Escherichia coli DSM 787 is a facultative anaerobe, mesophilic, Gram-negative human pathogen of the family Enterobacteriaceae.
Gram-negative motile rod-shaped facultative anaerobe mesophilic human pathogen genome sequence 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 445 | NUTRIENT AGAR (DSMZ Medium 1) | Medium recipe at MediaDive | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water | ||
| 35145 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 118349 | CIP Medium 72 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 94.6 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 118349 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 50CH acid |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | + | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | + | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | + | builds acid from | from API 50CH acid |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | + | builds acid from | from API 50CH acid |
| 118349 | 17234 ChEBI | glucose | + | fermentation | |
| 118349 | 17234 ChEBI | glucose | + | degradation | |
| 68371 | 17754 ChEBI | glycerol | + | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 50CH acid |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | + | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | + | builds acid from | from API 50CH acid |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 118349 | 17716 ChEBI | lactose | + | fermentation | |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 118349 | 15792 ChEBI | malonate | - | assimilation | |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | + | builds acid from | from API 50CH acid |
| 68368 | 28053 ChEBI | melibiose | + | fermentation | from API 20E |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 118349 | 17632 ChEBI | nitrate | + | reduction | |
| 118349 | 16301 ChEBI | nitrite | + | reduction | |
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 118349 | 132112 ChEBI | sodium thiosulfate | - | builds gas from | |
| 68368 | 30911 ChEBI | sorbitol | + | fermentation | from API 20E |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 118349 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 118349 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 118349 | beta-galactosidase | + | 3.2.1.23 | |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 118349 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68382 | esterase (C 4) | - | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 118349 | gelatinase | + | ||
| 68368 | gelatinase | - | from API 20E | |
| 68382 | leucine arylamidase | - | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 118349 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 118349 | ornithine decarboxylase | + | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 118349 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 118349 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 118349 | urease | - | 3.5.1.5 | |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118349 | not determinedn.d. | + | - | +/- | + | + | + | - | - | - | + | + | + | + | - | + | + | - | + | + | - | - | + | - | +/- | +/- | - | - | + | + | + | - | + | - | - | - | +/- | - | - | - | - | - | - | - | + | - | - | + | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 66792 | ASM1037494v1 assembly for Escherichia coli ATCC 11229 | scaffold | 562 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Escherichia coli strain ATCC 11229 16S ribosomal RNA gene, partial sequence | GQ340751 | 1362 | 562 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 94.60 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 68.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 96.50 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 96.40 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.75 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.40 | no |
| 125438 | aerobic | aerobicⓘ | no | 60.75 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 85.95 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.50 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 73.36 | no |
