Bacillus subtilis DSM 1970 is a mesophilic prokaryote that was isolated from soybeans.
mesophilic genome sequence| @ref 20215 |
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| Domain Bacillati |
| Phylum Bacillota |
| Class Bacilli |
| Order Caryophanales |
| Family Bacillaceae |
| Genus Bacillus |
| Species Bacillus subtilis |
| Full scientific name Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 928 | NUTRIENT AGAR (DSMZ Medium 1) | Medium recipe at MediaDive | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 928 | positive | growth | 30 | mesophilic |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Plants | #Herbaceous plants (Grass,Crops) | |
| #Host Body-Site | #Plant | #Fruit (Seed) |
| 928 | Sample typesoybeans |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM298217v1 assembly for Bacillus subtilis ATCC 21228 | complete | 1423 | 98.01 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 52.40 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 57.30 | no |
| 125439 | gram_stain | BacteriaNetⓘ | variable | 81.20 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative aerobe | 59.90 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 82.51 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 89.41 | no |
| 125438 | aerobic | aerobicⓘ | yes | 73.18 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 92.32 | no |
| 125438 | thermophilic | thermophileⓘ | no | 95.76 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 86.78 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Morphological Study of Bio-Based Polymers in the Consolidation of Waterlogged Wooden Objects. | Walsh-Korb Z, Stelzner I, Dos Santos Gabriel J, Eggert G, Averous L. | Materials (Basel) | 10.3390/ma15020681 | 2022 | ||
| Metabolism | Genetic Background Behind the Amino Acid Profiles of Fermented Soybeans Produced by Four Bacillus spp. | Jang M, Jeong DW, Heo G, Kong H, Kim CT, Lee JH. | J Microbiol Biotechnol | 10.4014/jmb.2012.12051 | 2021 | |
| Genetics | Complete Nucleotide Sequence Analysis of a Novel Bacillus subtilis-Infecting Bacteriophage BSP10 and Its Effect on Poly-Gamma-Glutamic Acid Degradation. | Ghosh K, Senevirathne A, Kang HS, Hyun WB, Kim JE, Kim KP. | Viruses | 10.3390/v10050240 | 2018 | |
| pLS20 is the archetype of a new family of conjugative plasmids harboured by Bacillus species. | Val-Calvo J, Miguel-Arribas A, Abia D, Wu LJ, Meijer WJJ. | NAR Genom Bioinform | 10.1093/nargab/lqab096 | 2021 | ||
| Bacillus spp. Isolated from Puba as a Source of Biosurfactants and Antimicrobial Lipopeptides. | Perez KJ, Viana JD, Lopes FC, Pereira JQ, Dos Santos DM, Oliveira JS, Velho RV, Crispim SM, Nicoli JR, Brandelli A, Nardi RM. | Front Microbiol | 10.3389/fmicb.2017.00061 | 2017 | ||
| Current Perspectives on the Physiological Activities of Fermented Soybean-Derived Cheonggukjang. | Kim IS, Hwang CW, Yang WS, Kim CH. | Int J Mol Sci | 10.3390/ijms22115746 | 2021 | ||
| Enzymology | Bioassay- and metabolomics-guided screening of bioactive soil actinomycetes from the ancient city of Ihnasia, Egypt. | Sebak M, Saafan AE, AbdelGhani S, Bakeer W, El-Gendy AO, Espriu LC, Duncan K, Edrada-Ebel R. | PLoS One | 10.1371/journal.pone.0226959 | 2019 |
| #928 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1970 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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