Escherichia coli C is an aerobe, mesophilic, Gram-negative prokaryote of the family Enterobacteriaceae.
Gram-negative motile rod-shaped aerobe mesophilic genome sequence
SI-ID 35862
| @ref 20215 |
|
Last LPSN update
2026-02-09 11:18:44 |
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 1768 | LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) | Medium recipe at MediaDive  | Name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) Composition: Agar 20.0 g/l NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l Distilled water | ||
| 41572 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 118680 | CIP Medium 72 | Medium recipe at CIP | |||
| 118680 | CIP Medium 3 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 90 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68374 | 29016 ChEBI | arginine | - | hydrolysis | from API ID32E |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68374 | 17057 ChEBI | cellobiose | - | builds acid from | from API ID32E |
| 118680 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68374 | 18333 ChEBI | D-arabitol | + | builds acid from | from API ID32E |
| 68374 | 18024 ChEBI | D-galacturonic acid | + | builds acid from | from API ID32E |
| 68374 | 17634 ChEBI | D-glucose | + | builds acid from | from API ID32E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68374 | 16899 ChEBI | D-mannitol | + | builds acid from | from API ID32E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 118680 | 17234 ChEBI | glucose | + | fermentation | |
| 118680 | 17234 ChEBI | glucose | + | degradation | |
| 68374 | 30849 ChEBI | L-arabinose | + | builds acid from | from API ID32E |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68374 | 18403 ChEBI | L-arabitol | - | builds acid from | from API ID32E |
| 68374 | 62345 ChEBI | L-rhamnose | + | builds acid from | from API ID32E |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 118680 | 17716 ChEBI | lactose | + | fermentation | |
| 68374 | 25094 ChEBI | lysine | - | degradation | from API ID32E |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 118680 | 15792 ChEBI | malonate | - | assimilation | |
| 68374 | 15792 ChEBI | malonate | - | assimilation | from API ID32E |
| 68374 | 17306 ChEBI | maltose | + | builds acid from | from API ID32E |
| 118680 | 29864 ChEBI | mannitol | + | fermentation | |
| 68368 | 28053 ChEBI | melibiose | + | fermentation | from API 20E |
| 68374 | 17268 ChEBI | myo-inositol | - | builds acid from | from API ID32E |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 118680 | 17632 ChEBI | nitrate | + | reduction | |
| 118680 | 16301 ChEBI | nitrite | - | reduction | |
| 68374 | 18257 ChEBI | ornithine | - | degradation | from API ID32E |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68374 | 18394 ChEBI | palatinose | - | builds acid from | from API ID32E |
| 68374 | Potassium 5-ketogluconate | - | builds acid from | from API ID32E | |
| 68374 | 15963 ChEBI | ribitol | + | builds acid from | from API ID32E |
| 118680 | 132112 ChEBI | sodium thiosulfate | - | builds gas from | |
| 68374 | 30911 ChEBI | sorbitol | - | builds acid from | from API ID32E |
| 68368 | 30911 ChEBI | sorbitol | + | fermentation | from API 20E |
| 68374 | 17992 ChEBI | sucrose | - | builds acid from | from API ID32E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68374 | 27082 ChEBI | trehalose | + | builds acid from | from API ID32E |
| 68374 | 27897 ChEBI | tryptophan | + | energy source | from API ID32E |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68374 | 16199 ChEBI | urea | - | hydrolysis | from API ID32E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 118680 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 118680 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | + | 3.2.1.22 | from API zym |
| 68374 | alpha-galactosidase | + | 3.2.1.22 | from API ID32E |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68374 | alpha-glucosidase | - | 3.2.1.20 | from API ID32E |
| 68374 | alpha-maltosidase | - | from API ID32E | |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68374 | arginine dihydrolase | - | 3.5.3.6 | from API ID32E |
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 118680 | beta-galactosidase | + | 3.2.1.23 | |
| 68374 | beta-galactosidase | + | 3.2.1.23 | from API ID32E |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68374 | beta-glucosidase | - | 3.2.1.21 | from API ID32E |
| 68382 | beta-glucuronidase | + | 3.2.1.31 | from API zym |
| 68374 | beta-glucuronidase | + | 3.2.1.31 | from API ID32E |
| 118680 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 118680 | gelatinase | - | ||
| 68368 | gelatinase | - | from API 20E | |
| 68374 | L-aspartate arylamidase | - | 3.4.11.21 | from API ID32E |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68374 | lipase | - | from API ID32E | |
| 68382 | lipase (C 14) | - | from API zym | |
| 118680 | lysine decarboxylase | - | 4.1.1.18 | |
| 68374 | lysine decarboxylase | - | 4.1.1.18 | from API ID32E |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68374 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API ID32E |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 118680 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68374 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32E |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 118680 | oxidase | - | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 118680 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 118680 | urease | - | 3.5.1.5 | |
| 68374 | urease | - | 3.5.1.5 | from API ID32E |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1768 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | + | + | - | + | - | + | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 1768 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | + | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
| @ref | ODC | ADH (Arg) | LDC (Lys) | URE | LARL | GAT | 5KG | LipaseLIP | Phenol red (Acidification)RP | beta GLU | MAN | MAL | ADO | PLE | beta GUR | MNT | IND | N-Acetyl-beta-Glucosaminidasebeta NAG | beta GAL | GLU | SAC | LARA | DARL | alpha GLU | alpha GAL | TRE | RHA | INO | CEL | SOR | alpha-MaltosidasealphaMAL | L-aspartic acid arylamidaseAspA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58384 | - | - | - | - | - | + | - | - | + | - | + | + | + | - | + | - | + | - | + | + | - | + | + | - | + | + | + | - | - | - | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM328724v1 assembly for Escherichia coli C | complete | GCA_003287245   | 562.30430  | 2875683775  | 562 | 99.27 | |
