Name: Bacillus sp. M-5
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 828

Type strain:

Species: Bacillus sp.

Strain Designation: M-5

Culture col. no.: DSM 445, JCM 2518, ATCC 23497, BCRC 12807, DSM 2309, IAM 12319, NCIMB 10275

Strain history: IAM 12319 <-- O. Nakayama M-5.

NCBI tax ID(s): 1409 (species)

SI-ID 265547

ATCC 23497, DSM 445, DSM 2309, NCIB 10275, JCM 2518, CCRC 12807, IAM 12319, NCIMB 10275, KCTC 3486, BCRC 11599, CCRC 11599, BCRC 12807

Special Collections

DSMZ
JCM

Other strains from Bacillus sp.

Section

Bacillus sp. M-5 is a bacterium that produces lactate and was isolated from rhizosphere of wood sorrel.

lactate production
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Bacillus*
	Full Scientific Name (LPSN)	Bacillus Cohn 1872 (Approved Lists 1980)

	Synonym	"Quasibacillus"
	Synonym	"Pseudobacillus"
	Synonym	"Maribacillus"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #210]

Culture medium

BACILLUS "RACEMILACTICUS" MEDIUM (DSMZ Medium 8)

[Ref.: #210]

Culture medium growth

[Ref.: #210]

Culture medium link

Medium recipe at MediaDive

[Ref.: #210]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #210]			growth	30 °C
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #210]

Name of produced compound

DL lactic acid

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #210]	Sample type/isolated from	rhizosphere of wood sorrel

[Ref.: #67770]	Sample type/isolated from	Rhizosphere of wood sorrel (Rumex acetosa)
[Ref.: #67770]	Host species	Rumex acetosa
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence D16279 (>99% sequence identity) for Terrilactibacillus laevilacticus subclade from Microbeatlas

Aquatic Samples	185
Soil Samples	337
Animal Samples	559
Plant Samples	63
Total Samples	1144

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Bacillus racemilacticus gene for 16S rRNA, partial sequence, strain: IAM 12319	D16279	1492	GenBank ENA	33022 tax ID

[Ref.: #67770]

GC-content

37 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #210]

Culture collection no.

DSM 445, JCM 2518, ATCC 23497, BCRC 12807, DSM 2309, IAM 12319, NCIMB 10275

[Ref.: #70502]

SI-ID 265547

References

#210	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 445

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#70502

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID265547.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Bacillus sp. in external resources:
SILVA
BRENDA
PANGAEA
GBIF