Escherichia coli K12 C600 CR34 is a mesophilic prokaryote of the family Enterobacteriaceae.
mesophilic
SI-ID 2798
| @ref 20215 |
Last LPSN update
2025-12-16 09:47:49 |
| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 1513 | LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) | Medium recipe at MediaDive  | Name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) Composition: Agar 20.0 g/l NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 1513 | positive | growth | 37 | mesophilic |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | obligate aerobe | 95.2 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 68368 | 28053 ChEBI | melibiose | - | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68368 | 30911 ChEBI | sorbitol | + | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68368 | gelatinase | - | from API 20E | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1513 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | + | + | - | - | - | + | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 1513 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | + | + | - | - | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 1513 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | + | + | - | - | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
Phages| @ref | Name | Strain number | |
|---|---|---|---|
| 124042 | Escherichia phage vB_EcoM-STW1 | DSM 3925 | |
| 124042 | Escherichia phage vB_EcoS-ST W9 | DSM 3925 | |
| 124042 | Escherichia phage vB_Eco-STW12 | DSM 3925 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Single-molecule optical mapping of the distribution of DNA phosphorothioate epigenetics. | Wei Y, Huang Q, Tian X, Zhang M, He J, Chen X, Chen C, Deng Z, Li Z, Chen S, Wang L. | Nucleic Acids Res | 10.1093/nar/gkab169 | 2021 | | |
| Complete Genome Sequence of Bacteriophage EO1, Which Infects Both Escherichia coli O157:H7 and Shigella. | Choi J, Chang Y. | Microbiol Resour Announc | 10.1128/mra.00177-23 | 2023 | | |
| Transcriptome | Novel BRICHOS-Related Antimicrobial Peptides from the Marine Worm Heteromastus filiformis: Transcriptome Mining, Synthesis, Biological Activities, and Therapeutic Potential. | Panteleev PV, Safronova VN, Duan S, Komlev AS, Bolosov IA, Kruglikov RN, Kombarova TI, Korobova OV, Pereskokova ES, Borzilov AI, Dyachenko IA, Shamova OV, Huang Y, Shi Q, Ovchinnikova TV. | Mar Drugs | 10.3390/md21120639 | 2023 | |
| Closed Genome Sequence of Escherichia coli K-12 Group Strain C600. | Allue-Guardia A, Nyong EC, Koenig SSK, Vargas SM, Bono JL, Eppinger M. | Microbiol Resour Announc | 10.1128/mra.01052-18 | 2019 | | |
| A Review on Recent Trends in Bacteriophages for Post-Harvest Food Decontamination. | Braz M, Pereira C, Freire CSR, Almeida A. | Microorganisms | 10.3390/microorganisms13030515 | 2025 | | |
| Conjugative transfer of plasmid p_8N_qac(MN687830.1) carrying qacA gene from Staphylococcus aureus to Escherichia coli C600: potential mechanism for spreading chlorhexidine resistance. | Bes TM, Nagano DS, Marchi AP, Camilo G, Perdigao-Neto LV, Martins RR, Levin AS, Costa SF. | Rev Inst Med Trop Sao Paulo | 10.1590/s1678-9946202163082 | 2021 | | |
| Efficacy of Erwinia amylovora and Xanthomonas campestris pv campestris phages to control fire blight and black rot in vivo. | Vique G, Mendoza-Barbera E, Ramos-Barbero MD, Blanco-Picazo P, Sala-Comorera L, Quiros P, Atares S, Salaet I, Muniesa M, Rodriguez-Rubio L. | Microbiol Spectr | 10.1128/spectrum.00280-25 | 2025 | | |
