Escherichia coli EDL 931 is a facultative anaerobe, Gram-negative, motile prokaryote that was isolated from Human, Stool.
Gram-negative motile rod-shaped facultative anaerobe genome sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Gram stain | Cell shape | Motility | |
|---|---|---|---|---|
| 118348 | negative | rod-shaped |
| @ref | Name | Growth | Medium link | |
|---|---|---|---|---|
| 118348 | CIP Medium 3 | Medium recipe at CIP |
| 118348 | Oxygen tolerancefacultative anaerobe |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 118348 | 16947 ChEBI | citrate | - | carbon source | |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | + | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 118348 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68371 | 16813 ChEBI | galactitol | + | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | + | builds acid from | from API 50CH acid |
| 118348 | 17234 ChEBI | glucose | + | fermentation | |
| 118348 | 17234 ChEBI | glucose | + | degradation | |
| 68371 | 17754 ChEBI | glycerol | + | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | + | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | + | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 118348 | 17716 ChEBI | lactose | + | fermentation | |
| 118348 | 15792 ChEBI | malonate | - | assimilation | |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 118348 | 29864 ChEBI | mannitol | + | fermentation | |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | + | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 118348 | 17632 ChEBI | nitrate | + | reduction | |
| 118348 | 16301 ChEBI | nitrite | + | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | + | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 118348 | 132112 ChEBI | sodium thiosulfate | - | builds gas from | |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 118348 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 118348 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | + | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 118348 | beta-galactosidase | + | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 118348 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 118348 | gelatinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 118348 | lysine decarboxylase | + | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 118348 | ornithine decarboxylase | + | 4.1.1.17 | |
| 118348 | oxidase | - | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 118348 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118348 | not determinedn.d. | + | - | +/- | + | + | + | - | - | - | + | + | + | + | +/- | + | + | - | + | +/- | - | - | + | - | - | - | - | - | + | + | + | + | + | - | - | + | - | - | - | - | - | - | - | - | + | - | - | + | - | - |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | Isolation date | |
|---|---|---|---|---|---|---|---|
| 118348 | Human, Stool | Oregon | United States of America | USA | North America | 1982 |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 118348 | 3 | Risk group (French classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | IMG accession | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM1316807v1 assembly for Escherichia coli O157:H7 ATCC 35150 | complete | 83334 | 98.79 | ||||
| 124043 | ASM93507v1 assembly for Escherichia coli ATCC 35150 NalR | contig | 562 | 50.87 | ||||
| 124043 | ASM93486v1 assembly for Escherichia coli ATCC 35150 | contig | 562 | 31.08 | ||||
| 124043 | O199v4 assembly for Escherichia coli ATCC 35150 | contig | 1389955 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Rectal single dose immunization of mice with Escherichia coli O157:H7 bacterial ghosts induces efficient humoral and cellular immune responses and protects against the lethal heterologous challenge. | Mayr UB, Kudela P, Atrasheuskaya A, Bukin E, Ignatyev G, Lubitz W. | Microb Biotechnol | 10.1111/j.1751-7915.2011.00316.x | 2012 | ||