| 66792 | ASM207922v1 assembly for Escherichia coli C | complete | GCA_002079225 | 498388.3 | 2913137851 | 498388 | 99.18 | |
| 66792 | ASM209289v1 assembly for Escherichia coli C | scaffold | GCA_002092895 | 498388 | 45.14 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Metabolism | Fermentation of lactose to ethanol in cheese whey permeate and concentrated permeate by engineered Escherichia coli. | Pasotti L, Zucca S, Casanova M, Micoli G, Cusella De Angelis MG, Magni P. | BMC Biotechnol | 10.1186/s12896-017-0369-y | 2017 | |
| Characterization of Five Lytic Bacteriophages as New Members of the Genus Mosigvirus, Infecting Multidrug-Resistant Shiga Toxin-Producing Escherichia coli and Their Antibiofilm Activity. | Na JB, Lee S, Park EJ, Lim S, Lee K, Kim YB, Cha TS, Park SY, Kim JH. | Viruses | 10.3390/v17111501 | 2025 | | |
| Effect of Bacteriophages against Biofilms of Escherichia coli on Food Processing Surfaces. | Bras A, Braz M, Martinho I, Duarte J, Pereira C, Almeida A. | Microorganisms | 10.3390/microorganisms12020366 | 2024 | | |
| Potential of an Isolated Bacteriophage to Inactivate Klebsiella pneumoniae: Preliminary Studies to Control Urinary Tract Infections. | Duarte J, Maximo C, Costa P, Oliveira V, Gomes NCM, Romalde JL, Pereira C, Almeida A. | Antibiotics (Basel) | 10.3390/antibiotics13020195 | 2024 | | |
| Evaluating Anti-ESKAPE Potential of Valeriana Officinalis L. Extract against Healthcare-Associated Infections in Tertiary Hospitals of Al-Kharj Governorate: An In Vitro Study. | Khan MS, Bari MN. | J Pharm Bioallied Sci | 10.4103/jpbs.jpbs_1253_24 | 2024 | | |
| Genomic insights into plasmid mediated AMR genes, virulence factors and mobile genetic elements in raw milk Escherichia coli from Gujarat, India. | Mangroliya D, Adhyaru H, Kabariya J, Ramani V. | Sci Rep | 10.1038/s41598-025-90761-2 | 2025 | | |
| A Study of Bioactivities and Composition of a Cocktail of Supernatants Derived from Lactic Acid Bacteria for Potential Food Applications. | Huang X, Nzekoue FK, Wang J, Attili AR, Coman MM, Verdenelli MC, Fiorini D, Rossi G, Marchini C, Miceli C, Silvi S. | Probiotics Antimicrob Proteins | 10.1007/s12602-024-10442-w | 2025 | | |
| Distributions of Fecal Indicators at Aquaculture Areas in a Bay of Republic of Korea. | Park S, Lee C, Jang SJ, Cho K, Kim JH, Kim WK, Kang JH, Park KS, Ko G. | J Microbiol Biotechnol | 10.4014/jmb.2406.06001 | 2024 | | |
| The impact of scale and frass recirculation on pathogen inactivation dynamics in black soldier fly larvae bioconversion. | Lalander C, Lopes IG, Gyftopoulos N, Vinneras B. | Front Microbiol | 10.3389/fmicb.2025.1539486 | 2025 | | |
| Characterization of Broad Spectrum Bacteriophage vB ESM-pEJ01 and Its Antimicrobial Efficacy Against Shiga Toxin-Producing Escherichia coli in Green Juice. | Park EJ, Lee S, Na JB, Kim YB, Lee KM, Park SY, Kim JH. | Microorganisms | 10.3390/microorganisms13010103 | 2025 | | |
| Genetics | Characterization of a T4-like Bacteriophage vB_EcoM-Sa45lw as a Potential Biocontrol Agent for Shiga Toxin-Producing Escherichia coli O45 Contaminated on Mung Bean Seeds. | Liao YT, Zhang Y, Salvador A, Harden LA, Wu VCH. | Microbiol Spectr | 10.1128/spectrum.02220-21 | 2022 | |
| Screening the Rumen of Balochi Camel (Camelus dromedarius) and Cashmere Goat (Capra hircus) to Isolate Enzyme-Producing Bacteria as Potential Additives for Animal Feed. | Gheibipour M, Ghiasi SE, Bashtani M, Torbati MBM, Motamedi H. | Indian J Microbiol | 10.1007/s12088-024-01197-7 | 2024 | | |
| Filamentous bacteriophage M13 induces proinflammatory responses in intestinal epithelial cells. | Varadan AC, Grasis JA. | Infect Immun | 10.1128/iai.00618-24 | 2025 | | |
| Draft Genome Sequence of Escherichia coli DSM 12242, a Highly Efficient Host Strain for the Isolation of Somatic Coliphages. | Pacifico C, Sofka D, Carrico JA, Hilbert F. | Microbiol Resour Announc | 10.1128/mra.00953-19 | 2019 | | |
| Phage single-stranded DNA-binding protein or host DNA damage triggers the activation of the AbpAB phage defense system. | Sasaki T, Takita S, Fujishiro T, Shintani Y, Nojiri S, Yasui R, Yonesaki T, Otsuka Y. | mSphere | 10.1128/msphere.00372-23 | 2023 | | |
| Remote biofilm dislodgment using focused acoustic vortex. | Li CH, Chao WH, Wu PC, Fan CH. | Ultrason Sonochem | 10.1016/j.ultsonch.2025.107423 | 2025 | | |
| Investigation into scalable and efficient enterotoxigenic Escherichia coli bacteriophage production. | Wiebe KG, Cook BWM, Lightly TJ, Court DA, Theriault SS. | Sci Rep | 10.1038/s41598-024-53276-w | 2024 | | |
| A New Kayfunavirus-like Escherichia Phage vB_EcoP-Ro45lw with Antimicrobial Potential of Shiga Toxin-Producing Escherichia coli O45 Strain. | Sun X, Liao YT, Zhang Y, Salvador A, Ho KJ, Wu VCH. | Microorganisms | 10.3390/microorganisms11010077 | 2022 | | |
| Genome Sequence of a T4-like Phage, Escherichia Phage vB_EcoM-Sa45lw, Infecting Shiga Toxin-Producing Escherichia coli Strains. | Liao YT, Zhang Y, Salvador A, Wu VCH. | Microbiol Resour Announc | 10.1128/mra.00804-19 | 2019 | | |
| Role of Lysogenic Phages in the Dissemination of Antibiotic Resistance Genes Applied in the Food Chain. | Cadamuro RD, Elois MA, Pilati GVT, Savi BP, Pessi L, Jempierre YFSH, Rodriguez-Lazaro D, Fongaro G. | Foods | 10.3390/foods14071082 | 2025 | | |
| Evaluation of an Automated Ultrafiltration System for Concentrating a Range of Viruses from Saline Waters. | Singh S, Aw TG, Rose JB. | Food Environ Virol | 10.1007/s12560-024-09602-6 | 2024 | | |
| The novel sterilization device: the prototype testing. | Nowak R, Wityk P, Wierzbicka-Wos A, Gos W, Kostrzewa-Nowak D. | Sci Rep | 10.1038/s41598-023-44483-y | 2023 | | |
| Complete Genome Sequence of Escherichia coli Phage vB_EcoM Sa157lw, Isolated from Surface Water Collected in Salinas, California. | Liu F, Liao YT, Li RW, Wu VCH. | Microbiol Resour Announc | 10.1128/mra.00718-19 | 2019 | | |
| Aggravated exposure risks of children to multipath transmitted pathogens in indoor environments. | Liu Z, Hu L, Hu C, Liu Q, Liang Z, Rong R, Liu H. | iScience | 10.1016/j.isci.2023.108433 | 2023 | | |