| Antimicrobial and Antibiofilm Activities of Some Antioxidant 3,4-Dihydroxyphenyl-Thiazole-Coumarin Hybrid Compounds: In Silico and In Vitro Evaluation. | Ungureanu D, Marc G, Duma MN, Tamaian R, Vodnar DC, Tiperciuc B, Moldovan C, Ionut I, Stana A, Oniga O. | Antibiotics (Basel) | 10.3390/antibiotics14090943 | 2025 | | |
| In situ structures of the contractile nanomachine myophage Mu in both its extended and contracted states. | Zhou J, Wang L, Xiao H, Chen W, Liu Z, Song J, Zheng J, Liu H. | J Virol | 10.1128/jvi.02056-24 | 2025 | | |
| Treatment of Clinically Important Bacteria With Cold Atmospheric Plasma. | Ding R, Song J, Huang X, Tan L, Rao X, Yang Y. | Microb Biotechnol | 10.1111/1751-7915.70219 | 2025 | | |
| Efficacy of Surgical/Wound Washes against Bacteria: Effect of Different In Vitro Models. | Parvin F, Vickery K, Deva AK, Hu H. | Materials (Basel) | 10.3390/ma15103630 | 2022 | | |
| Pathogenicity | Pyrrolocin C and equisetin inhibit bacterial acetyl-CoA carboxylase. | Larson EC, Lim AL, Pond CD, Craft M, Cavuzic M, Waldrop GL, Schmidt EW, Barrows LR. | PLoS One | 10.1371/journal.pone.0233485 | 2020 | |
| Plasma Functionalized Carbon Interfaces for Biosensor Application: Toward the Real-Time Detection of Escherichia coli O157:H7. | Gangwar R, Ray D, Rao KT, Khatun S, Subrahmanyam C, Rengan AK, Vanjari SRK. | ACS Omega | 10.1021/acsomega.2c01802 | 2022 | | |
| Pathogenicity | Shipworm symbiosis ecology-guided discovery of an antibiotic that kills colistin-resistant Acinetobacter. | Miller BW, Lim AL, Lin Z, Bailey J, Aoyagi KL, Fisher MA, Barrows LR, Manoil C, Schmidt EW, Haygood MG. | Cell Chem Biol | 10.1016/j.chembiol.2021.05.003 | 2021 | |
| Pathogenicity | Diversity and Local Coadaptation of Escherichia coli and Coliphages From Small Ruminants. | Molina F, Simancas A, Tabla R, Gomez A, Roa I, Rebollo JE. | Front Microbiol | 10.3389/fmicb.2020.564522 | 2020 | |
| Metabolism | Membrane lipid peroxidation in copper alloy-mediated contact killing of Escherichia coli. | Hong R, Kang TY, Michels CA, Gadura N. | Appl Environ Microbiol | 10.1128/aem.07068-11 | 2012 | |
| Plant-Growth Promotion and Biocontrol Properties of Three Streptomyces spp. Isolates to Control Bacterial Rice Pathogens. | Suarez-Moreno ZR, Vinchira-Villarraga DM, Vergara-Morales DI, Castellanos L, Ramos FA, Guarnaccia C, Degrassi G, Venturi V, Moreno-Sarmiento N. | Front Microbiol | 10.3389/fmicb.2019.00290 | 2019 | | |
| Enhanced Photo-Catalytic and Antibacterial Properties of Ni-Doped Cd0.9Zn0.1S Nanostructures. | Jothi S, Ganesh RC, Muthukumaran S, Rathiha SK, Seenivasan RK. | J Inorg Organomet Polym Mater | 10.1007/s10904-021-02120-z | 2022 | | |
| Combining Comprehensive Analysis of Off-Site Lambda Phage Integration with a CRISPR-Based Means of Characterizing Downstream Physiology. | Tanouchi Y, Covert MW. | mBio | 10.1128/mbio.01038-17 | 2017 | | |
| Pathogenicity | A New Pipeline for Designing Phage Cocktails Based on Phage-Bacteria Infection Networks. | Molina F, Simancas A, Ramirez M, Tabla R, Roa I, Rebollo JE. | Front Microbiol | 10.3389/fmicb.2021.564532 | 2021 | |
| Influence of Ni2+ ions on the structural, morphological, photoluminescence, photo-catalytic and anti-bacterial studies of Cd0.9Zn0.1S nanostructures. | Raju P, Jesuraj JP, Muthukumaran S. | J Mater Sci Mater Electron | 10.1007/s10854-021-05994-4 | 2021 | | |
| A Three-Year Follow-Up Study of Antibiotic and Metal Residues, Antibiotic Resistance and Resistance Genes, Focusing on Kshipra-A River Associated with Holy Religious Mass-Bathing in India: Protocol Paper. | Diwan V, Purohit M, Chandran S, Parashar V, Shah H, Mahadik VK, Stalsby Lundborg C, Tamhankar AJ. | Int J Environ Res Public Health | 10.3390/ijerph14060574 | 2017 | | |