| Bacterial ghosts as an oral vaccine: a single dose of Escherichia coli O157:H7 bacterial ghosts protects mice against lethal challenge. | Mayr UB, Haller C, Haidinger W, Atrasheuskaya A, Bukin E, Lubitz W, Ignatyev G. | Infect Immun | 10.1128/iai.73.8.4810-4817.2005 | 2005 | ||
| Genetics | Effects of UVC Treatment on Biofilms of Escherichia coli Strains Formed at Different Temperatures and Maturation Periods. | Kyoung M, Lee JI, Kim SS. | Foods | 10.3390/foods14173091 | 2025 | |
| Amyloid beta-peptide multimer expressed in green algae efficiently inhibits bacteria growth by disrupting cell membrane permeability. | Hu YY, Liu YX, Sun SN, Fan ZC. | Sci Rep | 10.1038/s41598-025-16109-y | 2025 | ||
| Inhibitory effect of cell-free supernatants of Pedicoccous acidilactici and Latilactobacillus sakei/Staphylococcus xylosus in combination with ethylenediaminetetraacetic acid against Escherichia coli O157:H7 strains. | Incili GK, Ilhak OI, Calicioglu M. | Vet Res Forum | 10.30466/vrf.2025.2035776.4368 | 2025 | ||
| Complete genome sequence of the Listeria innocua lytic bacteriophage LIS04. | Park S, Chang Y. | Microbiol Resour Announc | 10.1128/mra.00249-25 | 2025 | ||
| Synergistic Effects of Combined Flavourzyme and Floating Electrode-Dielectric Barrier Discharge Plasma on Reduction of Escherichia coli Biofilms in Squid (Todarodes pacificus). | Kim SH, Roy PK, Park SY. | Microorganisms | 10.3390/microorganisms12061188 | 2024 | ||
| Robust and safe: Unveiling Bacillus clausii OHRC1's potential as a versatile probiotic for enhanced food quality and safety | Chelliah R, Kim NH, Rubab M, Yeon SJ, Barathikannan K, Vijayalakshmi S, Hirad AH, Oh DH. | Lebensm Wiss Technol | 2024 | |||
| Isolation and Purification of Antibacterial Compound from Kombucha of SCOBY. | Nam Y, Lee J, Kim SR, Kim JN. | J Microbiol Biotechnol | 10.4014/jmb.2504.04012 | 2025 | ||
| Survival of Escherichia coli O157:H7 in Soils Along a Natural pH Gradient. | Lyu G, Li H, Hu J, Ma J. | Microorganisms | 10.3390/microorganisms13112492 | 2025 | ||
| Effects of Electron Beam Irradiation on the Storage Stability and Quality Characteristics of Chicken and Duck Meat. | Kang KM, Kim HY. | Foods | 10.3390/foods14223867 | 2025 | ||
| Escherichia coli O157:H7, a Common Contaminant of Raw Milk from Ecuador: Isolation and Molecular Identification. | Loor-Giler A, Robayo-Chico M, Puga-Torres B, Hernandez-Alomia F, Santander-Parra S, Piantino Ferreira A, Muslin C, Nunez L. | Foods | 10.3390/foods14030410 | 2025 | ||
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| Enhanced Detection of Viable Escherichia coli O157:H7 in Romaine Lettuce Wash Water Using On-Filter Propidium Monoazide-Quantitative PCR. | Chen Z. | Microorganisms | 10.3390/microorganisms13010034 | 2024 | ||
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| Complete Genome Sequence of Bacteriophage EO1, Which Infects Both Escherichia coli O157:H7 and Shigella. | Choi J, Chang Y. | Microbiol Resour Announc | 10.1128/mra.00177-23 | 2023 | ||
| Inactivation Efficacy of Combination Treatment of Propyl Gallate and UVA LED for Escherichia coli O157:H7 in Apple Juice | Cho Y, Kang D, Kim D. | Journal of food science. | 2025 | |||
| Effects of electrolysed water combined with ultrasound on inactivation kinetics and metabolite profiles of Escherichia coli biofilms on food contact surface | Zhao L, Poh CN, Wu J, Zhao X, He Y, Yang H. | Innovative food science & emerging technologies : IFSET : the official scientific journal of the European Federation of Food Science and Technology. | 2022 | |||
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| Genetics | Bacteriophage cocktail LEC2-LEC10 for broad-spectrum control of pathogenic and uncharacterized Escherichia coli in fresh produce | Kim E, Ryu S, Lim J. | Front Microbiol | 2025 | ||
