Name: Bacillus sp. JCM 19056
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162389

Type strain:

Species: Bacillus sp.

Culture col. no.: JCM 19056

Strain history: T. Kudo Y14.

NCBI tax ID(s): 1460650 (species)

Special Collections

Other strains from Bacillus sp.

Section

Bacillus sp. JCM 19056 is a spore-forming, Gram-positive bacterium that was isolated from Cultured globefish.

Gram-positive
spore-forming
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Bacillus*
	Full Scientific Name (LPSN)	Bacillus Cohn 1872 (Approved Lists 1980)

	Synonym	"Quasibacillus"
	Synonym	"Pseudobacillus"
	Synonym	"Maribacillus"

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Cultured globefish
[Ref.: #67770]	Geographic location (country and/or sea, region)	Tachibana Bay, Nagasaki
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bacillus sp. JCM 19056	GCA_001310515	contig	GenBank ENA	1460650 tax ID	*
[Ref.: #66792]	Bacillus sp. JCM 19056	1460650.3	wgs	PATRIC	1460650 tax ID	*
[Ref.: #66792]	Bacillus sp. JCM 19056	2728369647	draft	JGI IMG/M	1460650 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Bacillus sp. JCM 19056 PATRIC: 1460650.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacillus sp. JCM 19056 PATRIC: 1460650.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	74.431	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.206	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	78.94	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	69.047	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	92.297	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	73.391	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19056

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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