Pseudomonas putida (DSM 28064, B6-2)

Cell morphology

Multimedia

• @ref:	20320
  multimedia content:	DSM_28064.jpg
  multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_28064.jpg
  intellectual property rights:	© Leibniz-Institut DSMZ
  manual_annotation:	1

Culture medium

@ref	Name	Growth	Medium link	Composition
20320	MINERAL MEDIUM (BRUNNER) (DSMZ Medium 457)		Medium recipe at MediaDive	Name: MINERAL MEDIUM (BRUNNER) (DSMZ Medium 457) Composition: Na2HPO4 2.44 g/l KH2PO4 1.52 g/l (NH4)2SO4 0.5 g/l MgSO4 x 7 H2O 0.2 g/l CaCl2 x 2 H2O 0.05 g/l EDTA 0.005 g/l FeSO4 x 7 H2O 0.002 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l MnCl2 x 4 H2O 3e-05 g/l Na2MoO4 x 2 H2O 3e-05 g/l NiCl2 x 6 H2O 2e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Distilled water
20320	REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)		Medium recipe at MediaDive	Name: REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

Oxygen tolerance

Spore formation

Isolation source categories

Isolation

Taxonmaps

69479

Global distribution of 16S sequence EF672104 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	543
Soil Samples	368
Animal Samples	799
Plant Samples	423
Total Samples	2133

Risk assessment

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM22603v3 assembly for Pseudomonas putida B6-2	complete	GCA_000226035	1081940.5	3007246537	1081940	98.23
66792	Pseudomonas putida B6-2	complete			2548876715	1081940	87.72

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20320	Pseudomonas sp. B6-2 16S ribosomal RNA gene, partial sequence	EF672104	1402		453577

Predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Genetic mapping of highly versatile and solvent-tolerant Pseudomonas putida B6-2 (ATCC BAA-2545) as a 'superstar' for mineralization of PAHs and dioxin-like compounds.	Wang W, Li Q, Zhang L, Cui J, Yu H, Wang X, Ouyang X, Tao F, Xu P, Tang H	Environ Microbiol	10.1111/1462-2920.15613	2021
Metabolism	Unique regulator SrpR mediates crosstalk between efflux pumps TtgABC and SrpABC in Pseudomonas putida B6-2 (DSM 28064).	Yao X, Tao F, Tang H, Hu H, Wang W, Xu P	Mol Microbiol	10.1111/mmi.14605	2020
Metabolism	Multiple Roles for Two Efflux Pumps in the Polycyclic Aromatic Hydrocarbon-Degrading Pseudomonas putida Strain B6-2 (DSM 28064).	Yao X, Tao F, Zhang K, Tang H, Xu P	Appl Environ Microbiol	10.1128/AEM.01882-17	2017
Genetics	Genome sequence of Pseudomonas putida strain B6-2, a superdegrader of polycyclic aromatic hydrocarbons and dioxin-like compounds.	Tang H, Yu H, Li Q, Wang X, Gai Z, Yin G, Su F, Tao F, Ma C, Xu P	J Bacteriol	10.1128/JB.06201-11	2011
Metabolism	New metabolites in dibenzofuran cometabolic degradation by a biphenyl-cultivated Pseudomonas putida strain B6-2.	Li Q, Wang X, Yin G, Gai Z, Tang H, Ma C, Deng Z, Xu P	Environ Sci Technol	10.1021/es901991d	2009