| Analysis of Industrial Bacillus Species as Potential Probiotics for Dietary Supplements. | Lubkowska B, Jezewska-Frackowiak J, Sroczynski M, Dzitkowska-Zabielska M, Bojarczuk A, Skowron PM, Cieszczyk P. | Microorganisms | 10.3390/microorganisms11020488 | 2023 | ||
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| Phylogeny | Bacterial microbiota associated with raw plant-based meat analogue products and their influences on selective enrichment for Escherichia coli O157:H7. | Capitani S, Brown LP, Carrillo CD, Lau CH. | Curr Res Food Sci | 10.1016/j.crfs.2024.100944 | 2025 | |
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| Microbiological quality assessment of fresh produce: Potential health risk to children and urgent need for improved food safety in school feeding schemes. | Msimango T, Duvenage S, Du Plessis EM, Korsten L. | Food Sci Nutr | 10.1002/fsn3.3506 | 2023 | ||
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| In vitro characterization the antioxidant and antibacterial properties of hemp (Cannabis sativa spp.) varieties cultivated in Northern Alabama. | Dudley A, Kassama LS, Jackson-Davis A, Cebert E, Kuang X. | J Cannabis Res | 10.1186/s42238-025-00258-y | 2025 | ||
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| Biotechnology | Foodborne bacteria in milk and milk products along the water buffalo milk chain in Bangladesh. | Singha S, Koop G, Rahman MM, Ceciliani F, Howlader MMR, Boqvist S, Cremonesi P, Hoque MN, Persson Y, Lecchi C. | Sci Rep | 10.1038/s41598-024-67705-3 | 2024 | |
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| Antimicrobial Effects and Antioxidant Activity of Myrtus communis L. Essential Oil in Beef Stored under Different Packaging Conditions. | Moura D, Vilela J, Saraiva S, Monteiro-Silva F, De Almeida JMMM, Saraiva C. | Foods | 10.3390/foods12183390 | 2023 | ||
| Combined effect of various salt concentrations and lactic acid bacteria fermentation on the survival of Escherichia coli O157:H7 and Listeria monocytogenes in white kimchi at different temperatures. | Kim JY, Bae YM, Lee SY. | Food Sci Biotechnol | 10.1007/s10068-021-00979-9 | 2021 | ||
| Biotechnology | Monitoring the Bioprotective Potential of Lactiplantibacillus pentosus Culture on Pathogen Survival and the Shelf-Life of Fresh Ready-to-Eat Salads Stored under Modified Atmosphere Packaging. | Doukaki A, Papadopoulou OS, Tzavara C, Mantzara AM, Michopoulou K, Tassou C, Skandamis P, Nychas GJ, Chorianopoulos N. | Pathogens | 10.3390/pathogens13070557 | 2024 | |
| Treatment of Clinically Important Bacteria With Cold Atmospheric Plasma. | Ding R, Song J, Huang X, Tan L, Rao X, Yang Y. | Microb Biotechnol | 10.1111/1751-7915.70219 | 2025 | ||
| Investigation of efficient thermal inactivation parameters of Escherichia coli O157:H7 in meatballs by grilling. | Tosuncuk O, Bozatli SB, Dikici A. | J Food Sci Technol | 10.1007/s13197-023-05710-6 | 2023 | ||
| Accumulation of colicin M protein and its biological activity in transgenic lettuce and mizuna plants. | Shcherbak N, Prochaska H, Lystvan K, Prokhorova Y, Giritch A, Kuchuk M. | Front Plant Sci | 10.3389/fpls.2023.1271757 | 2023 | ||
| Potential for Bacteriophage Cocktail to Complement Commercial Sanitizer Use on Produce Against Escherichia coli O157:H7. | Vengarai Jagannathan B, Kitchens S, Vijayakumar PP, Price S, Morgan M. | Microorganisms | 10.3390/microorganisms8091316 | 2020 | ||
| Inactivation of Escherichia coli, Salmonella enterica, and Listeria monocytogenes using the Contamination Sanitization Inspection and Disinfection (CSI-D) device. | McCoy Sanders J, Alarcon V, Marquis G, Tabb A, Van Kessel JA, Sonnier J, Haley BJ, Baek I, Qin J, Kim M, Vasefi F, Sokolov S, Hellberg RS. | Heliyon | 10.1016/j.heliyon.2024.e30490 | 2024 | ||
| Environmental DNA transformation resulted in an active phage in Escherichia coli. | Karaynir A, Bozdogan B, Salih Dogan H. | PLoS One | 10.1371/journal.pone.0292933 | 2023 | ||
