Escherichia coli CCUG 52542 is an aerobe bacterium of the family Enterobacteriaceae.
aerobe genome sequence Bacteria| @ref 20215 |
Last LPSN update
2026-02-09 11:37:19 |
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 91.9 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68374 | 29016 ChEBI | arginine | - | hydrolysis | from API ID32E |
| 68374 | 17057 ChEBI | cellobiose | - | builds acid from | from API ID32E |
| 68374 | 18333 ChEBI | D-arabitol | - | builds acid from | from API ID32E |
| 68374 | 18024 ChEBI | D-galacturonic acid | + | builds acid from | from API ID32E |
| 68374 | 17634 ChEBI | D-glucose | + | builds acid from | from API ID32E |
| 68374 | 16899 ChEBI | D-mannitol | + | builds acid from | from API ID32E |
| 68374 | 30849 ChEBI | L-arabinose | + | builds acid from | from API ID32E |
| 68374 | 18403 ChEBI | L-arabitol | - | builds acid from | from API ID32E |
| 68374 | 62345 ChEBI | L-rhamnose | + | builds acid from | from API ID32E |
| 68374 | 25094 ChEBI | lysine | + | degradation | from API ID32E |
| 68374 | 15792 ChEBI | malonate | - | assimilation | from API ID32E |
| 68374 | 17306 ChEBI | maltose | + | builds acid from | from API ID32E |
| 68374 | 17268 ChEBI | myo-inositol | - | builds acid from | from API ID32E |
| 68374 | 18257 ChEBI | ornithine | - | degradation | from API ID32E |
| 68374 | 18394 ChEBI | palatinose | - | builds acid from | from API ID32E |
| 68374 | Potassium 5-ketogluconate | + | builds acid from | from API ID32E | |
| 68374 | 15963 ChEBI | ribitol | - | builds acid from | from API ID32E |
| 68374 | 30911 ChEBI | sorbitol | - | builds acid from | from API ID32E |
| 68374 | 17992 ChEBI | sucrose | - | builds acid from | from API ID32E |
| 68374 | 27082 ChEBI | trehalose | + | builds acid from | from API ID32E |
| 68374 | 27897 ChEBI | tryptophan | - | energy source | from API ID32E |
| 68374 | 16199 ChEBI | urea | - | hydrolysis | from API ID32E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68374 | alpha-galactosidase | + | 3.2.1.22 | from API ID32E |
| 68374 | alpha-glucosidase | - | 3.2.1.20 | from API ID32E |
| 68374 | alpha-maltosidase | - | from API ID32E | |
| 68374 | arginine dihydrolase | - | 3.5.3.6 | from API ID32E |
| 68374 | beta-galactosidase | + | 3.2.1.23 | from API ID32E |
| 68374 | beta-glucosidase | - | 3.2.1.21 | from API ID32E |
| 68374 | beta-glucuronidase | + | 3.2.1.31 | from API ID32E |
| 68374 | L-aspartate arylamidase | - | 3.4.11.21 | from API ID32E |
| 68374 | lipase | - | from API ID32E | |
| 68374 | lysine decarboxylase | + | 4.1.1.18 | from API ID32E |
| 68374 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API ID32E |
| 68374 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32E |
| 68374 | urease | - | 3.5.1.5 | from API ID32E |