| Genetics | The impact of storage buffer and storage conditions on fecal samples for bacteriophage infectivity and metavirome analyses. | Zhai X, Castro-Mejia JL, Gobbi A, Aslampaloglou A, Kot W, Nielsen DS, Deng L. | Microbiome | 10.1186/s40168-023-01632-9 | 2023 | |
| Proteome | The Impact of the Culture Regime on the Metabolome and Anti-Phytopathogenic Activity of Marine Fungal Co-Cultures. | Reza MZ, Oppong-Danquah E, Tasdemir D. | Mar Drugs | 10.3390/md22020066 | 2024 | |
| Gapless, Unambiguous Genome Sequence for Escherichia coli C, a Workhorse of Industrial Biology. | Pekar JE, Phaneuf P, Szubin R, Palsson B, Feist A, Monk JM. | Microbiol Resour Announc | 10.1128/mra.00890-18 | 2018 | | |
| Combined Effect of Phage phT4A and Pressure-Based Strategies in the Inhibition of Escherichia coli. | Pereira C, Marques JF, Reis S, Costa P, Martins AP, Pinto CA, Saraiva JA, Almeida A. | Antibiotics (Basel) | 10.3390/antibiotics11020211 | 2022 | | |
| An Innovative Food Processing Technology: Microwave Electrodeless Ultraviolet, Luminescence Mechanism, Microbial Inactivation, and Food Application. | Chang S, Zhang Z, Liu Q, Wu H, Dong A. | Foods | 10.3390/foods13244110 | 2024 | | |
| Isolation and Characterization of Infection of Four New Bacteriophages Infecting a Vibrio parahaemolyticus Strain. | Duarte J, Trindade D, Oliveira V, Gomes NCM, Calado R, Pereira C, Almeida A. | Antibiotics (Basel) | 10.3390/antibiotics13111086 | 2024 | | |
| Persistence of sewage-associated genetic markers in advanced and conventional treated recycled water: implications for microbial source tracking in surface waters. | Lobos AE, Brandt AM, Gallard-Gongora JF, Korde R, Brodrick E, Harwood VJ. | mBio | 10.1128/mbio.00655-24 | 2024 | | |
| Genetics | Discovery of Shiga Toxin-Producing Escherichia coli (STEC)-Specific Bacteriophages From Non-fecal Composts Using Genomic Characterization. | Liao YT, Sun X, Quintela IA, Bridges DF, Liu F, Zhang Y, Salvador A, Wu VCH. | Front Microbiol | 10.3389/fmicb.2019.00627 | 2019 | |
| Anti-Viral Photodynamic Inactivation of T4-like Bacteriophage as a Mammalian Virus Model in Blood. | Santos P, Gomes ATPC, Lourenco LMO, Faustino MAF, Neves MGPMS, Almeida A. | Int J Mol Sci | 10.3390/ijms231911548 | 2022 | | |
| A new approach to measure the resistance of fabric to liquid and viral penetration. | Li M, Furlong JL, Yorio PL, Portnoff L. | PLoS One | 10.1371/journal.pone.0211827 | 2019 | | |
| Enzymology | Phages in urban wastewater have the potential to disseminate antibiotic resistance. | Gunathilaka GU, Tahlan V, Mafiz A, Polur M, Zhang Y. | Int J Antimicrob Agents | 10.1016/j.ijantimicag.2017.08.013 | 2017 | |
| Novel non intrusive continuous use ZeBox technology to trap and kill airborne microbes. | Phadke KS, Madival DG, Venkataraman J, Kundu D, Ramanujan KS, Holla N, Arakeri J, Tomar G, Datta S, Ghatak A. | Sci Rep | 10.1038/s41598-021-02184-4 | 2021 | | |
| Evaluating the Microbial Safety of Heat-Treated Fecal Sludge for Black Soldier Fly Larvae Production in South Africa. | Peguero DA, Mutsakatira ET, Buckley CA, Foutch GL, Bischel HN. | Environ Eng Sci | 10.1089/ees.2020.0272 | 2021 | | |
| Antimicrobial Resistance-Transducing Bacteriophages Isolated from Surfaces of Equine Surgery Clinics - A Pilot Study. | Hilbert M, Csadek I, Auer U, Hilbert F. | Eur J Microbiol Immunol (Bp) | 10.1556/1886.2017.00032 | 2017 | | |
| Human adenovirus-associated health risk in the recreational waters of the Yal-ku lagoon in the Mexican Caribbean. | Hernandez-Zepeda C, Negrete-Alcalde LJ, Rosiles-Gonzalez G, Carrillo-Jovel VH, Abney SE, Betancourt WQ, Gerba CP, Chaidez-Quiroz C, Wilson AM. | J Water Health | 10.2166/wh.2024.309 | 2024 | | |
| Pathogenicity | Diversity and Local Coadaptation of Escherichia coli and Coliphages From Small Ruminants. | Molina F, Simancas A, Tabla R, Gomez A, Roa I, Rebollo JE. | Front Microbiol | 10.3389/fmicb.2020.564522 | 2020 | |
| Genetics | Characterization of polyvalent Escherichia phage Sa157lw for the biocontrol potential of Salmonella Typhimurium and Escherichia coli O157:H7 on contaminated mung bean seeds. | Liao YT, Zhang Y, Salvador A, Ho KJ, Cooley MB, Wu VCH. | Front Microbiol | 10.3389/fmicb.2022.1053583 | 2022 | |
| Genetics | Industrial Composting of Sewage Sludge: Study of the Bacteriome, Sanitation, and Antibiotic-Resistant Strains. | Lopez-Gonzalez JA, Estrella-Gonzalez MJ, Lerma-Moliz R, Jurado MM, Suarez-Estrella F, Lopez MJ. | Front Microbiol | 10.3389/fmicb.2021.784071 | 2021 | |
| Genetics | Bacteriophages pass through candle-shaped porous ceramic filters: Application for the collection of viruses in soil water. | Florent P, Cauchie HM, Herold M, Ogorzaly L. | Microbiologyopen | 10.1002/mbo3.1314 | 2022 | |
| Evaluation of fermentation conditions triggering increased antibacterial activity from a near-shore marine intertidal environment-associated Streptomyces species. | English AL, Boufridi A, Quinn RJ, Kurtboke DI. | Synth Syst Biotechnol | 10.1016/j.synbio.2016.09.005 | 2017 | | |
| Bacteriophages as Biological Control Agents of Enteric Bacteria Contaminating Edible Oysters. | Le TS, Southgate PC, O'Connor W, Poole S, Kurtboke DI. | Curr Microbiol | 10.1007/s00284-017-1424-6 | 2018 | | |
| Genetics | Characterization of Two New Shiga Toxin-Producing Escherichia coli O103-Infecting Phages Isolated from an Organic Farm. | Zhang Y, Liao YT, Salvador A, Lavenburg VM, Wu VCH. | Microorganisms | 10.3390/microorganisms9071527 | 2021 | |
| Antibacterial and Antitumor Potential of Actinomycetes Isolated from Mangrove Soil in the Maowei Sea of the Southern Coast of China. | Gong B, Chen S, Lan W, Huang Y, Zhu X. | Iran J Pharm Res | 2018 | | ||
| Antimicrobial activity of silver-copper coating against aerosols containing surrogate respiratory viruses and bacteria. | Reyes-Carmona L, Sepulveda-Robles OA, Almaguer-Flores A, Bello-Lopez JM, Ramos-Vilchis C, Rodil SE. | PLoS One | 10.1371/journal.pone.0294972 | 2023 | | |
| Fabrication of Ag-doped ZnO/PAN composite nanofibers by electrospinning: Photocatalytic and antiviral activities. | Yoon J, Kim J, Park S, Jeong YW, Lee C, Oh SG. | Korean J Chem Eng | 10.1007/s11814-021-1037-4 | 2022 | | |
