Escherichia coli (DSM 5698, ATCC 25404, NCIMB 11290)
Escherichia coli K12 is a bacterium of the family Enterobacteriaceae.
BacteriaName and taxonomic classification
| @ref 20215 |
Last LPSN update
2026-05-29 08:25:58 |
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Escherichia |
| Species Escherichia coli |
| Full scientific name Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980) |
| Synonyms (1) |
Culture and growth conditions
Culture medium
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 2291 | LC BROTH MEDIUM (DSMZ Medium 546) | Medium recipe at MediaDive  | Name: LC BROTH MEDIUM (DSMZ Medium 546) Composition: NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l MgSO4 x 7 H2O 1.23238 g/l Glucose 1.0 g/l CaCl2 x 2 H2O 0.735075 g/l Distilled water |
Culture temp
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 2291 | positive | growth | 37 |
Physiology and metabolism
Metabolite utilization
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 68368 | 28053 ChEBI | melibiose | + | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68368 | 30911 ChEBI | sorbitol | + | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
Metabolite production
Metabolite tests
Enzymes
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68368 | gelatinase | - | from API 20E | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
API 20E
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2291 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | + | + | - | + | - | + | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 2291 | + | - | + | - | - | - | - | - | + | - | - | + | + | - | + | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
Interaction and safety
Risk assessment
Phages
| @ref | Name | Strain number | |
|---|---|---|---|
| 124042 | Escherichia phage P1 (Escherichia virus P1) | DSM 5698 |
Literature
Literature 
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Surface modification of magnetic nanoparticles by bacteriophages and ionic liquids precursors. | Dzialak P, Syczewski MD, Blachowski A, Kornaus K, Bajda T, Zych L, Osial M, Borkowski A. | RSC Adv | 10.1039/d2ra06661k | 2023 | | |
| Preliminary Evaluation of the Safety and Probiotic Potential of Akkermansia muciniphila DSM 22959 in Comparison with Lactobacillus rhamnosus GG. | Cozzolino A, Vergalito F, Tremonte P, Iorizzo M, Lombardi SJ, Sorrentino E, Luongo D, Coppola R, Di Marco R, Succi M. | Microorganisms | 10.3390/microorganisms8020189 | 2020 | | |
| Biotechnological Processes Simulating the Natural Fermentation Process of Bee Bread and Therapeutic Properties-An Overview. | Barta DG, Cornea-Cipcigan M, Margaoan R, Vodnar DC. | Front Nutr | 10.3389/fnut.2022.871896 | 2022 | | |
| Acrolein contributes strongly to antimicrobial and heterocyclic amine transformation activities of reuterin. | Engels C, Schwab C, Zhang J, Stevens MJ, Bieri C, Ebert MO, McNeill K, Sturla SJ, Lacroix C. | Sci Rep | 10.1038/srep36246 | 2016 | | |
| Pathogenicity | Inhibitory activity spectrum of reuterin produced by Lactobacillus reuteri against intestinal bacteria. | Cleusix V, Lacroix C, Vollenweider S, Duboux M, Le Blay G. | BMC Microbiol | 10.1186/1471-2180-7-101 | 2007 | |