| Title | Authors | Journal | DOI | Year | |
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| Novel Biodegradable Nanoparticulate Chain-End Functionalized Polyhydroxybutyrate-Caffeic Acid with Multifunctionalities for Active Food Coatings. | Abdelmalek F, Rofeal M, Pietrasik J, Steinbuchel A. | ACS Sustain Chem Eng | 10.1021/acssuschemeng.3c00389 | 2023 | |
| Identification of an Antimicrobial Peptide from the Venom of the Trinidad Thick-Tailed Scorpion Tityus trinitatis with Potent Activity against ESKAPE Pathogens and Clostridioides difficile. | Mechkarska M, Cunning TS, Taggart MG, Ternan NG, Leprince J, Coquet L, Jouenne T, Tena-Garces J, Calvete JJ, Conlon JM. | Antibiotics (Basel) | 10.3390/antibiotics12091404 | 2023 | |
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| Development of a LightCycler PCR assay for detection and quantification of Aspergillus fumigatus DNA in clinical samples from neutropenic patients. | Spiess B, Buchheidt D, Baust C, Skladny H, Seifarth W, Zeilfelder U, Leib-Mosch C, Morz H, Hehlmann R. | J Clin Microbiol | 10.1128/jcm.41.5.1811-1818.2003 | 2003 | |
| DNA microarray-based detection and identification of fungal pathogens in clinical samples from neutropenic patients. | Spiess B, Seifarth W, Hummel M, Frank O, Fabarius A, Zheng C, Morz H, Hehlmann R, Buchheidt D. | J Clin Microbiol | 10.1128/jcm.00942-07 | 2007 | |
| Specific detection of Aspergillus species in blood and bronchoalveolar lavage samples of immunocompromised patients by two-step PCR. | Skladny H, Buchheidt D, Baust C, Krieg-Schneider F, Seifarth W, Leib-Mosch C, Hehlmann R. | J Clin Microbiol | 10.1128/jcm.37.12.3865-3871.1999 | 1999 | |
| Antimicrobial potential of a new Streptomyces species isolated from a brazilian tropical coastal shrubland. | Rangel RR, Nhampossa NA, Dos Santos Costa D, Alviano DS, Alviano CS, do Nascimento RP. | Antonie Van Leeuwenhoek | 10.1007/s10482-025-02200-x | 2025 | |
| Anticancer and antimicrobial potential of novel xanthan gum derivatives synthesized via quaternary ammonium grafting | Onofre-Renteria K, Cobos-Puc LE, Silva-Belmares SY, Zugasti-Cruz A, Enriquez-Medrano FJ, Cabrera-Munguia DA, Oyervides-Munoz E. | Carbohydrate polymers. | 2025 | ||
| Anticancer and antimicrobial potential of novel xanthan gum derivatives synthesized via quaternary ammonium grafting. | Onofre-Renteria K, Cobos-Puc LE, Silva-Belmares SY, Zugasti-Cruz A, Enriquez-Medrano FJ, Cabrera-Munguia DA, Oyervides-Munoz E. | Carbohydr Polym | 10.1016/j.carbpol.2025.123536 | 2025 | |
| Suitability of Escherichia coli ATCC 11229 as Salmonella enterica surrogate for strawberry nectar pasteurization | Gedas A, Schmidt H, Weiss A. | Lebensm Wiss Technol | 2024 | ||
| Biogenic-Synthesized Silver Nanoparticles Using the Ligilactobacillus salivarius KC27L Postbiotic: Antimicrobial, Anti-Biofilm, and Antioxidant Activity and Cytotoxic Effects. | Yuksekdag Z, Kilickaya R, Kara F, Acar BC. | Probiotics Antimicrob Proteins | 10.1007/s12602-025-10481-x | 2025 | |
| Upcycling battery waste into Zn-BTC metal organic framework for dual applications in electrochemical sensing of uric acid and antibacterial applications. | Hossain MS, Aumi SA, Tarannum N, Chowdhury F, Sahadat Hossain M, Ahmed MF, Tanvir NI, Akhtar US, Ahmed S, Mobarak MB. | RSC Adv | 10.1039/d5ra04903b | 2025 | |
| In vitro evaluation the spectrum of antibacterial activity of botanical extracts and activity enhancement with outer membrane permeabilizers. | Gregory C, Langland J. | BMC Complement Med Ther | 10.1186/s12906-025-05147-8 | 2025 | |
| Antibacterial efficacy of novel bismuth-silver nanoparticles synthesis on Staphylococcus aureus and Escherichia coli infection models. | Castro-Valenzuela BE, Franco-Molina MA, Zarate-Trivino DG, Villarreal-Trevino L, Kawas JR, Garcia-Coronado PL, Sobrevilla-Hernandez G, Rodriguez-Padilla C. | Front Microbiol | 10.3389/fmicb.2024.1376669 | 2024 | |