| Bacteriophages Isolated from Chicken Meat and the Horizontal Transfer of Antimicrobial Resistance Genes. | Shousha A, Awaiwanont N, Sofka D, Smulders FJ, Paulsen P, Szostak MP, Humphrey T, Hilbert F. | Appl Environ Microbiol | 10.1128/aem.00872-15 | 2015 | | |
| Multifunctional Hydrogel Dressing That Carries Three Antibiotics Simultaneously and Enables Real-Time Ultrasound Bacterial Colony Detection. | Yeh YW, Huang CC, Kuo WS, Liao TL, Tsai TL, Wu PC. | ACS Omega | 10.1021/acsomega.2c07806 | 2023 | | |
| Phylogeny | Distribution of droplets/droplet nuclei from coughing and breathing of patients with different postures in a hospital isolation ward. | Liu H, Liu Z, Wang Y, Hu C, Rong R. | Build Environ | 10.1016/j.buildenv.2022.109690 | 2022 | |
| Coliphages as viral indicators of sanitary significance for drinking water. | Singh S, Pitchers R, Hassard F. | Front Microbiol | 10.3389/fmicb.2022.941532 | 2022 | | |
| Rational probe design for efficient rRNA depletion and improved metatranscriptomic analysis of human microbiomes. | Tan A, Murugapiran S, Mikalauskas A, Koble J, Kennedy D, Hyde F, Ruotti V, Law E, Jensen J, Schroth GP, Macklaim JM, Kuersten S, LeFrancois B, Gohl DM. | BMC Microbiol | 10.1186/s12866-023-03037-y | 2023 | | |
| Sequential Combined Effect of Phages and Antibiotics on the Inactivation of Escherichia coli. | Lopes A, Pereira C, Almeida A. | Microorganisms | 10.3390/microorganisms6040125 | 2018 | | |
| The Impact of Wastewater on Antimicrobial Resistance: A Scoping Review of Transmission Pathways and Contributing Factors. | La Rosa MC, Maugeri A, Favara G, La Mastra C, Magnano San Lio R, Barchitta M, Agodi A. | Antibiotics (Basel) | 10.3390/antibiotics14020131 | 2025 | | |
| The effect of UV radiation on O-7 Actinomycete in producing bioactive compounds in different growth conditions. | Ibnouf EO. | Saudi J Biol Sci | 10.1016/j.sjbs.2021.04.070 | 2021 | | |
| Evaluation of Ultraviolet-C Light for Rapid Decontamination of Airport Security Bins in the Era of SARS-CoV-2. | Cadnum JL, Li DF, Jones LD, Redmond SN, Pearlmutter B, Wilson BM, Donskey CJ. | Pathog Immun | 10.20411/pai.v5i1.373 | 2020 | | |
| Characterisation and antimicrobial activity of biosurfactant extracts produced by Bacillus amyloliquefaciens and Pseudomonas aeruginosa isolated from a wastewater treatment plant. | Ndlovu T, Rautenbach M, Vosloo JA, Khan S, Khan W. | AMB Express | 10.1186/s13568-017-0363-8 | 2017 | | |
| Antimicrobial and wound healing activities of certain Sudanese medicinal plants. | Moglad EH, Hamad AM, Fatima F, Devanathadesikan Seshadri V, Naz M. | Saudi J Biol Sci | 10.1016/j.sjbs.2020.05.017 | 2020 | | |
| Actinobacteria Community and Their Antibacterial and Cytotoxic Activity on the Weizhou and Xieyang Volcanic Islands in the Beibu Gulf of China. | Wang L, Peng C, Gong B, Yang Z, Song J, Li L, Xu L, Yue T, Wang X, Yang M, Xu H, Liu X. | Front Microbiol | 10.3389/fmicb.2022.911408 | 2022 | | |
| Reduction of Bacteria in Relation to Feeding Regimes When Treating Aquaculture Waste in Fly Larvae Composting. | Lopes IG, Lalander C, Vidotti RM, Vinneras B. | Front Microbiol | 10.3389/fmicb.2020.01616 | 2020 | | |
| Different Behavior of Enteric Bacteria and Viruses in Clay and Sandy Soils after Biofertilization with Swine Digestate. | Fongaro G, Garcia-Gonzalez MC, Hernandez M, Kunz A, Barardi CR, Rodriguez-Lazaro D. | Front Microbiol | 10.3389/fmicb.2017.00074 | 2017 | | |
| Pathogenicity | Development and Optimization of an Unbiased, Metagenomics-Based Pathogen Detection Workflow for Infectious Disease and Biosurveillance Applications. | Parker K, Wood H, Russell JA, Yarmosh D, Shteyman A, Bagnoli J, Knight B, Aspinwall JR, Jacobs J, Werking K, Winegar R. | Trop Med Infect Dis | 10.3390/tropicalmed8020121 | 2023 | |
| Efficient Catalytic Oxidation of 3-Arylthio- and 3-Cyclohexylthio-lapachone Derivatives to New Sulfonyl Derivatives and Evaluation of Their Antibacterial Activities. | Cardoso MF, Gomes AT, Moreira CD, Simoes MM, Neves MG, da Rocha DR, da Silva FC, Moreirinha C, Almeida A, Ferreira VF, Cavaleiro JA. | Molecules | 10.3390/molecules22020302 | 2017 | | |
| Fit-Tested N95 Masks Combined With Portable High-Efficiency Particulate Air Filtration Can Protect Against High Aerosolized Viral Loads Over Prolonged Periods at Close Range. | Landry SA, Subedi D, Barr JJ, MacDonald MI, Dix S, Kutey DM, Mansfield D, Hamilton GS, Edwards BA, Joosten SA. | J Infect Dis | 10.1093/infdis/jiac195 | 2022 | | |
| Pathogenicity | Exploring the antimicrobial resistance profiles of WHO critical priority list bacterial strains. | Havenga B, Ndlovu T, Clements T, Reyneke B, Waso M, Khan W. | BMC Microbiol | 10.1186/s12866-019-1687-0 | 2019 | |
| Phylogeny | A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples. | Deng L, Silins R, Castro-Mejia JL, Kot W, Jessen L, Thorsen J, Shah S, Stokholm J, Bisgaard H, Moineau S, Nielsen DS. | Viruses | 10.3390/v11070667 | 2019 | |
| Effectiveness of Ultraviolet-C Light and a High-Level Disinfection Cabinet for Decontamination of N95 Respirators. | Cadnum JL, Li DF, Redmond SN, John AR, Pearlmutter B, Donskey CJ. | Pathog Immun | 10.20411/pai.v5i1.372 | 2020 | | |
| Enzymology | Chitosan Coagulation Pretreatment to Enhance Ceramic Water Filtration for Household Water Treatment. | Coleman CK, Mai E, Miller M, Sharma S, Williamson C, Oza H, Holmes E, Lamer M, Ly C, Stewart J, Sobsey MD, Abebe LS. | Int J Mol Sci | 10.3390/ijms22189736 | 2021 | |
| Genetics | Global Composition of the Bacteriophage Community in Honey Bees. | Busby TJ, Miller CR, Moran NA, Van Leuven JT. | mSystems | 10.1128/msystems.01195-21 | 2022 | |
| Bacteriophages with Potential to Inactivate Aeromonas hydrophila in Cockles: In Vitro and In Vivo Preliminary Studies. | Duarte J, Pereira C, Costa P, Almeida A. | Antibiotics (Basel) | 10.3390/antibiotics10060710 | 2021 | | |
| In Vitro Biological Impact of Nanocellulose Fibers on Human Gut Bacteria and Gastrointestinal Cells. | Lopes VR, Stromme M, Ferraz N. | Nanomaterials (Basel) | 10.3390/nano10061159 | 2020 | | |
| UVC LED Irradiation Effectively Inactivates Aerosolized Viruses, Bacteria, and Fungi in a Chamber-Type Air Disinfection System. | Kim DK, Kang DH. | Appl Environ Microbiol | 10.1128/aem.00944-18 | 2018 | | |
| A Comprehensive Analysis of the UVC LEDs' Applications and Decontamination Capability. | Nicolau T, Gomes Filho N, Padrao J, Zille A. | Materials (Basel) | 10.3390/ma15082854 | 2022 | | |