| @ref | ODC | ADH (Arg) | LDC (Lys) | URE | LARL | GAT | 5KG | LipaseLIP | Phenol red (Acidification)RP | beta GLU | MAN | MAL | ADO | PLE | beta GUR | MNT | IND | N-Acetyl-beta-Glucosaminidasebeta NAG | beta GAL | GLU | SAC | LARA | DARL | alpha GLU | alpha GAL | TRE | RHA | INO | CEL | SOR | alpha-MaltosidasealphaMAL | L-aspartic acid arylamidaseAspA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59586 | - | - | + | - | - | + | + | - | + | - | + | + | - | - | + | - | - | - | + | + | - | + | - | - | + | + | + | - | - | - | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | 32473_E01 assembly for Escherichia coli NCTC13351 | contig | GCA_900448485   | 562.34169  | 562 | 49.55 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Multiplex antibiotic susceptibility testing of urinary tract infections using an electrochemical lab-on-a-chip. | Crane B, Iles A, Banks CE, Rashid M, Linton PE, Shaw KJ. | Biomed Microdevices | 10.1007/s10544-024-00719-w | 2024 | | |
| Molecular Assessment Using the MASTDISCS® Combi D72C Set for the Phenotypic Detection of Extended-Spectrum Beta-Lactamases, AmpC Beta-Lactamases, and Carbapenemase Enzymes in Escherichia coli and Klebsiella pneumoniae. | Haji SH, Ganjo AR, Abdulaziz SM, Abdullah ZA, Smail SB. | Cureus | 10.7759/cureus.77269 | 2025 | | |
| Prevalence and Antimicrobial Resistance of ESBL E. coli in Early Broiler Production Stage and Farm Environment in Lithuania. | Kasparaviciene B, Novoslavskij A, Aksomaitiene J, Stankeviciene J, Kasetiene N, Sinkevicius R, Malakauskas M. | Microorganisms | 10.3390/microorganisms13020425 | 2025 | | |
| Prevalence, risk factors, and characterisation of extended-spectrum beta-lactamase -producing Enterobacterales (ESBL-E) in horses entering an equine hospital and description of longitudinal excretion. | Eskola K, Aimo-Koivisto E, Heikinheimo A, Mykkanen A, Hautajarvi T, Gronthal T. | BMC Vet Res | 10.1186/s12917-024-04260-z | 2024 | | |
| In Vitro effects of petroleum ether, dichloromethane, methanolic and aqueous leaf extracts of Eucalyptus grandis on selected multidrug-resistant bacteria. | Kwansa-Bentum B, Okine BA, Dayie AD, Tetteh-Quarcoo PB, Kotey FCN, Donkor ES, Dayie NTKD. | PLoS One | 10.1371/journal.pone.0283706 | 2023 | | |
| Plasmid-mediated quinolone resistance genes detected in Ciprofloxacin non-susceptible Escherichia coli and Klebsiella isolated from children under five years at hospital discharge, Kenya. | Kariuki K, Diakhate MM, Musembi S, Tornberg-Belanger SN, Rwigi D, Mutuma T, Mutuku E, Tickell KD, Soge OO, Singa BO, Walson JL, Pavlinac PB, Kariuki S. | BMC Microbiol | 10.1186/s12866-023-02849-2 | 2023 | | |
| Transmission of beta-lactamases in the pork food chain: A public health concern. | Rega M, Andriani L, Poeta A, Casadio C, Diegoli G, Bonardi S, Conter M, Bacci C. | One Health | 10.1016/j.onehlt.2023.100632 | 2023 | | |
| Endophytic Bacteria Enterobacter hormaechei Fabricated Silver Nanoparticles and Their Antimicrobial Activity. | Monowar T, Rahman MS, Bhore SJ, Sathasivam KV. | Pharmaceutics | 10.3390/pharmaceutics13040511 | 2021 | | |
| In vitro activity of omadacycline and levofloxacin against Escherichia coli, Klebsiella pneumoniae and Staphylococcus saprophyticus in human urine supplemented with calcium and magnesium. | Pagano P, Marra A, Shinabarger D, Pillar C. | J Antimicrob Chemother | 10.1093/jac/dkaa138 | 2020 | | |
| Pathogenicity | Silver Nanoparticles Synthesized by Using the Endophytic Bacterium Pantoea ananatis are Promising Antimicrobial Agents against Multidrug Resistant Bacteria. | Monowar T, Rahman MS, Bhore SJ, Raju G, Sathasivam KV. | Molecules | 10.3390/molecules23123220 | 2018 | |
