
| Unveiling the Broad-Spectrum Virucidal Potential of Purified Clinoptilolite-Tuff. | Sarabi A, Nizet S, Rohrich A, Tschegg C. | Microorganisms | 10.3390/microorganisms12081572 | 2024 | | |
| Tiger Nut Milk's Antiviral Properties against Enveloped and Non-Enveloped Viruses: Effect of Concentration and Adding Sugar. | Tunon-Molina A, Cano-Vicent A, Serrano-Aroca A. | Int J Mol Sci | 10.3390/ijms241512018 | 2023 | | |
| Sampling efficiency and nucleic acid stability during long-term sampling with different bioaerosol samplers. | Boifot KO, Skogan G, Dybwad M. | Environ Monit Assess | 10.1007/s10661-024-12735-7 | 2024 | | |
| Waterline Disinfectants Reduce Dental Bioaerosols: A Multitracer Validation. | Allison JR, Dowson C, Jakubovics NS, Nile C, Durham J, Holliday R. | J Dent Res | 10.1177/00220345221093522 | 2022 | | |
| Enzymology | A rigorous assessment and comparison of enumeration methods for environmental viruses. | Kaletta J, Pickl C, Griebler C, Klingl A, Kurmayer R, Deng L. | Sci Rep | 10.1038/s41598-020-75490-y | 2020 | |
| Regulation of photo triggered cytotoxicity in electrospun nanomaterials: role of photosensitizer binding mode and polymer identity. | Galstyan A, Majiya H, Dobrindt U. | Nanoscale Adv | 10.1039/d1na00717c | 2021 | | |
| Overcoming donor variability and risks associated with fecal microbiota transplants through bacteriophage-mediated treatments. | Rasmussen TS, Mao X, Forster S, Larsen SB, Von Munchow A, Tranaes KD, Brunse A, Larsen F, Mejia JLC, Adamberg S, Hansen AK, Adamberg K, Hansen CHF, Nielsen DS. | Microbiome | 10.1186/s40168-024-01820-1 | 2024 | | |
| Standoff detection of biological agents using laser induced fluorescence-a comparison of 294 nm and 355 nm excitation wavelengths. | Farsund O, Rustad G, Skogan G. | Biomed Opt Express | 10.1364/boe.3.002964 | 2012 | | |
| Quartz crystal microbalance-based aptasensor integrated with magnetic pre-concentration system for detection of Listeria monocytogenes in food samples. | Beyazit F, Arica MY, Acikgoz-Erkaya I, Ozalp C, Bayramoglu G. | Mikrochim Acta | 10.1007/s00604-024-06307-2 | 2024 | | |
| Phytochemical Investigation and in vitro Antimicrobial and Antioxidant Activities Evaluation of Erianthemum aethiopicum Wiens and Polhill. | Gonfa T, Temesgen A, Kiros T, Muthusaravanan S, Erba Urgessa O, Teklu T. | J Exp Pharmacol | 10.2147/jep.s452098 | 2024 | | |
| Rapid, low-cost colorimetric detection of Salmonella Typhi bacteriophages for environmental surveillance. | da Silva KE, Yokoyama T, Naga SR, Maharjan M, Pereira Dos Santos PC, Fisher KN, Coulibaly JT, Yang MZ, Nelson EJ, Charles RC, Shafer K, Igiraneza B-L, Yusuf S, Mulder E, Neuzil K, Bogoch II, Shrestha R, Tamrakar D, Andrews JR. | mBio | 10.1128/mbio.01963-25 | 2025 | | |
| Antimicrobial Activity of Six International Artisanal Kefirs Against Bacillus cereus, Listeria monocytogenes, Salmonella enterica serovar Enteritidis, and Staphylococcus aureus. | Sindi A, Badsha MB, Nielsen B, Unlu G. | Microorganisms | 10.3390/microorganisms8060849 | 2020 | | |
| Identification of human host factors required for beta-defensin-2 expression in intestinal epithelial cells upon a bacterial challenge. | Wozniak W, Sechet E, Kwon YJ, Aulner N, Navarro L, Sperandio B. | Sci Rep | 10.1038/s41598-024-66568-y | 2024 | | |
| A review on synthesis and antibacterial potential of bio-selenium nanoparticles in the food industry. | Ao B, Du Q, Liu D, Shi X, Tu J, Xia X. | Front Microbiol | 10.3389/fmicb.2023.1229838 | 2023 | | |
| Aptamer decorated PDA@magnetic silica microparticles for bacteria purification. | Kavruk M, Babaie Z, Kibar G, Cetin B, Yesilkaya H, Amrani Y, Dursun AD, Ozalp VC. | Mikrochim Acta | 10.1007/s00604-024-06322-3 | 2024 | | |