| Enzymology | Functions of the membrane-associated and cytoplasmic malate dehydrogenases in the citric acid cycle of Escherichia coli. | van der Rest ME, Frank C, Molenaar D. | J Bacteriol | 10.1128/jb.182.24.6892-6899.2000 | 2000 | |
| Blood-Brain Barrier Penetration of Novel 4-Trifluoromethyl-Coumarin Hybrids with Antibacterial Properties as Potential Brain Therapeutics in the Context of Spatially Diverse Healthcare Systems. | Kowalczyk P, Koszelewski D, Misztal T, Szlis M, Mlotkowska P, Golebiewski M, Glowacz K, Kocot M, Marczyk M, Wypych A, Kurylczyk A, Krajewska-Pedzik A, Ostaszewski R. | Int J Mol Sci | 10.3390/ijms26199655 | 2025 | | |
| Synthesis, Antimicrobial Activity, and Tyrosinase Inhibition by Multifunctional 3,4-Dihydroxy-Phenyl Peptidomimetics. | Wavhal DS, Koszelewski D, Kowalczyk P, Brodzka A, Ostaszewski R. | Int J Mol Sci | 10.3390/ijms26041702 | 2025 | | |
| Machine learning aided UV absorbance spectroscopy for microbial contamination in cell therapy products. | Pandi Chelvam S, Ng AJY, Huang J, Lee E, Baranski M, Yong D, Williams RBH, Springs SL, Ram RJ. | Sci Rep | 10.1038/s41598-024-83114-y | 2025 | | |
| Functionalised Mesoporous Silica Thin Films as ROS-Generating Antimicrobial Coatings | Laskowska M, Kowalczyk P, Karczmarska A, Pogoda K, Zubko M, Laskowski L. | Int J Mol Sci | 2025 | | ||
| Nature-Inspired Compounds Targeting Escherichia coli WrbA as Biofilm-Modulating Agents: Computational Design, Synthesis, and Biological Evaluation. | Mori M, Fassi EMA, Villa F, Milano EG, Forlani F, Cappitelli F, Ratti A, Meneghetti F, Roda G, Grazioso G, Villa S. | Arch Pharm (Weinheim) | 10.1002/ardp.70049 | 2025 | | |
| Characterization of Antimicrobial Properties of Copper-Doped Graphitic Nanoplatelets. | Kang JK, Yoon SJ, Park H, Lee SJ, Baek J, Jeon IY, Gwak SJ. | Int J Mol Sci | 10.3390/ijms252212414 | 2024 | | |
| Intestinal epithelial PTPN2 limits pathobiont colonization by immune-directed antimicrobial responses. | Chatterjee P, Spalinger MR, Acevedo C, Santos AN, Gries CM, Manz SM, Canale V, Shawki A, Sayoc-Becerra A, Lei H, Crawford MS, Eckmann L, Borneman J, McCole DF. | Gut Microbes | 10.1080/19490976.2025.2559029 | 2025 | | |
| Rapid, Selective, and Ultra-Sensitive Field Effect Transistor-Based Detection of Escherichia coli. | Zaidan L, Novodchuk I, H Xu A, Nica A, Takaloo S, Lloyd C, Karimi R, Sanderson J, Bajcsy M, Yavuz M. | Materials (Basel) | 10.3390/ma17153648 | 2024 | | |
| Calcium Phosphate (CaP) Composite Nanostructures on Polycaprolactone (PCL): Synergistic Effects on Antibacterial Activity and Osteoblast Behavior. | Ganbaatar SE, Kim HK, Kang NU, Kim EC, U HJ, Cho YS, Park HH. | Polymers (Basel) | 10.3390/polym17020200 | 2025 | | |
| Wound Gel Formulations Containing Poloxamer 407 and Polyhexanide Have In Vitro Antimicrobial and Antibiofilm Activity Against Wound-Associated Microbial Pathogens. | Visvalingam J, Yakandawala N, Regmi S, Adeniji A, Sharma P, Sailer M. | Microorganisms | 10.3390/microorganisms12112362 | 2024 | | |
| In Situ Structures of the Ultra-Long Extended and Contracted Tail of Myoviridae Phage P1. | Yang F, Wang L, Zhou J, Xiao H, Liu H. | Viruses | 10.3390/v15061267 | 2023 | | |