| Efficiency of Single Phage Suspensions and Phage Cocktail in the Inactivation of Escherichia coli and Salmonella Typhimurium: An In Vitro Preliminary Study. | Costa P, Pereira C, Gomes ATPC, Almeida A. | Microorganisms | 10.3390/microorganisms7040094 | 2019 | | |
| A combination therapy of Phages and Antibiotics: Two is better than one. | Li X, He Y, Wang Z, Wei J, Hu T, Si J, Tao G, Zhang L, Xie L, Abdalla AE, Wang G, Li Y, Teng T. | Int J Biol Sci | 10.7150/ijbs.60551 | 2021 | | |
| Human Pathogenic Bacteria Detected in Rainwater: Risk Assessment and Correlation to Microbial Source Tracking Markers and Traditional Indicators. | Denissen JK, Reyneke B, Waso M, Khan S, Khan W. | Front Microbiol | 10.3389/fmicb.2021.659784 | 2021 | | |
| Enzymology | A Somatic Coliphage Threshold Approach To Improve the Management of Activated Sludge Wastewater Treatment Plant Effluents in Resource-Limited Regions. | Chacon L, Barrantes K, Santamaria-Ulloa C, Solano M, Reyes L, Taylor L, Valiente C, Symonds EM, Achi R. | Appl Environ Microbiol | 10.1128/aem.00616-20 | 2020 | |
| Enzymology | Identifying septic pollution exposure routes during a waterborne norovirus outbreak - A new application for human-associated microbial source tracking qPCR. | Mattioli MC, Benedict KM, Murphy J, Kahler A, Kline KE, Longenberger A, Mitchell PK, Watkins S, Berger P, Shanks OC, Barrett CE, Barclay L, Hall AJ, Hill V, Weltman A. | J Microbiol Methods | 10.1016/j.mimet.2020.106091 | 2021 | |
| Bacteriophages Contribute to the Spread of Antibiotic Resistance Genes among Foodborne Pathogens of the Enterobacteriaceae Family - A Review. | Colavecchio A, Cadieux B, Lo A, Goodridge LD. | Front Microbiol | 10.3389/fmicb.2017.01108 | 2017 | | |
| Pathogenicity | A New Pipeline for Designing Phage Cocktails Based on Phage-Bacteria Infection Networks. | Molina F, Simancas A, Ramirez M, Tabla R, Roa I, Rebollo JE. | Front Microbiol | 10.3389/fmicb.2021.564532 | 2021 | |
| Two-Step Size-Exclusion Nanofiltration of Prothrombin Complex Concentrate Using Nanocellulose-Based Filter Paper. | Manukyan L, Mantas A, Razumikhin M, Katalevsky A, Golubev E, Mihranyan A. | Biomedicines | 10.3390/biomedicines8040069 | 2020 | | |
| Enzymology | Chloride Enhances DNA Reactivity with Chlorine under Conditions Relevant to Water Treatment. | Szczuka A, Horton J, Evans KJ, DiPietri VT, Sivey JD, Wigginton KR. | Environ Sci Technol | 10.1021/acs.est.2c03267 | 2022 | |
| Viral and Bacterial Fecal Indicators in Untreated Wastewater across the Contiguous United States Exhibit Geospatial Trends. | Korajkic A, McMinn B, Herrmann MP, Sivaganesan M, Kelty CA, Clinton P, Nash MS, Shanks OC. | Appl Environ Microbiol | 10.1128/aem.02967-19 | 2020 | | |
| Molecular characterization of the virulent microorganisms along with their drug-resistance traits associated with the export quality frozen shrimps in Bangladesh. | Noor R, Hasan MF, Rahman MM. | Springerplus | 10.1186/2193-1801-3-469 | 2014 | | |
| The Age of Phage: Friend or Foe in the New Dawn of Therapeutic and Biocontrol Applications? | Hassan AY, Lin JT, Ricker N, Anany H. | Pharmaceuticals (Basel) | 10.3390/ph14030199 | 2021 | | |
| Biological Weighting Functions for Evaluating the Role of Sunlight-Induced Inactivation of Coliphages at Selected Beaches and Nearby Tributaries. | Zepp RG, Cyterski M, Wong K, Georgacopoulos O, Acrey B, Whelan G, Parmar R, Molina M. | Environ Sci Technol | 10.1021/acs.est.8b02191 | 2018 | | |
| Pathogenicity | Influence of beta-glucans on the immune responses of carpet shell clam (Ruditapes decussatus) and Mediterranean mussel (Mytilus galloprovincialis). | Mar Costa M, Novoa B, Figueras A. | Fish Shellfish Immunol | 10.1016/j.fsi.2007.10.003 | 2008 | |
| Evaluating a transfer gradient assumption in a fomite-mediated microbial transmission model using an experimental and Bayesian approach. | Wilson AM, King MF, Lopez-Garcia M, Weir MH, Sexton JD, Canales RA, Kostov GE, Julian TR, Noakes CJ, Reynolds KA. | J R Soc Interface | 10.1098/rsif.2020.0121 | 2020 | | |
| Direct quantification of test bacteria in synthetic water-polluted samples by square wave voltammetry and chemometric methods. | Carpani I, Conti P, Lanteri S, Legnani PP, Leoni E, Tonelli D. | Biosens Bioelectron | 10.1016/j.bios.2007.09.018 | 2008 | | |
| Fighting Pathogenic Bacteria on Two Fronts: Phages and Antibiotics as Combined Strategy. | Tagliaferri TL, Jansen M, Horz HP. | Front Cell Infect Microbiol | 10.3389/fcimb.2019.00022 | 2019 | | |
| Pathogenicity | Viruses as key reservoirs of antibiotic resistance genes in the environment. | Debroas D, Siguret C. | ISME J | 10.1038/s41396-019-0478-9 | 2019 | |
| Prokaryotic innate immunity through pattern recognition of conserved viral proteins. | Gao LA, Wilkinson ME, Strecker J, Makarova KS, Macrae RK, Koonin EV, Zhang F. | Science | 10.1126/science.abm4096 | 2022 | | |
| Cytotoxicity of Formulated Graphene and Its Natural Rubber Nanocomposite Thin Film in Human Vaginal Epithelial Cells: An Influence of Noncovalent Interaction. | Sukumar T, Varghese J, S K, Bhargavan S, Jayasree P, Suvekbala V, Alaganandam K, Ragupathy L. | ACS Biomater Sci Eng | 10.1021/acsbiomaterials.9b01897 | 2020 | | |
| Antimicrobial Photodynamic Approach in the Inactivation of Viruses in Wastewater: Influence of Alternative Adjuvants. | Bartolomeu M, Oliveira C, Pereira C, Neves MGPMS, Faustino MAF, Almeida A. | Antibiotics (Basel) | 10.3390/antibiotics10070767 | 2021 | | |
| Engineering laminated paper for SARS-CoV-2 medical gowns. | Hossain L, Maliha M, Barajas-Ledesma R, Kim J, Putera K, Subedi D, Tanner J, Barr JJ, Banaszak Holl MM, Garnier G. | Polymer (Guildf) | 10.1016/j.polymer.2021.123643 | 2021 | | |
| Enzymology | Hygienic quality of artificial greywater subjected to aerobic treatment: a comparison of three filter media at increasing organic loading rates. | Lalander C, Dalahmeh S, Jonsson H, Vinneras B. | Environ Technol | 10.1080/09593330.2013.783603 | 2013 | |
| Genetics | Definitive demonstration by synthesis of genome annotation completeness. | Jaschke PR, Dotson GA, Hung KS, Liu D, Endy D. | Proc Natl Acad Sci U S A | 10.1073/pnas.1905990116 | 2019 | |
