Cite this strain

Bacillus sp. (JCM 28839)

Name: Bacillus sp. (JCM 28839)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 163644

Type strain

Culture col. no. JCM 28839

NCBI tax ID(s) 1868422

Special Collections JCM

Links

JCM 28839 is a mesophilic prokaryote that was isolated from Blackish viscous gels and plant roots on the east wall 1 of the Takamatsuzuka Tumulus.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 131444

JCM 28839

@ref 20215

Last LPSN update 2025-12-16 10:09:16

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Bacillus

Full scientific name Bacillus Cohn 1872 (Approved Lists 1980)

Synonyms (4)

Niallia
"Quasibacillus"
Weizmannia
"Maribacillus"

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	28	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Blackish viscous gels and plant roots on the east wall 1 (during relocation of the stone chamber) of the Takamatsuzuka Tumulus	Asuka Village, Nara Pref.	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence LC150677 (>99% sequence identity) for Peribacillus from Microbeatlas

Aquatic Samples	1051
Soil Samples	6241
Animal Samples	2464
Plant Samples	880
Total Samples	10636

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Bacillus sp. JCM 28839 gene for 16S ribosomal RNA, partial sequence, strain: T7611-4-2b	LC150677	1511		1868422

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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