Escherichia coli CIP 109776 is a facultative anaerobe, Gram-negative, rod-shaped bacterium of the family Enterobacteriaceae.
Gram-negative rod-shaped facultative anaerobe Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Gram stain | Cell shape | Motility | |
|---|---|---|---|---|
| 36832 | negative | rod-shaped |
| @ref | Name | Growth | Composition | Medium link | |
|---|---|---|---|---|---|
| 36832 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 36832 | CIP Medium 72 | Medium recipe at CIP |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 36832 | positive | growth | 37 |
| 36832 | Oxygen tolerancefacultative anaerobe |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | + | 3.2.1.31 | from API zym |
| 36832 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 36832 | oxidase | - | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 36832 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 36832 | 1 | Risk group (French classification) |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Laboratory strains of Escherichia coli K-12: things are seldom what they seem. | Browning DF, Hobman JL, Busby SJW. | Microb Genom | 10.1099/mgen.0.000922 | 2023 | ||
| Phylogeny | Origin of the Mobile Di-Hydro-Pteroate Synthase Gene Determining Sulfonamide Resistance in Clinical Isolates. | Sanchez-Osuna M, Cortes P, Barbe J, Erill I. | Front Microbiol | 10.3389/fmicb.2018.03332 | 2018 | |
| Metabolism | Systems analysis of methylerythritol-phosphate pathway flux in E. coli: insights into the role of oxidative stress and the validity of lycopene as an isoprenoid reporter metabolite. | Bongers M, Chrysanthopoulos PK, Behrendorff JB, Hodson MP, Vickers CE, Nielsen LK. | Microb Cell Fact | 10.1186/s12934-015-0381-7 | 2015 | |
| Unraveling topoisomerase IA gate dynamics in presence of PPEF and its preclinical evaluation against multidrug-resistant pathogens. | Maurya V, Singh R, Singh RK, Pandey S, Yadav P, Parashar P, Gaind R, Dubey KD, Naresh Patwari G, Tandon V. | Commun Biol | 10.1038/s42003-023-04412-1 | 2023 | ||
| Pathogenicity | Synergistic efficacy of Bisbenzimidazole and Carbonyl Cyanide 3-Chlorophenylhydrazone combination against MDR bacterial strains. | Sinha D, Pandey S, Singh R, Tiwari V, Sad K, Tandon V. | Sci Rep | 10.1038/srep44419 | 2017 | |
| Loss of the spacer loop sequence from the rrnB operon in the Escherichia coli K-12 subline that bears the relA1 mutation. | Harvey S, Hill CW, Squires C, Squires CL. | J Bacteriol | 10.1128/jb.170.3.1235-1238.1988 | 1988 | ||
| Enzymology | Rapid and accurate identification of Escherichia coli K-12 strains. | Kuhnert P, Nicolet J, Frey J. | Appl Environ Microbiol | 10.1128/aem.61.11.4135-4139.1995 | 1995 | |
| Genetics | Improved bacterial baby machine: application to Escherichia coli K-12. | Helmstetter CE, Eenhuis C, Theisen P, Grimwade J, Leonard AC. | J Bacteriol | 10.1128/jb.174.11.3445-3449.1992 | 1992 | |
| Metabolism | Genetic locus, distant from ptsM, affecting enzyme IIA/IIB function in Escherichia coli K-12. | Roehl RA, Vinopal RT. | J Bacteriol | 10.1128/jb.142.1.120-130.1980 | 1980 | |
| Physiological studies of Escherichia coli strain MG1655: growth defects and apparent cross-regulation of gene expression. | Soupene E, van Heeswijk WC, Plumbridge J, Stewart V, Bertenthal D, Lee H, Prasad G, Paliy O, Charernnoppakul P, Kustu S. | J Bacteriol | 10.1128/jb.185.18.5611-5626.2003 | 2003 | ||
| Metabolism | Substrate binding site for nitrate reductase of Escherichia coli is on the inner aspect of the membrane. | Kristjansson JK, Hollocher TC. | J Bacteriol | 10.1128/jb.137.3.1227-1233.1979 | 1979 | |
| Isolation and preliminary characterization of single amino acid substitution mutants of aspartate carbamoyltransferase. | Kantrowitz ER, Foote J, Reed HW, Vensel LA. | Proc Natl Acad Sci U S A | 10.1073/pnas.77.6.3249 | 1980 | ||
| Metabolism | Comparison among patterns of macromolecular synthesis in Escherichia coli B/r at growth rates of less and more than one doubling per hour at 37 degrees C. | Pierucci O, Melzer M, Querini C, Rickert M, Krajewski C. | J Bacteriol | 10.1128/jb.148.2.684-696.1981 | 1981 | |
| Metabolism | 13N isotope studies on the pathway of ammonia assimilation in Bacillus megaterium and Escherichia coli. | Kim CH, Hollocher TC. | J Bacteriol | 10.1128/jb.151.1.358-366.1982 | 1982 | |
| Enzymology | Ornithine transcarbamylase from Salmonella typhimurium: purification, subunit composition, kinetic analysis, and immunological cross-reactivity. | Abdelal AT, Kennedy EH, Nainan O. | J Bacteriol | 10.1128/jb.129.3.1387-1396.1977 | 1977 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #36832 | Collection of Institut Pasteur ; Curators of the CIP; CIP 109776 |
| #68382 | Automatically annotated from API zym . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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