| Characterization of antibiotic resistomes by reprogrammed bacteriophage-enabled functional metagenomics in clinical strains. | Apjok G, Szamel M, Christodoulou C, Seregi V, Vasarhelyi BM, Stirling T, Eszenyi B, Sari T, Vidovics F, Nagrand E, Kovacs D, Szili P, Lantos II, Mehi O, Jangir PK, Herczeg R, Galik B, Urban P, Gyenesei A, Draskovits G, Nyerges A, Fekete G, Bodai L, Zsindely N, Denes B, Yosef I, Qimron U, Papp B, Pal C, Kintses B. | Nat Microbiol | 10.1038/s41564-023-01320-2 | 2023 | | |
| In vitro antimicrobial activity of crude propolis extracts and fractions. | Sa-Eed A, Donkor ES, Arhin RE, Tetteh-Quarcoo PB, Attah SK, Kabotso DEK, Kotey FCN, Dayie NTKD. | FEMS Microbes | 10.1093/femsmc/xtad010 | 2023 | | |
| Silver-doped phosphate coacervates to inhibit pathogenic bacteria associated with wound infections: an in vitro study. | Nikolaou A, Felipe-Sotelo M, Dorey R, Gutierrez-Merino J, Carta D. | Sci Rep | 10.1038/s41598-022-13375-y | 2022 | | |
| Prevalence of ESbetaL, AmpC and Colistin-Resistant E. coli in Meat: A Comparison between Pork and Wild Boar. | Rega M, Carmosino I, Bonilauri P, Frascolla V, Vismarra A, Bacci C. | Microorganisms | 10.3390/microorganisms9020214 | 2021 | | |
| Molecular Detection of Antibiotic-Resistant Genes in Pseudomonas aeruginosa from Nonclinical Environment: Public Health Implications in Mthatha, Eastern Cape Province, South Africa. | Hosu MC, Vasaikar S, Okuthe GE, Apalata T. | Int J Microbiol | 10.1155/2021/8861074 | 2021 | | |
| Enzymology | Antibiotic resistance and virulence patterns of pathogenic Escherichia coli strains associated with acute gastroenteritis among children in Qatar. | Eltai NO, Al Thani AA, Al Hadidi SH, Al Ansari K, Yassine HM. | BMC Microbiol | 10.1186/s12866-020-01732-8 | 2020 | |
| Antimicrobial resistance including Extended Spectrum Beta Lactamases (ESBL) among E. coli isolated from kenyan children at hospital discharge. | Tornberg-Belanger SN, Rwigi D, Mugo M, Kitheka L, Onamu N, Ounga D, Diakhate MM, Atlas HE, Wald A, McClelland RS, Soge OO, Tickell KD, Kariuki S, Singa BO, Walson JL, Pavlinac PB. | PLoS Negl Trop Dis | 10.1371/journal.pntd.0010283 | 2022 | | |
| Detection of extended spectrum beta-lactamase genes in Pseudomonas aeruginosa isolated from patients in rural Eastern Cape Province, South Africa. | Hosu MC, Vasaikar SD, Okuthe GE, Apalata T. | Sci Rep | 10.1038/s41598-021-86570-y | 2021 | | |
| Plasmid Profiling and Occurrence of beta-Lactamase Enzymes in Multidrug-Resistant Uropathogenic Escherichia coli in Kathmandu, Nepal. | Thapa Shrestha U, Shrestha S, Adhikari N, Rijal KR, Shrestha B, Adhikari B, Banjara MR, Ghimire P. | Infect Drug Resist | 10.2147/idr.s250591 | 2020 | | |
| Pathogenicity | Genetic characterization of TEM-type ESBL-associated antibacterial resistance in Enterobacteriaceae in a tertiary hospital in Ghana. | Oduro-Mensah D, Obeng-Nkrumah N, Bonney EY, Oduro-Mensah E, Twum-Danso K, Osei YD, Sackey ST. | Ann Clin Microbiol Antimicrob | 10.1186/s12941-016-0144-2 | 2016 | |