| Evaluation of the mechanistic basis for the antibacterial activity of ursolic acid against Staphylococcus aureus. | Liu G, Qin P, Cheng X, Wu L, Zhao W, Gao W. | Front Microbiol | 10.3389/fmicb.2024.1389242 | 2024 | | |
| Critical analysis of methods to determine growth, control and analysis of biofilms for potential non-submerged antibiofilm surfaces and coatings. | Redfern J, Cunliffe AJ, Goeres DM, Azevedo NF, Verran J. | Biofilm | 10.1016/j.bioflm.2024.100187 | 2024 | | |
| On-Site Fluorescent Detection of Sepsis-Inducing Bacteria using a Graphene-Oxide CRISPR-Cas12a (GO-CRISPR) System. | Kasputis T, He Y, Ci Q, Chen J. | Anal Chem | 10.1021/acs.analchem.3c05459 | 2024 | | |
| Aluminium(III) Oxide-The Silent Killer of Bacteria. | Schabikowski M, Kowalczyk P, Karczmarska A, Gawdzik B, Wypych A, Kramkowski K, Wrzosek K, Laskowski L. | Molecules | 10.3390/molecules28010401 | 2023 | | |
| Ursolic acid: biological functions and application in animal husbandry. | Liu G, Qin P, Cheng X, Wu L, Wang R, Gao W. | Front Vet Sci | 10.3389/fvets.2023.1251248 | 2023 | | |
| Eminent Antimicrobial Peptide Resistance in Zymomonas mobilis: A Novel Advantage of Intrinsically Uncoupled Energetics. | Rutkis R, Lasa Z, Rubina M, Strazdina I, Kalnenieks U. | Antibiotics (Basel) | 10.3390/antibiotics13050451 | 2024 | | |
| Trade-offs, trade-ups, and high mutational parallelism underlie microbial adaptation during extreme cycles of feast and famine. | Behringer MG, Ho WC, Miller SF, Worthan SB, Cen Z, Stikeleather R, Lynch M. | Curr Biol | 10.1016/j.cub.2024.02.040 | 2024 | | |
| Foamed glass ceramics-an upcycled scaffold for microbial biofilm development. | Kugler A, Trivelpiece C, Brigmon RL. | Biotechnol Lett | 10.1007/s10529-022-03332-0 | 2023 | | |
| Actively replicating gut bacteria identified by 5-ethynyl-2'-deoxyuridine (EdU) click chemistry and cell sorting. | Beauchemin ET, Hunter C, Maurice CF. | Gut Microbes | 10.1080/19490976.2023.2180317 | 2023 | | |
| Fabrication of Nanostructured Polycaprolactone (PCL) Film Using a Thermal Imprinting Technique and Assessment of Antibacterial Function for Its Application. | Kim HK, Jang SJ, Cho YS, Park HH. | Polymers (Basel) | 10.3390/polym14245527 | 2022 | | |
| 2D Collagen Membranes from Marine Demosponge Chondrosia reniformis (Nardo, 1847) for Skin-Regenerative Medicine Applications: An In Vitro Evaluation. | Tassara E, Oliveri C, Vezzulli L, Cerrano C, Xiao L, Giovine M, Pozzolini M. | Mar Drugs | 10.3390/md21080428 | 2023 | | |
| The Synthesis and Evaluation of Diethyl Benzylphosphonates as Potential Antimicrobial Agents. | Brodzka A, Kowalczyk P, Trzepizur D, Koszelewski D, Kramkowski K, Szymczak M, Wypych A, Lizut R, Ostaszewski R. | Molecules | 10.3390/molecules27206865 | 2022 | | |
| Application of Bacteriophages on Shiga Toxin-Producing Escherichia coli (STEC) Biofilm. | Mangieri N, Foschino R, Picozzi C. | Antibiotics (Basel) | 10.3390/antibiotics10111423 | 2021 | | |
| Screening and identification of antimicrobial peptides from the gut microbiome of cockroach Blattella germanica. | Chen S, Qi H, Zhu X, Liu T, Fan Y, Su Q, Gong Q, Jia C, Liu T. | Microbiome | 10.1186/s40168-024-01985-9 | 2024 | | |