| Effect of Optimized UV-LED Technology on Modeling, Inactivation Kinetics and Microbiological Safety in Tomato Juice. | Salazar F, Pizarro-Oteiza S, Molinett S, Labbe M. | Foods | 10.3390/foods13030430 | 2024 | ||
| Diagnostic Performance of a Molecular Assay in Synovial Fluid Targeting Dominant Prosthetic Joint Infection Pathogens | Lee J, Baek E, Ahn H, Park H, Lee S, Kim S. | Microorganisms | 2024 | |||
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| Influence of cheese making process on STEC bacteriophage release. | Mangieri N, Vieira RP, Picozzi C. | Front Microbiol | 10.3389/fmicb.2023.1270346 | 2023 | ||
| Fabrication and Characterization of Chitosan and Gelatin-Based Antimicrobial Films Incorporated with Different Essential Oils | Asghar L, Sahar A, Khan M, Shahid M. | Foods | 2024 | |||
| Vitex Genus as a Source of Antimicrobial Agents. | Islam Z, Caldeira GI, Canica M, Islam N, Silva O. | Plants (Basel) | 10.3390/plants13030401 | 2024 | ||
| Efficacy of Bacteriophage Cocktail to Control E. coli O157:H7 Contamination on Baby Spinach Leaves in the Presence or Absence of Organic Load. | Vengarai Jagannathan B, Kitchens S, Priyesh Vijayakumar P, Price S, Morgan M. | Microorganisms | 10.3390/microorganisms9030544 | 2021 | ||
| Europium Nanoparticle-Based Lateral Flow Strip Biosensors Combined with Recombinase Polymerase Amplification for Simultaneous Detection of Five Zoonotic Foodborne Pathogens. | Jin B, Ma B, Mei Q, Xu S, Deng X, Hong Y, Li J, Xu H, Zhang M. | Biosensors (Basel) | 10.3390/bios13060652 | 2023 | ||
| Pathogenicity | Safety, Antagonistic Activity, and Probiotic Properties of Lactic Acid Bacteria Isolated from Jeotgal, Korean Fermented Seafoods. | Baek J, Kim BS, Kim Y, Bai J. | J Microbiol Biotechnol | 10.4014/jmb.2411.11055 | 2024 | |
| Antibacterial, antioxidant activities of lactic acid bacteria-bioconversioned almond extract. | Lee K, Lee D, Lee G, Lee W, Lee KG. | Food Sci Biotechnol | 10.1007/s10068-023-01450-7 | 2024 | ||
| The Distribution and Antibacterial Activity of Marine Sponge-Associated Bacteria in the Aegean Sea and the Sea of Marmara, Turkey. | Altug G, Ciftci Turetken PS, Kalkan S, Topaloglu B. | Curr Microbiol | 10.1007/s00284-021-02489-7 | 2021 | ||
| Ferrous sulfate combined with ultrasound emulsified cinnamaldehyde nanoemulsion to cause ferroptosis in Escherichia coli O157:H7. | Sun J, Shen QJ, Pan JN, Zheng X, Yu T, Zhou WW. | Ultrason Sonochem | 10.1016/j.ultsonch.2024.106884 | 2024 | ||
| Simultaneous quantitative screening of 53 phytochemicals from Rheum tataricum L. roots: a comparative study of supercritical CO2, subcritical ethanol, and ultrasound-assisted extraction for enhanced antioxidant, antibacterial activities, and molecular docking study. | Amangeldinova M, Ersatir M, Necip A, Yilmaz MA, Cimentepe M, Kudrina N, Terletskaya NV, Ozturk Cimentepe O, Yildirim M. | Front Plant Sci | 10.3389/fpls.2024.1513875 | 2024 | ||
| Antimicrobial property of Pichia pastoris-derived natto peptide against foodborne bacteria and its preservative potential to maintain pork quality during refrigerated storage. | Dong B, Yu C, Lin Y, Zhou G, Sun C, Wang J, Wu T. | Food Sci Nutr | 10.1002/fsn3.2722 | 2022 | ||
| Evaluation of Aging Effect on the Durability of Antibacterial Treatments Applied on Textile Materials for the Automotive Industry | Arese M, Mania I, Brunella V, Lambertini V, Gorra R. | ACS Omega | 2024 | |||
| Biotechnology | Identification and characterization of lytic bacteriophages specific to foodborne pathogenic Escherichia coli O157:H7. | Yildirim Z, Sakin T, Akcelik M, Akcelik N. | Food Sci Technol Int | 10.1177/1082013220929836 | 2021 | |
