Staphylococcus aureus CCUG 2354 is a prokaryote of the family Staphylococcaceae.
genome sequence| @ref 20215 |
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|
| Domain Bacillati |
| Phylum Bacillota |
| Class Bacilli |
| Order Caryophanales |
| Family Staphylococcaceae |
| Genus Staphylococcus |
| Species Staphylococcus aureus |
| Full scientific name Staphylococcus aureus Rosenbach 1884 (Approved Lists 1980) |
| Synonyms (2) |
| @ref | Gram stain | Confidence | |
|---|---|---|---|
| 125439 | positive | 94.6 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68375 | 22599 ChEBI | arabinose | - | fermentation | from API ID32STA |
| 68375 | 29016 ChEBI | arginine | + | hydrolysis | from API ID32STA |
| 68375 | 17057 ChEBI | cellobiose | - | fermentation | from API ID32STA |
| 68375 | 15824 ChEBI | D-fructose | + | fermentation | from API ID32STA |
| 68375 | 17634 ChEBI | D-glucose | + | fermentation | from API ID32STA |
| 68375 | 16899 ChEBI | D-mannitol | + | fermentation | from API ID32STA |
| 68375 | 16024 ChEBI | D-mannose | + | fermentation | from API ID32STA |
| 68375 | 16988 ChEBI | D-ribose | - | fermentation | from API ID32STA |
| 68375 | 4853 ChEBI | esculin | - | hydrolysis | from API ID32STA |
| 68375 | 17716 ChEBI | lactose | + | fermentation | from API ID32STA |
| 68375 | 17306 ChEBI | maltose | + | fermentation | from API ID32STA |
| 68375 | 59640 ChEBI | N-acetylglucosamine | + | fermentation | from API ID32STA |
| 68375 | 17632 ChEBI | nitrate | + | reduction | from API ID32STA |
| 68375 | 18257 ChEBI | ornithine | - | degradation | from API ID32STA |
| 68375 | 16634 ChEBI | raffinose | - | fermentation | from API ID32STA |
| 68375 | 17992 ChEBI | sucrose | + | fermentation | from API ID32STA |
| 68375 | 27082 ChEBI | trehalose | + | fermentation | from API ID32STA |
| 68375 | 32528 ChEBI | turanose | + | fermentation | from API ID32STA |
| 68375 | 16199 ChEBI | urea | - | hydrolysis | from API ID32STA |
| @ref | ChEBI | Metabolite | Is sensitive | Sensitivity conc. | |
|---|---|---|---|---|---|
| 68375 | 28368 | novobiocin | 1.8 µg | from API ID32STA |
| @ref | Chebi-ID | Metabolite | Production | |
|---|---|---|---|---|
| 68375 | 15688 ChEBI | acetoin | from API ID32STA |
| @ref | Chebi-ID | Metabolite | Voges-proskauer-test | |
|---|---|---|---|---|
| 68375 | 15688 ChEBI | acetoin | - | from API ID32STA |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68375 | alkaline phosphatase | + | 3.1.3.1 | from API ID32STA |
| 68375 | arginine dihydrolase | + | 3.5.3.6 | from API ID32STA |
| 68375 | beta-galactosidase | + | 3.2.1.23 | from API ID32STA |
| 68375 | beta-glucosidase | - | 3.2.1.21 | from API ID32STA |
| 68375 | beta-glucuronidase | - | 3.2.1.31 | from API ID32STA |
| 68375 | L-arginine arylamidase | - | from API ID32STA | |
| 68375 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32STA |
| 68375 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API ID32STA |
| 68375 | urease | - | 3.5.1.5 | from API ID32STA |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | 41004_H01 assembly for Staphylococcus aureus NCTC7428 | contig | 1280 | 78.44 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 81.60 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 94.60 | no |
| 125439 | motility | BacteriaNetⓘ | no | 74.30 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 79.90 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 85.67 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 99.44 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 72.81 | no |
| 125438 | aerobic | aerobicⓘ | no | 51.59 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.74 | no |
| 125438 | flagellated | motile2+ⓘ | no | 79.89 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Mass Spectrometry-Based Analysis of Surface Proteins in Staphylococcus aureus Clinical Strains: Identification of Promising k-mer Targets for Diagnostics. | Svetlicic E, Alarcon LA, Karlsson R, Jers C, Mijakovic I. | J Proteome Res | 10.1021/acs.jproteome.5c00321 | 2025 | ||
| Synergistic effect of haloduracin and chloramphenicol against clinically important Gram-positive bacteria. | Danesh A, Ljungh A, Mattiasson B, Mamo G. | Biotechnol Rep (Amst) | 10.1016/j.btre.2016.12.008 | 2017 | ||
| Enzymology | Surveillance of methicillin-resistant Staphylococcus aureus in a pediatric hospital in Mexico City during a 7-year period (1997 to 2003): clonal evolution and impact of infection control. | Velazquez-Meza ME, Aires de Sousa M, Echaniz-Aviles G, Solorzano-Santos F, Miranda-Novales G, Silva-Sanchez J, de Lencastre H. | J Clin Microbiol | 10.1128/jcm.42.8.3877-3880.2004 | 2004 | |
| Community-acquired methicillin-resistant Staphylococcus aureus carrying Panton-Valentine leukocidin genes: worldwide emergence. | Vandenesch F, Naimi T, Enright MC, Lina G, Nimmo GR, Heffernan H, Liassine N, Bes M, Greenland T, Reverdy ME, Etienne J. | Emerg Infect Dis | 10.3201/eid0908.030089 | 2003 | ||
| Relationships between Staphylococcus aureus genetic background, virulence factors, agr groups (alleles), and human disease. | Jarraud S, Mougel C, Thioulouse J, Lina G, Meugnier H, Forey F, Nesme X, Etienne J, Vandenesch F. | Infect Immun | 10.1128/iai.70.2.631-641.2002 | 2002 | ||
| Enzymology | First case of type E wound botulism diagnosed using real-time PCR. | Artin I, Bjorkman P, Cronqvist J, Radstrom P, Holst E. | J Clin Microbiol | 10.1128/jcm.01192-07 | 2007 | |
| Virulent combinations of adhesin and toxin genes in natural populations of Staphylococcus aureus. | Peacock SJ, Moore CE, Justice A, Kantzanou M, Story L, Mackie K, O'Neill G, Day NP. | Infect Immun | 10.1128/iai.70.9.4987-4996.2002 | 2002 | ||
| Enzymology | Synthetic oligodeoxyribonucleotide probes for detection of Listeria monocytogenes. | Datta AR, Wentz BA, Shook D, Trucksess MW. | Appl Environ Microbiol | 10.1128/aem.54.12.2933-2937.1988 | 1988 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #44527 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 2354 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68375 | Automatically annotated from API ID32STA . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive141494.20251217.10
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BacDive in 2025: the core database for prokaryotic strain data