| Optimization of antimicrobial peptides for the application against biocorrosive bacteria. | Stillger L, Viau L, Kamm L, Holtmann D, Muller D. | Appl Microbiol Biotechnol | 10.1007/s00253-023-12562-9 | 2023 | | |
| Plasma-Induced Graft Polymerization for the In Situ Synthesis of Cross-Linked Nanocoatings. | Kolenovic B, Mafla C, Richards K, Darwish J, Cabinian K, Centeno D, Cattabiani T, Drwiega TJ, Traba C. | ACS Appl Eng Mater | 10.1021/acsaenm.3c00536 | 2024 | | |
| Enzymatic Synthesis of a Novel Coumarin Aminophosphonates: Antibacterial Effects and Oxidative Stress Modulation on Selected E. coli Strains. | Koszelewski D, Kowalczyk P, Brodzka A, Hrunyk A, Kramkowski K, Ostaszewski R. | Int J Mol Sci | 10.3390/ijms24087609 | 2023 | | |
| Metabolism | Generation of an engineered food-grade Lactococcus lactis strain for production of an antimicrobial peptide: in vitro and in silico evaluation. | Tanhaeian A, Mirzaii M, Pirkhezranian Z, Sekhavati MH. | BMC Biotechnol | 10.1186/s12896-020-00612-3 | 2020 | |
| Surface modification of TiO2/ZnO nanoparticles by organic acids with enhanced methylene blue and rhodamine B dye adsorption properties. | Andrade-Guel M, Cabello-Alvarado C, Bartolo-Perez P, Medellin-Banda DI, Avila-Orta CA, Cruz-Ortiz B, Espinosa-Munoz A, Cadenas Pliego G. | RSC Adv | 10.1039/d2ra04961a | 2022 | | |
| Potential Application of Apilactobacillus kunkeei for Human Use: Evaluation of Probiotic and Functional Properties. | Vergalito F, Testa B, Cozzolino A, Letizia F, Succi M, Lombardi SJ, Tremonte P, Pannella G, Di Marco R, Sorrentino E, Coppola R, Iorizzo M. | Foods | 10.3390/foods9111535 | 2020 | | |
| A Novel Biocidal Nanocomposite: Spherical Silica with Silver Ions Anchored at the Surface. | Laskowska M, Kowalczyk P, Karczmarska A, Kramkowski K, Wrzosek K, Laskowski L. | Int J Mol Sci | 10.3390/ijms24010545 | 2022 | | |
| When function is biological: Discerning how silver nanoparticle structure dictates antimicrobial activity. | Zhang Q, Hu Y, Masterson CM, Jang W, Xiao Z, Bohloul A, Garcia-Rojas D, Puppala HL, Bennett G, Colvin VL. | iScience | 10.1016/j.isci.2022.104475 | 2022 | | |
| Potent trifluoromethoxy, trifluoromethylsulfonyl, trifluoromethylthio and pentafluorosulfanyl containing (1,3,4-oxadiazol-2-yl)benzamides against drug-resistant Gram-positive bacteria. | Naclerio GA, Abutaleb NS, Onyedibe KI, Seleem MN, Sintim HO. | RSC Med Chem | 10.1039/c9md00391f | 2020 | | |
| The autoimmune susceptibility gene, PTPN2, restricts expansion of a novel mouse adherent-invasive E. coli. | Shawki A, Ramirez R, Spalinger MR, Ruegger PM, Sayoc-Becerra A, Santos AN, Chatterjee P, Canale V, Mitchell JD, Macbeth JC, Gries CM, Tremblay ML, Hsiao A, Borneman J, McCole DF. | Gut Microbes | 10.1080/19490976.2020.1775538 | 2020 | | |
| Prokaryotic innate immunity through pattern recognition of conserved viral proteins. | Gao LA, Wilkinson ME, Strecker J, Makarova KS, Macrae RK, Koonin EV, Zhang F. | Science | 10.1126/science.abm4096 | 2022 | | |
| Activation of Immune Genes in Leafhoppers by Phytoplasmas and Symbiotic Bacteria. | Gonella E, Mandrioli M, Tedeschi R, Crotti E, Pontini M, Alma A. | Front Physiol | 10.3389/fphys.2019.00795 | 2019 | | |