| Silver/poly (lactic acid) nanocomposites: preparation, characterization, and antibacterial activity. | Shameli K, Ahmad MB, Yunus WM, Ibrahim NA, Rahman RA, Jokar M, Darroudi M. | Int J Nanomedicine | 10.2147/ijn.s12007 | 2010 | | |
| Metabolism | Use of heterotrophic CO2 assimilation as a measure of metabolic activity in planktonic and sessile bacteria. | Roslev P, Larsen MB, Jorgensen D, Hesselsoe M. | J Microbiol Methods | 10.1016/j.mimet.2004.08.002 | 2004 | |
| Metabolism | A new Microviridae phage isolated from a failed biotechnological process driven by Escherichia coli. | Labrie SJ, Dupuis ME, Tremblay DM, Plante PL, Corbeil J, Moineau S. | Appl Environ Microbiol | 10.1128/aem.01365-14 | 2014 | |
| Plasma generated ozone and reactive oxygen species for point of use PPE decontamination system. | Huang M, Hasan MK, Rathore K, Hil Baky MA, Lassalle J, Kraus J, Burnette M, Campbell C, Wang K, Jemison H, Pillai S, Pharr M, Staack D. | PLoS One | 10.1371/journal.pone.0262818 | 2022 | | |
| Occurrence of coliphage in raw wastewater and in ambient water: A meta-analysis. | Nappier SP, Hong T, Ichida A, Goldstone A, Eftim SE. | Water Res | 10.1016/j.watres.2018.12.058 | 2019 | | |
| Cellulose acetate containing toluidine blue and rose bengal is an effective antimicrobial coating when exposed to white light. | Decraene V, Pratten J, Wilson M. | Appl Environ Microbiol | 10.1128/aem.02945-05 | 2006 | | |
| Detection of shigella in lettuce by the use of a rapid molecular assay with increased sensitivity. | Jimenez KB, McCoy CB, Achi R. | Braz J Microbiol | 10.1590/s1517-838220100004000018 | 2010 | | |
| Morphostructural Damage in Food-Spoiling Bacteria due to the Lemon Grass Oil and Its Vapour: SEM, TEM, and AFM Investigations. | Tyagi AK, Malik A. | Evid Based Complement Alternat Med | 10.1155/2012/692625 | 2012 | | |
| Impact of pH and feeding system on black soldier fly (Hermetia illucens, L; Diptera: Stratiomyidae) larval development. | Meneguz M, Gasco L, Tomberlin JK. | PLoS One | 10.1371/journal.pone.0202591 | 2018 | | |
| Phylogeny | Peering below the diffraction limit: robust and specific sorting of viruses with flow cytometry. | Lance ST, Sukovich DJ, Stedman KM, Abate AR. | Virol J | 10.1186/s12985-016-0655-7 | 2016 | |
| Phylogeny | Diversity of somatic coliphages in coastal regions with different levels of anthropogenic activity in São Paulo State, Brazil. | Burbano-Rosero EM, Ueda-Ito M, Kisielius JJ, Nagasse-Sugahara TK, Almeida BC, Souza CP, Markman C, Martins GG, Albertini L, Rivera IN. | Appl Environ Microbiol | 10.1128/aem.02780-10 | 2011 | |
| Enzymology | PCR-activated cell sorting as a general, cultivation-free method for high-throughput identification and enrichment of virus hosts. | Lim SW, Lance ST, Stedman KM, Abate AR. | J Virol Methods | 10.1016/j.jviromet.2016.12.009 | 2017 | |
| Enzymology | Quantification of bacterial indicators and zoonotic pathogens in dairy wastewater ponds. | Dungan RS, Klein M, Leytem AB. | Appl Environ Microbiol | 10.1128/aem.02470-12 | 2012 | |
| Metabolism | Elution and reconcentration of coliphages in water from positively charged membrane filters with urea-arginine phosphate buffer. | Jothikumar N, Cliver DO. | J Virol Methods | 10.1016/s0166-0934(97)02195-2 | 1997 | |
| Biotechnology | Destruction of gram-negative food-borne pathogens by high pH involves disruption of the cytoplasmic membrane. | Mendonca AF, Amoroso TL, Knabel SJ. | Appl Environ Microbiol | 10.1128/aem.60.11.4009-4014.1994 | 1994 | |
| Inactivation of viruses on surfaces by ultraviolet germicidal irradiation. | Tseng CC, Li CS. | J Occup Environ Hyg | 10.1080/15459620701329012 | 2007 | | |
| Extending the "One Strain Many Compounds" (OSMAC) Principle to Marine Microorganisms. | Romano S, Jackson SA, Patry S, Dobson ADW. | Mar Drugs | 10.3390/md16070244 | 2018 | | |
| Enzymology | Microbial contamination of groundwater at small community water supplies in Finland. | Pitkanen T, Karinen P, Miettinen IT, Lettojarvi H, Heikkila A, Maunula R, Aula V, Kuronen H, Vepsalainen A, Nousiainen LL, Pelkonen S, Heinonen-Tanski H. | Ambio | 10.1007/s13280-010-0102-8 | 2011 | |
| Antiviral properties of silver nanoparticles on a magnetic hybrid colloid. | Park S, Park HH, Kim SY, Kim SJ, Woo K, Ko G. | Appl Environ Microbiol | 10.1128/aem.03427-13 | 2014 | | |
| Enzymology | Surface plasmon resonance assay for real-time monitoring of somatic coliphages in wastewaters. | Garcia-Aljaro C, Munoz-Berbel X, Jenkins AT, Blanch AR, Munoz FX. | Appl Environ Microbiol | 10.1128/aem.02806-07 | 2008 | |
| Combinatorial strategies for improving multiple-stress resistance in industrially relevant Escherichia coli strains. | Lennen RM, Herrgard MJ. | Appl Environ Microbiol | 10.1128/aem.01542-14 | 2014 | | |
| Collection efficiencies of aerosol samplers for virus-containing aerosols. | Tseng CC, Li CS. | J Aerosol Sci | 10.1016/j.jaerosci.2004.12.004 | 2005 | | |
| Regrowth of potential opportunistic pathogens and algae in reclaimed-water distribution systems. | Jjemba PK, Weinrich LA, Cheng W, Giraldo E, Lechevallier MW. | Appl Environ Microbiol | 10.1128/aem.03147-09 | 2010 | | |
| Pathogenicity | Comparative in vitro study of the antimicrobial activities of different commercial antibiotic products for intravenous administration. | Silva E, Diaz JA, Arias MJ, Hernandez AP, de la Torre A. | BMC Clin Pharmacol | 10.1186/1472-6904-10-3 | 2010 | |
| Metabolism | Photocatalytic disinfection using titanium dioxide: spectrum and mechanism of antimicrobial activity. | Foster HA, Ditta IB, Varghese S, Steele A. | Appl Microbiol Biotechnol | 10.1007/s00253-011-3213-7 | 2011 | |
| Inactivation of pathogens in feces by desiccation and urea treatment for application in urine-diverting dry toilets. | Magri ME, Philippi LS, Vinneras B. | Appl Environ Microbiol | 10.1128/aem.03920-12 | 2013 | | |
| Enzymology | Incorporating expert judgments in utility evaluation of bacteroidales qPCR assays for microbial source tracking in a drinking water source. | Astrom J, Pettersson TJ, Reischer GH, Norberg T, Hermansson M. | Environ Sci Technol | 10.1021/es504579j | 2015 | |
| Metabolism | A fibrin biofilm covers blood clots and protects from microbial invasion. | Macrae FL, Duval C, Papareddy P, Baker SR, Yuldasheva N, Kearney KJ, McPherson HR, Asquith N, Konings J, Casini A, Degen JL, Connell SD, Philippou H, Wolberg AS, Herwald H, Ariens RA. | J Clin Invest | 10.1172/jci98734 | 2018 | |