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| Novel metal peroxide nanoboxes restrain Clostridioides difficile infection beyond the bactericidal and sporicidal activity. | Yang LX, Lai YH, Cheung CI, Ye Z, Huang TC, Wang YC, Chin YC, Chia ZC, Chen YJ, Li MJ, Tseng HY, Tsai YT, Zhang ZB, Chen KH, Tsai BY, Shieh DB, Lee NY, Tsai PJ, Huang CC. | Bioeng Transl Med | 10.1002/btm2.10593 | 2023 | ||
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| Diversity of Non-O157 Shiga Toxin-Producing Escherichia coli Isolated from Cattle from Central and Southern Chile. | Diaz L, Gutierrez S, Moreno-Switt AI, Herve LP, Hamilton-West C, Padola NL, Navarrete P, Reyes-Jara A, Meng J, Gonzalez-Escalona N, Toro M. | Animals (Basel) | 10.3390/ani11082388 | 2021 | ||
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| Clove Buds Essential Oil: The Impact of Grinding on the Chemical Composition and Its Biological Activities Involved in Consumer's Health Security. | Ben Hassine D, Kammoun El Euch S, Rahmani R, Ghazouani N, Kane R, Abderrabba M, Bouajila J. | Biomed Res Int | 10.1155/2021/9940591 | 2021 | ||
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| The Expression of Antibacterial Peptide Turgencin A in Pichia pastoris and an Analysis of Its Antibacterial Activity. | Dong C, Li M, Zhang R, Lu W, Xu L, Liu J, Chu X. | Molecules | 10.3390/molecules28145405 | 2023 | ||
| Pathogenicity | Responses of Escherichia coli and Listeria monocytogenes to ozone treatment on non-host tomato: Efficacy of intervention and evidence of induced acclimation. | Shu X, Singh M, Karampudi NBR, Bridges DF, Kitazumi A, Wu VCH, De Los Reyes BG. | PLoS One | 10.1371/journal.pone.0256324 | 2021 | |
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| Pathogenicity | Sanitization Efficacy of Slightly Acidic Electrolyzed Water against pure cultures of Escherichia coli, Salmonella enterica, Typhimurium, Staphylococcus aureus and Bacillus cereus spores, in Comparison with Different Water Hardness. | Kim HJ, Tango CN, Chelliah R, Oh DH. | Sci Rep | 10.1038/s41598-019-40846-6 | 2019 | |
| A sandwich-type bacteriophage-based amperometric biosensor for the detection of Shiga toxin-producing Escherichia coli serogroups in complex matrices. | Quintela IA, Wu VCH. | RSC Adv | 10.1039/d0ra06223e | 2020 | ||
| Rapid, Quantitative, High-Sensitive Detection of Escherichia coli O157:H7 by Gold-Shell Silica-Core Nanospheres-Based Surface-Enhanced Raman Scattering Lateral Flow Immunoassay. | Shi L, Xu L, Xiao R, Zhou Z, Wang C, Wang S, Gu B. | Front Microbiol | 10.3389/fmicb.2020.596005 | 2020 | ||
| Metabolism | Stress Resistance Development and Genome-Wide Transcriptional Response of Escherichia coli O157:H7 Adapted to Sublethal Thymol, Carvacrol, and trans-Cinnamaldehyde. | Yuan W, Seng ZJ, Kohli GS, Yang L, Yuk HG. | Appl Environ Microbiol | 10.1128/aem.01616-18 | 2018 | |
| Rapid detection of E. coli O157:H7 by a novel access with combination of improved sample preparation and real-time PCR. | Kim JH, Oh SW. | Food Sci Biotechnol | 10.1007/s10068-020-00758-y | 2020 | ||
| In Vitro Antioxidant and Antimicrobial Properties of Flower, Leaf, and Stem Extracts of Korean Mint. | Park CH, Yeo HJ, Baskar TB, Park YE, Park JS, Lee SY, Park SU. | Antioxidants (Basel) | 10.3390/antiox8030075 | 2019 | ||
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| Adhesion of marine cryptic Escherichia isolates to human intestinal epithelial cells. | Vignaroli C, Di Sante L, Magi G, Luna GM, Di Cesare A, Pasquaroli S, Facinelli B, Biavasco F. | ISME J | 10.1038/ismej.2014.164 | 2015 | ||
| Green Extraction Approach for Isolation of Bioactive Compounds in Wild Thyme (Thymus serpyllum L.) Herbal Dust-Chemical Profile, Antioxidant and Antimicrobial Activity and Comparison with Conventional Techniques. | Mrkonjic Z, Kaplan M, Milosevic S, Bozovic D, Sknepnek A, Miletic D, Lazarevic Mrkonjic I, Rakic D, Zekovic Z, Pavlic B. | Plants (Basel) | 10.3390/plants13060897 | 2024 | ||