| Nanotechnology in combating biofilm: A smart and promising therapeutic strategy. | Mohanta YK, Chakrabartty I, Mishra AK, Chopra H, Mahanta S, Avula SK, Patowary K, Ahmed R, Mishra B, Mohanta TK, Saravanan M, Sharma N. | Front Microbiol | 10.3389/fmicb.2022.1028086 | 2022 | | |
| Surface thiolation of silicon for antifouling application. | Zhang X, Gao P, Hollimon V, Brodus D, Johnson A, Hu H. | Chem Cent J | 10.1186/s13065-018-0385-6 | 2018 | | |
| The ratio of nicotinic acid to nicotinamide as a microbial biomarker for assessing cell therapy product sterility. | Huang J, Cui L, Natarajan M, Barone PW, Wolfrum JM, Lee YH, Rice SA, Springs SL. | Mol Ther Methods Clin Dev | 10.1016/j.omtm.2022.04.006 | 2022 | | |
| Pathogenicity | Common Oral Medications Lead to Prophage Induction in Bacterial Isolates from the Human Gut. | Sutcliffe SG, Shamash M, Hynes AP, Maurice CF. | Viruses | 10.3390/v13030455 | 2021 | |
| Metabolism | Isoprene production by Escherichia coli through the exogenous mevalonate pathway with reduced formation of fermentation byproducts. | Kim JH, Wang C, Jang HJ, Cha MS, Park JE, Jo SY, Choi ES, Kim SW. | Microb Cell Fact | 10.1186/s12934-016-0612-6 | 2016 | |
| Motility influences biofilm architecture in Escherichia coli. | Wood TK, Gonzalez Barrios AF, Herzberg M, Lee J. | Appl Microbiol Biotechnol | 10.1007/s00253-005-0263-8 | 2006 | | |
| Enzymology | Polyionic Complexed Antibacterial Heparin-Chitosan Particles for Antibiotic Delivery. | Abri S, Ghatpande AA, Ress J, Barton HA, Leipzig ND. | ACS Appl Bio Mater | 10.1021/acsabm.9b00833 | 2019 | |
| Goethite-titania composite: disinfection mechanism under UV and visible light. | Lara-Rico R, Muzquiz-Ramos EM, Lopez-Badillo CM, Garcia-Perez UM, Cruz-Ortiz BR. | RSC Adv | 10.1039/c8ra08412b | 2019 | | |
| The R1 conjugative plasmid increases Escherichia coli biofilm formation through an envelope stress response. | Yang X, Ma Q, Wood TK. | Appl Environ Microbiol | 10.1128/aem.02809-07 | 2008 | | |
| Pathogenicity | Butenolide, a Marine-Derived Broad-Spectrum Antibiofilm Agent Against Both Gram-Positive and Gram-Negative Pathogenic Bacteria. | Yin Q, Liang J, Zhang W, Zhang L, Hu ZL, Zhang Y, Xu Y. | Mar Biotechnol (NY) | 10.1007/s10126-018-9861-1 | 2019 | |
| Enzymology | Bacteriophages of the Urinary Microbiome. | Miller-Ensminger T, Garretto A, Brenner J, Thomas-White K, Zambom A, Wolfe AJ, Putonti C. | J Bacteriol | 10.1128/jb.00738-17 | 2018 | |
| Phage-delivered CRISPR-Cas9 for strain-specific depletion and genomic deletions in the gut microbiome. | Lam KN, Spanogiannopoulos P, Soto-Perez P, Alexander M, Nalley MJ, Bisanz JE, Nayak RR, Weakley AM, Yu FB, Turnbaugh PJ. | Cell Rep | 10.1016/j.celrep.2021.109930 | 2021 | | |
| Metabolism | Autoinducer 2 controls biofilm formation in Escherichia coli through a novel motility quorum-sensing regulator (MqsR, B3022). | Gonzalez Barrios AF, Zuo R, Hashimoto Y, Yang L, Bentley WE, Wood TK. | J Bacteriol | 10.1128/jb.188.1.305-316.2006 | 2006 | |
