Escherichia coli DSM 19683 is a facultative anaerobe, mesophilic, Gram-negative human pathogen of the family Enterobacteriaceae.
Gram-negative rod-shaped facultative anaerobe mesophilic human pathogen genome sequence| @ref 20215 |
Last LPSN update
2025-12-16 09:52:45 |
| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 20555 | LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) | Medium recipe at MediaDive  | Name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) Composition: Agar 20.0 g/l NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l Distilled water | ||
| 20555 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 35169 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 118695 | CIP Medium 72 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 91 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 118695 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 118695 | 17234 ChEBI | glucose | + | fermentation | |
| 118695 | 17234 ChEBI | glucose | + | degradation | |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 118695 | 17716 ChEBI | lactose | + | fermentation | |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 118695 | 15792 ChEBI | malonate | - | assimilation | |
| 118695 | 29864 ChEBI | mannitol | + | fermentation | |
| 68368 | 28053 ChEBI | melibiose | + | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 118695 | 17632 ChEBI | nitrate | + | reduction | |
| 118695 | 16301 ChEBI | nitrite | + | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 118695 | 132112 ChEBI | sodium thiosulfate | - | builds gas from | |
| 68368 | 30911 ChEBI | sorbitol | + | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 118695 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 118695 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 118695 | beta-galactosidase | + | 3.2.1.23 | |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | + | 3.2.1.31 | from API zym |
| 118695 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 118695 | gelatinase | - | ||
| 68368 | gelatinase | - | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 118695 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 118695 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 118695 | oxidase | - | ||
| 118695 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 118695 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 118695 | urease | - | 3.5.1.5 | |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20555 | + | - | - | - | - | - | - | - | + | - | - | + | + | - | + | + | - | + | - | + | - | not determinedn.d. | + | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | 43188_A01 assembly for Escherichia coli NCTC13167 | contig | GCA_900448075   | 562.34134  | 562 | 77.29 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
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| Production and characterization of exopolysaccharides from Pseudomonas aeruginosa AG01 with some medical potential applications. | Ghanaim AM, Mohamed HI, El-Ansary AE. | Microb Cell Fact | 10.1186/s12934-025-02730-z | 2025 | | |
| Bioconjugation of Serratiopeptidase with Titanium Oxide Nanoparticles: Improving Stability and Antibacterial Properties. | Melchor-Moncada JJ, Vasquez-Giraldo S, Zuluaga-Velez A, Orozco LM, Veloza LA, Sepulveda-Arias JC. | J Funct Biomater | 10.3390/jfb15100300 | 2024 | | |
| Electrochemical point-of-care devices for the diagnosis of sepsis. | Valera E, Kindratenko V, Jankelow AM, Heredia J, Kim AY, Cowell TW, Chen CL, White K, Han HS, Bashir R. | Curr Opin Electrochem | 10.1016/j.coelec.2023.101300 | 2023 | | |
| Variations in active proteases of Blastocystis sp. obtained from water and animal isolates from the Philippines. | Adao DEV, Rivera WL. | J Parasit Dis | 10.1007/s12639-022-01472-8 | 2022 | | |
| mRNA vaccines encoding fusion proteins of monkeypox virus antigens protect mice from vaccinia virus challenge. | Hou F, Zhang Y, Liu X, Murad YM, Xu J, Yu Z, Hua X, Song Y, Ding J, Huang H, Zhao R, Jia W, Yang X. | Nat Commun | 10.1038/s41467-023-41628-5 | 2023 | | |
