Name: Bacillus subtilis DSM 21393
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 979

Type strain:

Species: Bacillus subtilis

Culture col. no.: DSM 21393

Strain history: <- J. Glazyrina, Technische Universität Berlin

NCBI tax ID(s): 1423 (species)

SI-ID 405784

DSM 21393

Special Collections

DSMZ

Other strains from Bacillus subtilis

Section

Bacillus subtilis DSM 21393 is a spore-forming, Gram-positive human pathogen that was isolated from Potato tubers.

Gram-positive
spore-forming
human pathogen
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Bacillus*
	Species	**Bacillus subtilis**
	Full Scientific Name (LPSN)	Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

Synonym

"Vibrio subtilis"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15672]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #15672]

Culture medium growth

[Ref.: #15672]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15672]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #15672]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

yes Confidence in %95.429

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15672]	Sample type/isolated from	Potato tubers
[Ref.: #15672]	Geographic location (country and/or sea, region)	Tatarstan
[Ref.: #15672]	Country	Russia
[Ref.: #15672]	Country ISO 3 Code	RUS
[Ref.: #15672]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15672]	Pathogenicity (human)	yes, in single cases
[Ref.: #15672]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bacillus subtilis DSM 21393	GCA_029537095	complete	GenBank ENA	1423 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacillus subtilis DSM 21393 NCBI: GCA_029537095.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	84.481	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	87.953	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	72.268	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	95.429	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	95.174	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	88.277	no

Availability in culture collections External links

[Ref.: #15672]

Culture collection no.

DSM 21393

[Ref.: #70652]

SI-ID 405784

References

#15672

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21393

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#70652

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405784.1 )

* These data were automatically processed and therefore are not curated

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