| UG/Abi: a highly diverse family of prokaryotic reverse transcriptases associated with defense functions. | Mestre MR, Gao LA, Shah SA, Lopez-Beltran A, Gonzalez-Delgado A, Martinez-Abarca F, Iranzo J, Redrejo-Rodriguez M, Zhang F, Toro N. | Nucleic Acids Res | 10.1093/nar/gkac467 | 2022 | | |
| Pathogenicity | Differential gene expression for investigation of Escherichia coli biofilm inhibition by plant extract ursolic acid. | Ren D, Zuo R, Gonzalez Barrios AF, Bedzyk LA, Eldridge GR, Pasmore ME, Wood TK. | Appl Environ Microbiol | 10.1128/aem.71.7.4022-4034.2005 | 2005 | |
| Brief survey on organometalated antibacterial drugs and metal-based materials with antibacterial activity. | Bieganski P, Szczupak L, Arruebo M, Kowalski K. | RSC Chem Biol | 10.1039/d0cb00218f | 2021 | | |
| Pathogenicity | Hindering the formation and promoting the dispersion of medical biofilms: non-lethal effects of seagrass extracts. | De Vincenti L, Glasenapp Y, Catto C, Villa F, Cappitelli F, Papenbrock J. | BMC Complement Altern Med | 10.1186/s12906-018-2232-7 | 2018 | |
| Removal of Foodborne Pathogen Biofilms by Acidic Electrolyzed Water. | Han Q, Song X, Zhang Z, Fu J, Wang X, Malakar PK, Liu H, Pan Y, Zhao Y. | Front Microbiol | 10.3389/fmicb.2017.00988 | 2017 | | |
| Mechanisms responsible for a PhiX174 mutant's ability to infect Escherichia coli by phosphorylation. | Cox J, Putonti C. | J Virol | 10.1128/jvi.00047-10 | 2010 | | |
| Zinc Polyaleuritate Ionomer Coatings as a Sustainable, Alternative Technology for Bisphenol A-Free Metal Packaging. | Morselli D, Cataldi P, Paul UC, Ceseracciu L, Benitez JJ, Scarpellini A, Guzman-Puyol S, Heredia A, Valentini P, Pompa PP, Marrero-Lopez D, Athanassiou A, Heredia-Guerrero JA. | ACS Sustain Chem Eng | 10.1021/acssuschemeng.1c04815 | 2021 | | |
| Viral recombination systems limit CRISPR-Cas targeting through the generation of escape mutations. | Hossain AA, McGinn J, Meeske AJ, Modell JW, Marraffini LA. | Cell Host Microbe | 10.1016/j.chom.2021.09.001 | 2021 | | |
| Anti-Planktonic and Anti-Biofilm Properties of Pentacyclic Triterpenes-Asiatic Acid and Ursolic Acid as Promising Antibacterial Future Pharmaceuticals. | Sycz Z, Tichaczek-Goska D, Wojnicz D. | Biomolecules | 10.3390/biom12010098 | 2022 | | |
| Pathogenicity | Unravelling the Structural and Molecular Basis Responsible for the Anti-Biofilm Activity of Zosteric Acid. | Catto C, Dell'Orto S, Villa F, Villa S, Gelain A, Vitali A, Marzano V, Baroni S, Forlani F, Cappitelli F. | PLoS One | 10.1371/journal.pone.0131519 | 2015 | |
| One-pot bio-synthesis: N-acetyl-D-neuraminic acid production by a powerful engineered whole-cell catalyst. | Tao F, Zhang Y, Ma C, Xu P. | Sci Rep | 10.1038/srep00142 | 2011 | | |
| Enzymology | Molecular method for detection of total coliforms in drinking water samples. | Maheux AF, Boudreau DK, Bisson MA, Dion-Dupont V, Bouchard S, Nkuranga M, Bergeron MG, Rodriguez MJ. | Appl Environ Microbiol | 10.1128/aem.00546-14 | 2014 | |
| Pathogenicity | Promoting Beneficial and Inhibiting Undesirable Biofilm Formation with Mangrove Extracts. | Glasenapp Y, Catto C, Villa F, Saracchi M, Cappitelli F, Papenbrock J. | Int J Mol Sci | 10.3390/ijms20143549 | 2019 | |
| Jet aeration as alternative to overcome mass transfer limitation of stirred bioreactors. | Weber S, Schaepe S, Freyer S, Kopf MH, Dietzsch C. | Eng Life Sci | 10.1002/elsc.201700169 | 2018 | | |