| Characterization of virus adsorption by using DEAE-sepharose and octyl-sepharoser. | Shields PA, Farrah SR. | Appl Environ Microbiol | 10.1128/aem.68.8.3965-3968.2002 | 2002 | | |
| Metabolism | Sorbicillinoid analogs with cytotoxic and selective anti-Aspergillus activities from Scytalidium album. | El-Elimat T, Raja HA, Figueroa M, Swanson SM, Falkinham JO, Lucas DM, Grever MR, Wani MC, Pearce CJ, Oberlies NH. | J Antibiot (Tokyo) | 10.1038/ja.2014.125 | 2015 | |
| SARS-CoV-2 in wastewater: State of the knowledge and research needs. | Kitajima M, Ahmed W, Bibby K, Carducci A, Gerba CP, Hamilton KA, Haramoto E, Rose JB. | Sci Total Environ | 10.1016/j.scitotenv.2020.139076 | 2020 | | |
| Solar Disinfection of Viruses in Polyethylene Terephthalate Bottles. | Carratala A, Dionisio Calado A, Mattle MJ, Meierhofer R, Luzi S, Kohn T. | Appl Environ Microbiol | 10.1128/aem.02897-15 | 2016 | | |
| Pathogenicity | Assessment of viral disinfection by means of bacteriophage OX 174. | Bydzovska O, Kneiflova J. | J Hyg Epidemiol Microbiol Immunol | 1983 | | |
| Enzymology | PCR-based method for detecting viral penetration of medical exam gloves. | Broyles JM, O'Connell KP, Korniewicz DM. | J Clin Microbiol | 10.1128/jcm.40.8.2725-2728.2002 | 2002 | |
| Animal viruses, coliphages, and bacteria in aerosols and wastewater at a spray irrigation site. | Brenner KP, Scarpino PV, Clark CS. | Appl Environ Microbiol | 10.1128/aem.54.2.409-415.1988 | 1988 | | |
| Phylogeny | Sampling natural viral communities from soil for culture-independent analyses. | Williamson KE, Wommack KE, Radosevich M. | Appl Environ Microbiol | 10.1128/aem.69.11.6628-6633.2003 | 2003 | |
| Analysis of dsDNA and RNA viromes in methanogenic digesters reveals novel viral genetic diversity. | Calusinska M, Marynowska M, Goux X, Lentzen E, Delfosse P. | Environ Microbiol | 10.1111/1462-2920.13127 | 2016 | | |
| Enzymology | Practical direct plaque assay for coliphages in 100-ml samples of drinking water. | Grabow WO, Coubrough P. | Appl Environ Microbiol | 10.1128/aem.52.3.430-433.1986 | 1986 | |
| Molecular characterization of bacteriophages for microbial source tracking in Korea. | Lee JE, Lim MY, Kim SY, Lee S, Lee H, Oh HM, Hur HG, Ko G. | Appl Environ Microbiol | 10.1128/aem.00464-09 | 2009 | | |
| Pathogenicity | Charge effect on the photoinactivation of Gram-negative and Gram-positive bacteria by cationic meso-substituted porphyrins. | Alves E, Costa L, Carvalho CM, Tome JP, Faustino MA, Neves MG, Tome AC, Cavaleiro JA, Cunha A, Almeida A. | BMC Microbiol | 10.1186/1471-2180-9-70 | 2009 | |
| Metabolism | De novo synthesis of thymidylate via deoxycytidine in dcd (dCTP deaminase) mutants of Escherichia coli. | Weiss B, Wang L. | J Bacteriol | 10.1128/jb.176.8.2194-2199.1994 | 1994 | |
| Delineating the specific influence of virus isoelectric point and size on virus adsorption and transport through sandy soils. | Dowd SE, Pillai SD, Wang S, Corapcioglu MY. | Appl Environ Microbiol | 10.1128/aem.64.2.405-410.1998 | 1998 | | |
| Stress | Survival of bacterial indicator species and bacteriophages after thermal treatment of sludge and sewage. | Moce-Llivina L, Muniesa M, Pimenta-Vale H, Lucena F, Jofre J. | Appl Environ Microbiol | 10.1128/aem.69.3.1452-1456.2003 | 2003 | |
| Differential Effect of Tetrazolium Dyes upon Bacteriophage Plaque Assay Titers. | Hurst CJ, Blannon JC, Hardaway RL, Jackson WC. | Appl Environ Microbiol | 10.1128/aem.60.9.3462-3465.1994 | 1994 | | |
| Enzymology | Environmental factors influencing human viral pathogens and their potential indicator organisms in the blue mussel, Mytilus edulis: the first Scandinavian report. | Hernroth BE, Conden-Hansson AC, Rehnstam-Holm AS, Girones R, Allard AK. | Appl Environ Microbiol | 10.1128/aem.68.9.4523-4533.2002 | 2002 | |
| Specific detection of Salmonella spp. by multiplex polymerase chain reaction. | Way JS, Josephson KL, Pillai SD, Abbaszadegan M, Gerba CP, Pepper IL. | Appl Environ Microbiol | 10.1128/aem.59.5.1473-1479.1993 | 1993 | | |
| Enzymology | Detection of infectious enteroviruses, enterovirus genomes, somatic coliphages, and Bacteroides fragilis phages in treated wastewater. | Gantzer C, Maul A, Audic JM, Schwartzbrod L. | Appl Environ Microbiol | 10.1128/aem.64.11.4307-4312.1998 | 1998 | |
| Evaluation of immunomodulatory effects of lactic acid bacteria in turbot (Scophthalmus maximus). | Villamil L, Tafalla C, Figueras A, Novoa B. | Clin Diagn Lab Immunol | 10.1128/cdli.9.6.1318-1323.2002 | 2002 | | |
| Field evaluation of two colorimetric coliphage detection methods. | Ijzerman MM, Falkinham JO, Reneau RB, Hagedorn C. | Appl Environ Microbiol | 10.1128/aem.60.3.826-830.1994 | 1994 | | |
| Incidence of coliphage in potable water supplies. | el-Abagy MM, Dutka BJ, Kamel M, el Zanfaly HT. | Appl Environ Microbiol | 10.1128/aem.54.6.1632-1633.1988 | 1988 | | |
| Bacteriophage inactivation at the air-water-solid interface in dynamic batch systems. | Thompson SS, Yates MV. | Appl Environ Microbiol | 10.1128/aem.65.3.1186-1190.1999 | 1999 | | |
| Leakage of virus through used vinyl and latex examination gloves. | Korniewicz DM, Laughon BE, Cyr WH, Lytle CD, Larson E. | J Clin Microbiol | 10.1128/jcm.28.4.787-788.1990 | 1990 | | |
| Antimicrobial photodynamic inactivation in nanomedicine: small light strides against bad bugs. | Yin R, Agrawal T, Khan U, Gupta GK, Rai V, Huang YY, Hamblin MR. | Nanomedicine (Lond) | 10.2217/nnm.15.67 | 2015 | | |
| Enzymology | Multistate evaluation of an ultrafiltration-based procedure for simultaneous recovery of enteric microbes in 100-liter tap water samples. | Hill VR, Kahler AM, Jothikumar N, Johnson TB, Hahn D, Cromeans TL. | Appl Environ Microbiol | 10.1128/aem.02713-06 | 2007 | |
| Enzymology | Concentration of viruses in beef extract by flocculation with ammonium sulfate. | Shields PA, Farrah SR. | Appl Environ Microbiol | 10.1128/aem.51.1.211-213.1986 | 1986 | |
| UV-induced alleviation of K-specific restriction of bacteriophage lambda. | Day RS. | J Virol | 10.1128/jvi.21.3.1249-1251.1977 | 1977 | | |
| Enzymology | Immunomagnetic capture PCR for rapid concentration and detection of hepatitis A virus from environmental samples. | Jothikumar N, Cliver DO, Mariam TW. | Appl Environ Microbiol | 10.1128/aem.64.2.504-508.1998 | 1998 | |