| Exploration of Antibiotic Activity of Aminoglycosides, in Particular Ribostamycin Alone and in Combination With Ethylenediaminetetraacetic Acid Against Pathogenic Bacteria. | Kong J, Wu ZX, Wei L, Chen ZS, Yoganathan S. | Front Microbiol | 10.3389/fmicb.2020.01718 | 2020 | | |
| Pathogenicity | Synthesis, antimicrobial, antiquorum-sensing and antitumor activities of new benzimidazole analogs. | El-Gohary NS, Shaaban MI. | Eur J Med Chem | 10.1016/j.ejmech.2017.05.064 | 2017 | |
| Metabolism | Biosynthesis of Ag, Se, and ZnO nanoparticles with antimicrobial activities against resistant pathogens using waste isolate Streptomyces enissocaesilis. | Shaaban M, El-Mahdy AM. | IET Nanobiotechnol | 10.1049/iet-nbt.2017.0213 | 2018 | |
| Pathogenicity | Synthesis, antimicrobial, antiquorum-sensing, antitumor and cytotoxic activities of new series of cyclopenta(hepta)[b]thiophene and fused cyclohepta[b]thiophene analogs. | Abdel-Rahman SA, El-Gohary NS, El-Bendary ER, El-Ashry SM, Shaaban MI. | Eur J Med Chem | 10.1016/j.ejmech.2017.08.066 | 2017 | |
| Isolation, identification, and antibacterial evaluation of endophytic fungi from Gannan navel orange. | Wang H, Liu Z, Duan F, Chen Y, Qiu K, Xiong Q, Lin H, Zhang J, Tan H. | Front Microbiol | 10.3389/fmicb.2023.1172629 | 2023 | | |
| Silicone Foley catheters impregnated with microbial indole derivatives inhibit crystalline biofilm formation by Proteus mirabilis. | Amer MA, Ramadan MA, Attia AS, Wasfi R. | Front Cell Infect Microbiol | 10.3389/fcimb.2022.1010625 | 2022 | | |
| Construction of a Bacterial Lipidomics Analytical Platform: Pilot Validation with Bovine Paratuberculosis Serum. | Wood PL, Erol E. | Metabolites | 10.3390/metabo13070809 | 2023 | | |
| Metabolism | Synthesis, anticancer and antimicrobial evaluation of new benzofuran based derivatives: PI3K inhibition, quorum sensing and molecular modeling study. | El-Khouly OA, Henen MA, El-Sayed MA, Shabaan MI, El-Messery SM. | Bioorg Med Chem | 10.1016/j.bmc.2020.115976 | 2021 | |
| Metabolism | Restoration of the growth of Escherichia coli under K+-deficient conditions by Cs+ incorporation via the K+ transporter Kup. | Kato S, Kanata Y, Kitagawa W, Sone T, Asano K, Kamagata Y. | Sci Rep | 10.1038/s41598-017-02024-4 | 2017 | |
| Metabolism | Structure Determination, Functional Characterization, and Biosynthetic Implications of Nybomycin Metabolites from a Mining Reclamation Site-Associated Streptomyces. | Wang X, Elshahawi SI, Ponomareva LV, Ye Q, Liu Y, Copley GC, Hower JC, Hatcher BE, Kharel MK, Van Lanen SG, She QB, Voss SR, Thorson JS, Shaaban KA. | J Nat Prod | 10.1021/acs.jnatprod.9b01015 | 2019 | |
| Soil-Associated Bacillus Species: A Reservoir of Bioactive Compounds with Potential Therapeutic Activity against Human Pathogens. | Yahya G, Ebada A, Khalaf EM, Mansour B, Nouh NA, Mosbah RA, Saber S, Moustafa M, Negm S, El-Sokkary MMA, El-Baz AM. | Microorganisms | 10.3390/microorganisms9061131 | 2021 | | |
| Textural, Structural and Biological Evaluation of Hydroxyapatite Doped with Zinc at Low Concentrations. | Predoi D, Iconaru SL, Deniaud A, Chevallet M, Michaud-Soret I, Buton N, Prodan AM. | Materials (Basel) | 10.3390/ma10030229 | 2017 | | |
| Development and Characterization of an Antimicrobial Polydopamine Coating for Conservation of Humpback Whales. | Tyo A, Welch S, Hennenfent M, Kord Fooroshani P, Lee BP, Rajachar R. | Front Chem | 10.3389/fchem.2019.00618 | 2019 | | |
| Synthesis and biological screening of new thiadiazolopyrimidine-based polycyclic compounds. | Alqahtani AM. | Sci Rep | 10.1038/s41598-021-95241-x | 2021 | | |
| Antibacterial and Cytotoxic Actinomycins Y6-Y9 and Zp from Streptomyces sp. Strain Gö-GS12. | Cai W, Wang X, Elshahawi SI, Ponomareva LV, Liu X, McErlean MR, Cui Z, Arlinghaus AL, Thorson JS, Van Lanen SG. | J Nat Prod | 10.1021/acs.jnatprod.6b00742 | 2016 | | |
