Bacillus subtilis (DSM 10, ATCC 6051, CCM 2216)

Name: Bacillus subtilis (DSM 10, ATCC 6051, CCM 2216)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1172

Type strain

Strain Designation Marburg, 744

Culture col. no. DSM 10 ATCC 6051 CCM 2216 IAM 12118 IFO 13719 26 more

NCBI tax ID(s) 1423 135461

Special Collections DSMZ CCUG JCM KCTC CIP UCCCB

History <- ATCC <- H.J. Conn, strain Marburg IAM 12118 <-- ATCC 6051 <-- H. J. Conn strain Marburg. ATCC <- H.J. Conn, strain Marburg CIP <- 1952, R.E. Gordon, New Jersey Agri. Exper. Stat., New Brunswick, USA: strain 744 <- ATCC <- H.J. Conn: strain Marburg

Links

Bacillus subtilis Marburg is a facultative anaerobe, spore-forming, Gram-positive bacterium that produces antibiotic compounds.

antibiotic compound production spore-forming Gram-positive motile rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 34732

LMG 7135,ATCC 6051,CCM 2216,CECT 39,DSM 10,IAM 12118,IFO 12210,JCM 1465,NCFB 1769,NCIMB 3610,NCTC 3610,IFO 13719,NCIB 3610,IMET 10758,NCDO 1769,CCRC 10255,NCAIM B.01095,IFO 16412,VKM B-501,CIP 5265,LMD 32.9,LMD 53.16,LMD 70.64,NRRL NRS-1315,VTT E-70009,CECT 497,NRRL NRS-744,KCTC 3135,KCTC 3555,NBRC 13719,NBRC 16412,NRRL B-4219,NCCB 32009,NCCB 53016,NCCB 70064,NBRC 12210,BCRC 10255,CFBP 4228,CCT 0516,CCT 0480,CCT 1940,CCT 2471,CCT 2576,CCT 3131,IMET 10,ICMP 12486,NBIMCC 1710,NBIMCC 2353,NCIMB 30161,NCIM 2920,CDBB 916,CDBB 39,ACM 40,VKM B-758,CNCTC 5615,CGMCC 1.3358,VTT E-97009,CIP 52.65,CCUG 163 B

@ref 20215

Last LPSN update 2026-02-09 11:18:02

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Bacillus

Species Bacillus subtilis

Full scientific name Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

Synonyms (1)

"Vibrio subtilis"

BacDive ID	Other strains from **Bacillus subtilis** (270)	Type strain
962	B. subtilis DSM 1088, IFO 13169, NBRC 13169, OUT 8353
963	B. subtilis RCTI 140, DSM 1089, IFO 3026, NBRC 3026, ...
964	B. subtilis DSM 1092, IFO 3009, NBRC 3009, OUT 8235
965	B. subtilis DSM 1970, ATCC 21228, SC 8584 (SO-4)
966	B. subtilis 4-3 Ky, DSM 1971, ATCC 21394
967	B. subtilis DSM 2109, ATCC 11774, NCTC 8236, CCUG 50054, ...
969	B. subtilis SA 22, DSM 4181, NCA 72-52
970	B. subtilis natto 3335 UM4, 3335 UM4, pLS20, DSM 4449
971	B. subtilis natto 3335 UM8, pLS20, 3335 UM8, DSM 4450, ...
972	B. subtilis DSM 4451
973	B. subtilis DB163, pGR71, DSM 4515
974	B. subtilis pMW1, DSM 4608, BR 157
975	B. subtilis DSM 5552, NRS 254
976	B. subtilis DSM 5611, NRRL B-360, NRS 230
977	B. subtilis SB 491, DSM 6397, BGSC 1A2
978	B. subtilis DSM 13019, SSI MK1
979	B. subtilis DSM 21393
980	B. subtilis ES2-W11c1, DSM 30651
981	B. subtilis ES2-W11c2, DSM 30652
982	B. subtilis ES1-131, DSM 30512
983	B. subtilis ES1-179-1, DSM 30529
984	B. subtilis ES1-181-2, DSM 30533
985	B. subtilis ES1-182-1, DSM 30534
986	B. subtilis ES1-188-2, DSM 30540
987	B. subtilis ES1-188-3, DSM 30541
988	B. subtilis ES1-227, DSM 30551
989	B. subtilis ES1-257-2, DSM 30558
990	B. subtilis ES1-272, DSM 30562
991	B. subtilis ES1-306a, DSM 30570
992	B. subtilis ES1-311-1, DSM 30581
993	B. subtilis ES2-8b1, DSM 30597
994	B. subtilis FR2-W7Bb, DSM 30711
995	B. subtilis ES2-W7c1, DSM 30642
996	B. subtilis FR2-S1Ab, DSM 30671
997	B. subtilis FR2-S6Ba, DSM 30676
998	B. subtilis FR2-S7Aa, DSM 30677
999	B. subtilis FR2-S11Ca, DSM 30682
1000	B. subtilis FR1-49con, DSM 30723
1001	B. subtilis TW17/1, DSM 30801
1002	B. subtilis 1E9(pBC16), DSM 23521
1003	B. subtilis strain 168, DSM 23778
1004	B. subtilis YB886, DSM 25152
1156	B. subtilis 168, DSM 402, NBRC 111470, NCIB 10106, JCM ...
1157	B. subtilis S 237, DSM 1090, OUT 8424
1158	B. subtilis S 239, DSM 1091, OUT 8425
1159	B. subtilis DSM 3256, IAM 1213
1160	B. subtilis DSM 3257, IAM 1259, JCM 20132
1170	B. subtilis DSM 5213, BGSC 1A40, BR 151
1171	B. subtilis BD 393, DSM 5214, BGSC 1A511
1173	B. subtilis CU 1050, DSM 5545, BGSC 1A459/SU+III, HER ...
1174	B. subtilis DSM 5660, NRRL B-362, NRS 624
1175	B. subtilis 110NA, DSM 5547, HER 1243
1176	B. subtilis DSM 6198, ATCC 39090, BGSC 1S53
1177	B. subtilis RUB 331, DSM 6223, ATCC 31578
1179	B. subtilis NP40, 1A309, DSM 6887, BGSC 1A309
1180	B. subtilis 1A658, DA 65, DSM 6889, BGSC 1A658
1186	B. subtilis DSM 9565, ATCC 33677, BR 151
130881	B. subtilis T3_6, DSM 31033
130880	B. subtilis D13-1, DSM 100614
130877	B. subtilis FS3-1, DSM 100605
130878	B. subtilis D6-1, DSM 100612
130879	B. subtilis D8-1, DSM 100613
130876	B. subtilis Amp-T18, DSM 28592
22915	B. subtilis P5/4_1, DSM 30924
22916	B. subtilis P8/5_1, DSM 30927
22917	B. subtilis P8/15_1, DSM 30928
22918	B. subtilis P10/7_1, DSM 30929
22919	B. subtilis P10/14_1, DSM 30925
23667	B. subtilis D1, DSM 30941
23668	B. subtilis D-FC1, DSM 30942
130185	B. subtilis G20, DSM 31020
130186	B. subtilis G23, DSM 31021
130187	B. subtilis b9_4, DSM 31008
130188	B. subtilis b9_5, DSM 31009
130189	B. subtilis b9_6, DSM 31010
131652	B. subtilis Stev2, DSM 103044
131653	B. subtilis Stev9, DSM 103047
131654	B. subtilis Stev18, DSM 103051
131655	B. subtilis D36_1, DSM 103758
134612	B. subtilis PM 15, CIP 76.53
134701	B. subtilis AA 56, CIP 76.87
134853	B. subtilis FS 437, CIP 76.34
134854	B. subtilis PM 43, CIP 76.63
134856	B. subtilis FS 32, CIP 76.81
134857	B. subtilis AA 77, CIP 76.91
134858	B. subtilis AA 79, CIP 76.92
134859	B. subtilis AA 92, CIP 76.93
135155	B. subtilis FA 10, CIP 76.72
135173	B. subtilis FF 25, CIP 76.80
135255	B. subtilis CIP 51.55
135269	B. subtilis FD 10, CIP 76.29
135270	B. subtilis FE 9, CIP 76.30
135280	B. subtilis CIP 61.6, ATCC 4529, NRRL NRS-1004, NRRL: ...
135297	B. subtilis PM 16, CIP 76.54
135365	B. subtilis NRS-230, CIP 52.66
135516	B. subtilis 1576, CIP 51.15
135545	B. subtilis CIP 51.51
135547	B. subtilis PM 14, CIP 76.52
135577	B. subtilis PM 44, CIP 76.64
135581	B. subtilis PM 26, CIP 76.56
135590	B. subtilis PM 32, CIP 76.57
135620	B. subtilis 5a, CIP 61.7, NCTC 2590
135643	B. subtilis PM 36, CIP 76.58
135676	B. subtilis PM 39, CIP 76.60
135695	B. subtilis AB 93-8-1, CIP 76.44
135696	B. subtilis AB 53, CIP 76.103
135697	B. subtilis AB 72, CIP 76.104
135698	B. subtilis AB 73, CIP 76.105
135699	B. subtilis AD 8, CIP 76.106
135700	B. subtilis AD 19, CIP 76.107
135701	B. subtilis AA 48, CIP 76.108
135783	B. subtilis PM 42, CIP 76.62
135784	B. subtilis EV 15, CIP 76.70
135900	B. subtilis CIP 104473, ATCC 19659, IFO 13722, PRD 66
135909	B. subtilis 3R9675, CIP 54.10, ATCC 9524
136058	B. subtilis CIP A33
136375	B. subtilis B-558, CIP 53.159, ATCC 9466, IAM 1026, NCDO ...
136391	B. subtilis CIP 53.173, NCTC 2121
136392	B. subtilis CIP 53.174, ATCC 8190, NCTC 2118
136394	B. subtilis CIP 53.176, NCTC 2116
136395	B. subtilis CIP 53.178, NCTC 2123
136501	B. subtilis 168 CA, CIP 106309
136948	B. subtilis AA 4, CIP 76.83
136959	B. subtilis AA 16, CIP 76.85
136969	B. subtilis AA 5, CIP 76.84
136972	B. subtilis AA 51, CIP 76.86
136975	B. subtilis AA 57, CIP 76.88
136991	B. subtilis AA 62, CIP 76.89
136992	B. subtilis AA 64, CIP 76.90
137036	B. subtilis B2, CIP 55.96
137087	B. subtilis FE 6, CIP 76.75
137100	B. subtilis PM 25, CIP 76.55
137129	B. subtilis AA 2, CIP 76.82
137272	B. subtilis 796, CIP 104611, ATCC 82, ATCC 8037
137292	B. subtilis CIP 53.179, ATCC 8188, NCTC 2122
137348	B. subtilis FS 381, CIP 76.32
137349	B. subtilis FS 436, CIP 76.33
137416	B. subtilis PM 13, CIP 76.51
137419	B. subtilis AC 27, CIP 76.96
137433	B. subtilis AC 28, CIP 76.97
137537	B. subtilis CIP A4
137923	B. subtilis 99-86, CIP 102199
138447	B. subtilis CIP 51.48
138480	B. subtilis CIP 51.54
138711	B. subtilis PM 37, CIP 76.48
138730	B. subtilis PM 40, CIP 76.49
138739	B. subtilis PM 7, CIP 76.50
138763	B. subtilis AC 32, CIP 76.99
138773	B. subtilis AC 33, CIP 76.100
138777	B. subtilis AC 34, CIP 76.101
138779	B. subtilis AC 35, CIP 76.102
138875	B. subtilis FE 19, CIP 76.79
138909	B. subtilis Caron, CIP A155
138915	B. subtilis PM 38, CIP 76.59
138956	B. subtilis AB 12, CIP 76.35
138957	B. subtilis 168, CIP 76.45
138958	B. subtilis PM 6, CIP 76.46
138959	B. subtilis CB 22, CIP 76.26
138964	B. subtilis DB 16, CIP 76.27
138965	B. subtilis FA 10, CIP 76.28
138967	B. subtilis FS 336, CIP 76.31
138968	B. subtilis FS 223, CIP 76.38
138970	B. subtilis FS 319, CIP 76.36
138971	B. subtilis AB 35, CIP 76.37
138972	B. subtilis FS 382, CIP 76.39
138973	B. subtilis AB 34, CIP 76.40
138974	B. subtilis AA 32, CIP 76.41
138975	B. subtilis AB 91-2-2, CIP 76.43
138976	B. subtilis PM 9, CIP 76.47
138979	B. subtilis PM 41, CIP 76.61
138980	B. subtilis PM 47, CIP 76.65
138981	B. subtilis PM 49, CIP 76.66
138982	B. subtilis SB 5-2, CIP 76.67
138983	B. subtilis BD 68, CIP 76.68
138984	B. subtilis EC 21, CIP 76.69
138985	B. subtilis EV 16, CIP 76.71
138986	B. subtilis FA 20-1, CIP 76.73
138987	B. subtilis FC 10, CIP 76.74
138988	B. subtilis FE 10, CIP 76.76
138989	B. subtilis FE 20, CIP 76.77
138990	B. subtilis FF 15, CIP 76.78
138992	B. subtilis AA 94, CIP 76.94
138993	B. subtilis AB 8, CIP 76.95
138994	B. subtilis AC 31, CIP 76.98
138995	B. subtilis AB 34-1, CIP 76.42
139174	B. subtilis 543, CIP 51.49
139209	B. subtilis CIP 102517
139407	B. subtilis CIP 53.175, NCTC 2119
139411	B. subtilis CIP 53.177, NCTC 2117
139520	B. subtilis Parry1, CIP 110271, NCIMB 13061, NCTC 5398, ...
139538	B. subtilis RS2008, CIP 109935
139539	B. subtilis CIP 63.8
141283	B. subtilis CCUG 625
141686	B. subtilis CCUG 4783
142101	B. subtilis CCUG 10780, ATCC 12432, NCTC 10315, ATCC ...
142397	B. subtilis CCUG 12316
145153	B. subtilis CCUG 27765, NRRL NRS-356, NRRL NRS-238, NRRL ...
146436	B. subtilis CCUG 31131
146685	B. subtilis CCUG 31949
146735	B. subtilis CCUG 32040
147533	B. subtilis CCUG 33755
147568	B. subtilis CCUG 33816
148233	B. subtilis CCUG 35081
148234	B. subtilis CCUG 35082
148235	B. subtilis CCUG 35083
148236	B. subtilis CCUG 35084
148237	B. subtilis CCUG 35085
148238	B. subtilis CCUG 35086
148239	B. subtilis CCUG 35087
148240	B. subtilis CCUG 35088
148241	B. subtilis CCUG 35089
148242	B. subtilis CCUG 35090
148243	B. subtilis CCUG 35091
148244	B. subtilis CCUG 35092
148245	B. subtilis CCUG 35093
148436	B. subtilis CCUG 35445
149160	B. subtilis CCUG 36967
149203	B. subtilis CCUG 37263
149428	B. subtilis CCUG 37730
149469	B. subtilis CCUG 37799
149478	B. subtilis CCUG 37815 A
149479	B. subtilis CCUG 37815 B
149600	B. subtilis CCUG 38041
149872	B. subtilis CCUG 38587
150261	B. subtilis CCUG 39418
150473	B. subtilis CCUG 41392
150474	B. subtilis CCUG 41393
151897	B. subtilis CCUG 45145
153228	B. subtilis CCUG 48815 A
157307	B. subtilis IMI 347329
157622	B. subtilis 2dA_C27, DSM 103912
157623	B. subtilis SB-14, DSM 109343
158869	B. subtilis Fh040319_C2, DSM 109511
158870	B. subtilis Fh040319_C10, DSM 109512
158871	B. subtilis Fh040319_C12, DSM 109513
158872	B. subtilis Fh040319_C14, DSM 109514
158873	B. subtilis FH4_1, DSM 110116
161119	B. subtilis JCM 11003
162225	B. subtilis JCM 18293
162706	B. subtilis JCM 20036, IAM 1071
162708	B. subtilis JCM 20038, IAM 1076
162718	B. subtilis JCM 20057, IAM 1114
162729	B. subtilis JCM 20073, ATCC 14593, IAM 1145
162736	B. subtilis JCM 20083, IAM 1163
162738	B. subtilis JCM 20085, IAM 1168
162739	B. subtilis JCM 20086, IAM 1169
162746	B. subtilis JCM 20094, IAM 1191
162747	B. subtilis JCM 20095, IAM 1192
162748	B. subtilis JCM 20096, IAM 1193, IFO 3033, NBRC 3033
162755	B. subtilis JCM 20105, IAM 1207
162758	B. subtilis JCM 20108, IAM 1212
162767	B. subtilis JCM 20118, IAM 1231
162773	B. subtilis JCM 20127, IAM 1247
162882	B. subtilis JCM 20333, ATCC 4925, IAM 11060
162883	B. subtilis JCM 20336, ATCC 6460, IAM 11063
162890	B. subtilis JCM 20352, IAM 12019
162891	B. subtilis JCM 20353, IAM 12020
162952	B. subtilis JCM 20520, IAM 12366
163112	B. subtilis JCM 21228, IAM 14446
163798	B. subtilis JCM 30446
164104	B. subtilis JCM 31626
164106	B. subtilis JCM 31628
164275	B. subtilis JCM 32485
174177	B. subtilis CIMB 05-2416, CRBIP17.22
174358	B. subtilis P7, DSM 115556
174359	B. subtilis ZH1, DSM 115557
176404	B. subtilis SZB3, DSM 115815
176405	B. subtilis BEST7003, Bacillus subtilis BEST7003, DSM ...
176406	B. subtilis BP20.15, DSM 119457
176407	B. subtilis BB10.1, DSM 119458