| Interaction of drug resistance plasmids and bacteriophages with diarrheagenic strains of Escherichia coli. | Bradley DE. | Infect Immun | 10.1128/iai.57.8.2331-2338.1989 | 1989 | | |
| Cultivation | Comparison of selective media for assay of coliphages in sewage effluent and lake water. | Kennedy JE, Bitton G, Oblinger JL. | Appl Environ Microbiol | 10.1128/aem.49.1.33-36.1985 | 1985 | |
| Enzymology | Occurrence of airborne bacteria and pathogen indicators during land application of sewage sludge. | Pillai SD, Widmer KW, Dowd SE, Ricke SC. | Appl Environ Microbiol | 10.1128/aem.62.1.296-299.1996 | 1996 | |
| Phylogeny | Evaluation of commercial antisera for Shigella serogrouping. | Lefebvre J, Gosselin F, Ismail J, Lorange M, Lior H, Woodward D. | J Clin Microbiol | 10.1128/jcm.33.8.1997-2001.1995 | 1995 | |
| Enzymology | Vulnerability of drinking-water wells in La Crosse, Wisconsin, to enteric-virus contamination from surface water contributions. | Borchardt MA, Haas NL, Hunt RJ. | Appl Environ Microbiol | 10.1128/aem.70.10.5937-5946.2004 | 2004 | |
| Metabolism | phi X174-directed DNA and protein syntheses in infected minicells. | Reeve JN. | J Virol | 10.1128/jvi.40.2.396-402.1981 | 1981 | |
| PCR amplification of the fimA gene sequence of Salmonella typhimurium, a specific method for detection of Salmonella spp. | Cohen HJ, Mechanda SM, Lin W. | Appl Environ Microbiol | 10.1128/aem.62.12.4303-4308.1996 | 1996 | | |
| Role of the air-water-solid interface in bacteriophage sorption experiments. | Thompson SS, Flury M, Yates MV, Jury WA. | Appl Environ Microbiol | 10.1128/aem.64.1.304-309.1998 | 1998 | | |
| Enzymology | Simple method for concentration of bacteria from large volumes of tap water. | Goyal SM, Gerba CP. | Appl Environ Microbiol | 10.1128/aem.40.5.912-916.1980 | 1980 | |
| Influence of salts on virus adsorption to microporous filters. | Lukasik J, Scott TM, Andryshak D, Farrah SR. | Appl Environ Microbiol | 10.1128/aem.66.7.2914-2920.2000 | 2000 | | |
| Enzymology | Effect of glucose and low oxygen tension on L-asparaginase production by a strain of Escherichia coli B. | Boeck LD, Sires RW, Wilson MW, Ho PP. | Appl Microbiol | 10.1128/am.20.6.964-969.1970 | 1970 | |
| Sewage coliphages studied by electron microscopy. | Ackermann HW, Nguyen TM. | Appl Environ Microbiol | 10.1128/aem.45.3.1049-1059.1983 | 1983 | | |
| Biotechnology | Methodology for enumeration of coliphages in foods. | Kennedy JE, Wei CI, Oblinger JL. | Appl Environ Microbiol | 10.1128/aem.51.5.956-962.1986 | 1986 | |
| Metabolism | Properties of metK mutants of Escherichia coli K-12. | Greene RC, Hunter JS, Coch EH. | J Bacteriol | 10.1128/jb.115.1.57-67.1973 | 1973 | |
| Sunlight inactivation of fecal bacteriophages and bacteria in sewage-polluted seawater. | Sinton LW, Finlay RK, Lynch PA. | Appl Environ Microbiol | 10.1128/aem.65.8.3605-3613.1999 | 1999 | | |
| Enzymology | Evaluation of coliphage detection as a rapid indicator of water quality. | Wentsel RS, O'Neill PE, Kitchens JF. | Appl Environ Microbiol | 10.1128/aem.43.2.430-434.1982 | 1982 | |
| Pathogenicity | Rates of inactivation of waterborne coliphages by monochloramine. | Dee SW, Fogleman JC. | Appl Environ Microbiol | 10.1128/aem.58.9.3136-3141.1992 | 1992 | |
| Enzymology | Multiple forms of bacterial hydrogenases. | Ackrell BA, Asato RN, Mower HF. | J Bacteriol | 10.1128/jb.92.4.828-838.1966 | 1966 | |
| Serum bactericidal effect on Pseudomonas aeruginosa isolates from cystic fibrosis patients. | Thomassen MJ, Demko CA. | Infect Immun | 10.1128/iai.33.2.512-518.1981 | 1981 | | |
| Enzymology | Concentration of coliphages from large volumes of water and wastewater. | Goyal SM, Zerda KS, Gerba CP. | Appl Environ Microbiol | 10.1128/aem.39.1.85-91.1980 | 1980 | |
| Comparative adsorption of human enteroviruses, simian rotavirus, and selected bacteriophages to soils. | Goyal SM, Gerba CP. | Appl Environ Microbiol | 10.1128/aem.38.2.241-247.1979 | 1979 | | |
| Phages and their satellites encode hotspots of antiviral systems. | Rousset F, Depardieu F, Miele S, Dowding J, Laval AL, Lieberman E, Garry D, Rocha EPC, Bernheim A, Bikard D. | Cell Host Microbe | 10.1016/j.chom.2022.02.018 | 2022 | | |
| Microfluidic droplet application for bacterial surveillance in fresh-cut produce wash waters. | Harmon JB, Gray HK, Young CC, Schwab KJ. | PLoS One | 10.1371/journal.pone.0233239 | 2020 | | |
| Bioinputs from Eugenia dysenterica DC. (Myrtaceae): Optimization of Ultrasound-Assisted Extraction and Assessment of Antioxidant, Antimicrobial, and Antibiofilm Activities. | Barbosa FG, Silva GF, Oliveira VLP, Kubijan LAC, Costa LG, Melo AM, Teofilo MNG, Morgado CMA, Campos AJ, Peixoto JC, Borges LL, E Silva Neto CM, Santana ES, Paula JAM. | Molecules | 10.3390/molecules30051115 | 2025 | | |
| Synthesis, Characterization, and Dual Functional Properties of Coumarin-Based Hybrids for Biological and Optical Applications. | Lima JGM, Dos Santos JRN, Abegao LMG, Cocca LHZ, de Almeida LR, Napolitano HB, Ribeiro L, Ramos LM. | ACS Omega | 10.1021/acsomega.5c08426 | 2025 | | |
| Plant-mediated synthesis of zinc oxide (ZnO) nanoparticles using Alnus nepalensis D. Don for biological applications. | Jaishi DR, Ojha I, Bhattarai G, Baraili R, Pathak I, Ojha DR, Shrestha DK, Sharma KR. | Heliyon | 10.1016/j.heliyon.2024.e39255 | 2024 | | |
| Transcriptome | Multi-Omics Study on Molecular Mechanisms of Single-Atom Fe-Doped Two-Dimensional Conjugated Phthalocyanine Framework for Photocatalytic Antibacterial Performance. | Diao S, Duan Y, Wang M, Feng Y, Miao H, Zhao Y. | Molecules | 10.3390/molecules29071601 | 2024 | |
| Plant assisted synthesis of silver nanoparticles using Persicaria perfoliata (L.) for antioxidant, antibacterial, and anticancer properties. | Shrestha DK, Jaishi DR, Ojha I, Ojha DR, Pathak I, Magar AB, Parajuli N, Sharma KR. | Heliyon | 10.1016/j.heliyon.2024.e40543 | 2024 | | |
| Pathogenicity | Inhibition of bacterial biofilms by carboxymethyl chitosan combined with silver, zinc and copper salts. | Goncalves RC, da Silva DP, Signini R, Naves PLF. | Int J Biol Macromol | 10.1016/j.ijbiomac.2017.07.048 | 2017 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive4507.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
License