Name: Bacillus sp. 1NLA3E
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 130179

Type strain:

Species: Bacillus sp.

Strain Designation: 1NLA3E

Culture col. no.: DSM 24511

Strain history: <- S. Green, Oceanography Dept., Florida State Univ., Tallahassee, USA; 1NLA3E <- O. Prakash

NCBI tax ID(s): 1409 (species)

SI-ID 400543

DSM 24511

Special Collections

DSMZ

Other strains from Bacillus sp.

Section

Bacillus sp. 1NLA3E is a spore-forming bacterium that was isolated from contaminated subsurface sediment.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Bacillus*
	Full Scientific Name (LPSN)	Bacillus Cohn 1872 (Approved Lists 1980)

	Synonym	"Quasibacillus"
	Synonym	"Pseudobacillus"
	Synonym	"Maribacillus"

Information on morphological and physiological properties Morphology

[Ref.: #21507]

Incubation period

3-7 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21507]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #21507]

Culture medium growth

[Ref.: #21507]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21507]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21507]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21507]	Sample type/isolated from	contaminated subsurface sediment
[Ref.: #21507]	Geographic location (country and/or sea, region)	TN, Oak Ridge
[Ref.: #21507]	Country	USA
[Ref.: #21507]	Country ISO 3 Code	USA
[Ref.: #21507]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered	#Contamination	-
#Environmental	#Terrestrial	#Geologic
#Environmental	#Terrestrial	#Sediment

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21507]	Bacillus sp. 1NLA3E 16S ribosomal RNA gene, partial sequence	FJ851432	1388	GenBank ENA	666686 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bacillus sp. 1NLA3E	GCA_000242895	complete	GenBank ENA	666686 tax ID	*
[Ref.: #66792]	Bacillus sp. 1NLA3E	666686.3	wgs	PATRIC	666686 tax ID	*
[Ref.: #66792]	Bacillus sp. 1NLA3E	2506520047	complete	JGI IMG/M	666686 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacillus sp. 1NLA3E 1NLA3E NCBI: GCA_000242895.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	68.621	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	85.682	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	53.773	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	89.595	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	84.239	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	75.259	no

Availability in culture collections External links

[Ref.: #21507]

Culture collection no.

DSM 24511

[Ref.: #88730]

SI-ID 400543

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome sequences for three denitrifying bacterial strains isolated from a uranium- and nitrate-contaminated subsurface environment.	Venkatramanan R, Prakash O, Woyke T, Chain P, Goodwin LA, Watson D, Brooks S, Kostka JE, Green SJ	Genome Announc	10.1128/genomeA.00449-13	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21507

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24511

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#88730

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400543.1 )

* These data were automatically processed and therefore are not curated

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Bacillus sp. 1NLA3E 1NLA3E

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