Escherichia coli CCUG 11324 is a bacterium of the family Enterobacteriaceae.
genome sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 90.8 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | 41236_E01 assembly for Escherichia coli NCTC9019 | contig | 562 | 76.98 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 90.80 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 63.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 90.20 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 87.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.75 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.01 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 87.95 | no |
| 125438 | aerobic | aerobicⓘ | no | 68.47 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.50 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 74.35 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Evaluation of Antibacterial Mechanism of Action, Tyrosinase Inhibition, and Photocatalytic Degradation Potential of Sericin-Based Gold Nanoparticles. | Das G, Patra JK. | Int J Mol Sci | 10.3390/ijms24119477 | 2023 | ||
| Silk Biowaste Protein Mediated Silver Nanoparticles Synthesis and Analysis of Anti-Inflammatory, Wound Healing, Antidiabetic, Antioxidant, Tyrosinase Inhibition, and Antibacterial Mechanism of Action. | Das G, Shin HS, Yang IJ, Nguyen LTH, Patra JK. | Int J Nanomedicine | 10.2147/ijn.s512524 | 2025 | ||
| Facile green biosynthesis of silver nanoparticles using Pisum sativum L. outer peel aqueous extract and its antidiabetic, cytotoxicity, antioxidant, and antibacterial activity. | Patra JK, Das G, Shin HS. | Int J Nanomedicine | 10.2147/ijn.s212614 | 2019 | ||
| Photo-mediated optimized synthesis of silver nanoparticles using the extracts of outer shell fibre of Cocos nucifera L. fruit and detection of its antioxidant, cytotoxicity and antibacterial potential. | Das G, Shin HS, Kumar A, Vishnuprasad CN, Patra JK. | Saudi J Biol Sci | 10.1016/j.sjbs.2020.11.022 | 2021 | ||
| Bio-Inspired Synthesis of Gold Nanoparticles Using Leaf Extract of Jamun and Research on Its Biomedical Potential. | Das G, Shin HS, Lim KJ, Patra JK. | Int J Nanomedicine | 10.2147/ijn.s480592 | 2024 | ||
| Synthesis of Biogenic Gold Nanoparticles by Using Sericin Protein from Bombyx mori Silk Cocoon and Investigation of Its Wound Healing, Antioxidant, and Antibacterial Potentials. | Das G, Seo S, Yang IJ, Nguyen LTH, Shin HS, Patra JK. | Int J Nanomedicine | 10.2147/ijn.s378806 | 2023 | ||
| Enzymology | High diversity among environmental Escherichia coli isolates from a bovine feedlot. | Yang HH, Vinopal RT, Grasso D, Smets BF. | Appl Environ Microbiol | 10.1128/aem.70.3.1528-1536.2004 | 2004 | |
| Phylogeny | Novel single-tube agar-based test system for motility enhancement and immunocapture of Escherichia coli O157:H7 by H7 flagellar antigen-specific antibodies. | Murinda SE, Nguyen LT, Ivey SJ, Almeida RA, Oliver SP. | J Clin Microbiol | 10.1128/jcm.40.12.4685-4690.2002 | 2002 | |
| Use of the flagellar H7 gene as a target in multiplex PCR assays and improved specificity in identification of enterohemorrhagic Escherichia coli strains. | Gannon VP, D'Souza S, Graham T, King RK, Rahn K, Read S. | J Clin Microbiol | 10.1128/jcm.35.3.656-662.1997 | 1997 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #45444 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 11324 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive142187.20251217.10
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BacDive in 2025: the core database for prokaryotic strain data