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| Antioxidant and Antibacterial Properties of Hovenia (Hovenia dulcis) Monofloral Honey Produced in South Korea. | Park SH, Kim YK, Kim MS, Lee SH. | Food Sci Anim Resour | 10.5851/kosfa.2020.e6 | 2020 | ||
| Pathogenicity | The combined effect of high pressure processing and dimethyl dicarbonate to inactivate foodborne pathogens in apple juice. | Petrus RR, Churey JJ, Humiston GA, Cheng RM, Worobo RW. | Braz J Microbiol | 10.1007/s42770-019-00145-8 | 2020 | |
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| Inactivation effect of UV-C and mild heat treatment against Salmonella Typhimurium and Escherichia coli O157:H7 on black pepper powder. | Park MJ, Kim JH, Oh SW. | Food Sci Biotechnol | 10.1007/s10068-018-0480-4 | 2019 | ||
| Direct capture and amplification of nucleic acids using a universal, elution-free magnetic bead-based method for rapid pathogen detection in multiple types of biological samples. | Jiang Q, Li Y, Huang L, Guo J, Wang A, Ma C, Shi C. | Anal Bioanal Chem | 10.1007/s00216-022-04422-8 | 2023 | ||
| Replacement of l-Amino Acids by d-Amino Acids in the Antimicrobial Peptide Ranalexin and Its Consequences for Antimicrobial Activity and Biodistribution. | Domhan C, Uhl P, Kleist C, Zimmermann S, Umstatter F, Leotta K, Mier W, Wink M. | Molecules | 10.3390/molecules24162987 | 2019 | ||
| Phylogeny | Age related differences in phylogenetic diversity, prevalence of Shiga toxins, Intimin, Hemolysin genes and select serogroups of Escherichia. coli from pastured meat goats detected in a longitudinal cohort study. | Ndegwa E, Alahmde A, Kim C, Kaseloo P, O'Brien D. | BMC Vet Res | 10.1186/s12917-020-02479-0 | 2020 | |
| Pathogenicity | Multiple antibiotic resistances among Shiga toxin producing Escherichia coli O157 in feces of dairy cattle farms in Eastern Cape of South Africa. | Iweriebor BC, Iwu CJ, Obi LC, Nwodo UU, Okoh AI. | BMC Microbiol | 10.1186/s12866-015-0553-y | 2015 | |
| Temperature-Controlled Reversible Exposure and Hiding of Antimicrobial Peptides on an Implant for Killing Bacteria at Room Temperature and Improving Biocompatibility in Vivo. | Zhan J, Wang L, Zhu Y, Gao H, Chen Y, Chen J, Jia Y, He J, Fang Z, Zhu Y, Mao C, Ren L, Wang Y. | ACS Appl Mater Interfaces | 10.1021/acsami.8b14534 | 2018 | ||
| Use of Potential Probiotic Lactic Acid Bacteria (LAB) Biofilms for the Control of Listeria monocytogenes, Salmonella Typhimurium, and Escherichia coli O157:H7 Biofilms Formation. | Gomez NC, Ramiro JM, Quecan BX, de Melo Franco BD. | Front Microbiol | 10.3389/fmicb.2016.00863 | 2016 | ||
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| Numerical analysis of rectangular type batch ohmic heater to identify the cold point. | Choi W, Kim SS, Park SH, Ahn JB, Kang DH. | Food Sci Nutr | 10.1002/fsn3.1353 | 2020 | ||
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| Enzymology | Multiplex Detection of Three Select Agents Directly from Blood by Use of the GeneXpert System. | Banada PP, Deshpande S, Banik S, Shah D, Koshy R, Patel B, Kwiatkowski R, Persing D, Alland D. | J Clin Microbiol | 10.1128/jcm.00036-19 | 2019 | |
| Development of a Droplet Digital Polymerase Chain Reaction for Rapid and Simultaneous Identification of Common Foodborne Pathogens in Soft Cheese. | Cremonesi P, Cortimiglia C, Picozzi C, Minozzi G, Malvisi M, Luini M, Castiglioni B. | Front Microbiol | 10.3389/fmicb.2016.01725 | 2016 | ||
| Multiplex Recombinase Polymerase Amplification Assay for the Simultaneous Detection of Three Foodborne Pathogens in Seafood. | Ma B, Li J, Chen K, Yu X, Sun C, Zhang M. | Foods | 10.3390/foods9030278 | 2020 | ||
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| Enzymology | Coriolus versicolor Mushroom Grown on Selenium-Rich Zeolitic Tuff as a Potential Novel Food Supplement. | Matijasevic D, Pantic M, Stanisavljevic N, Jevtic S, Rajic N, Levic S, Levic S, Nedovic V, Niksic M. | Food Technol Biotechnol | 10.17113/ftb.60.01.22.7172 | 2022 | |
