Staphylococcus aureus MD55 is a mesophilic human pathogen of the family Staphylococcaceae.
mesophilic human pathogen genome sequence| @ref 20215 |
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| Domain Bacillati |
| Phylum Bacillota |
| Class Bacilli |
| Order Caryophanales |
| Family Staphylococcaceae |
| Genus Staphylococcus |
| Species Staphylococcus aureus |
| Full scientific name Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980) |
| Synonyms (2) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 17511 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 17511 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 17511 | positive | growth | 37 | mesophilic |
| Test 1 | |
|---|---|
| @ref | 17511 |
| Medium | Mueller-Hinton Agar |
| Manual_annotation | 1 |
| Inhibition zone diameter in mm | |
| Penicillin G | 22 |
| Oxacillin | 32 |
| Ampicillin | 22 |
| Ticarcillin | 24-26 |
| Mezlocillin | 20-22 |
| Cefalotin | 36 |
| Cefazolin | 32 |
| Cefotaxime | 30-32 |
| Aztreonam | 0 |
| Imipenem | 50 |
| Tetracycline | 30-32 |
| Chloramphenicol | 28-30 |
| Gentamycin | 24 |
| Amikacin | 22-24 |
| Vancomycin | 20 |
| Erythromycin | 30 |
| Lincomycin | 30 |
| Ofloxacin | 28 |
| Norfloxacin | 26-28 |
| Colistin | 0 |
| Pipemidic acid | 10 |
| Nitrofurantoin | 22-24 |
| Bacitracin | 20 |
| Polymyxin b | 8 |
| Kanamycin | 24 |
| Neomycin | 20-22 |
| Doxycycline | 30-32 |
| Ceftriaxone | 30 |
| Clindamycin | 36 |
| Fosfomycin | 30 |
| Moxifloxacin | 30-32 |
| Linezolid | 28-30 |
| Nystatin | 0 |
| Quinupristin/dalfopristin | 28 |
| Teicoplanin | 16-18 |
| Piperacillin/tazobactam | 26 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68375 | 22599 ChEBI | arabinose | - | fermentation | from API ID32STA |
| 68375 | 29016 ChEBI | arginine | + | hydrolysis | from API ID32STA |
| 68375 | 17057 ChEBI | cellobiose | - | fermentation | from API ID32STA |
| 68375 | 15824 ChEBI | D-fructose | + | fermentation | from API ID32STA |
| 68375 | 17634 ChEBI | D-glucose | + | fermentation | from API ID32STA |
| 68375 | 16899 ChEBI | D-mannitol | + | fermentation | from API ID32STA |
| 68375 | 16024 ChEBI | D-mannose | + | fermentation | from API ID32STA |
| 68375 | 16988 ChEBI | D-ribose | - | fermentation | from API ID32STA |
| 68375 | 4853 ChEBI | esculin | - | hydrolysis | from API ID32STA |
| 68375 | 17716 ChEBI | lactose | - | fermentation | from API ID32STA |
| 68375 | 17306 ChEBI | maltose | + | fermentation | from API ID32STA |
| 68375 | 59640 ChEBI | N-acetylglucosamine | + | fermentation | from API ID32STA |
| 68375 | 17632 ChEBI | nitrate | + | reduction | from API ID32STA |
| 68375 | 18257 ChEBI | ornithine | - | degradation | from API ID32STA |
| 68375 | 16634 ChEBI | raffinose | - | fermentation | from API ID32STA |
| 68375 | 17992 ChEBI | sucrose | + | fermentation | from API ID32STA |
| 68375 | 27082 ChEBI | trehalose | + | fermentation | from API ID32STA |
| 68375 | 32528 ChEBI | turanose | + | fermentation | from API ID32STA |
| 68375 | 16199 ChEBI | urea | + | hydrolysis | from API ID32STA |
| @ref | ChEBI | Metabolite | Is antibiotic | Is sensitive | Sensitivity conc. | |
|---|---|---|---|---|---|---|
| 68375 | 28368 | novobiocin | 1.8 µg | from API ID32STA |
| @ref | Chebi-ID | Metabolite | Production | |
|---|---|---|---|---|
| 68375 | 15688 ChEBI | acetoin | from API ID32STA |
| @ref | Chebi-ID | Metabolite | Voges-proskauer-test | |
|---|---|---|---|---|
| 68375 | 15688 ChEBI | acetoin | + | from API ID32STA |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68375 | alkaline phosphatase | + | 3.1.3.1 | from API ID32STA |
| 68375 | arginine dihydrolase | + | 3.5.3.6 | from API ID32STA |
| 68375 | beta-galactosidase | - | 3.2.1.23 | from API ID32STA |
| 68375 | beta-glucosidase | - | 3.2.1.21 | from API ID32STA |
| 68375 | beta-glucuronidase | - | 3.2.1.31 | from API ID32STA |
| 17511 | catalase | + | 1.11.1.6 | |
| 17511 | cytochrome-c oxidase | - | 1.9.3.1 | |
| 68375 | L-arginine arylamidase | - | from API ID32STA | |
| 68375 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32STA |
| 68375 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API ID32STA |