| Metabolism | Phage-encoded colanic acid-degrading enzyme permits lytic phage infection of a capsule-forming resistant mutant Escherichia coli strain. | Kim MS, Kim YD, Hong SS, Park K, Ko KS, Myung H. | Appl Environ Microbiol | 10.1128/aem.02606-14 | 2015 | |
| Oligomannose-Rich Membranes of Dying Intestinal Epithelial Cells Promote Host Colonization by Adherent-Invasive E. coli. | Dumych T, Yamakawa N, Sivignon A, Garenaux E, Robakiewicz S, Coddeville B, Bongiovanni A, Bray F, Barnich N, Szunerits S, Slomianny C, Herrmann M, Gouin SG, Lutsyk AD, Munoz LE, Lafont F, Rolando C, Bilyy R, Bouckaert JMJ. | Front Microbiol | 10.3389/fmicb.2018.00742 | 2018 | | |
| Pathogenicity | Tetracycline resistome of the organic pig gut. | Kazimierczak KA, Scott KP, Kelly D, Aminov RI. | Appl Environ Microbiol | 10.1128/aem.02206-08 | 2009 | |
| Metabolism | Evolution of a self-inducible cytolethal distending toxin type V-encoding bacteriophage from Escherichia coli O157:H7 to Shigella sonnei. | Allue-Guardia A, Imamovic L, Muniesa M. | J Virol | 10.1128/jvi.02860-13 | 2013 | |
| Pathogenicity | Role of ceftiofur in selection and dissemination of blaCMY-2-mediated cephalosporin resistance in Salmonella enterica and commensal Escherichia coli isolates from cattle. | Daniels JB, Call DR, Hancock D, Sischo WM, Baker K, Besser TE. | Appl Environ Microbiol | 10.1128/aem.02435-08 | 2009 | |
| Metabolism | Competing pathways control host resistance to virus via tRNA modification and programmed ribosomal frameshifting. | Maynard ND, Macklin DN, Kirkegaard K, Covert MW. | Mol Syst Biol | 10.1038/msb.2011.101 | 2012 | |
| Evidence for a holin-like protein gene fully embedded out of frame in the endolysin gene of Staphylococcus aureus bacteriophage 187. | Loessner MJ, Gaeng S, Scherer S. | J Bacteriol | 10.1128/jb.181.15.4452-4460.1999 | 1999 | | |
| A forward-genetic screen and dynamic analysis of lambda phage host-dependencies reveals an extensive interaction network and a new anti-viral strategy. | Maynard ND, Birch EW, Sanghvi JC, Chen L, Gutschow MV, Covert MW. | PLoS Genet | 10.1371/journal.pgen.1001017 | 2010 | | |
| DNA isolated from Mycobacterium leprae: genome size, base ratio, and homology with other related bacteria as determined by optical DNA-DNA reassociation. | Imaeda T, Kirchheimer WF, Barksdale L. | J Bacteriol | 10.1128/jb.150.1.414-417.1982 | 1982 | | |
| Detailed restriction enzyme map of crown gall-suppressive IncW plasmid pSa, showing ends of deletion causing chloramphenicol sensitivity. | Ireland CR. | J Bacteriol | 10.1128/jb.155.2.722-727.1983 | 1983 | | |
| ICEEc2, a new integrative and conjugative element belonging to the pKLC102/PAGI-2 family, identified in Escherichia coli strain BEN374. | Roche D, Flechard M, Lallier N, Reperant M, Bree A, Pascal G, Schouler C, Germon P. | J Bacteriol | 10.1128/jb.00609-10 | 2010 | | |
| Genetics | Improved bacterial baby machine: application to Escherichia coli K-12. | Helmstetter CE, Eenhuis C, Theisen P, Grimwade J, Leonard AC. | J Bacteriol | 10.1128/jb.174.11.3445-3449.1992 | 1992 | |
| Identification and partial characterization of a novel bipartite protein antigen associated with the outer membrane of Escherichia coli. | Owen P, Caffrey P, Josefsson LG. | J Bacteriol | 10.1128/jb.169.8.3770-3777.1987 | 1987 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive4469.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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