| Occurrence, Phenotypic and Molecular Characterization of Extended-Spectrum- and AmpC- beta-Lactamase Producing Enterobacteriaceae Isolated From Selected Commercial Spinach Supply Chains in South Africa. | Richter L, du Plessis EM, Duvenage S, Korsten L. | Front Microbiol | 10.3389/fmicb.2020.00638 | 2020 | | |
| The molecular characterisation of Escherichia coli K1 isolated from neonatal nasogastric feeding tubes. | Alkeskas A, Ogrodzki P, Saad M, Masood N, Rhoma NR, Moore K, Farbos A, Paszkiewicz K, Forsythe S. | BMC Infect Dis | 10.1186/s12879-015-1210-7 | 2015 | | |
| Pathogenicity | Integrated evolutionary analysis reveals antimicrobial peptides with limited resistance. | Spohn R, Daruka L, Lazar V, Martins A, Vidovics F, Grezal G, Mehi O, Kintses B, Szamel M, Jangir PK, Csorgo B, Gyorkei A, Bodi Z, Farago A, Bodai L, Foldesi I, Kata D, Maroti G, Pap B, Wirth R, Papp B, Pal C. | Nat Commun | 10.1038/s41467-019-12364-6 | 2019 | |
| Harnessing Bacterial Endophytes for Promotion of Plant Growth and Biotechnological Applications: An Overview. | Eid AM, Fouda A, Abdel-Rahman MA, Salem SS, Elsaied A, Oelmuller R, Hijri M, Bhowmik A, Elkelish A, Hassan SE. | Plants (Basel) | 10.3390/plants10050935 | 2021 | | |
| The International Trade of Ware Vegetables and Orna-Mental Plants-An Underestimated Risk of Accelerated Spreading of Phytopathogenic Bacteria in the Era of Globalisation and Ongoing Climatic Changes. | Smoktunowicz M, Jonca J, Stachowska A, May M, Waleron MM, Waleron M, Waleron K. | Pathogens | 10.3390/pathogens11070728 | 2022 | | |
| Pathogenicity | Multidrug-resistant organisms, wounds and topical antimicrobial protection. | Bowler PG, Welsby S, Towers V, Booth R, Hogarth A, Rowlands V, Joseph A, Jones SA. | Int Wound J | 10.1111/j.1742-481x.2012.00991.x | 2012 | |
| Phylogeny | Antibiotic Susceptibility of Cronobacter spp. Isolated from Clinical Samples. | Holy O, Alsonosi A, Hochel I, Roderova M, Zatloukalova S, Mlynarcik P, Kolar M, Petrzelova J, Alazraq A, Chmelar D, Forsythe S. | Pol J Microbiol | 10.21307/pjm-2019-001 | 2019 | |
| Multidrug-resistant Escherichia coli from canine urinary tract infections tend to have commensal phylotypes, lower prevalence of virulence determinants and ampC-replicons. | Wagner S, Gally DL, Argyle SA. | Vet Microbiol | 10.1016/j.vetmic.2014.01.003 | 2014 | | |
| Selenazolinium Salts as "Small Molecule Catalysts" with High Potency against ESKAPE Bacterial Pathogens. | Witek K, Nasim MJ, Bischoff M, Gaupp R, Arsenyan P, Vasiljeva J, Marc MA, Olejarz A, Latacz G, Kiec-Kononowicz K, Handzlik J, Jacob C. | Molecules | 10.3390/molecules22122174 | 2017 | | |
| Antimicrobial susceptibility and molecular epidemiology of extended-spectrum beta-lactamase-producing Enterobacteriaceae from intensive care units at Hamad Medical Corporation, Qatar. | Sid Ahmed MA, Bansal D, Acharya A, Elmi AA, Hamid JM, Sid Ahmed AM, Chandra P, Ibrahim E, Sultan AA, Doiphode S, Bilal NE, Deshmukh A. | Antimicrob Resist Infect Control | 10.1186/s13756-016-0103-x | 2016 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive154143.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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