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
123359	positive	rod-shaped

Colony morphology

123359

Hemolysis ability1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
2017	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
36567	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
123359	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
2017	positive	growth	30
36567	positive	growth	30
67770	positive	growth	30
67772	positive	optimum	30
123359	positive	growth	22-55
123359	negative	growth	10

Culture pH

@ref	Ability	Type	PH
123359	positive	growth	6

Physiology and metabolism

Oxygen tolerance

123359

Oxygen tolerancefacultative anaerobe

Antibiotic susceptibility testing

	Test 1	Test 2	Test 3	Test 4	Test 5	Test 6	Test 7	Test 8
@ref	2017	2017	2017	2017	2017	2017	2017	2017
Medium	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Müller-Hinton Agar	Müller-Hinton Agar
Manual annotation	1	1	1	1	1	1	1	1
	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm
Amikacin 30µg (disc)	30	24-26	34	30-32	30-32	28-30	30-32	30
Ampicillin 10µg (disc)	38	24-26	46	34	34	38	34	38
Aztreonam 30µg (disc)	20	8	24	24	24	6	18	30
Bacitracin 10Unit	6	8	10	6	6	6	n.d.	n.d.
Cefalotin 30µg (disc)	50	38	>50	46-48	46-48	50	n.d.	n.d.
Cefazolin 30µg (disc)	42	32	42	40	40	40	n.d.	n.d.
Cefiderocol 30µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	22	20-22
Cefotaxime 30µg (disc)	38-40	26	34	38	38	40	40	40-42
Ceftazidime 10µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	28	30
Ceftriaxone 30µg (disc)	36-38	n.d.	n.d.	36	36	38	38	40
Chloramphenicol 30µg (disc)	34	22-24	36-38	40	40	36-38	30	40
Ciprofloxacin 5µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	36	40
Clindamycin 10µg (disc)	34	n.d.	n.d.	30	30	32	32	34
Colistin 10µg (disc)	10	8	12	10	10	10	n.d.	n.d.
Colistin sulphate 10µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	10	12
Doxycycline 30µg (disc)	32	24	38	34	34	34-36	n.d.	n.d.
Erythromycin 15µg (disc)	36	22	38	34	34	36	34-36	38
Fosfomycin 50µg (disc)	12	n.d.	n.d.	12	12	10	10	0
Gentamicin 30µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	32	28
Gentamycin 10µg (disc)							n.d.	n.d.
Imipenem 10µg (disc)	48	44	50	46	46	48-50	48	50
Kanamycin 30µg (disc)	32	24	34-36	32	32	30	32	30
Levofloxacin 5µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	36	40
Lincomycin 15µg (disc)	20	12	18-20	20	20	20	n.d.	n.d.
Linezolid 10µg (disc)	40	n.d.	n.d.	40	40	42-44	38	42
Meropenem 10µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	40	46
Mezlocillin 30µg (disc)	34	20	40-42	30	30	32-34	n.d.	n.d.
Moxifloxacin 5µg (disc)	38	n.d.	n.d.	36	36	40	36	40
Neomycin 30µg (disc)	24	18-20	30	26	26	24	n.d.	n.d.
Nitrofurantoin 100µg (disc)	24	16-18	28	22	22	24	20-22	28
Norfloxacin 10µg (disc)	34	24	32	32	32	34	n.d.	n.d.
Nystatin 100Unit	0	n.d.	n.d.	0	0	0	n.d.	n.d.
Ofloxacin 5µg (disc)	34	24	32-34	32	32	36	36	36
Oxacillin 5µg (disc)	32-34	26-28	36-38	30-32	30-32	32	32	34
Penicillin G 6µg (disc)	38-40	22	46	34	34	38	34	40
Pipemidic acid 20µg (disc)	22	14	20	22	22	22	n.d.	n.d.
Piperacillin/Tazobactam 40µg (disc)	36	n.d.	n.d.	32	32	34	n.d.	n.d.
Piperacillin/Tazobactam 110µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	36	36
Polymyxin B 300Unit	14	10	16	12-14	12-14	14	14	14
Quinupristin/Dalfopristin 15µg (disc)	22	n.d.	n.d.	20	20	22	n.d.	26
Rifampicin 5µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	20-22	24-26
Teicoplanin 30µg (disc)	22	n.d.	n.d.	20	20	22	22	20-22
Tetracycline 30µg (disc)	24	16	28-30	28	28	26	28	30
Ticarcillin 75µg (disc)	40	24-26	50	38	38	40	36	42
Tigecycline 15µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	30-32	30
Trimethoprim-sulfamethoxazole (1:19) 10µg (disc)	n.d.	n.d.	n.d.	n.d.	n.d.	n.d.	36	42
Vancomycin 30µg (disc)	24	16	30	24	24	26	24	26

Spore formation

@ref	Spore formation	Confidence
123359
125438		95.341

Compound production

@ref	Compound
2017	bacilysin
2017	fengymycin

Halophily

@ref	Salt	Growth	Tested relation	Concentration
123359	NaCl	positive	growth	0-8 %
123359	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
123359	16947 ChEBI	citrate	+	carbon source
68379	16899 ChEBI	D-mannitol	+	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	+	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
123359	4853 ChEBI	esculin	+	hydrolysis
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
68379	28087 ChEBI	glycogen	+	fermentation	from API Coryne
123359	606565 ChEBI	hippurate	-	hydrolysis
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
68379	17632 ChEBI	nitrate	+	reduction	from API Coryne
123359	17632 ChEBI	nitrate	+	reduction
123359	17632 ChEBI	nitrate	+	respiration
123359	16301 ChEBI	nitrite	-	reduction
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68379	16199 ChEBI	urea	+	hydrolysis	from API Coryne

Antibiotic resistance

@ref	ChEBI	Metabolite	Is resistant	Resistance conc.	Is sensitive
123359		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
2017	7660	Nystatin		100 Unit		from Antibiotic test

Metabolite production

@ref	Chebi-ID	Metabolite	Production
123359	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
123359	15688 ChEBI	acetoin	+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
123359	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
123359	amylase	+
68382	beta-galactosidase	+	3.2.1.23	from API zym
123359	beta-galactosidase	+	3.2.1.23
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
123359	caseinase	+	3.4.21.50
123359	catalase	+	1.11.1.6
68379	catalase	+	1.11.1.6	from API Coryne
68382	cystine arylamidase	-	3.4.11.3	from API zym
123359	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
123359	gamma-glutamyltransferase	+	2.3.2.2
123359	gelatinase	+
68379	gelatinase	+		from API Coryne
123359	lecithinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
123359	lipase	-
68382	lipase (C 14)	-		from API zym
123359	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
123359	ornithine decarboxylase	-	4.1.1.17
123359	oxidase	-
123359	protease	+
68379	pyrazinamidase	+	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
68382	trypsin	+	3.4.21.4	from API zym
123359	urease	+	3.5.1.5
68379	urease	+	3.5.1.5	from API Coryne
68382	valine arylamidase	+		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
44121	+	+	+	+	-	+	+	-	+	+	+	-	not determinedn.d.	+	-	+	+	-	+	+	+

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123359	-	+	+	+	-	+	+	-	+	+	+	+	+	+	-	+	+	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
123359	not determinedn.d.	+	+	+	+	+	-	+	+	+	+	+	+	+	-	+	+	+	+	+	+	+	+	+	+	-	-	-	-	-	-	-	+	+	+	+	+	+	-	-	-	-	+	-	+	+	-	-	-	-	+	+	+	-	+	-	+	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-	+	+	-	-	-	-	-	+	-	-	+	+	+	+	+	+	-	-	-	-

Isolation, sampling and environmental information

Isolation

67772

Sampling date1966

Taxonmaps

69479

Global distribution of 16S sequence LN681568 (>99% sequence identity) for Bacillus from Microbeatlas

Aquatic Samples	2854
Soil Samples	3768
Animal Samples	9674
Plant Samples	1905
Total Samples	18201

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
2017	yes, in single cases	1	Risk group (German classification) According to TRBA 466
67772		1
123359		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM169726v1 assembly for Bacillus subtilis subsp. subtilis KCTC 3135	complete	GCA_001697265	135461.32	2912902859	135461	98.88
66792	ASM674184v1 assembly for Bacillus subtilis subsp. subtilis NBRC 13719	complete	GCA_006741845	135461.130	8111651762	135461	98.49
124043	ASM2953741v2 assembly for Bacillus subtilis DSM 10	complete	GCA_029537415	1423.2666	8117398639	1423	98.41
66792	NRS6118B assembly for Bacillus subtilis	complete	GCA_905311435	1423.1875		1423	98.2
66792	NRS6121B assembly for Bacillus subtilis	complete	GCA_905315035	1423.1878		1423	98.2
66792	ASM205596v1 assembly for Bacillus subtilis NCIB 3610	complete	GCA_002055965	1423.413	2916868644	1423	98.18
66792	NRS6128B assembly for Bacillus subtilis	complete	GCA_905315055	1423.1880		1423	98.17
66792	NRS6187B assembly for Bacillus subtilis	complete	GCA_905319545	1423.1895		1423	98.17
124043	ASM2902784v1 assembly for Bacillus subtilis NCIB 3610	complete	GCA_029027845	1423.2620		1423	98.14
66792	NRS6153B assembly for Bacillus subtilis	complete	GCA_905315705	1423.1893		1423	98.05
66792	NRS6099B assembly for Bacillus subtilis	complete	GCA_905310985	1423.1862		1423	97.97
66792	NRS6132B assembly for Bacillus subtilis	complete	GCA_905315015	1423.1873		1423	97.92
66792	ASM608879v1 assembly for Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10	complete	GCA_006088795	535026.25		535026	97.91
66792	NRS6190B assembly for Bacillus subtilis	complete	GCA_905319565	1423.1886		1423	97.9
66792	NRS6103B assembly for Bacillus subtilis	complete	GCA_905310995	1423.1863		1423	97.89
66792	NRS6116B assembly for Bacillus subtilis	complete	GCA_905311385	1423.1867		1423	97.8
66792	NRS6107B assembly for Bacillus subtilis	complete	GCA_905311405	1423.1865		1423	97.79
66792	NRS6134B assembly for Bacillus subtilis	complete	GCA_905315395	1423.1882		1423	97.72
66792	NRS6160B assembly for Bacillus subtilis	complete	GCA_905315715	1423.1891		1423	97.66
66792	NRS6127B assembly for Bacillus subtilis	complete	GCA_905315045	1423.1879		1423	97.61
66792	NRS6183B assembly for Bacillus subtilis	complete	GCA_905319155	1423.1896		1423	97.61
66792	NRS6085B assembly for Bacillus subtilis	complete	GCA_905310975	1423.1861		1423	97.56
66792	NRS6105B assembly for Bacillus subtilis	complete	GCA_905311425	1423.1864		1423	97.45
66792	NRS6131B assembly for Bacillus subtilis	complete	GCA_905315025	1423.1877		1423	97.43
66792	NRS6181B assembly for Bacillus subtilis	complete	GCA_905318255	1423.1890		1423	97.42
66792	NRS6145B assembly for Bacillus subtilis	complete	GCA_905315685	1423.1883		1423	97.01
66792	NRS6186B assembly for Bacillus subtilis	complete	GCA_905319135	1423.1888		1423	97
124043	ASM3791492v1 assembly for Bacillus subtilis DSM 10	complete	GCA_037914925			1423	96.87
66792	NRS6096B assembly for Bacillus subtilis	chromosome	GCA_905311035	1423.1870		1423	86.59
66792	NRS6202B assembly for Bacillus subtilis	contig	GCA_905319535	1423.1897		1423	77.85
66792	NRS6167B assembly for Bacillus subtilis	complete	GCA_905316385	1423.1892		1423	74
67770	ASM1438924v2 assembly for Bacillus subtilis subsp. subtilis DSM 10	contig	GCA_014389245	135461.177		135461	73.24
66792	ASM18608v1 assembly for Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10	chromosome	GCA_000186085	535026.3	643886130	535026	71.97
66792	NRS6206 assembly for Bacillus subtilis	contig	GCA_905319815	1423.1898		1423	70.49
66792	NRS6185 assembly for Bacillus subtilis	contig	GCA_905319145	1423.1894		1423	70.24
66792	NRS6205 assembly for Bacillus subtilis	contig	GCA_905319825	1423.1899		1423	70.16
66792	NRS6120B assembly for Bacillus subtilis	complete	GCA_905312035	1423.1872		1423	69.23
66792	NRS6204 assembly for Bacillus subtilis	contig	GCA_905319795	1423.1889		1423	68.39
124043	ASM3131652v1 assembly for Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10	contig	GCA_031316525	535026.41	8119724414	535026	68.32
66792	NRS6141 assembly for Bacillus subtilis	contig	GCA_905315375	1423.1881		1423	68.19
66792	NRS6084 assembly for Bacillus subtilis	contig	GCA_905311025	1423.1869		1423	68.17
66792	NRS6094 assembly for Bacillus subtilis	contig	GCA_905311015	1423.1868		1423	67.95
66792	NRS6111 assembly for Bacillus subtilis	contig	GCA_905311375	1423.1871		1423	67.84
66792	NRS6137 assembly for Bacillus subtilis	contig	GCA_905315385	1423.1884		1423	67.04
66792	NRS6092 assembly for Bacillus subtilis	contig	GCA_905311005	1423.1876		1423	66.41
66792	NRS6148 assembly for Bacillus subtilis	contig	GCA_905315695	1423.1887		1423	65.26
66792	NRS6110 assembly for Bacillus subtilis	contig	GCA_905311415	1423.1866		1423	63.85
66792	NRS6108 assembly for Bacillus subtilis	contig	GCA_905311395	1423.1874		1423	62.33
66792	NRS6194 assembly for Bacillus subtilis	contig	GCA_905319555	1423.1885		1423	52.13
66792	27294_A01 assembly for Bacillus subtilis NCTC3610	contig	GCA_900445475	1423.560	2916888191	1423	36.06