| Survival of an emerging foodborne pathogen: Group B Streptococcus (GBS) serotype III sequence type (ST) 283-under simulated partial cooking and gastric fluid conditions. | Zwe YH, Goh ZHE, Chau ML, Aung KT, Yuk HG. | Food Sci Biotechnol | 10.1007/s10068-018-0525-8 | 2019 | ||
| Xenobiotic Effects of Chlorine Dioxide to Escherichia coli O157:H7 on Non-host Tomato Environment Revealed by Transcriptional Network Modeling: Implications to Adaptation and Selection. | Shu X, Singh M, Karampudi NBR, Bridges DF, Kitazumi A, Wu VCH, De Los Reyes BG. | Front Microbiol | 10.3389/fmicb.2020.01122 | 2020 | ||
| Enzymology | Detection of pathogenic Escherichia coli on potentially contaminated beef carcasses using cassette PCR and conventional PCR. | Manage DP, Lauzon J, Jones CM, Ward PJ, Pilarski LM, Pilarski PM, McMullen LM. | BMC Microbiol | 10.1186/s12866-019-1541-4 | 2019 | |
| Formation and Characterization of Early Bacterial Biofilms on Different Wood Typologies Applied in Dairy Production. | Cruciata M, Gaglio R, Scatassa ML, Sala G, Cardamone C, Palmeri M, Moschetti G, La Mantia T, Settanni L. | Appl Environ Microbiol | 10.1128/aem.02107-17 | 2018 | ||
| Bacteriocin-Based Synergetic Consortia: a Promising Strategy to Enhance Antimicrobial Activity and Broaden the Spectrum of Inhibition. | Soltani S, Biron E, Ben Said L, Subirade M, Fliss I. | Microbiol Spectr | 10.1128/spectrum.00406-21 | 2022 | ||
| Decontamination Effect of the Spindle and 222-Nanometer Krypton-Chlorine Excimer Lamp Combination against Pathogens on Apples (Malus domestica Borkh.) and Bell Peppers (Capsicum annuum L.). | Kang JW, Kang DH. | Appl Environ Microbiol | 10.1128/aem.00006-19 | 2019 | ||
| Terpene constituents of the aerial parts, phenolic content, antibacterial potential, free radical scavenging and antioxidant activity of Callistemon citrinus (Curtis) Skeels (Myrtaceae) from Eastern Cape Province of South Africa. | Larayetan RA, Okoh OO, Sadimenko A, Okoh AI. | BMC Complement Altern Med | 10.1186/s12906-017-1804-2 | 2017 | ||
| Elicitation of Stress-Induced Phenolic Metabolites for Antimicrobial Applications against Foodborne Human Bacterial Pathogens. | Christopher A, Sarkar D, Shetty K. | Antibiotics (Basel) | 10.3390/antibiotics10020109 | 2021 | ||
| Pathogenicity | Bactericidal Effect of Pterostilbene Alone and in Combination with Gentamicin against Human Pathogenic Bacteria. | Lee WX, Basri DF, Ghazali AR. | Molecules | 10.3390/molecules22030463 | 2017 | |
| Metabolism | Isolation and characterization of a Bacillus amyloliquefaciens strain with zearalenone removal ability and its probiotic potential. | Lee A, Cheng KC, Liu JR. | PLoS One | 10.1371/journal.pone.0182220 | 2017 | |
| Effect of the precutting process on sanitizing treatments for reducing pathogens in vegetables. | Hwang JH, Yoon JH, Bae YM, Choi MR, Lee SY, Park KH. | Food Sci Biotechnol | 10.1007/s10068-017-0073-7 | 2017 | ||
| Antimicrobial activities of commercial essential oils and their components against food-borne pathogens and food spoilage bacteria. | Mith H, Dure R, Delcenserie V, Zhiri A, Daube G, Clinquart A. | Food Sci Nutr | 10.1002/fsn3.116 | 2014 | ||
| The Effect of Cantharellus Cibarius Addition on Quality Characteristics of Frankfurter during Refrigerated Storage. | Novakovic S, Djekic I, Klaus A, Vunduk J, Djordjevic V, Tomovic V, Sojic B, Kocic-Tanackov S, Lorenzo JM, Barba FJ, Tomasevic I. | Foods | 10.3390/foods8120635 | 2019 | ||
| Development of Multiplex PCR for Simultaneous Detection of Three Pathogenic Shigella Species. | Ranjbar R, Afshar D, Mehrabi Tavana A, Najafi A, Pourali F, Safiri Z, Sorouri Zanjani R, Jonaidi Jafari N. | Iran J Public Health | 2014 | |||
| UVC LED Irradiation Effectively Inactivates Aerosolized Viruses, Bacteria, and Fungi in a Chamber-Type Air Disinfection System. | Kim DK, Kang DH. | Appl Environ Microbiol | 10.1128/aem.00944-18 | 2018 | ||