| Localization of the ferredoxin (fdx) gene on the physical map of the Escherichia coli chromosome. | Ta DT, Seaton BL, Vickery LE. | J Bacteriol | 10.1128/jb.174.17.5760-5761.1992 | 1992 | | |
| Barcoding bacterial cells: A SERS based methodology for pathogen identification. | Patel IS, Premasiri WR, Moir DT, Ziegler LD. | J Raman Spectrosc | 10.1002/jrs.2064 | 2008 | | |
| Pathogenicity | Effects of ionic strength on bacteriophage MS2 behavior and their implications for the assessment of virus retention by ultrafiltration membranes. | Furiga A, Pierre G, Glories M, Aimar P, Roques C, Causserand C, Berge M. | Appl Environ Microbiol | 10.1128/aem.01075-10 | 2011 | |
| Metabolism | Alterations of cellular physiology in Escherichia coli in response to oxidative phosphorylation impaired by defective F1-ATPase. | Noda S, Takezawa Y, Mizutani T, Asakura T, Nishiumi E, Onoe K, Wada M, Tomita F, Matsushita K, Yokota A. | J Bacteriol | 10.1128/jb.00452-06 | 2006 | |
| Atomic layer deposition-based functionalization of materials for medical and environmental health applications. | Narayan RJ, Adiga SP, Pellin MJ, Curtiss LA, Hryn AJ, Stafslien S, Chisholm B, Shih CC, Shih CM, Lin SJ, Su YY, Jin C, Zhang J, Monteiro-Riviere NA, Elam JW. | Philos Trans A Math Phys Eng Sci | 10.1098/rsta.2010.0011 | 2010 | | |
| Metabolism | The Escherichia coli mutant requiring D-glutamic acid is the result of mutations in two distinct genetic loci. | Dougherty TJ, Thanassi JA, Pucci MJ. | J Bacteriol | 10.1128/jb.175.1.111-116.1993 | 1993 | |
| Pathogenicity | Hycanthone and its congeners as bacterial mutagens. | Cook TM, Goldman CK. | J Bacteriol | 10.1128/jb.122.2.549-556.1975 | 1975 | |
| Specific detection of Salmonella spp. by multiplex polymerase chain reaction. | Way JS, Josephson KL, Pillai SD, Abbaszadegan M, Gerba CP, Pepper IL. | Appl Environ Microbiol | 10.1128/aem.59.5.1473-1479.1993 | 1993 | | |
| Cationic Substitutions in Hydroxyapatite: Current Status of the Derived Biofunctional Effects and Their In Vitro Interrogation Methods. | Tite T, Popa AC, Balescu LM, Bogdan IM, Pasuk I, Ferreira JMF, Stan GE. | Materials (Basel) | 10.3390/ma11112081 | 2018 | | |
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| Enzymology | Antimicrobial Polymers in the Nano-World. | Alvarez-Paino M, Munoz-Bonilla A, Fernandez-Garcia M. | Nanomaterials (Basel) | 10.3390/nano7020048 | 2017 | |
| Antiserum to the 33,000-dalton periplasmic-flagellum protein of "Treponema phagedenis" reacts with other treponemes and Spirochaeta aurantia. | Limberger RJ, Charon NW. | J Bacteriol | 10.1128/jb.168.2.1030-1032.1986 | 1986 | | |
| Enzymology | Effect of glucose and low oxygen tension on L-asparaginase production by a strain of Escherichia coli B. | Boeck LD, Sires RW, Wilson MW, Ho PP. | Appl Microbiol | 10.1128/am.20.6.964-969.1970 | 1970 | |
| Methanogenesis from sucrose by defined immobilized consortia. | Jones WJ, Guyot JP, Wolfe RS. | Appl Environ Microbiol | 10.1128/aem.47.1.1-6.1984 | 1984 | | |
| Analysis of cereal extracts as conditioning solutes to suppress the initial attachment of Escherichia coli to abiotic surfaces | Sakai H, Sakai T, Badr HAB, Kanemaru K, Yokoigawa K. | Eur Food Res Technol | 10.1007/s00217-020-03444-9 | 2021 | | |
| Enzymology | Aerosolization of respirable droplets from a domestic spa pool and the use of MS-2 coliphage and Pseudomonas aeruginosa as markers for Legionella pneumophila. | Moore G, Hewitt M, Stevenson D, Walker JT, Bennett AM. | Appl Environ Microbiol | 10.1128/aem.02912-14 | 2015 | |
| Pathogenicity | Chlorination of indicator bacteria and viruses in primary sewage effluent. | Tree JA, Adams MR, Lees DN. | Appl Environ Microbiol | 10.1128/aem.69.4.2038-2043.2003 | 2003 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive4573.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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