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Bacillus subtilis strain ATCC 6051 16S ribosomal RNA gene, partial sequence	JF749278	804	535026
20218	Bacillus subtilis subsp. subtilis strain BCRC 10255 16S ribosomal RNA gene, partial sequence	EF423592	1468	135461
20218	Bacillus subtilis 16S rRNA gene, strain DSM10	AJ276351	1517	1423
20218	Bacillus subtilis strain DSM10 16S ribosomal RNA gene, partial sequence	JQ424889	1463	1423
20218	Bacillus subtilis gene for 16S rRNA, partial sequence	AB006938	274	1423
20218	Bacillus subtilis gene for 16S ribosomal RNA, partial sequence	AB042061	1553	1423
20218	Bacillus subtilis subsp. subtilis gene for 16S rRNA, partial sequence, strain: JCM 1465	AB598736	1472	135461
20218	Bacillus subtilis strain KCTC 3135 16S ribosomal RNA gene, partial sequence	FJ917386	1454	1423
20218	Bacillus subtilis strain KCTC 3135 16S-23S ribosomal RNA intergenic spacer, complete sequence	FJ969770	165	1423
20218	Bacillus subtilis gene for 16S rRNA, partial sequence, strain: NBRC 12210	AB680257	1475	1423
20218	Bacillus subtilis subsp. subtilis gene for 16S rRNA, partial sequence	AB271744	1475	135461
20218	B.subtilis 16S ribosomal RNA	X60646	1427	1423
2017	Bacillus subtilis partial 16S rRNA gene, type strain DSM 10T	LN681568	1502	1423
124043	Bacillus subtilis strain IAM 12118 16S ribosomal RNA gene, partial sequence.	KR818223	1262	1423
124043	Bacillus subtilis IAM 12118 gene for 16S rRNA, partial sequence.	LC752374	589	1423
124043	Bacillus subtilis strain BCRC 10255 16S ribosomal RNA gene, partial sequence.	OK394049	1397	1423
124043	Bacillus subtilis strain JCM 1465 16S ribosomal RNA gene, partial sequence.	ON041099	1413	1423
124043	Bacillus subtilis strain DSM 10 16S ribosomal RNA gene, partial sequence.	MK256302	707	1423
124043	Bacillus subtilis strain DSM 10 16S ribosomal RNA gene, partial sequence.	MW049219	1513	1423
124043	Bacillus subtilis subsp. subtilis strain DSM 10 16S ribosomal RNA gene, partial sequence.	KJ812207	1429	135461
124043	Bacillus subtilis strain DSM 10 16S ribosomal RNA gene, partial sequence.	MN077147	1510	1423
124043	Bacillus subtilis strain DSM 10 16S ribosomal RNA gene, partial sequence.	MK182759	1458	1423
124043	Bacillus subtilis strain DSM 10 16S ribosomal RNA gene, partial sequence.	MG722645	399	1423
124043	Bacillus subtilis strain DSM 10 16S ribosomal RNA gene, partial sequence.	MK182802	1397	1423
124043	Bacillus subtilis 16S ribosomal RNA gene, partial sequence.	MW471618	1456	1423
124043	Bacillus subtilis strain DSM 10 16S ribosomal RNA gene, partial sequence.	PQ835930	1171	1423
124043	Bacillus subtilis group sp. strain DSM 10 16S ribosomal RNA gene, partial sequence.	OR544503	693	2571209
124043	Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10 16S ribosomal RNA gene, partial sequence.	PQ482394	1475	535026
124043	Bacillus subtilis strain IAM 12118 16S ribosomal RNA gene, partial sequence.	MZ315033	1550	1423
124043	Bacillus subtilis strain IAM 12118 16S ribosomal RNA gene, partial sequence.	PV523860	1521	1423
124043	Bacillus subtilis strain IAM 12118 16S ribosomal RNA gene, partial sequence.	MK503723	436	1423
124043	Bacillus subtilis strain IAM 12118 16S ribosomal RNA gene, partial sequence.	MG645260	881	1423
124043	Bacillus subtilis strain IAM 12118 16S ribosomal RNA gene, partial sequence.	MK267098	1519	1423
124043	Bacillus subtilis strain IAM 12118 16S ribosomal RNA gene, partial sequence.	PV528986	998	1423
124043	Bacillus subtilis strain IAM 12118 16S ribosomal RNA gene, partial sequence.	MN326675	1450	1423
124043	Bacillus subtilis strain IAM 12118 16S ribosomal RNA gene, partial sequence.	PV616805	1517	1423
124043	Bacillus subtilis strain IAM 12118 16S ribosomal RNA gene, partial sequence.	PV528955	984	1423
124043	Bacillus subtilis strain JCM 1465 16S ribosomal RNA gene, partial sequence.	KY013010	1343	1423
124043	Bacillus subtilis strain JCM 1465 16S ribosomal RNA gene, partial sequence.	MN749805	1398	1423
124043	Bacillus subtilis strain JCM 1465 16S ribosomal RNA gene, partial sequence.	PV563685	1188	1423
124043	Bacillus subtilis strain JCM 1465 16S ribosomal RNA gene, partial sequence.	PV952978	886	1423
124043	Bacillus subtilis strain JCM 1465 16S ribosomal RNA gene, partial sequence.	MH145363	1445	1423
124043	Bacillus subtilis strain JCM 1465 16S ribosomal RNA gene, partial sequence.	MG015919	430	1423
124043	Bacillus subtilis strain GP JCM 1465 16S ribosomal RNA gene, partial sequence.	OP415431	1126	1423
124043	Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 16S ribosomal RNA gene, partial sequence.	MN640967	1419	535026
124043	Bacillus subtilis strain NCIB 3610 16S ribosomal RNA gene, partial sequence.	PQ740426	1093	1423
124043	Bacillus subtilis subsp. subtilis strain NCIB 3610(T) 16S ribosomal RNA gene, partial sequence.	MK559753	1231	135461
124043	Bacillus subtilis strain NCIB 3610 16S ribosomal RNA gene, partial sequence.	MT421926	872	1423
124043	Bacillus subtilis strain NCIB 3610 16S ribosomal RNA gene, partial sequence.	OR841472	1409	1423
124043	Bacillus subtilis strain NRRL NRS-744 16S ribosomal RNA gene, partial sequence.	EU138520	1168	1423
124043	Bacillus subtilis strain NRRL B-4219 16S ribosomal RNA gene, partial sequence.	EU138454	1168	1423

GC content

@ref	GC-content (mol%)	Method
2017	43.1	Buoyant density centrifugation (BD)
2017	42.9	thermal denaturation, midpoint method (Tm)
67770	45.6	fluorimetric
67770	43

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Bacillus subtilis NCIB 3610
NCBI: GCA_002055965