| Preparation of Fluorescent Molecularly Imprinted Polymers via Pickering Emulsion Interfaces and the Application for Visual Sensing Analysis of Listeria Monocytogenes. | Zhao X, Cui Y, Wang J, Wang J. | Polymers (Basel) | 10.3390/polym11060984 | 2019 | ||
| Metabolism | Increased Resistance of Salmonella enterica Serovar Typhimurium and Escherichia coli O157:H7 to 222-Nanometer Krypton-Chlorine Excilamp Treatment by Acid Adaptation. | Kang JW, Kang DH. | Appl Environ Microbiol | 10.1128/aem.02221-18 | 2019 | |
| Biogenic production of silver nanoparticles by Enterobacter cloacae Ism26. | El-Baghdady KZ, El-Shatoury EH, Abdullah OM, Khalil MMH. | Turk J Biol | 10.3906/biy-1801-53 | 2018 | ||
| Suppression of Escherichia coli O157:H7 by Dung Beetles (Coleoptera: Scarabaeidae) using the lowbush blueberry agroecosystem as a model system. | Jones MS, Tadepalli S, Bridges DF, Wu VC, Drummond F. | PLoS One | 10.1371/journal.pone.0120904 | 2015 | ||
| Pathogenicity | Tulbaghia violacea and Allium ursinum Extracts Exhibit Anti-Parasitic and Antimicrobial Activities. | Krstin S, Sobeh M, Braun MS, Wink M. | Molecules | 10.3390/molecules23020313 | 2018 | |
| HPLC/ESI-MS and NMR Analysis of Chemical Constitutes in Bioactive Extract from the Root Nodule of Vaccinium emarginatum. | Huang HM, Ho CY, Chang GR, Shia WY, Lai CH, Chao CH, Wang CM. | Pharmaceuticals (Basel) | 10.3390/ph14111098 | 2021 | ||
| Characterization and Genomic Study of the Novel Bacteriophage HY01 Infecting Both Escherichia coli O157:H7 and Shigella flexneri: Potential as a Biocontrol Agent in Food. | Lee H, Ku HJ, Lee DH, Kim YT, Shin H, Ryu S, Lee JH. | PLoS One | 10.1371/journal.pone.0168985 | 2016 | ||
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| Metabolism | Phytic Acid and Sodium Chloride Show Marked Synergistic Bactericidal Effects against Nonadapted and Acid-Adapted Escherichia coli O157:H7 Strains. | Kim NH, Rhee MS. | Appl Environ Microbiol | 10.1128/aem.03307-15 | 2016 | |
| Pathogenicity | In Vitro Antibacterial Activity of Rhodanine Derivatives against Pathogenic Clinical Isolates. | AbdelKhalek A, Ashby CR, Patel BA, Talele TT, Seleem MN. | PLoS One | 10.1371/journal.pone.0164227 | 2016 | |
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| The antimicrobial effect of thiamine dilauryl sulfate in tofu inoculated with Escherichia coli O157:H7, Salmonella Typhimurium, Listeria monocytogenes and Bacillus cereus. | Koo EJ, Kwon KH, Oh SW. | Food Sci Biotechnol | 10.1007/s10068-017-0240-x | 2018 | ||
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| Inactivation of Salmonella Typhimurium by Non-Thermal Plasma Bubbles: Exploring the Key Reactive Species and the Influence of Organic Matter. | Baek KH, Heo YS, Park JY, Kang T, Lee YE, Lim J, Kim SB, Jo C. | Foods | 10.3390/foods9111689 | 2020 | ||
| Genetics | Discovery of Shiga Toxin-Producing Escherichia coli (STEC)-Specific Bacteriophages From Non-fecal Composts Using Genomic Characterization. | Liao YT, Sun X, Quintela IA, Bridges DF, Liu F, Zhang Y, Salvador A, Wu VCH. | Front Microbiol | 10.3389/fmicb.2019.00627 | 2019 | |
| Metabolism | Cecropin A Modulates Tight Junction-Related Protein Expression and Enhances the Barrier Function of Porcine Intestinal Epithelial Cells by Suppressing the MEK/ERK Pathway. | Zhai Z, Ni X, Jin C, Ren W, Li J, Deng J, Deng B, Yin Y. | Int J Mol Sci | 10.3390/ijms19071941 | 2018 | |
| In Vitro Evaluation of Probiotic Properties of Lactic Acid Bacteria Isolated from Some Traditionally Fermented Ethiopian Food Products. | Mulaw G, Sisay Tessema T, Muleta D, Tesfaye A. | Int J Microbiol | 10.1155/2019/7179514 | 2019 | ||
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| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #118348 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103571 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data