Cite this strain

Bacillus sp. (JCM 19035)

Name: Bacillus sp. (JCM 19035)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162371

Type strain

Culture col. no. JCM 19035

NCBI tax ID(s) 1460653

Special Collections JCM

History JCM <-- T. Kudo F176.

Links

JCM 19035 is a bacterium that was isolated from Sword-tail newt .

genome sequence Bacteria

Name and taxonomic classification

SI-ID 131400

JCM 19035

@ref 20215

Last LPSN update 2026-05-29 08:44:55

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Bacillus

Full scientific name Bacillus Cohn 1872 (Approved Lists 1980)

Synonyms (4)

"Quasibacillus"
Weizmannia
"Maribacillus"
Niallia

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.184

Spore formation

@ref	Spore formation	Confidence
125438		94.483

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
67770	Sword-tail newt (Cynops ensicauda popei)	Cynops ensicauda popei	main island of Okinawa	Japan	JPN	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM131059v1 assembly for Bacillus sp. JCM 19035	contig	GCA_001310595	1460653.3	2728369649	1460653	7.86

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM131059v1 assembly for Bacillus sp. JCM 19035
BV-BRC: 1460653.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	variable	63.41	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.18	no
125439	motility	BacteriaNetⓘ	yes	82.68	no
125439	spore_formation	BacteriaNetⓘ	yes	84.71	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bacillus sp. JCM 19035
PATRIC: 1460653.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	82.63	no
125438	anaerobic	anaerobicⓘ	no	96.48	no
125438	spore-forming	spore-formingⓘ	yes	94.48	no
125438	aerobic	aerobicⓘ	yes	81.07	no
125438	thermophilic	thermophileⓘ	no	92.16	no
125438	flagellated	motile2+ⓘ	yes	83.16	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us