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	73.00	no
125439	motility	BacteriaNetⓘ	yes	70.70	no
125439	gram_stain	BacteriaNetⓘ	variable	81.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	70.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bacillus subtilis NCIB 3610
NCBI: GCA_002055965.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	82.73	no
125438	anaerobic	anaerobicⓘ	no	89.46	yes
125438	aerobic	aerobicⓘ	yes	68.98	yes
125438	spore-forming	spore-formingⓘ	yes	95.34	no
125438	thermophilic	thermophileⓘ	no	94.59	yes
125438	flagellated	motile2+ⓘ	yes	88.40	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Enhancing the anti-clogging performance of emitters in drip irrigation systems based on Bacillus subtilis strain DSM 10 and controlled replacement cycles	Kong N, Qiu X, Wang Q, Wu Z, Wang J, Tan Z, Wang H, He Q.	Biosyst Eng		2025
	Proteolytic Bacillus sp. Isolation and Identification from Tannery Alkaline Baths.	Lageiro M, Simoes F, Alvarenga N, Reis A.	Molecules	10.3390/molecules30173632	2025
Genetics	Exploring genetic diversity and genomic insights of Bacillus subtilis isolates from cassava rhizosphere using molecular barcoding and whole genome sequencing.	Sraphet S, Javadi B.	Sci Rep	10.1038/s41598-025-08736-2	2025
	In Vitro and In Vivo Evaluation of Autochthonous Probiotics and Their Effects on the Mucosal Health of Nile Tilapia (Oreochromis niloticus).	Abarra ST, Maulu S, Odu-Onikosi SG, Momoh TA, Eynon B, Emery M, Rawling M, Merrifield DL.	Animals (Basel)	10.3390/ani15223296	2025
	Rhizospheric and Endophytic Plant Growth-Promoting Bacteria Associated with Coffea arabica L. and Coffea canephora Pierre ex Froehner: A Review of Their Agronomic Potential.	Ramirez-Lopez M, Bautista-Cruz A, Toledo-Lopez A, Aquino-Bolanos T.	Microorganisms	10.3390/microorganisms13112567	2025
	Fermentation Products Originated from Bacillus subtilis Promote Hepatic-Intestinal Health in Largemouth Bass, Micropterus salmoides.	Liu K, Liu S, Feng D, Xun P, Jiang H, Zhang Y, Yuan G, Guo X.	Biology (Basel)	10.3390/biology14060646	2025
Genetics	Comprehensive genomic analysis of Bacillus subtilis and Bacillus paralicheniformis associated with the pearl millet panicle reveals their antimicrobial potential against important plant pathogens.	Ashajyothi M, Mahadevakumar S, Venkatesh YN, Sarma PVSRN, Danteswari C, Balamurugan A, Prakash G, Khandelwal V, Tarasatyavathi C, Podile AR, Mysore KS, Chandranayaka S.	BMC Plant Biol	10.1186/s12870-024-04881-4	2024
	Potential antimicrobial and fruit juice clarification activity of amylase enzyme from Bacillus strains.	Hossain KM, Khan U, Mahbubur Rahman SM, Khan MS.	Biotechnol Rep (Amst)	10.1016/j.btre.2024.e00861	2024
	Preservation of Bacillus subtilis' cellular liquid state at deep sub-zero temperatures in perchlorate brines.	Gault S, Fonseca F, Cockell CS.	Commun Biol	10.1038/s42003-024-06277-4	2024
Genetics	Isolation of starch and protein degrading strain Bacillus subtilis FYZ1-3 from tobacco waste and genomic analysis of its tolerance to nicotine and inhibition of fungal growth.	Ye C, Liu D, Huang K, Li D, Ma X, Jin Y, Xiong H.	Front Microbiol	10.3389/fmicb.2023.1260149	2023
	Cordypyridones E-J: Antibiofilm 2-Pyridone Alkaloids from the Nematode Antagonistic Fungus Laburnicola nematophila.	Wennrich JP, Holzenkamp C, Fushimi S, Ibrahim MAA, Ashrafi S, Maier W, Schrey H, Ebada SS, Stadler M.	J Nat Prod	10.1021/acs.jnatprod.5c00768	2025
	Growth-Promoting Effects of Ten Soil Bacterial Strains on Maize, Tomato, Cucumber, and Pepper Under Greenhouse Conditions.	Andelkovic J, Mihajilov Krstev T, Dimkic I, Unkovic N, Stankovic D, Jokovic N.	Plants (Basel)	10.3390/plants14121874	2025
	Antibiofilm and cytotoxic metabolites from the entomopathogenic fungus Samsoniella aurantia.	Toshe R, Khalid SJ, Kemkuignou BM, Charria-Giron E, Eckhardt P, Sandargo B, Nuchthien K, Luangsa-Ard JJ, Opatz T, Schrey H, Ebada SS, Stadler M.	Beilstein J Org Chem	10.3762/bjoc.21.23	2025
	Fatty acid based antimicrobials from Streptomyces sp. SORS-24, an endophyte isolated from Sonchus oleraceus.	Tanvir R, Sajid I, Rehman Y, Hasnain S.	Lett Appl Microbiol	10.1093/lambio/ovad080	2023
Genetics	Draft genome sequences of two biocontrol agents isolated from the maize phyllosphere: Bacillus subtilis strain EM-A7 and Bacillus velezensis strain EM-A8.	Fessia A, Sartori M, Orlando J, Barros G, Nesci A.	Heliyon	10.1016/j.heliyon.2024.e32607	2024
	New Streptomyces-Derived Antibacterial Compounds Targeting Gram-Positive Bacteria: A Systematic Review.	Ait Assou S, El Hassouni M.	ScientificWorldJournal	10.1155/tswj/6659874	2025
	In vitro and In silico investigation deciphering novel antifungal activity of endophyte Bacillus velezensis CBMB205 against Fusarium oxysporum.	R V, Granada DL, Skariyachan S, P U, K S.	Sci Rep	10.1038/s41598-024-77926-1	2025
	Whole-genome sequencing and phylogenomic analyses of a novel zearalenone-degrading Bacillus subtilis B72.	Li K, Jia J, Xu Q, Wu N.	3 Biotech	10.1007/s13205-023-03517-y	2023
Genetics	Lienhwalides: Unique Tropolone-Maleidride Hybrids from Hypoxylon lienhwacheense.	Schmidt K, Charria-Giron E, Gorelik TE, Kleeberg C, Muema JM, Heitkamper S, Verwaaijen B, Kuhnert E, Gerke J, Kalinowski J, Hyde KD, Stadler M, Cox R, Surup F.	Chembiochem	10.1002/cbic.202500037	2025
	Profiling and Bioactivity of Polyphenols from the Omani Medicinal Plant Terminalia dhofarica (syn. Anogeissus dhofarica).	Kappen J, Rashan L, Franke K, Wessjohann LA.	Molecules	10.3390/molecules30040952	2025
Phylogeny	Molecular characterization and prevalence of Bacillus species isolated from Saudi hospitals.	Bakri MM.	J Taibah Univ Med Sci	10.1016/j.jtumed.2022.10.016	2023
	Kinetics of inactivation of bacteria responsible for infections in hospitals using UV-LED.	Rito B, Matos L, Proenca DN, Morais PV.	Heliyon	10.1016/j.heliyon.2024.e30738	2024
	A Halophilic Bacterium for Bioremediation of Saline-Alkali Land: The Triadic and Synergetic Response Mechanism of Oceanobacillus picturae DY09 to Salt Stress.	Nie T, Wang L, Liu Y, Fu S, Wang J, Cui K, Wang L.	Microorganisms	10.3390/microorganisms13071474	2025
	The Probiotic Bacillus subtilis MB40 Improves Immunity in a Porcine Model of Listeriosis.	Garvey SM, Emami NK, Guice JL, Sriranganathan N, Penet C, Rhoads RP, Spears JL, Dalloul RA, El-Kadi SW.	Microorganisms	10.3390/microorganisms11082110	2023
	Cytotoxic naphtho- and benzofurans from an endophytic fungus Epicoccum nigrum Ann-B-2 associated with Annona squamosa fruits.	Elnaggar MS, Fayez S, Anwar A, Ebada SS.	Sci Rep	10.1038/s41598-024-55168-5	2024
	The limitless endophytes: their role as antifungal agents against top priority pathogens.	Moussa AY.	Microb Cell Fact	10.1186/s12934-024-02411-3	2024
	Application of an Ultrasonic Nebulizer Closet in the Disinfection of Textiles and Footwear.	Henriques TM, Rito B, Proenca DN, Morais PV.	Int J Environ Res Public Health	10.3390/ijerph191710472	2022
	ent-Clavilactone J and Its Quinone Derivative, Meroterpenoids from the Fungus Resupinatus sp.	Harms K, Paomephan P, Boonpratuang T, Choeyklin R, Boonchird C, Surup F.	J Nat Prod	10.1021/acs.jnatprod.3c00174	2023
	Saarvienin A-A Novel Glycopeptide with Potent Activity against Drug-Resistant Bacteria.	Kaur A, Guerrero-Garzon JF, Rasheed S, Zehl M, Fries F, Morgenstern B, Zotchev SB, Muller R.	Angew Chem Int Ed Engl	10.1002/anie.202425588	2025
	Bioactive Naphtho-alpha-Pyranones from Two Endophytic Fungi of the Genus Polyphilus.	Wennrich JP, Sepanian E, Ebada SS, Llanos-Lopez NA, Ashrafi S, Maier W, Kurtan T, Stadler M.	Antibiotics (Basel)	10.3390/antibiotics12081273	2023
	Conjugation of Polycationic Peptides Extends the Efficacy Spectrum of beta-Lactam Antibiotics.	Werner J, Umstatter F, Bohmann MB, Muller H, Beijer B, Hertlein T, Kaschnitz L, Bram V, Kleist C, Klika KD, Muhlberg E, Braune G, Wohlfart S, Gartner M, Peter S, Zimmermann S, Haberkorn U, Ohlsen K, Brotz-Oesterhelt H, Mier W, Uhl P.	Adv Sci (Weinh)	10.1002/advs.202411406	2024
	Strong antagonism of an endophyte of Fraxinus excelsior towards the ash dieback pathogen, Hymenoscyphus fraxineus, is mediated by the antifungal secondary metabolite PF1140.	Demir O, Schulz B, Rabsch L, Steinert M, Surup F.	Appl Environ Microbiol	10.1128/aem.00665-24	2024
	Bioactive Compounds from an Endophytic Pezicula sp. Showing Antagonistic Effects against the Ash Dieback Pathogen	Demir O, Zeng H, Schulz B, Schrey H, Steinert M, Stadler M, Surup F.	Biomolecules		2023
	Anaerobic solid-state fermentation with Bacillus subtilis for digesting free gossypol and improving nutritional quality in cottonseed meal.	Li J, Gao T, Hao Z, Guo X, Zhu B.	Front Nutr	10.3389/fnut.2022.1017637	2022
	Exploring the Antibiotic Production Potential of Heterotrophic Bacterial Communities Isolated from the Marine Sponges Crateromorpha meyeri, Pseudaxinella reticulata, Farrea similaris, and Caulophacus arcticus through Synergistic Metabolomic and Genomic Analyses.	Tareen S, Schupp PJ, Iqbal N, Wink J.	Mar Drugs	10.3390/md20070463	2022
	Optimization of the biosynthesis of silver nanoparticles using bacterial extracts and their antimicrobial potential.	Solis-Sandi I, Cordero-Fuentes S, Pereira-Reyes R, Vega-Baudrit JR, Batista-Menezes D, Montes de Oca-Vasquez G.	Biotechnol Rep (Amst)	10.1016/j.btre.2023.e00816	2023
	Exploring the identification of multiple bacteria on stainless steel using multi-scale spectral imaging from microscopic to macroscopic.	Xu JL, Herrero-Langreo A, Lamba S, Ferone M, Swanson A, Caponigro V, Scannell AGM, Gowen AA.	Sci Rep	10.1038/s41598-022-19617-3	2022
	Bioprospection of Tenellins Produced by the Entomopathogenic Fungus Beauveria neobassiana.	Toshe R, Charria-Giron E, Khonsanit A, Luangsa-Ard JJ, Khalid SJ, Schrey H, Ebada SS, Stadler M.	J Fungi (Basel)	10.3390/jof10010069	2024
Enzymology	Characterization of redox and salinity-tolerant alkaline protease from Bacillus halotolerans strain DS5.	Wen Y, Qiang J, Zhou G, Zhang X, Wang L, Shi Y.	Front Microbiol	10.3389/fmicb.2022.935072	2022
	Assessment of the feed additives consisting of Lactiplantibacillus plantarum DSM 3676, Lactiplantibacillus plantarum DSM 3677 and Lentilactobacillus buchneri DSM 13573 for all animal species for the renewal of their authorisations (ADDCON GmbH).	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Dusemund B, Durjava M, Kouba M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Sanz Y, Villa RE, Woutersen R, Freixa MA, Brozzi R, Garcia-Cazorla Y.	EFSA J	10.2903/j.efsa.2023.8162	2023
	Temperature-Dependent tRNA Modifications in Bacillales.	Hoffmann A, Lorenz C, Fallmann J, Wolff P, Lechner A, Betat H, Morl M, Stadler PF.	Int J Mol Sci	10.3390/ijms25168823	2024
	5-Keto-D-Fructose, a Natural Diketone and Potential Sugar Substitute, Significantly Reduces the Viability of Prokaryotic and Eukaryotic Cells.	Hovels M, Gallala N, Keriakes SL, Konig AP, Schiessl J, Laporte T, Kosciow K, Deppenmeier U.	Front Microbiol	10.3389/fmicb.2022.935062	2022
	Comprehensive Cell Biological Investigation of Cytochalasin B Derivatives with Distinct Activities on the Actin Network.	Kagho MD, Schmidt K, Lambert C, Kaufmann T, Jia L, Faix J, Rottner K, Stadler M, Stradal T, Klahn P.	J Nat Prod	10.1021/acs.jnatprod.4c00676	2024
	Furaquinocins K and L: Novel Naphthoquinone-Based Meroterpenoids from Streptomyces sp. Je 1-369.	Tistechok S, Stierhof M, Myronovskyi M, Zapp J, Gromyko O, Luzhetskyy A.	Antibiotics (Basel)	10.3390/antibiotics11111587	2022
	Complete and Draft Genome Sequences of 52 Bacillus and Priestia Strains Isolated from West African Fermentations and 26 Reference Strains from a Public Culture Collection.	Wiedenbein ES, Canoy TS, Hui Y, Parkouda C, Compaore CS, Ametefe E, Jakobsen M, Jespersen L, Nielsen DS.	Microbiol Resour Announc	10.1128/mra.00394-23	2023
	Unconventional semi-solid cultivation enhances cytochalasins production by the Colombian fungus Xylaria sp. CM-UDEA-H199.	Valencia-Revelo D, Charria-Giron E, Schmidt K, Reinecke S, Vasco-Palacios AM, Stradal T, Marin-Felix Y, Caicedo-Ortega NH, Ebada SS.	BMC Biotechnol	10.1186/s12896-025-00978-2	2025
	Prenylated Isoflavanones with Antimicrobial Potential from the Root Bark of Dalbergia melanoxylon.	Chalo DM, Franke K, Nchiozem-Ngnitedem VA, Kakudidi E, Origa-Oryem H, Namukobe J, Kloss F, Yenesew A, Wessjohann LA.	Metabolites	10.3390/metabo13060678	2023
	Links between Soil Bacteriobiomes and Fungistasis toward Fungi Infecting the Colorado Potato Beetle.	Chertkova E, Kabilov MR, Yaroslavtseva O, Polenogova O, Kosman E, Sidorenko D, Alikina T, Noskov Y, Krivopalov A, Glupov VV, Kryukov VY.	Microorganisms	10.3390/microorganisms11040943	2023
Metabolism	Micrococcin P1 and P2 from Epibiotic Bacteria Associated with Isolates of Moorea producens from Kenya.	Dzeha T, Hall MJ, Burgess JG.	Mar Drugs	10.3390/md20020128	2022
Phylogeny	Identification and Characterisation of Endophytic Bacteria from Coconut (Cocos nucifera) Tissue Culture.	Salo EN, Novero A.	Trop Life Sci Res	10.21315/tlsr2020.31.1.4	2020
	Protoilludene and Alkenoic Acid Derivatives from the European Polypore Fomitiporia hartigii.	Chemutai Sum W, Ebada SS, Wang H, Kellner H, Stadler M.	ACS Omega	10.1021/acsomega.4c04287	2024
	Sequential Separation of Essential Oil Components during Hydrodistillation of Fresh Foliage from Azorean Cryptomeria japonica (Cupressaceae): Effects on Antibacterial, Antifungal, and Free Radical Scavenging Activities.	Arruda F, Lima A, Wortham T, Janeiro A, Rodrigues T, Baptista J, Rosa JS, Lima E.	Plants (Basel)	10.3390/plants13131729	2024
	Antioxidant and antimicrobial activities of Spirulina platensis extracts and biogenic selenium nanoparticles against selected pathogenic bacteria and fungi.	Abdel-Moneim AE, El-Saadony MT, Shehata AM, Saad AM, Aldhumri SA, Ouda SM, Mesalam NM.	Saudi J Biol Sci	10.1016/j.sjbs.2021.09.046	2022
	Five Tetramic Acid Derivatives Isolated from the Iranian Fungus Colpoma quercinum CCTU A372.	Primahana G, Narmani A, Surup F, Teponno RB, Arzanlou M, Stadler M.	Biomolecules	10.3390/biom11060783	2021
	Screening of Red Sea- and Mediterranean Sea-derived Actinomycetes for Antimicrobial and Antitumor activities: LC-ESI-HRMS-based Metabolomics Study.	Abdel-Razik MA, Azmy AF, Dishisha T, El-Gendy AO, Afzan A, Kamal N, Tawfike A, Sebak M.	Microb Cell Fact	10.1186/s12934-025-02759-0	2025
	Cytotoxic and antimicrobial activities of secondary metabolites isolated from the deep-sea-derived Actinoalloteichus cyanogriseus 12A22.	Zhang X, Song C, Bai Y, Hu J, Pan H.	3 Biotech	10.1007/s13205-021-02846-0	2021