| Comparative evaluation of amoxicillin loading and release behavior from waste-derived hydroxyapatite synthesized by solid-state and wet chemical routes. | Mobarak MB, Tabassum S, Hossain MS, Tarannum N, Chowdhury F, Sahadat Hossain M, Tanvir NI, Ahmed S. | RSC Adv | 10.1039/d5ra06021d | 2025 | |
| Deciphering Common Genetic Pathways to Antibiotic Resistance in Escherichia coli Using a MEGA-Plate Evolution System | Morales-Duran N, Leon-Buitimea A, Alvarez Martinez R, Morones-Ramirez J. | Antibiotics (Basel) | 2025 | ||
| In Vitro Evaluation of Halotolerant Bacillus velezensis 24.5 as a Promising Probiotic with Broad-Spectrum Antimicrobial Activity. | Diguta FC, Toma RC, Matei F. | Microorganisms | 10.3390/microorganisms13102240 | 2025 | |
| Innovative Biobased Active Composites of Cellulose Acetate Propionate with Tween 80 and Cinnamic Acid for Blueberry Preservation | Olewnik-Kruszkowska E, Ferri M, Degli Esposti M, Richert A, Fabbri P. | Polymers (Basel) | 2025 | ||
| Apple Extract as an Effective Silver Reducer in the Synthesis of Ag Nanoparticles. | Wasilewska A, Basa A, Zambrzycka M, Swiecicka I, Kalska-Szostko B. | Nanomaterials (Basel) | 10.3390/nano15080595 | 2025 | |
| Complete genome sequence of bacteriophages infecting Escherichia, Enterobacter, and Pseudomonas isolates. | Tejada AJP, Nada MAL, Chin RAD, Casidsid JYO, Ancla JB, Joloro MJG, Reterta MCC, Collado ARG, Berlin SC, Asejo AB, Yadao NMR, De Paz VP, Bigol UG, Gestuveo RJ. | Microbiol Resour Announc | 10.1128/mra.01345-24 | 2025 | |
| Ag-NP-Decorated Carbon Nanostructures: Synthesis, Characterization, and Antimicrobial Properties. | Siller-Ceniceros AA, Almonte-Flores DC, Sanchez-Castro ME, Martinez-Guerra E, Rodriguez-Varela J, Garcia Gomez NA, Morones-Ramirez JR. | ACS Omega | 10.1021/acsomega.3c08634 | 2024 | |
| Haloamines of the Neurotransmitter gamma-Aminobutyric Acid (GABA) and Its Ethyl Ester: Mild Oxidants for Reactions in Hydrophobic Microenvironments and Bactericidal Activity. | Bertozo LC, Nagl M, Ximenes VF. | Molecules | 10.3390/molecules30214227 | 2025 | |
| From discarded to desired: valorization of Zn-C battery waste into crystalline ZnO nanoparticles with crystallographic insights and antibacterial efficacy. | Mobarak MB, Hossain MS, Chowdhury F, Tarannum N, Binte Mesbah M, Tanvir NI, Akhtar US, Ahmed S. | RSC Adv | 10.1039/d5ra06684k | 2025 | |
| Estimating the optimal efflux inhibitor concentration of carvacrol as a function of the bacterial physiological state. | Janosity A, Baranyi J, Suranyi BB, Mozina SS, Taczman-Bruckner A, Kisko G, Klancnik A. | Front Microbiol | 10.3389/fmicb.2023.1073798 | 2023 | |
| Intraspecific variation in antibiotic resistance potential within E. coli. | Suarez SA, Martiny AC. | Microbiol Spectr | 10.1128/spectrum.03162-23 | 2024 | |
| Shedding light on the problem: Influence of the radiator power, source-sample distance, and exposure time on the performance of UV-C lamps in laboratory and real-world conditions. | Arkusz K, Pasik K, Jedrzejewska A, Klekiel T, Wozniak W, Nycz M, Stryjski R. | PLoS One | 10.1371/journal.pone.0302258 | 2024 | |
| Citronellol-functionalized natural silica: a biogenic approach for antifungal and antibacterial material applications. | Lopez GP, Roque LB, Igal K, Espinosa EG, Bellotti N. | Front Chem | 10.3389/fchem.2025.1535787 | 2025 | |
| Dual Biopolymer Layer Using Nanoparticles with Active Substance Enclosed in Microcapsules: Innovative Solution for Slow Release of Ginkgo biloba L. Extract for Potential Therapies. | Sitarek P, Owczarek M, Kowalczyk T, Kukula-Koch W, Lason-Rydel M, Herczynska L. | Int J Mol Sci | 10.3390/ijms26073066 | 2025 | |
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| Preparation and Biochemical and Microbial Behavior of Poly(Lactide) Composites with Polyethersulfone and Copper-Complexed Cellulose Phosphate. | Kudzin MH, Mrozinska Z, Kaczmarek A, Chrusciel JJ, Gloc M, Zylla R. | Materials (Basel) | 10.3390/ma18132954 | 2025 | |
| Tannic Acid-Modified Sodium Caseinate Pickering Emulsion Coatings: Characterization, Enhanced Mechanical/Antibacterial Properties, and Application in Cherry Tomato Preservation. | Feng Q, Wang H, Yang X, Wang L, Li T, Guo L, Jia S, Yang Y, Yu Y, Zhang S. | Foods | 10.3390/foods14183190 | 2025 | |
