Bacillus sp. (DSM 11173, F8/2-1)

Name: Bacillus sp. (DSM 11173, F8/2-1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 922

Type strain

Strain Designation F8/2-1

Culture col. no. DSM 11173 F8/2-1

NCBI tax ID(s) 83428

Special Collections DSMZ

Links

F8/2-1 is a mesophilic prokaryote that was isolated from peat.

mesophilic genome sequence

Name and taxonomic classification

SI-ID 49042

DSM 11173

@ref 20215

Last LPSN update 2025-12-16 09:46:58

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Bacillus

Full scientific name Bacillus Cohn 1872 (Approved Lists 1980)

Synonyms (4)

Niallia
"Quasibacillus"
Weizmannia
"Maribacillus"

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
4226	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1; with strain-specific modifications) Composition: Soil extract 500.0 g/l Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
4226	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	93.6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Wetland (Swamp)
#Condition	#Acidic	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
4226	peat	Lower-Saxony, Westerbeck, Laffertsche Torfwerke	Germany	DEU	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	ASM1934491v1 assembly for Bacillus sp. FDAARGOS_1420	scaffold	GCA_019344915	2856338.3	2856338	78.02

Genome browser: GCA_019344915

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Bacillus sp. FDAARGOS_1420
PATRIC: 2856338.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	87.10	no
125439	motility	BacteriaNetⓘ	yes	81.80	no
125439	gram_stain	BacteriaNetⓘ	positive	67.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	93.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bacillus sp. FDAARGOS_1420 strain Not applicable
PATRIC: 2856338.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	75.75	no
125438	anaerobic	anaerobicⓘ	no	92.72	no
125438	spore-forming	spore-formingⓘ	yes	87.38	no
125438	aerobic	aerobicⓘ	yes	55.10	no
125438	thermophilic	thermophileⓘ	no	92.83	yes
125438	flagellated	motile2+ⓘ	yes	83.43	no

Literature

References

#4226	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11173
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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