Pathogenicity	Sandacrabins - Structurally Unique Antiviral RNA Polymerase Inhibitors from a Rare Myxobacterium.	Bader CD, Panter F, Garcia R, Tchesnokov EP, Haid S, Walt C, Sproer C, Kiefer AF, Gotte M, Overmann J, Pietschmann T, Muller R.	Chemistry	10.1002/chem.202104484	2022
	Photobacterium arenosum WH24, Isolated from the Gill of Pacific Oyster Crassostrea gigas from the North Sea of Germany: Co-cultivation and Prediction of Virulence.	Pira H, Risdian C, Musken M, Schupp PJ, Wink J.	Curr Microbiol	10.1007/s00284-022-02909-2	2022
	Meroterpenoids Possibly Produced by a Bacterial Endosymbiont of the Tropical Basidiomycete Echinochaete brachypora.	Hassan K, Chepkirui C, Llanos-Lopez NA, Matasyoh JC, Decock C, Marin-Felix Y, Stadler M.	Biomolecules	10.3390/biom12060755	2022
Phylogeny	Challenging Structure Elucidation of Lumnitzeralactone, an Ellagic Acid Derivative from the Mangrove Lumnitzera racemosa.	Kappen J, Manurung J, Fuchs T, Vemulapalli SPB, Schmitz LM, Frolov A, Agusta A, Muellner-Riehl AN, Griesinger C, Franke K, Wessjohann LA.	Mar Drugs	10.3390/md21040242	2023
Biotechnology	Attenuation of toxicity and occurrence of degradation products of the fungicide tebuconazole after combined vacuum UV and UVC treatment of drinking water.	Del Puerto O, Goncalves NPF, Medana C, Prevot AB, Roslev P.	Environ Sci Pollut Res Int	10.1007/s11356-022-19691-0	2022
	Water Stress-Driven Changes in Bacterial Cell Surface Properties.	Karagulyan M, Goebel MO, Diehl D, Abu Quba AA, Kastner M, Bachmann J, Wick LY, Schaumann GE, Miltner A.	Appl Environ Microbiol	10.1128/aem.00732-22	2022
	Data associated with the characterization and presumptive identification of Bacillus and related species isolated from honey samples by using HiCrome Bacillus agar.	Alippi AM.	Data Brief	10.1016/j.dib.2019.104206	2019
	Bioactive Bioxanthracene and Cyclodepsipeptides from the Entomopathogenic Fungus Blackwellomyces roseostromatus BCC56290.	Phutthacharoen K, Llanos-Lopez NA, Toshe R, Noisripoom W, Khonsanit A, Luangsa-Ard JJ, Hyde KD, Ebada SS, Stadler M.	Antibiotics (Basel)	10.3390/antibiotics13070585	2024
	Machine learning-based identification of key biotic and abiotic drivers of mineral weathering rate in a complex enhanced weathering experiment.	Janssens I, Servotte T, Calogiuri T, Mortier S, Niron H, Corbett T, Poetra RP, Rieder L, Van Tendeloo M, Singh A, Latre S, Vlaminck SE, Hartmann J, van Groenigen JW, Neubeck A, Vidal A, Janssens IA, Hagens M, Vicca S, Verdonck T.	Open Res Eur	10.12688/openreseurope.19252.3	2025
	The inhibitory effect of dextranases from Bacillus velezensis and Pseudomonas stutzeri on Streptococcus mutans biofilm.	Mahmoud S, Gaber Y, Khattab RA, Bakeer W, Dishisha T, Ramadan MA.	Iran J Microbiol	10.18502/ijm.v14i6.11260	2022
Enzymology	Regio- and Stereoselective Epoxidation and Acidic Epoxide Opening of Antibacterial and Antiplasmodial Chlorotonils Yield Highly Potent Derivatives.	Hofer W, Oueis E, Fayad AA, Deschner F, Andreas A, de Carvalho LP, Huttel S, Bernecker S, Patzold L, Morgenstern B, Zaburannyi N, Bischoff M, Stadler M, Held J, Herrmann J, Muller R.	Angew Chem Int Ed Engl	10.1002/anie.202202816	2022
	Sporothioethers: deactivated alkyl citrates from the fungus Hypomontagnella monticulosa.	Heinemann H, Becker K, Schrey H, Zeng H, Stadler M, Cox RJ.	RSC Adv	10.1039/d3ra06542a	2023
Phylogeny	Bioactive Phenolic Compounds from Peperomia obtusifolia.	Ware I, Franke K, Hussain H, Morgan I, Rennert R, Wessjohann LA.	Molecules	10.3390/molecules27144363	2022
Phylogeny	Discrimination of Stressed and Non-Stressed Food-Related Bacteria Using Raman-Microspectroscopy.	Klein D, Breuch R, Reinmuller J, Engelhard C, Kaul P.	Foods	10.3390/foods11101506	2022
	Arcopilins: A New Family of Staphylococcus aureus Biofilm Disruptors from the Soil Fungus Arcopilus navicularis.	Charria-Giron E, Zeng H, Gorelik TE, Pahl A, Truong KN, Schrey H, Surup F, Marin-Felix Y.	J Med Chem	10.1021/acs.jmedchem.4c00585	2024
Enzymology	Biological Activities of Some New Secondary Metabolites Isolated from Endophytic Fungi: A Review Study.	Zheng R, Li S, Zhang X, Zhao C.	Int J Mol Sci	10.3390/ijms22020959	2021
Phylogeny	Characterisation and Classification of Foodborne Bacteria Using Reflectance FTIR Microscopic Imaging.	Xu JL, Herrero-Langreo A, Lamba S, Ferone M, Scannell AGM, Caponigro V, Gowen AA.	Molecules	10.3390/molecules26206318	2021
	Investigations Into the Suitability of Bacterial Suspensions as Biological Indicators for Low-Energy Electron Irradiation.	Schopf S, Gotzmann G, Dietze M, Gerschke S, Kenner L, Konig U.	Front Immunol	10.3389/fimmu.2022.814767	2022
Metabolism	Genome-Guided Discovery of the First Myxobacterial Biarylitide Myxarylin Reveals Distinct C-N Biaryl Crosslinking in RiPP Biosynthesis.	Hug JJ, Frank NA, Walt C, Senica P, Panter F, Muller R.	Molecules	10.3390/molecules26247483	2021
	Endophytes: a uniquely tailored source of potential antibiotic adjuvants.	Moussa AY.	Arch Microbiol	10.1007/s00203-024-03891-y	2024
Genetics	A molecular phylogenetic framework for Bacillus subtilis using genome sequences and its application to Bacillus subtilis subspecies stecoris strain D7XPN1, an isolate from a commercial food-waste degrading bioreactor.	Adelskov J, Patel BKC.	3 Biotech	10.1007/s13205-016-0408-8	2016
	Bacillus subtilis Fermentation of Malva verticillata Leaves Enhances Antioxidant Activity and Osteoblast Differentiation.	Moon K, Lee S, Cha J.	Foods	10.3390/foods9050671	2020
	Machine Learning Algorithms Applied to Identify Microbial Species by Their Motility.	Riekeles M, Schirmack J, Schulze-Makuch D.	Life (Basel)	10.3390/life11010044	2021
Pathogenicity	Anti-Infective and Antiviral Activity of Valinomycin and Its Analogues from a Sea Cucumber-Associated Bacterium, Streptomyces sp. SV 21.	Wibowo JT, Kellermann MY, Kock M, Putra MY, Murniasih T, Mohr KI, Wink J, Praditya DF, Steinmann E, Schupp PJ.	Mar Drugs	10.3390/md19020081	2021
	Dry-Caribbean Bacillus spp. Strains Ameliorate Drought Stress in Maize by a Strain-Specific Antioxidant Response Modulation.	Moreno-Galvan A, Romero-Perdomo FA, Estrada-Bonilla G, Meneses CHSG, Bonilla RR.	Microorganisms	10.3390/microorganisms8060823	2020
Pathogenicity	Effect of UV-A, UV-B and UV-C irradiation of glyphosate on photolysis and mitigation of aquatic toxicity.	Papagiannaki D, Medana C, Binetti R, Calza P, Roslev P.	Sci Rep	10.1038/s41598-020-76241-9	2020
Enzymology	Optimization of sporulation and purification methods for sporicidal efficacy assessment on Bacillus spores.	Li L, Jin J, Hu H, Deveau IF, Foley SL, Chen H.	J Ind Microbiol Biotechnol	10.1093/jimb/kuac014	2022
	Endophytic Fungi: An Effective Alternative Source of Plant-Derived Bioactive Compounds for Pharmacological Studies.	Wen J, Okyere SK, Wang S, Wang J, Xie L, Ran Y, Hu Y.	J Fungi (Basel)	10.3390/jof8020205	2022
Phylogeny	Investigation and Rapid Discrimination of Food-Related Bacteria under Stress Treatments Using IR Microspectroscopy.	Klein D, Breuch R, Reinmuller J, Engelhard C, Kaul P.	Foods	10.3390/foods10081850	2021
	Nonocarbolines A-E, beta-Carboline Antibiotics Produced by the Rare Actinobacterium Nonomuraea sp. from Indonesia.	Primahana G, Risdian C, Mozef T, Sudarman E, Kock M, Wink J, Stadler M.	Antibiotics (Basel)	10.3390/antibiotics9030126	2020
	Two New Triterpenes from Basidiomata of the Medicinal and Edible Mushroom, Laetiporus sulphureus.	Hassan K, Matio Kemkuignou B, Stadler M.	Molecules	10.3390/molecules26237090	2021
Pathogenicity	Biofilm Inhibitory Abscisic Acid Derivatives from the Plant-Associated Dothideomycete Fungus, Roussoella sp.	Phukhamsakda C, Macabeo APG, Yuyama KT, Hyde KD, Stadler M.	Molecules	10.3390/molecules23092190	2018
Proteome	Unified Workflow for the Rapid and In-Depth Characterization of Bacterial Proteomes.	Abele M, Doll E, Bayer FP, Meng C, Lomp N, Neuhaus K, Scherer S, Kuster B, Ludwig C.	Mol Cell Proteomics	10.1016/j.mcpro.2023.100612	2023
Pathogenicity	Synthesis and Bioactivity of Ancorinoside B, a Marine Diglycosyl Tetramic Acid.	Soliga KJ, Bar SI, Oberhuber N, Zeng H, Schrey H, Schobert R.	Mar Drugs	10.3390/md19100583	2021
	Natural and engineered xylosyl products from microbial source.	Qi J, Kang SJ, Zhao L, Gao JM, Liu C.	Nat Prod Bioprospect	10.1007/s13659-024-00435-1	2024
	Multifunctional in vitro, in silico and DFT analyses on antimicrobial BagremycinA biosynthesized by Micromonospora chokoriensis CR3 from Hieracium canadense.	Tanvir R, Ijaz S, Sajid I, Hasnain S.	Sci Rep	10.1038/s41598-024-61490-9	2024
	No Effect of Microgravity and Simulated Mars Gravity on Final Bacterial Cell Concentrations on the International Space Station: Applications to Space Bioproduction.	Santomartino R, Waajen AC, de Wit W, Nicholson N, Parmitano L, Loudon CM, Moeller R, Rettberg P, Fuchs FM, Van Houdt R, Finster K, Coninx I, Krause J, Koehler A, Caplin N, Zuijderduijn L, Zolesi V, Balsamo M, Mariani A, Pellari SS, Carubia F, Luciani G, Leys N, Doswald-Winkler J, Herova M, Wadsworth J, Everroad RC, Rattenbacher B, Demets R, Cockell CS.	Front Microbiol	10.3389/fmicb.2020.579156	2020
Pathogenicity	2-Hydroxysorangiadenosine: Structure and Biosynthesis of a Myxobacterial Sesquiterpene-Nucleoside.	Okoth DA, Hug JJ, Garcia R, Sproer C, Overmann J, Muller R.	Molecules	10.3390/molecules25112676	2020
Enzymology	Purification and characterization of a novel, highly potent fibrinolytic enzyme from Bacillus subtilis DC27 screened from Douchi, a traditional Chinese fermented soybean food.	Hu Y, Yu D, Wang Z, Hou J, Tyagi R, Liang Y, Hu Y.	Sci Rep	10.1038/s41598-019-45686-y	2019
	Cloning and characterization of low-temperature adapted GH5-CBM3 endo-cellulase from Bacillus subtilis 1AJ3 and their application in the saccharification of switchgrass and coffee grounds.	Ma L, Aizhan R, Wang X, Yi Y, Shan Y, Liu B, Zhou Y, Lu X.	AMB Express	10.1186/s13568-020-00975-y	2020
	New Insights on Biological Activities, Chemical Compositions, and Classifications of Marine Actinomycetes Antifouling Agents.	Morgan RN, Ali AA, Alshahrani MY, Alshahrani MY, Alshahrani MY, Aboshanab KM.	Microorganisms	10.3390/microorganisms11102444	2023
	Boosting isoprene production via heterologous expression of the Kudzu isoprene synthase gene (kIspS) into Bacillus spp. cell factory.	Gomaa L, Loscar ME, Zein HS, Abdel-Ghaffar N, Abdelhadi AA, Abdelaal AS, Abdallah NA.	AMB Express	10.1186/s13568-017-0461-7	2017
	Acetylenic Replacement of Albicidin's Methacrylamide Residue Circumvents Detrimental E/Z Photoisomerization and Preserves Antibacterial Activity.	Behroz I, Kleebauer L, Hommernick K, Seidel M, Gratz S, Mainz A, Weston JB, Sussmuth RD.	Chemistry	10.1002/chem.202100523	2021
Pathogenicity	Ecological and Pharmacological Activities of Polybrominated Diphenyl Ethers (PBDEs) from the Indonesian Marine Sponge Lamellodysidea herbacea.	Faisal MR, Kellermann MY, Rohde S, Putra MY, Murniasih T, Risdian C, Mohr KI, Wink J, Praditya DF, Steinmann E, Kock M, Schupp PJ.	Mar Drugs	10.3390/md19110611	2021
Phylogeny	Bacillus Classification Based on Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry-Effects of Culture Conditions.	Shu LJ, Yang YL.	Sci Rep	10.1038/s41598-017-15808-5	2017
	Comparison of five bacterial strains producing siderophores with ability to chelate iron under alkaline conditions.	Ferreira CMH, Vilas-Boas A, Sousa CA, Soares HMVM, Soares EV.	AMB Express	10.1186/s13568-019-0796-3	2019
Metabolism	Evaluation of different Bacillus strains in respect of their ability to produce Surfactin in a model fermentation process with integrated foam fractionation.	Willenbacher J, Zwick M, Mohr T, Schmid F, Syldatk C, Hausmann R.	Appl Microbiol Biotechnol	10.1007/s00253-014-6010-2	2014
	Neurite Outgrowth-Inducing Drimane-Type Sesquiterpenoids Isolated from Cultures of the Polypore Abundisporus violaceus MUCL 56355.	Sum WC, Ebada SS, Kirchenwitz M, Wanga L, Decock C, Stradal TEB, Matasyoh JC, Mandi A, Kurtan T, Stadler M.	J Nat Prod	10.1021/acs.jnatprod.3c00525	2023
	Microbially-Enhanced Vanadium Mining and Bioremediation Under Micro- and Mars Gravity on the International Space Station.	Cockell CS, Santomartino R, Finster K, Waajen AC, Nicholson N, Loudon CM, Eades LJ, Moeller R, Rettberg P, Fuchs FM, Van Houdt R, Leys N, Coninx I, Hatton J, Parmitano L, Krause J, Koehler A, Caplin N, Zuijderduijn L, Mariani A, Pellari S, Carubia F, Luciani G, Balsamo M, Zolesi V, Ochoa J, Sen P, Watt JAJ, Doswald-Winkler J, Herova M, Rattenbacher B, Wadsworth J, Everroad RC, Demets R.	Front Microbiol	10.3389/fmicb.2021.641387	2021
	Lettuce (Lactuca sativa L.) Cultures and the Bioactivity of Their Root Microflora Are Affected by Amended Soil.	Mitsigiorgi K, Ntroumpogianni GC, Katsifas EA, Hatzinikolaou DG, Chassapis K, Skampa E, Stefi AL, Christodoulakis NS.	Plants (Basel)	10.3390/plants13131872	2024
	Extracts of Talaromyces purpureogenus Strains from Apis mellifera Bee Bread Inhibit the Growth of Paenibacillus spp. In Vitro.	Vocadlova K, Luddecke T, Patras MA, Marner M, Hartwig C, Benes K, Matha V, Mraz P, Schaberle TF, Vilcinskas A.	Microorganisms	10.3390/microorganisms11082067	2023
	Bioactive Angucyclines/Angucyclinones Discovered from 1965 to 2023.	Liu HS, Chen HR, Huang SS, Li ZH, Wang CY, Zhang H.	Mar Drugs	10.3390/md23010025	2025
Metabolism	Polyketide-Derived Secondary Metabolites from a Dothideomycetes Fungus, Pseudopalawania siamensisgen. et sp. nov., (Muyocopronales) with Antimicrobial and Cytotoxic Activities.	Mapook A, Macabeo APG, Thongbai B, Hyde KD, Stadler M.	Biomolecules	10.3390/biom10040569	2020
	Antimicrobial and Cytotoxic Cyathane-Xylosides from Cultures of the Basidiomycete Dentipellis fragilis.	Sum WC, Mitschke N, Schrey H, Wittstein K, Kellner H, Stadler M, Matasyoh JC.	Antibiotics (Basel)	10.3390/antibiotics11081072	2022
	A type III polyketide synthase cluster in the phylum Planctomycetota is involved in alkylresorcinol biosynthesis.	Milke L, Kabuu M, Zschoche R, Gatgens J, Krumbach K, Carlstedt KL, Wurzbacher CE, Balluff S, Beemelmanns C, Jogler C, Marienhagen J, Kallscheuer N.	Appl Microbiol Biotechnol	10.1007/s00253-024-13065-x	2024
	Evaluation of the Efficacy of Two New Biotechnological-Based Freeze-Dried Fertilizers for Sustainable Fe Deficiency Correction of Soybean Plants Grown in Calcareous Soils.	Ferreira CMH, Lopez-Rayo S, Lucena JJ, Soares EV, Soares HMVM.	Front Plant Sci	10.3389/fpls.2019.01335	2019
Genetics	Analysis of Endophytic Bacterial Diversity From Different Dendrobium Stems and Discovery of an Endophyte Produced Dendrobine-Type Sesquiterpenoid Alkaloids.	Wang SS, Liu JM, Sun J, Huang YT, Jin N, Li MM, Liang YT, Fan B, Wang FZ.	Front Microbiol	10.3389/fmicb.2021.775665	2021