| Total Synthesis of Cyclosenegalin A. | Aloanis AA, Herlina T, Hardianto A, Maharani R. | ChemistryOpen | 10.1002/open.202400175 | 2024 | |
| From Forest to Fork: Antioxidant and Antimicrobial Potential of Laetiporus sulphureus (Bull.) Murrill in Cooked Sausages | Novakovic A, Karaman M, Sojic B, Ikonic P, Peulic T, Tomic J, Sipovac M. | Microorganisms | 2025 | ||
| Chemical Profile of Kumquat (Citrus japonica var. margarita) Essential Oil, In Vitro Digestion, and Biological Activity. | Vrca I, Fredotovic Z, Jug B, Nazlic M, Dunkic V, Jug D, Radic J, Mozina SS, Restovic I. | Foods | 10.3390/foods13223545 | 2024 | |
| Physical-Chemical Assessment and Antimicrobial Activity of Chlortetracycline-Loaded Collagen Sponges. | Tihan GT, Ungureanu C, Rau I, Zgarian RG, Barbaresso RC, Albu Kaya MG, Dinu-Pirvu CE, Ghica MV. | Materials (Basel) | 10.3390/ma18174029 | 2025 | |
| An In-Situ Fabrication Method of ZnO and Other Zn(II) Compounds Containing Polypropylene Composites. | Kupinska K, Michalik M, Krajenta J, Bielicka M, Markiewicz KH, Kalska-Szostko B, Wilczewska AZ. | Int J Mol Sci | 10.3390/ijms24032357 | 2023 | |
| Fungal beta-Glucans Enhance Lactic Acid Bacteria Growth by Shortening Their Lag Phase and Increasing Growth Rate. | Buksa A, Petrovic F, Maglica Z. | Microorganisms | 10.3390/microorganisms13061313 | 2025 | |
| Preparation and characterization of lemongrass oil nanoemulsion: Antimicrobial, antibiofilm, antioxidant, and anticancer activities. | Selim MT, Badr BM, Salem SS, Elkady FM, Abdel-Maksoud MA, Issa NI, Sobhy KM, Shaban KM, Abdallah AA, Sabeq AM, Alamri A, Zaky MY, Aloufi AS, Hashem AH. | Open Life Sci | 10.1515/biol-2025-1159 | 2025 | |
| Comparative Study of Collagen Gels Extracted from Different Sources. | Coman AE, Marin MM, Rosca AM, Tutuianu R, Albu Kaya MG, Ionita A, Constantinescu RR, Titorencu I. | Gels | 10.3390/gels11110879 | 2025 | |
| Self-assembled BiFeO3@MIL-101 nanocomposite for antimicrobial applications under natural sunlight. | Pulvirenti L, Lombardo C, Salmeri M, Bongiorno C, Mannino G, Lo Presti F, Cambria MT, Condorelli GG. | Discov Nano | 10.1186/s11671-023-03883-9 | 2023 | |
| How Bacteria Change after Exposure to Silver Nanoformulations: Analysis of the Genome and Outer Membrane Proteome. | Kedziora A, Speruda M, Wernecki M, Dudek B, Kapczynska K, Krzyzewska E, Rybka J, Bugla-Ploskonska G. | Pathogens | 10.3390/pathogens10070817 | 2021 | |
| Chemical Composition and Biological Activity of Essential Oil and Extract from the Seeds of Tropaeolum majus L. var. altum. | Vrca I, Ramic D, Fredotovic Z, Smole Mozina S, Blazevic I, Bilusic T. | Food Technol Biotechnol | 10.17113/ftb.60.04.22.7667 | 2022 | |
| Foodborne bacteria in milk and milk products along the water buffalo milk chain in Bangladesh. | Singha S, Koop G, Rahman MM, Ceciliani F, Howlader MMR, Boqvist S, Cremonesi P, Hoque MN, Persson Y, Lecchi C. | Sci Rep | 10.1038/s41598-024-67705-3 | 2024 | |
| Experimental and Theoretical Analysis of Dopamine Polymerization on the Surface of Cellulose Nanocrystals and Its Reinforcing Properties in Cellulose Acetate Films. | Souza AL, Oliveira AVA, Ribeiro LD, Moraes ARFE, Jesus M, Santos J, Oliveira TV, Soares NFF. | Polymers (Basel) | 10.3390/polym17030345 | 2025 | |
| Exploring the biological activities of the Origanum majorana essential oil nanoemulsion: antimicrobial, antibiofilm, antioxidant and anticancer activities | Hashem A, Ibrahim N, Badr B, Selim M, Elkady F, Issa N, Sobhy K, Shaban K, Abdallah A, Sabeq A, Hassanin M, Basher N, Alsalamah S, Nasr F, Salem S. | RSC Adv | 2025 | ||
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| #445 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 787 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #35145 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68368 | Automatically annotated from API 20E . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #118349 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103795 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data