| 68375 | urease | + | 3.5.1.5 | from API ID32STA |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | 41255_F01 assembly for Staphylococcus aureus NCTC9393 | contig | 1280 | 77.17 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 88.30 | no |
| 125439 | motility | BacteriaNetⓘ | no | 76.70 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 94.30 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 89.10 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 85.73 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 99.44 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 71.67 | no |
| 125438 | aerobic | aerobicⓘ | yes | 53.10 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.74 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 79.44 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Physico-chemical and biological evaluation of doxycycline loaded into hybrid oxide-polymer layer on Ti-Mo alloy. | Kazek-Kesik A, Nosol A, Plonka J, Smiga-Matuszowicz M, Student S, Brzychczy-Wloch M, Krok-Borkowicz M, Pamula E, Simka W. | Bioact Mater | 10.1016/j.bioactmat.2020.04.009 | 2020 | ||
| Injectable gellan gum-based nanoparticles-loaded system for the local delivery of vancomycin in osteomyelitis treatment. | Posadowska U, Brzychczy-Wloch M, Pamula E. | J Mater Sci Mater Med | 10.1007/s10856-015-5604-2 | 2016 | ||
| Preparation of Terpenoid-Invasomes with Selective Activity against S. aureus and Characterization by Cryo Transmission Electron Microscopy. | Kaltschmidt BP, Ennen I, Greiner JFW, Dietsch R, Patel A, Kaltschmidt B, Kaltschmidt C, Hutten A. | Biomedicines | 10.3390/biomedicines8050105 | 2020 | ||
| PCL and PCL/bioactive glass biomaterials as carriers for biologically active polyphenolic compounds: Comprehensive physicochemical and biological evaluation. | Dziadek M, Dziadek K, Checinska K, Zagrajczuk B, Golda-Cepa M, Brzychczy-Wloch M, Menaszek E, Kopec A, Cholewa-Kowalska K. | Bioact Mater | 10.1016/j.bioactmat.2020.11.025 | 2021 | ||
| Antimicrobial and Fermentation Potential of Himanthalia elongata in Food Applications. | Martelli F, Favari C, Mena P, Guazzetti S, Ricci A, Del Rio D, Lazzi C, Neviani E, Bernini V. | Microorganisms | 10.3390/microorganisms8020248 | 2020 | ||
| Vegetable By-Product Lacto-Fermentation as a New Source of Antimicrobial Compounds. | Ricci A, Bernini V, Maoloni A, Cirlini M, Galaverna G, Neviani E, Lazzi C. | Microorganisms | 10.3390/microorganisms7120607 | 2019 | ||
| Edible Seaweeds and Spirulina Extracts for Food Application: In Vitro and In Situ Evaluation of Antimicrobial Activity towards Foodborne Pathogenic Bacteria. | Martelli F, Cirlini M, Lazzi C, Neviani E, Bernini V. | Foods | 10.3390/foods9101442 | 2020 | ||
| Antimicrobial Activity of Fermented Vegetable Byproduct Extracts for Food Applications. | Ricci A, Bertani G, Maoloni A, Bernini V, Levante A, Neviani E, Lazzi C. | Foods | 10.3390/foods10051092 | 2021 | ||
| Phylogeny | Biotyping of enterotoxigenic Staphylococcus aureus by enterotoxin gene cluster (egc) polymorphism and spa typing analyses. | Blaiotta G, Fusco V, von Eiff C, Villani F, Becker K. | Appl Environ Microbiol | 10.1128/aem.00773-06 | 2006 | |
| Relationships between Staphylococcus aureus genetic background, virulence factors, agr groups (alleles), and human disease. | Jarraud S, Mougel C, Thioulouse J, Lina G, Meugnier H, Forey F, Nesme X, Etienne J, Vandenesch F. | Infect Immun | 10.1128/iai.70.2.631-641.2002 | 2002 | ||
| Enzymology | Chemical and biological characterization of a gonococcal growth inhibitor produced by Staphylococcus haemolyticus isolated from urogenital flora. | Frenette M, Beaudet R, Bisaillon JG, Sylvestre M, Portelance V. | Infect Immun | 10.1128/iai.46.2.340-345.1984 | 1984 | |
| Functionalization of PEO layer formed on Ti-15Mo for biomedical application. | Lesniak K, Plonka J, Smiga-Matuszowicz M, Brzychczy-Wloch M, Kazek-Kesik A | J Biomed Mater Res B Appl Biomater | 10.1002/jbm.b.34504 | 2019 |
| #17511 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24167 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68375 | Automatically annotated from API ID32STA . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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