	Morinagadepsin, a Depsipeptide from the Fungus Morinagamyces vermicularis gen. et comb. nov.	Harms K, Surup F, Stadler M, Stchigel AM, Marin-Felix Y.	Microorganisms	10.3390/microorganisms9061191	2021
Metabolism	Selection of sponge-associated bacteria with high potential for the production of antibacterial compounds.	Riyanti, Balansa W, Liu Y, Sharma A, Mihajlovic S, Hartwig C, Leis B, Rieuwpassa FJ, Ijong FG, Wagele H, Konig GM, Schaberle TF.	Sci Rep	10.1038/s41598-020-76256-2	2020
	Methodological steps forward in toxicological in vitro screening of mineral wools in primary rat alveolar macrophages and normal rat mesothelial NRM2 cells.	Ziemann C, Schulz F, Koch C, Solvang M, Bitsch A.	Arch Toxicol	10.1007/s00204-024-03855-7	2024
Metabolism	Daqu Fermentation Selects for Heat-Resistant Enterobacteriaceae and Bacilli.	Wang Z, Li P, Luo L, Simpson DJ, Ganzle MG.	Appl Environ Microbiol	10.1128/aem.01483-18	2018
Metabolism	Space station biomining experiment demonstrates rare earth element extraction in microgravity and Mars gravity.	Cockell CS, Santomartino R, Finster K, Waajen AC, Eades LJ, Moeller R, Rettberg P, Fuchs FM, Van Houdt R, Leys N, Coninx I, Hatton J, Parmitano L, Krause J, Koehler A, Caplin N, Zuijderduijn L, Mariani A, Pellari SS, Carubia F, Luciani G, Balsamo M, Zolesi V, Nicholson N, Loudon CM, Doswald-Winkler J, Herova M, Rattenbacher B, Wadsworth J, Craig Everroad R, Demets R.	Nat Commun	10.1038/s41467-020-19276-w	2020
	N-Acylated amino acid methyl esters from marine Roseobacter group bacteria.	Bruns H, Ziesche L, Taniwal NK, Wolter L, Brinkhoff T, Herrmann J, Muller R, Schulz S.	Beilstein J Org Chem	10.3762/bjoc.14.276	2018
Phylogeny	Bacterial selection for biological control of plant disease: criterion determination and validation.	Mota MS, Gomes CB, Souza Junior IT, Moura AB.	Braz J Microbiol	10.1016/j.bjm.2016.09.003	2017
Pathogenicity	COX Inhibitory and Cytotoxic Naphthoketal-Bearing Polyketides from Sparticola junci.	Garcia KYM, Quimque MTJ, Primahana G, Ratzenbock A, Cano MJB, Llaguno JFA, Dahse HM, Phukhamsakda C, Surup F, Stadler M, Macabeo APG.	Int J Mol Sci	10.3390/ijms222212379	2021
Genetics	Characterization of the Genome Feature and Toxic Capacity of a Bacillus wiedmannii Isolate From the Hydrothermal Field in Okinawa Trough.	Zhao Y, Chen C, Gu HJ, Zhang J, Sun L.	Front Cell Infect Microbiol	10.3389/fcimb.2019.00370	2019
	Three New Stigmatellin Derivatives Reveal Biosynthetic Insights of Its Side Chain Decoration.	Okoth DA, Hug JJ, Garcia R, Muller R.	Molecules	10.3390/molecules27144656	2022
	Six Heterocyclic Metabolites from the Myxobacterium Labilithrix luteola.	Mulwa LS, Jansen R, Praditya DF, Praditya DF, Mohr KI, Wink J, Steinmann E, Stadler M.	Molecules	10.3390/molecules23030542	2018
Phylogeny	Streptomyces globosus DK15 and Streptomyces ederensis ST13 as new producers of factumycin and tetrangomycin antibiotics.	Charousova I, Medo J, Hleba L, Javorekova S.	Braz J Microbiol	10.1016/j.bjm.2017.12.007	2018
	Building trans-bicyclo[4.4.0]decanes/decenes in complex multifunctional frameworks: the case for antibiotic development.	Zhang W, Kaplan AR, Davison EK, Freeman JL, Brimble MA, Wuest WM.	Nat Prod Rep	10.1039/d0np00052c	2021
Metabolism	Furanones and Anthranilic Acid Derivatives from the Endophytic Fungus Dendrothyrium variisporum.	Teponno RB, Noumeur SR, Helaly SE, Huttel S, Harzallah D, Stadler M.	Molecules	10.3390/molecules22101674	2017
	Emergence of ion-channel-mediated electrical oscillations in Escherichia coli biofilms.	Akabuogu E, Carneiro da Cunha Martorelli V, Krasovec R, Roberts IS, Waigh TA.	Elife	10.7554/elife.92525	2025
	Characterization of strain-specific Bacillus cereus swimming motility and flagella by means of specific antibodies.	Schwenk V, Dietrich R, Klingl A, Martlbauer E, Jessberger N.	PLoS One	10.1371/journal.pone.0265425	2022
Pathogenicity	Recombinant AfusinC, an anionic fungal CSalphabeta defensin from Aspergillus fumigatus, exhibits antimicrobial activity against gram-positive bacteria.	Contreras G, Braun MS, Schafer H, Wink M.	PLoS One	10.1371/journal.pone.0205509	2018
	Isolation and characterization of a Bacillus subtilis strain that degrades endosulfan and endosulfan sulfate.	Kumar A, Bhoot N, Soni I, John PJ.	3 Biotech	10.1007/s13205-013-0176-7	2014
Genetics	Genomic and Chemical Decryption of the Bacteroidetes Phylum for Its Potential to Biosynthesize Natural Products.	Brinkmann S, Kurz M, Patras MA, Hartwig C, Marner M, Leis B, Billion A, Kleiner Y, Bauer A, Toti L, Poverlein C, Hammann PE, Vilcinskas A, Glaeser J, Spohn M, Schaberle TF.	Microbiol Spectr	10.1128/spectrum.02479-21	2022
Enzymology	Production of Xanthanases by Paenibacillus spp.: Complete Xanthan Degradation and Possible Applications.	Ashraf S, Soudi MR, Ghadam P.	Iran J Biotechnol	10.15171/ijb.1477	2017
Enzymology	Biotechnological Potential of Bacteria Isolated from the Sea Cucumber Holothuria leucospilota and Stichopus vastus from Lampung, Indonesia.	Wibowo JT, Kellermann MY, Versluis D, Putra MY, Murniasih T, Mohr KI, Wink J, Engelmann M, Praditya DF, Steinmann E, Schupp PJ.	Mar Drugs	10.3390/md17110635	2019
	Replacement of l-Amino Acids by d-Amino Acids in the Antimicrobial Peptide Ranalexin and Its Consequences for Antimicrobial Activity and Biodistribution.	Domhan C, Uhl P, Kleist C, Zimmermann S, Umstatter F, Leotta K, Mier W, Wink M.	Molecules	10.3390/molecules24162987	2019
Enzymology	Exploring ComQXPA quorum-sensing diversity and biocontrol potential of Bacillus spp. isolates from tomato rhizoplane.	Oslizlo A, Stefanic P, Vatovec S, Beigot Glaser S, Rupnik M, Mandic-Mulec I.	Microb Biotechnol	10.1111/1751-7915.12258	2015
	Antibiotic profiling of wild-type bacilli led to the discovery of new lanthipeptide subtilin-producing Bacillus spizizenii strains whose 16S rDNA sequences differ from the B. spizizenii typing strain.	Helfrich M, Entian KD, Stein T.	Int Microbiol	10.1007/s10123-022-00266-5	2022
Phylogeny	Phylogenetic Profiling and Diversity of Bacterial Communities in the Death Valley, an Extreme Habitat in the Atacama Desert.	Piubeli F, de Lourdes Moreno M, Kishi LT, Henrique-Silva F, Garcia MT, Mellado E.	Indian J Microbiol	10.1007/s12088-015-0539-3	2015
	Sporothriolide derivatives as chemotaxonomic markers for Hypoxylon monticulosum.	Surup F, Kuhnert E, Lehmann E, Heitkamper S, Hyde KD, Fournier J, Stadler M.	Mycology	10.1080/21501203.2014.929600	2014
Metabolism	Response of the wood-decay fungus Schizophyllum commune to co-occurring microorganisms.	Krause K, Jung EM, Lindner J, Hardiman I, Poetschner J, Madhavan S, Matthaus C, Kai M, Menezes RC, Popp J, Svatos A, Kothe E.	PLoS One	10.1371/journal.pone.0232145	2020
Metabolism	A secreted antibacterial neuropeptide shapes the microbiome of Hydra.	Augustin R, Schroder K, Murillo Rincon AP, Fraune S, Anton-Erxleben F, Herbst EM, Wittlieb J, Schwentner M, Grotzinger J, Wassenaar TM, Bosch TCG.	Nat Commun	10.1038/s41467-017-00625-1	2017
	In vitro and in vivo evidences for innate immune stimulators lactic acid bacterial starters isolated from fermented camel dairy products.	Elbanna K, El Hadad S, Assaeedi A, Aldahlawi A, Khider M, Alhebshi A.	Sci Rep	10.1038/s41598-018-31006-3	2018
Metabolism	Phosphonates enantiomers receiving with fungal enzymatic systems.	Serafin-Lewanczuk M, Brzezinska-Rodak M, Lubiak-Kozlowska K, Majewska P, Klimek-Ochab M, Olszewski TK, Zymanczyk-Duda E.	Microb Cell Fact	10.1186/s12934-021-01573-8	2021
	Biotechnological screening of microalgal and cyanobacterial strains for biogas production and antibacterial and antifungal effects.	Mudimu O, Rybalka N, Bauersachs T, Born J, Friedl T, Schulz R.	Metabolites	10.3390/metabo4020373	2014
	Discovery, Biosynthesis and Biological Activity of a Succinylated Myxochelin from the Myxobacterial Strain MSr12020.	Okoth DA, Hug JJ, Garcia R, Muller R.	Microorganisms	10.3390/microorganisms10101959	2022
	Cold adaptation of tRNA nucleotidyltransferases: A tradeoff in activity, stability and fidelity.	Ernst FGM, Erber L, Sammler J, Juhling F, Betat H, Morl M.	RNA Biol	10.1080/15476286.2017.1391445	2018
Metabolism	Simultaneous heterotrophic nitrification and aerobic denitrification by Chryseobacterium sp. R31 isolated from abattoir wastewater.	Kundu P, Pramanik A, Dasgupta A, Mukherjee S, Mukherjee J.	Biomed Res Int	10.1155/2014/436056	2014
	Antibacterial and Antifungal Sesquiterpenoids: Chemistry, Resource, and Activity.	Li HY, Yang WQ, Zhou XZ, Shao F, Shen T, Guan HY, Zheng J, Zhang LM.	Biomolecules	10.3390/biom12091271	2022
	Isolation and characterization of phosphate solubilizing bacteria naturally colonizing legumes rhizosphere in Morocco.	Janati W, Mikou K, El Ghadraoui L, Errachidi F.	Front Microbiol	10.3389/fmicb.2022.958300	2022
	Discovery and overproduction of novel highly bioactive pamamycins through transcriptional engineering of the biosynthetic gene cluster.	Eckert N, Rebets Y, Horbal L, Zapp J, Herrmann J, Busche T, Muller R, Kalinowski J, Luzhetskyy A.	Microb Cell Fact	10.1186/s12934-023-02231-x	2023
Phylogeny	Characterization of the first highly predatory Bdellovibrio bacteriovorus from Iran and its potential lytic activity against principal pathogenic Enterobacteriaceae.	Odooli S, Roghanian R, Emtiazi G, Mohkam M, Ghasemi Y.	Iran J Basic Med Sci	10.22038/ijbms.2020.43159.10146	2020
Enzymology	Influence of Substrate Concentration on the Culturability of Heterotrophic Soil Microbes Isolated by High-Throughput Dilution-to-Extinction Cultivation.	Bartelme RP, Custer JM, Dupont CL, Espinoza JL, Torralba M, Khalili B, Carini P.	mSphere	10.1128/msphere.00024-20	2020
	Volatiles from the tropical ascomycete Daldinia clavata (Hypoxylaceae, Xylariales).	Wang T, Mohr KI, Stadler M, Dickschat JS.	Beilstein J Org Chem	10.3762/bjoc.14.9	2018
	Antibiotic-Producing Beneficial Bacteria in the Gut of the Burying Beetle Nicrophorus vespilloides.	Heise P, Liu Y, Degenkolb T, Vogel H, Schaberle TF, Vilcinskas A.	Front Microbiol	10.3389/fmicb.2019.01178	2019
	The Ubiquitous Soil Terpene Geosmin Acts as a Warning Chemical.	Zaroubi L, Ozugergin I, Mastronardi K, Imfeld A, Law C, Gelinas Y, Piekny A, Findlay BL.	Appl Environ Microbiol	10.1128/aem.00093-22	2022
	Genotyping and toxigenic potential of Bacillus subtilis and Bacillus pumilus strains occurring in industrial and artisanal cured sausages.	Matarante A, Baruzzi F, Cocconcelli PS, Morea M.	Appl Environ Microbiol	10.1128/aem.70.9.5168-5176.2004	2004
	A Multicolor Fluorescence in situ Hybridization Approach Using an Extended Set of Fluorophores to Visualize Microorganisms.	Lukumbuzya M, Schmid M, Pjevac P, Daims H.	Front Microbiol	10.3389/fmicb.2019.01383	2019
	Regioselective Enzymatic beta-Carboxylation of para-Hydroxy- styrene Derivatives Catalyzed by Phenolic Acid Decarboxylases.	Wuensch C, Pavkov-Keller T, Steinkellner G, Gross J, Fuchs M, Hromic A, Lyskowski A, Fauland K, Gruber K, Glueck SM, Faber K.	Adv Synth Catal	10.1002/adsc.201401028	2015
	Lanyamycin, a macrolide antibiotic from Sorangium cellulosum, strain Soce 481 (Myxobacteria).	Mulwa LS, Jansen R, Praditya DF, Mohr KI, Okanya PW, Wink J, Steinmann E, Stadler M.	Beilstein J Org Chem	10.3762/bjoc.14.132	2018
Metabolism	Isolation and characterization of environmental bacteria capable of extracellular biosorption of mercury.	Francois F, Lombard C, Guigner JM, Soreau P, Brian-Jaisson F, Martino G, Vandervennet M, Garcia D, Molinier AL, Pignol D, Peduzzi J, Zirah S, Rebuffat S.	Appl Environ Microbiol	10.1128/aem.06522-11	2012
	Two more pieces of the colibactin genotoxin puzzle from Escherichia coli show incorporation of an unusual 1-aminocyclopropanecarboxylic acid moiety.	Bian X, Plaza A, Zhang Y, Muller R.	Chem Sci	10.1039/c5sc00101c	2015
	Developing Techniques for the Utilization of Planctomycetes As Producers of Bioactive Molecules.	Jeske O, Surup F, Ketteniss M, Rast P, Forster B, Jogler M, Wink J, Jogler C.	Front Microbiol	10.3389/fmicb.2016.01242	2016
Metabolism	Antimicrobial susceptibility of Bacillus strains isolated from primary starters for African traditional bread production and characterization of the bacitracin operon and bacitracin biosynthesis.	Adimpong DB, Sorensen KI, Thorsen L, Stuer-Lauridsen B, Abdelgadir WS, Nielsen DS, Derkx PM, Jespersen L.	Appl Environ Microbiol	10.1128/aem.00730-12	2012
Metabolism	Production of fungal and bacterial growth modulating secondary metabolites is widespread among mycorrhiza-associated streptomycetes.	Schrey SD, Erkenbrack E, Fruh E, Fengler S, Hommel K, Horlacher N, Schulz D, Ecke M, Kulik A, Fiedler HP, Hampp R, Tarkka MT.	BMC Microbiol	10.1186/1471-2180-12-164	2012
	Identification of Rosellinia species as producers of cyclodepsipeptide PF1022 A and resurrection of the genus Dematophora as inferred from polythetic taxonomy.	Wittstein K, Cordsmeier A, Lambert C, Wendt L, Sir EB, Weber J, Wurzler N, Petrini LE, Stadler M.	Stud Mycol	10.1016/j.simyco.2020.01.001	2020
	Antimicrobial and enzymatic activity of actinomycetes isolated from soils of coastal islands.	Charousova I, Medo J, Halenarova E, Javorekova S.	J Adv Pharm Technol Res	10.4103/japtr.japtr_161_16	2017
Phenotype	Screening and Purification of Natural Products from Actinomycetes that Induce a "Rounded" Morphological Phenotype in Fission Yeast.	Lewis RA, Devi J, Green K, Li J, Hopkins A, Hayles J, Nurse P, Errington J, Allenby NEE.	Nat Prod Bioprospect	10.1007/s13659-021-00304-1	2021
	Root Nodule Rhizobia From Undomesticated Shrubs of the Dry Woodlands of Southern Africa Can Nodulate Angolan Teak Pterocarpus angolensis, an Important Source of Timber.	Bunger W, Sarkar A, Gronemeyer JL, Zielinski J, Revermann R, Hurek T, Reinhold-Hurek B.	Front Microbiol	10.3389/fmicb.2021.611704	2021
Enzymology	Identification and Functional Characterization of a Novel Insecticidal Decapeptide from the Myrmicine Ant Manica rubida.	Heep J, Skaljac M, Grotmann J, Kessel T, Seip M, Schmidtberg H, Vilcinskas A.	Toxins (Basel)	10.3390/toxins11100562	2019
Enzymology	Comprehensive Laboratory Evaluation of a Highly Specific Lateral Flow Assay for the Presumptive Identification of Bacillus anthracis Spores in Suspicious White Powders and Environmental Samples.	Ramage JG, Prentice KW, DePalma L, Venkateswaran KS, Chivukula S, Chapman C, Bell M, Datta S, Singh A, Hoffmaster A, Sarwar J, Parameswaran N, Joshi M, Thirunavkkarasu N, Krishnan V, Morse S, Avila JR, Sharma S, Estacio PL, Stanker L, Hodge DR, Pillai SP.	Health Secur	10.1089/hs.2016.0041	2016
	Chemical basis of the synergism and antagonism in microbial communities in the nests of leaf-cutting ants.	Schoenian I, Spiteller M, Ghaste M, Wirth R, Herz H, Spiteller D.	Proc Natl Acad Sci U S A	10.1073/pnas.1008441108	2011