| Navigating a Fine Balance: Point-Mutant Cheater Viruses Disrupt the Viral Replication Cycle. | Meir M, Kahn A, Farage C, Maoz Y, Harel N, Ben Zvi A, Segev S, Volkov M, Yahud R, Gophna U, Stern A. | Mol Biol Evol | 10.1093/molbev/msae258 | 2025 | | |
| Iodine-Loaded Calcium Titanate for Bone Repair with Sustainable Antibacterial Activity Prepared by Solution and Heat Treatment. | Yamaguchi S, Le PTM, Shintani SA, Takadama H, Ito M, Ferraris S, Spriano S. | Nanomaterials (Basel) | 10.3390/nano11092199 | 2021 | | |
| Diverse roles played by "Pseudomonas fluorescens complex" volatile compounds in their interaction with phytopathogenic microrganims, pests and plants. | Raio A. | World J Microbiol Biotechnol | 10.1007/s11274-023-03873-0 | 2024 | | |
| Pathogenicity | AB569, a non-toxic combination of acidified nitrite and EDTA, is effective at killing the notorious Iraq/Afghanistan combat wound pathogens, multi-drug resistant Acinetobacter baumannii and Acinetobacter spp. | Bogue AL, Panmanee W, McDaniel CT, Mortensen JE, Kamau E, Actis LA, Johannigman JA, Schurr MJ, Satish L, Kotagiri N, Hassett DJ. | PLoS One | 10.1371/journal.pone.0247513 | 2021 | |
| Continuous Adaptive Evolution of a Fast-Growing Corynebacterium glutamicum Strain Independent of Protocatechuate. | Graf M, Haas T, Muller F, Buchmann A, Harm-Bekbenbetova J, Freund A, Niess A, Persicke M, Kalinowski J, Blombach B, Takors R. | Front Microbiol | 10.3389/fmicb.2019.01648 | 2019 | | |
| Microbial Volatile Organic Compounds: An Alternative for Chemical Fertilizers in Sustainable Agriculture Development. | Chandrasekaran M, Paramasivan M, Sahayarayan JJ. | Microorganisms | 10.3390/microorganisms11010042 | 2022 | | |
| Structural insights into the complex of oncogenic KRas4BG12V and Rgl2, a RalA/B activator. | Tariq M, Ikeya T, Togashi N, Fairall L, Kamei S, Mayooramurugan S, Abbott LR, Hasan A, Bueno-Alejo C, Sukegawa S, Romartinez-Alonso B, Muro Campillo MA, Hudson AJ, Ito Y, Schwabe JW, Dominguez C, Tanaka K. | Life Sci Alliance | 10.26508/lsa.202302080 | 2024 | | |
| Genetics | DNA supercoiling in bacteria: state of play and challenges from a viewpoint of physics based modeling. | Junier I, Ghobadpour E, Espeli O, Everaers R. | Front Microbiol | 10.3389/fmicb.2023.1192831 | 2023 | |
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| Novel Pseudomonas sp. SCA7 Promotes Plant Growth in Two Plant Families and Induces Systemic Resistance in Arabidopsis thaliana. | Kuhl-Nagel T, Rodriguez PA, Gantner I, Chowdhury SP, Schwehn P, Rosenkranz M, Weber B, Schnitzler JP, Kublik S, Schloter M, Rothballer M, Falter-Braun P. | Front Microbiol | 10.3389/fmicb.2022.923515 | 2022 | | |
| Pathogenicity | Intra-subtype variation in enteroadhesion accounts for differences in epithelial barrier disruption and is associated with metronidazole resistance in Blastocystis subtype-7. | Wu Z, Mirza H, Tan KS. | PLoS Negl Trop Dis | 10.1371/journal.pntd.0002885 | 2014 | |
| Base-pair resolution analysis of the effect of supercoiling on DNA flexibility and major groove recognition by triplex-forming oligonucleotides. | Pyne ALB, Noy A, Main KHS, Velasco-Berrelleza V, Piperakis MM, Mitchenall LA, Cugliandolo FM, Beton JG, Stevenson CEM, Hoogenboom BW, Bates AD, Maxwell A, Harris SA. | Nat Commun | 10.1038/s41467-021-21243-y | 2021 | | |
| Bacillus volatiles adversely affect the physiology and ultra-structure of Ralstonia solanacearum and induce systemic resistance in tobacco against bacterial wilt. | Tahir HA, Gu Q, Wu H, Niu Y, Huo R, Gao X. | Sci Rep | 10.1038/srep40481 | 2017 | | |
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| Biochemical and genetic characterization of the DNA ligase encoded by Saccharomyces cerevisiae open reading frame YOR005c, a homolog of mammalian DNA ligase IV. | Ramos W, Liu G, Giroux CN, Tomkinson AE. | Nucleic Acids Res | 10.1093/nar/26.24.5676 | 1998 | | |
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How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive23925.20251217.10
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BacDive in 2025: the core database for prokaryotic strain data
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