| Low power gas discharge plasma mediated inactivation and removal of biofilms formed on biomaterials. | Traba C, Chen L, Liang JF. | Curr Appl Phys | 10.1016/j.cap.2012.12.024 | 2013 | | |
| Metabolism | Deregulation of S-adenosylmethionine biosynthesis and regeneration improves methylation in the E. coli de novo vanillin biosynthesis pathway. | Kunjapur AM, Hyun JC, Prather KL. | Microb Cell Fact | 10.1186/s12934-016-0459-x | 2016 | |
| Metabolism | Inorganic polyphosphate essential for lytic growth of phages P1 and fd. | Li L, Rao NN, Kornberg A. | Proc Natl Acad Sci U S A | 10.1073/pnas.0610763104 | 2007 | |
| Nanoparticle Exposure and Hormetic Dose-Responses: An Update. | Iavicoli I, Leso V, Fontana L, Calabrese EJ. | Int J Mol Sci | 10.3390/ijms19030805 | 2018 | | |
| Pathogenicity | Novel carbapenem antibiotics for parenteral and oral applications: in vitro and in vivo activities of 2-aryl carbapenems and their pharmacokinetics in laboratory animals. | Fujimoto K, Takemoto K, Hatano K, Nakai T, Terashita S, Matsumoto M, Eriguchi Y, Eguchi K, Shimizudani T, Sato K, Kanazawa K, Sunagawa M, Ueda Y. | Antimicrob Agents Chemother | 10.1128/aac.01051-12 | 2013 | |
| Controlling bacterial behavior with indole-containing natural products and derivatives. | Melander RJ, Minvielle MJ, Melander C. | Tetrahedron | 10.1016/j.tet.2014.05.089 | 2014 | | |
| Pathogenicity | Inhibition of Escherichia coli biofilm formation by self-assembled monolayers of functional alkanethiols on gold. | Hou S, Burton EA, Simon KA, Blodgett D, Luk YY, Ren D. | Appl Environ Microbiol | 10.1128/aem.02633-06 | 2007 | |
| Pathogenicity | Metal nanoparticles: understanding the mechanisms behind antibacterial activity. | Slavin YN, Asnis J, Hafeli UO, Bach H. | J Nanobiotechnology | 10.1186/s12951-017-0308-z | 2017 | |
| Metabolism | Stationary-phase quorum-sensing signals affect autoinducer-2 and gene expression in Escherichia coli. | Ren D, Bedzyk LA, Ye RW, Thomas SM, Wood TK. | Appl Environ Microbiol | 10.1128/aem.70.4.2038-2043.2004 | 2004 | |
| Chloramphenicol resistance mutation in Escherichia coli which maps in the major ribosomal protein gene cluster. | Baughman GA, Fahnestock SR. | J Bacteriol | 10.1128/jb.137.3.1315-1323.1979 | 1979 | | |
| Metabolism | Indole is an inter-species biofilm signal mediated by SdiA. | Lee J, Jayaraman A, Wood TK. | BMC Microbiol | 10.1186/1471-2180-7-42 | 2007 | |
| Interaction of drug resistance plasmids and bacteriophages with diarrheagenic strains of Escherichia coli. | Bradley DE. | Infect Immun | 10.1128/iai.57.8.2331-2338.1989 | 1989 | | |
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How to cite
If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive4574.20260601.11
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain dataIsabel Schober, Julia Koblitz, Joaquim Sardà Carbasse, Christian Ebeling, Marvin Leon Schmidt, Adam Podstawka, Rohit Gupta, Vinodh Ilangovan, Javad Chamanara, Jörg Overmann, Lorenz Christian Reimer
Nucleic Acids Research; database issue 2025.
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