	Double labeling of oligonucleotide probes for fluorescence in situ hybridization (DOPE-FISH) improves signal intensity and increases rRNA accessibility.	Stoecker K, Dorninger C, Daims H, Wagner M.	Appl Environ Microbiol	10.1128/aem.02456-09	2010
	DNA polymorphisms and biocontrol of Bacillus antagonistic to citrus bacterial canker with indication of the interference of phyllosphere biofilms.	Huang TP, Tzeng DD, Wong AC, Chen CH, Lu KM, Lee YH, Huang WD, Hwang BF, Tzeng KC.	PLoS One	10.1371/journal.pone.0042124	2012
Phylogeny	Chemotaxonomic identification of single bacteria by micro-Raman spectroscopy: application to clean-room-relevant biological contaminations.	Rosch P, Harz M, Schmitt M, Peschke KD, Ronneberger O, Burkhardt H, Motzkus HW, Lankers M, Hofer S, Thiele H, Popp J.	Appl Environ Microbiol	10.1128/aem.71.3.1626-1637.2005	2005
	Three Novel Species with Peptidoglycan Cell Walls form the New Genus Lacunisphaera gen. nov. in the Family Opitutaceae of the Verrucomicrobial Subdivision 4.	Rast P, Glockner I, Boedeker C, Jeske O, Wiegand S, Reinhardt R, Schumann P, Rohde M, Spring S, Glockner FO, Jogler C, Jogler M.	Front Microbiol	10.3389/fmicb.2017.00202	2017
Phylogeny	Application of denaturing high-performance liquid chromatography in microbial ecology: fermentor sludge, compost, and soil community profiling.	Wagner AO, Malin C, Illmer P.	Appl Environ Microbiol	10.1128/aem.01411-08	2009
	Evolution of tRNA nucleotidyltransferases: a small deletion generated CC-adding enzymes.	Neuenfeldt A, Just A, Betat H, Morl M.	Proc Natl Acad Sci U S A	10.1073/pnas.0801971105	2008
Enzymology	Chromosome-Directed PCR-Based Detection and Quantification of Bacillus cereus Group Members with Focus on B. thuringiensis Serovar israelensis Active against Nematoceran Larvae.	Schneider S, Hendriksen NB, Melin P, Lundstrom JO, Sundh I.	Appl Environ Microbiol	10.1128/aem.00671-15	2015
	Advancements in antimicrobial nanoscale materials and self-assembling systems.	Doolan JA, Williams GT, Hilton KLF, Chaudhari R, Fossey JS, Goult BT, Hiscock JR.	Chem Soc Rev	10.1039/d1cs00915j	2022
Metabolism	Antibiotic production by a Roseobacter clade-affiliated species from the German Wadden Sea and its antagonistic effects on indigenous isolates.	Brinkhoff T, Bach G, Heidorn T, Liang L, Schlingloff A, Simon M.	Appl Environ Microbiol	10.1128/aem.70.4.2560-2565.2003	2004
	PCR-based preparation of 23S rRNA-targeted group-specific polynucleotide probes.	Ludwig W, Dorn S, Springer N, Kirchhof G, Schleifer KH.	Appl Environ Microbiol	10.1128/aem.60.9.3236-3244.1994	1994
Phylogeny	High-resolution differentiation of Cyanobacteria by using rRNA-internal transcribed spacer denaturing gradient gel electrophoresis.	Janse I, Meima M, Kardinaal WE, Zwart G.	Appl Environ Microbiol	10.1128/aem.69.11.6634-6643.2003	2003
Enzymology	Identification of individual prokaryotic cells by using enzyme-labeled, rRNA-targeted oligonucleotide probes.	Amann RI, Zarda B, Stahl DA, Schleifer KH.	Appl Environ Microbiol	10.1128/aem.58.9.3007-3011.1992	1992
	Application of antisera raised against sulfate-reducing bacteria for indirect immunofluorescent detection of immunoreactive bacteria in sediment from the German Baltic Sea.	Lillebaek R.	Appl Environ Microbiol	10.1128/aem.61.9.3436-3442.1995	1995
Phylogeny	Quantification of 16S rRNAs in complex bacterial communities by multiple competitive reverse transcription-PCR in temperature gradient gel electrophoresis fingerprints.	Felske A, Akkermans AD, De Vos WM.	Appl Environ Microbiol	10.1128/aem.64.11.4581-4587.1998	1998
Metabolism	Degradative capacities and 16S rRNA-targeted whole-cell hybridization of sulfate-reducing bacteria in an anaerobic enrichment culture utilizing alkylbenzenes from crude oil.	Rabus R, Fukui M, Wilkes H, Widdle F.	Appl Environ Microbiol	10.1128/aem.62.10.3605-3613.1996	1996
	Functional Evaluation of Bacillus subtilis DCP04 from Korean Fermented Soybean Paste: A Potential Probiotic Strain for Polyethylene Degradation and Adsorption.	Kim GH, Jeong H, Jung I, Choi M, Kim JH.	Foods	10.3390/foods14193328	2025
	Effects of extreme acceleration, microgravity, and deceleration on Bacillus subtilis onboard a suborbital space flight.	Yang E, Dhanaraj JJ, Tharushi Perera PG, Vilagosh Z, Iles GN, Kramer S, Florin G, Linklater DP, Nguyen THP, Dekiwadia C, Juodkazis S, Croft RJ, Ivanova EP.	NPJ Microgravity	10.1038/s41526-025-00526-4	2025
	Exploring the Substrate Flexibility of GrsB Thioesterase Leads to the Structural Reassignment of a Gramicidin S Variant.	Konno S, Mizuguchi T, Suzuki A, Tanaka M, Ishikawa F, Taguchi A, Taniguchi A, Tanabe G, Hayashi Y.	Chembiochem	10.1002/cbic.202500412	2025
Genetics	Complete Genome Sequence and In Vitro Probiotic Assessment of Bacillus subtilis DC-11 Isolated from Traditionally Fermented Idli Batter.	Chaudhari DN, Ahire JJ, Kulthe AA, Ghodke S.	Curr Microbiol	10.1007/s00284-024-04014-y	2024
	Optimization and characterization studies of poultry waste valorization for peptone production using a newly Egyptian Bacillus subtilis strain.	Saeed H, Ragaey A, Samy Z, Ashraf V, ElMostafa A, Ahmad N, Bebawy E, Sorour NEM, El-Sayed SM, Bakry A, Ebeed N, Elhariry H, El-Noby T, Abu-Hussien SH.	AMB Express	10.1186/s13568-024-01794-1	2025
	Antibiotic production by soil bacteria under aerobic and micro-oxic conditions.	Paaaina-Daquioag C, Kumar DBM, Kerr DR, Romero L, Regner KM.	MicroPubl Biol	10.17912/micropub.biology.001440	2025
	Complete genome sequence data describing the biosynthetic potential of kanosamine and bacilysin in Bacillus subtilis AMFE023/7 from Thai fermented fish (Pla Ra).	Yasawong M, Songngamsuk T, Phatcharaharikarn M, Santaweesuk P, Wongchitrat P, Palittapongarnpim P, Boonyanugomol W, Thong-On A, Kaewbutra S, Rukseree K.	Data Brief	10.1016/j.dib.2025.111860	2025
	Innovative approaches for amino acid production via consolidated bioprocessing of agricultural biomass.	Chu PH, Jenol MA, Phang LY, Ibrahim MF, Purkan P, Hadi S, Abd-Aziz S.	Environ Sci Pollut Res Int	10.1007/s11356-024-33534-0	2024
	Molecular basis for the increased activity of ZMS-2 serine protease in the presence of metal ions and hydrogen peroxide.	Khan Z, Tanoeyadi S, Jabeen N, Shafique M, Naz SA, Mahmud T.	J Inorg Biochem	10.1016/j.jinorgbio.2024.112566	2024
	Electrofermentation increases concentration of poly gamma-glutamic acid in Bacillus subtilis biofilms.	Adilkhanova A, Ormantayeva A, Kaziullayeva A, Olaifa K, Eghtesadi N, Abbas AH, Calvio C, Pham TT, Ajunwa OM, Marsili E.	Microb Biotechnol	10.1111/1751-7915.14426	2024
	Bacillus subtilis SOM8 isolated from sesame oil meal for potential probiotic application in inhibiting human enteropathogens.	Zhao Z, Li W, Tran TT, Loo SCJ.	BMC Microbiol	10.1186/s12866-024-03263-y	2024
	A critical assessment of microbial-based antimicrobial sanitizing of inanimate surfaces in healthcare settings.	Fijan S, Kurti P, Rozman U, Sostar Turk S.	Front Microbiol	10.3389/fmicb.2024.1412269	2024
	Unlocking the antioxidant and antibacterial potential of exopolysaccharides produced by endophytic fungi (Aspergillus fumigatus and Preussia isabellae) isolated from Tanzania's mangroves.	Nyaisaba BM, Masalu RJ, Myovela H, Mpinda CB.	BMC Biotechnol	10.1186/s12896-025-01005-0	2025
	Limits of antibacterial activity of triangular silver nanoplates and photothermal enhancement thereof for Bacillus subtilis.	Kaur S, Dadwal R, Nandanwar H, Soni S.	J Photochem Photobiol B	10.1016/j.jphotobiol.2023.112787	2023
	PA-Win2: In Silico-Based Discovery of a Novel Peptide with Dual Antibacterial and Anti-Biofilm Activity.	Oh JW, Shin MK, Park HR, Kim S, Lee B, Yoo JS, Chi WJ, Sung JS.	Antibiotics (Basel)	10.3390/antibiotics13121113	2024
Biotechnology	Engineering Bacillus subtilis for high-value bioproduction: recent advances and applications	Liu Z, Yu X.	Microb Cell Fact		2025
	Vancomycin-Teixobactin Conjugates.	Padilla MSTL, Nowick JS.	J Am Chem Soc	10.1021/jacs.4c17175	2025
	Diverse chemotypes of polyketides as promising antimicrobial agents: latest progress.	Kumar G, Chopra S.	RSC Adv	10.1039/d5ra03414k	2025
Enzymology	A promiscuous Bcd amino acid dehydrogenase promotes biofilm development in Bacillus subtilis.	Ranava D, Lander SM, Kuan SY, Winkelman JD, Prindle A, Yap MF.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00750-6	2025
Enzymology	Development of a DC-Biased AC-Stimulated Microfluidic Device for the Electrokinetic Separation of Bacterial and Yeast Cells.	Nasir Ahamed NN, Mendiola-Escobedo CA, Perez-Gonzalez VH, Lapizco-Encinas BH.	Biosensors (Basel)	10.3390/bios14050237	2024
	Enhanced Aerosol Containment Performance of a Negative Pressure Hood with an Aerodynamic Cap Design: Multi-Method Validation Using CFD, PAO Particles, and Microbial Testing.	Ko S, Sung K, Oh MJ, Kim Y, Kim MJ, Lee JW, Park YS, Kim YH, Hong JY, Lee JS.	Bioengineering (Basel)	10.3390/bioengineering12060624	2025
	Design, synthesis, biological evaluation, and computational insights of 2-(Aryl)benzo[d]imidazo[2,1-b]thiazole-7-sulfonamide derivatives as potent antitubercular and antibacterial agents.	Deshmukh HS, Adole VA, Mali SN, Jagdale BS.	BMC Chem	10.1186/s13065-025-01405-5	2025
	Teixobactin "Swapmers" with l Tail Stereochemistry Retain Antibiotic Activity.	Griffin JH, Mendoza AT, Nowick JS.	J Org Chem	10.1021/acs.joc.4c01674	2024
	Five tree species contained antibiotic-producing bacteria within their bark.	Hoffman C, Blanke K.	MicroPubl Biol	10.17912/micropub.biology.001227	2024
	Multidimensional analysis of honey from Eastern Anatolia (Kars): Pollen spectrum, physicochemical properties, and antimicrobial activity.	Akpinar S, Mutlu N.	PLoS One	10.1371/journal.pone.0327861	2025
	Ultrasound assisted extraction and liposome encapsulation of olive leaves and orange peels: How to transform biomass waste into valuable resources with antimicrobial activity.	Prevete G, Carvalho LG, Del Carmen Razola-Diaz M, Verardo V, Mancini G, Fiore A, Mazzonna M.	Ultrason Sonochem	10.1016/j.ultsonch.2024.106765	2024
Enzymology	Freezing of Vaginal Swabs Prior to DNA Purification Does Not Statistically Significantly Affect Microbiome Composition	Ghathian K, Heintz J, Mollerup S, Paulsen S, Krogfelt K, Frimodt-Moller N, Hansen K, Halkjaer S, Holm A, Pinholt M, Petersen A.	Microbiologyopen		2025
	Rapid antimicrobial susceptibility testing using carbon screen printed electrodes in a microfluidic device.	Gopalakrishnan S, Mall D, Pushpavanam S, Karmakar R.	Sci Rep	10.1038/s41598-024-84286-3	2025
	Identifying Antimicrobial Agents from Chlorella sorokiniana: A Biotechnological Approach Utilizing Eco-Friendly Extraction and Characterization Methods.	Lio E, Dramis M, Ottolina G, Secundo F.	BioTech (Basel)	10.3390/biotech14010022	2025
	The Potential of Fermentation-Based Processing on Protein Modification: A Review.	Yousefi N, Shokrollahi Yancheshmeh B, Gernaey KV.	Foods	10.3390/foods14203461	2025
	Theoretical and Anti-Klebsiella pneumoniae Evaluations of Substituted 2,7-dimethylimidazo[1,2-a]pyridine-3-carboxamide and Imidazopyridine Hydrazide Derivatives.	Mali SN, Anand A, Zaki MEA, Al-Hussain SA, Jawarkar RD, Pandey A, Kuznetsov A.	Molecules	10.3390/molecules28062801	2023
	LC-DAD-MSⁿ and HR-LC-QTOF Analysis of Ziziphus budhensis Leaves and Evaluation of Their In Vitro and In Vivo Biological Activities.	Bharati S, Maharjan B, Shrestha T, Shrestha SS, Sut S, Devkota HP, Shrestha RLS, Dall'Acqua S.	Chem Biodivers	10.1002/cbdv.202402835	2025
	Potent Analogues of Clovibactin from Commercially Available Amino Acid Building Blocks.	Brunicardi JEH, Small JJ, Padilla MSTL, Carrera Plancarte JI, Nowick JS.	J Org Chem	10.1021/acs.joc.4c02828	2025
	Phytochemical analysis and evaluation of its antioxidant, antimicrobial, and cytotoxic activities for different extracts of Casuarina equisetifolia.	Abdallah WE, Shams KA, El-Shamy AM.	BMC Complement Med Ther	10.1186/s12906-024-04422-4	2024
	Vitex Genus as a Source of Antimicrobial Agents.	Islam Z, Caldeira GI, Canica M, Islam N, Silva O.	Plants (Basel)	10.3390/plants13030401	2024
	1,2,3-Triazoles and their metal chelates with antimicrobial activity.	Todorov L, Kostova I.	Front Chem	10.3389/fchem.2023.1247805	2023
	Structure-Activity Relationship Studies of the Peptide Antibiotic Clovibactin.	Brunicardi JEH, Griffin JH, Ferracane MJ, Kreutzer AG, Small J, Mendoza AT, Ziller JW, Nowick JS.	J Org Chem	10.1021/acs.joc.4c01414	2024
	Hydrazineyl-linked imidazole[1,2-a]pyrimidine-thiazole hybrids: design, synthesis, and in vitro biological evaluation studies.	P D, Naik S, D U, B C R, Ranjan V, Veeranagaiah NS.	RSC Adv	10.1039/d5ra04692k	2025
	Tailoring the natural rare sugars D-tagatose and L-sorbose to produce novel functional carbohydrates.	Hernandez-Hernandez O, Sabater C, Calvete-Torre I, Doyaguez EG, Munoz-Labrador AM, Julio-Gonzalez C, de Las Rivas B, Munoz R, Ruiz L, Margolles A, Mancheno JM, Moreno FJ.	NPJ Sci Food	10.1038/s41538-024-00320-8	2024
	Exploring Photocatalytic, Antimicrobial and Antioxidant Efficacy of Green-Synthesized Zinc Oxide Nanoparticles.	Shrestha S, Tiwari L, Dhungana S, Maharjan J, Khadka D, Kim AA, Pokhrel MR, Baral J, Park M, Poudel BR.	Nanomaterials (Basel)	10.3390/nano15110858	2025
	New Insights into the Antibacterial Activity of Hydroxytyrosol Extracted from Olive Leaves: Molecular Docking Simulations of its Antibacterial Mechanisms.	Ben Hassena A, Abidi J, Miled N, Kulinowski L, Skalicka-Wozniak K, Bouaziz M.	Chem Biodivers	10.1002/cbdv.202401714	2025
	Antibacterial efficacy and membrane mechanism of action of the Serratia-derived non-ionic lipopeptide, serrawettin W2-FL10.	Decker T, Rautenbach M, Khan S, Khan W.	Microbiol Spectr	10.1128/spectrum.02952-23	2024
	Antibacterial potential of Propolis: molecular docking, simulation and toxicity analysis.	Islam S, Hussain EA, Shujaat S, Khan MU, Ali Q, Malook SU, Ali D.	AMB Express	10.1186/s13568-024-01741-0	2024
	OSMAC-Driven Discovery of Six New Alkaloids from the Cold-Seep-Derived Fungus Talaromyces amestolkiae HDN21-0307.	Huang X, Wu J, Zhou L, Wang Z, Che Q, Chen L, Wang W, Zhu T, Li D.	Mar Drugs	10.3390/md23090337	2025
	An eco-friendly and cost-effective approach for the synthesis of a novel GA@CuO-ZnO nanocomposite: characterization, antimicrobial and anticancer activities.	El-Sayyad GS, El-Sayed ER, Rizk SH, Abdel-Maksoud MA, Zakri AM, Malik A, Malash MN, Hashem AH.	RSC Adv	10.1039/d4ra04312j	2025
	Flagellar Assembly Factor FliW2 De-Represses Helicobacter pylori FlaA-Mediated Motility by Allosteric Obstruction of Global Regulator CsrA.	Su MS, Dickins B, Kiang FY, Tsai WJ, Chen YL, Chen JW, Wang S, Tsai PJ, Wu JJ.	Helicobacter	10.1111/hel.70019	2025
	From genome to field: Bacillus halotolerans BJ-3 as a novel biocontrol solution for grapevine Botryosphaeria dieback.	Madushani MA, Li Y, Li X, Liu M, Chen P, Zhang W, Yan J.	Curr Res Microb Sci	10.1016/j.crmicr.2025.100483	2025
	The research on the identification, taxonomy, and comparative genomics analysis of nine Bacillus velezensis strains significantly contributes to microbiology, genetics, bioinformatics, and biotechnology.	Sousa EG, Campos GM, Viana MVC, Gomes GC, Rodrigues DLN, Aburjaile FF, Fonseca BB, de Araujo MRB, da Costa MM, Guedon E, Brenig B, Soares S, Azevedo V.	Front Microbiol	10.3389/fmicb.2025.1544934	2025
	Plasmid-encoded phosphatase RapP enhances cell growth in non-domesticated Bacillus subtilis strains.	Zhu M, Wang Y, Mu H, Han F, Wang Q, Pei Y, Wang X, Dai X.	Nat Commun	10.1038/s41467-024-53992-x	2024
	Draft Genome Sequences of Bacillus subtilis Strains TNC1(2019), TNC3(2019), and TNW1(2019), as Well as Bacillus velezensis Strains TNC2(2019) and TNW2(2019), Isolated from Cabbage Kimchee.	Perron GG, Neupane T, Mendoza RA.	Microbiol Resour Announc	10.1128/mra.00085-20	2020
	Chitosan-Zein Films Decorated with Green Synthesized Silver Nanoparticles Using Bergenia ciliata Extract.	Chand AB, Ashie M, Dahal R, Joshi RD, Tiwari AP, Joshi MK, Bastakoti BP, Kalauni SK.	Molecules	10.3390/molecules30112311	2025
Metabolism	Colombian cyanobacteria with cytotoxic activity in cancer cell lines.	Darwich-Cedeno MT, Montenegro-Ruiz LC, Reis M, Vasconcelos V.	Heliyon	10.1016/j.heliyon.2024.e37851	2024
	Effect of In Vitro Micropropagation on the Chemical, Antioxidant, and Biological Characteristics of Senecio nutans Sch. Bip., an Endemic Plant of the Atacama Desert Andean Region.	Parra C, Munoz-Torres P, Escobar H, Simirgiotis MJ, Contreras-Contreras G, Ruiz-Fernandez A, Maulen C, Martinez-Cifuentes M, Mariotti-Celis MS.	Plants (Basel)	10.3390/plants13060755	2024
	Investigation of Isobactin Analogues of Teixobactin.	Jones CR, Lai GH, Padilla MSTL, Nowick JS.	ACS Med Chem Lett	10.1021/acsmedchemlett.4c00215	2024
	Structural investigations and antibacterial, antifungal and anticancer studies on zinc salicylaldimine complexes.	Ibrahim AB, Williem ES, Elkhalik SA, Villinger A, Abbas SM.	Future Med Chem	10.1080/17568919.2024.2363672	2024
	Anabasis setifera leaf extract from arid habitat: A treasure trove of bioactive phytochemicals with potent antimicrobial, anticancer, and antioxidant properties.	Abdelaziz AM, A Abdel-Maksoud M, Fatima S, Almutairi S, Kiani BH, Hashem AH.	PLoS One	10.1371/journal.pone.0310298	2024
Enzymology	An alternative peptone preparation using Hermetia illucens (Black soldier fly) hydrolysis: process optimization and performance evaluation.	Liu G, Tiang MF, Ma S, Wei Z, Liang X, Sajab MS, Abdul PM, Zhou X, Ma Z, Ding G.	PeerJ	10.7717/peerj.16995	2024
	Contact angle analysis of biocolonized stone surfaces: Comparative study of benchtop and portable approaches to advance on-site applications.	Berti L, Gulotta D, Villa F, Toniolo L, Gianini G, Cappitelli F, Goidanich S.	iScience	10.1016/j.isci.2025.113282	2025
Cultivation	Sustainable production of 2,3,5,6-Tetramethylpyrazine at high titer in engineered Corynebacterium glutamicum.	Srinivasan A, Chen-Xiao K, Banerjee D, Oka A, Pidatala VR, Eudes A, Simmons BA, Eng T, Mukhopadhyay A.	J Ind Microbiol Biotechnol	10.1093/jimb/kuae026	2024
	In ovo probiotic supplementation supports hatchability and improves hatchling quality in broilers.	Gao M, Ren Y, Lu S, Reddyvari R, Venkitanarayanan K, Amalaradjou MA.	Poult Sci	10.1016/j.psj.2024.103624	2024
	Dietary fermented mixed ingredient product enhances growth performance and intestinal stem cell-mediated epithelial regeneration through Wnt/beta-catenin pathway in layer chicks.	Feng Y, Zeng N, Bordbar F, Lu Z, Gao C.	Poult Sci	10.1016/j.psj.2025.104821	2025
	Molecular Characterization of Ancient Prosaposin-like Proteins from the Protist Dictyostelium discoideum.	Ortjohann M, Leippe M.	Biochemistry	10.1021/acs.biochem.4c00479	2024
	Biocompatible antibiotic-coupled nickel-titanium nanoparticles as a potential coating material for biomedical devices.	McGlumphy S, Damai A, Salameh L, Corbin GB, Wang Q, Markiewicz J, Mosher JJ, Spitzer N, Quinones R.	Heliyon	10.1016/j.heliyon.2024.e31434	2024
	In Vitro Antibacterial, Cytotoxicity and Wound Healing Activities of Methanol and Aqueous Extracts from Achyranthes aspera.	Venkadassalapathy SD, Ramasamy M, Balashanmugam, Victor DJ, Subramanian S, Praveen JAA, Akbar MAR.	J Pharm Bioallied Sci	10.4103/jpbs.jpbs_175_23	2023
	A host-vector toolbox for improved secretory protein overproduction in Bacillus subtilis.	Kruger A, Welsch N, Durwald A, Brundiek H, Wardenga R, Piascheck H, Mengers HG, Krabbe J, Beyer S, Kabisch JF, Popper L, Hubel T, Antranikian G, Schweder T.	Appl Microbiol Biotechnol	10.1007/s00253-022-12062-2	2022
	Bacillus subtilis NDmed, a model strain for biofilm genetic studies.	Dergham Y, Le Coq D, Bridier A, Sanchez-Vizuete P, Jbara H, Deschamps J, Hamze K, Yoshida KI, Noirot-Gros MF, Briandet R.	Biofilm	10.1016/j.bioflm.2023.100152	2023
	Xylariaides A and B, novel cytochalasans with a unique 5/6/5/3 ring system from a soil fungus Xylaria sp. Y01.	Yuan YY, Li Y, Lu WY, Liang AL, Li J, Wang WX.	Nat Prod Bioprospect	10.1007/s13659-025-00507-w	2025
	Antimicrobial and food barrier properties of polyvinyl alcohol-lactic acid food packaging films.	Madivoli ES, Kisato J, Gichuki J, Wangui CM, Kimani PK, Kareru PG.	Food Sci Nutr	10.1002/fsn3.4291	2024
	Antibody-Functionalized Copper Oxide Nanoparticles with Targeted Antibacterial Activity.	Ontiveros-Robles JA, Villanueva-Flores F, Juarez-Moreno K, Simakov A, Vazquez-Duhalt R.	ChemistryOpen	10.1002/open.202200241	2023
	Alginate Films Enriched in Raspberry and/or Black Currant Seed Oils as Active Food Packaging.	Kowalonek J, Lukomska B, Lukomska O, Stachowiak-Trojanowska N.	Molecules	10.3390/molecules29092012	2024
	The novel sterilization device: the prototype testing.	Nowak R, Wityk P, Wierzbicka-Wos A, Gos W, Kostrzewa-Nowak D.	Sci Rep	10.1038/s41598-023-44483-y	2023
	Unlocking the Potential of Substrate Quality for the Enhanced Antibacterial Activity of Black Soldier Fly against Pathogens.	Achuoth MP, Mudalungu CM, Ochieng BO, Mokaya HO, Kibet S, Maharaj VJ, Subramanian S, Kelemu S, Tanga CM.	ACS Omega	10.1021/acsomega.3c09741	2024
	A novel strategy for Escherichia coli detection in raw beef in combination with click chemistry.	Alzahrani A.	NPJ Sci Food	10.1038/s41538-025-00422-x	2025
	Scalemic myrionsumamide A, tetracyclic skeleton alkaloids from Myrioneuron effusum.	Zhang JH, Cao M, Zhang Y, Li XH, Gu YC, Li XN, Di YT, Hao XJ.	RSC Adv	10.1039/d2ra05342j	2022
	Effect of Dietary Supplementation of Bacillus subtilis on Growth Performance, Organ Weight, Digestive Enzyme Activities, and Serum Biochemical Indices in Broiler.	Mohamed TM, Sun W, Bumbie GZ, Dosoky WM, Rao Z, Hu P, Wu L, Tang Z.	Animals (Basel)	10.3390/ani12121558	2022
	Complete Genome Sequence of the Prototrophic Bacillus subtilis subsp. subtilis Strain SP1.	Richts B, Hertel R, Potot S, Poehlein A, Daniel R, Schyns G, Pragai Z, Commichau FM.	Microbiol Resour Announc	10.1128/mra.00825-20	2020
	Evaluating citrus juice: A comparative study of physicochemical, nutraceutical, antioxidant, and antimicrobial properties of citrus juices from Nepal.	Karki N, Achhami H, Pachhai BB, Bhattarai S, Shahi DK, Bhatt LR, Joshi MK.	Heliyon	10.1016/j.heliyon.2024.e40773	2024
Enzymology	Enzymatic Characterization and Coenzyme Specificity Conversion of a Novel Dimeric Malate Dehydrogenase from Bacillus subtilis.	Ge YD, Guo YT, Jiang LL, Wang HH, Hou SL, Su FZ.	Protein J	10.1007/s10930-022-10087-0	2023
	Investigation of antioxidant and antibacterial effects of citrus fruits peels extracts using different extracting agents: Phytochemical analysis with in silico studies.	Saleem M, Durani AI, Asari A, Ahmed M, Ahmad M, Yousaf N, Muddassar M.	Heliyon	10.1016/j.heliyon.2023.e15433	2023
	Bioelectrical State of Bacteria Is Linked to Growth Dynamics and Response to Neurotransmitters: Perspectives for the Investigation of the Microbiota-Brain Axis.	Munoz-Rodriguez D, Bourqqia-Ramzi M, Garcia-Esteban MT, Murciano-Cespedosa A, Vian A, Lombardo-Hernandez J, Garcia-Perez P, Conejero F, Mateos Gonzalez A, Geuna S, Herrera-Rincon C.	Int J Mol Sci	10.3390/ijms241713394	2023
	Impact of different magnetic materials added to silver-magnetite nanoparticles on the structural, magnetic and antimicrobial properties.	El-Bassuony AAH, Gamal WM, Abdelsalam HK.	Eur Phys J Spec Top	10.1140/epjs/s11734-022-00759-4	2023
	A Review of the Antibacterial, Fungicidal and Antiviral Properties of Selenium Nanoparticles.	Serov DA, Khabatova VV, Vodeneev V, Li R, Gudkov SV.	Materials (Basel)	10.3390/ma16155363	2023
	Chemoenzymatic Modification of Daptomycin: Aromatic Group Installation on Trp1.	Dimas DA, Kumar V, Mandal PS, Masterson JM, Tonelli M, Singh S.	Chembiochem	10.1002/cbic.202400503	2024
	A statistical optimization by response surface methodology for the enhanced production of riboflavin from Lactobacillus plantarum-HDS27: A strain isolated from bovine milk.	Hemalatha M, Subathra Devi C.	Front Microbiol	10.3389/fmicb.2022.982260	2022
	Recent advances in the biosynthesis and industrial biotechnology of Gamma-amino butyric acid.	Milon RB, Hu P, Zhang X, Hu X, Ren L.	Bioresour Bioprocess	10.1186/s40643-024-00747-7	2024
	Effect of Thioflavin T on the Elongation Rate of Bacteria.	Han X, Payne CK.	Bioelectricity	10.1089/bioe.2021.0027	2022
	A Soil-Isolated Streptomyces spororaveus Species Produces a High-Molecular-Weight Antibiotic AF1 against Fungi and Gram-Positive Bacteria.	Chang PC, Liu SC, Ho MC, Huang TW, Huang CH.	Antibiotics (Basel)	10.3390/antibiotics11050679	2022
	Insight into the chemical composition, antioxidant capacity, meat quality, fatty acid profile, and volatile compounds of yellow-feathered chickens fed with fermented pineapple residue.	Lu P, Guo R, Zou C, Chen H, Chen D, Yang L, Tan H, Wu S, Lv Y, Xiao Z, Gao C.	Food Chem X	10.1016/j.fochx.2024.101874	2024
	Watermelon Rind Mediated Biosynthesis of Bimetallic Selenium-Silver Nanoparticles: Characterization, Antimicrobial and Anticancer Activities.	Hashem AH, El-Sayyad GS, Al-Askar AA, Marey SA, AbdElgawad H, Abd-Elsalam KA, Saied E.	Plants (Basel)	10.3390/plants12183288	2023
	Novel xanthan gum hydrogels boosted with crosslinked carboxymethyl chitosan and zinc oxide nanoparticles: synthesis, characterization and biological activity evaluation.	Almuthaybiri DMS, Alminderej FM, Mohamed NA.	BMC Chem	10.1186/s13065-025-01628-6	2025
	The use of low-cost brewery waste product for the production of surfactin as a natural microbial biocide.	Nazareth TC, Zanutto CP, Tripathi L, Juma A, Maass D, de Souza AAU, de Arruda Guelli Ulson de Souza SM, Banat IM.	Biotechnol Rep (Amst)	10.1016/j.btre.2020.e00537	2020
	Phytochemical characterization, antimicrobial and antioxidant activities of Terminalia catappa methanol and aqueous extracts.	Mwangi WC, Waudo W, Shigwenya ME, Gichuki J.	BMC Complement Med Ther	10.1186/s12906-024-04449-7	2024
	Marine Bromotyrosine Derivatives in Spotlight: Bringing Discoveries and Biological Significance.	Ferreira Montenegro P, Pham GN, Abdoul-Latif FM, Taffin-de-Givenchy E, Mehiri M.	Mar Drugs	10.3390/md22030132	2024
	Green biosynthesis of bimetallic selenium-gold nanoparticles using Pluchea indica leaves and their biological applications.	Aly Khalil AM, Saied E, Mekky AE, Saleh AM, Al Zoubi OM, Hashem AH.	Front Bioeng Biotechnol	10.3389/fbioe.2023.1294170	2023
	Phytoconstituents, In Vitro Anti-Infective Activity of Buddleja indica Lam., and In Silico Evaluation of its SARS-CoV-2 Inhibitory Potential.	Youssef FS, Altyar AE, Omar AM, Ashour ML.	Front Pharmacol	10.3389/fphar.2021.619373	2021
	Killing Two Birds with One Stone: Biomineralized Bacteria Tolerate Adverse Environments and Absorb Hexavalent Chromium.	Tang R, Shen L, Yang L, You K, Li Z, Wei X, Wang J.	ACS Omega	10.1021/acsomega.1c06877	2022
	Biogenic Zinc Oxide Nanoparticles as a Promising Antibacterial Agent: Synthesis and Characterization.	Okaiyeto K, Gigliobianco MR, Di Martino P.	Int J Mol Sci	10.3390/ijms25179500	2024
	Antimicrobial and antitumor properties of anuran peptide temporin-SHf induce apoptosis in A549 lung cancer cells.	Antony A, Purayil AK, Olakkaran S, Dhannura S, Shekh S, Gowd KH, Gurushankara HP.	Amino Acids	10.1007/s00726-023-03373-3	2024
	Identification and Characterization of a Potential Antibiotic Producing Strain of Pantoea ananatis.	LaGier MJ, McDaniel M, Ragner A, Castillo A.	J Genomics	10.7150/jgen.70066	2022
Biotechnology	Survival and virulence of Acinetobacter baumannii in microbial mixtures.	Tayabali AF, Dirieh Y, Groulx E, Elfarawi N, Di Fruscio S, Melanson K, Moteshareie H, Al-Gafari M, Navarro M, Bernatchez S, Demissie Z, Anoop V.	BMC Microbiol	10.1186/s12866-024-03471-6	2024
	Biogenic Synthesis and Characterization of Silver Nanoparticles: Evaluation of Their Larvicidal, Antibacterial, and Cytotoxic Activities.	Mahalingam S, Govindaraji PK, Solomon VG, Kesavan H, Neelan YD, Bakthavatchalam S, Kim J, Bakthavatchalam P.	ACS Omega	10.1021/acsomega.2c07531	2023
	Distributed compact plasma reactor decontamination for planetary protection in space missions.	Choudhury B, Revazishvili T, Lozada M, Roy S, Mastro EN, Portugal S, Roy S.	Sci Rep	10.1038/s41598-023-29049-2	2023
	Identification, characterization and hydrolase producing performance of thermophilic bacteria: geothermal hot springs in the Eastern and Southeastern Anatolia Regions of Turkey.	Ulucay O, Gormez A, Ozic C.	Antonie Van Leeuwenhoek	10.1007/s10482-021-01678-5	2022
	Endophytic Aspergillus hiratsukae mediated biosynthesis of silver nanoparticles and their antimicrobial and photocatalytic activities.	Saied E, Abdel-Maksoud MA, Alfuraydi AA, Kiani BH, Bassyouni M, Al-Qabandi OA, Bougafa FHE, Badawy MSEM, Hashem AH.	Front Microbiol	10.3389/fmicb.2024.1345423	2024
	Chemical profile and biological properties of the Piper corcovadense C.DC. essential oil.	Henrique Fontoura B, Cristina Perin E, Paula Buratto A, Francisco Schreiner J, Menezes Cavalcante K, Dias Teixeira S, Manica D, Antonio Narzetti R, Bruno da Silva G, Dulce Bagatini M, Luiza Cadorin Oldoni T, Teresinha Carpes S.	Saudi Pharm J	10.1016/j.jsps.2024.101993	2024
Metabolism	In ovo probiotic supplementation enhances energy status and promotes growth in developing broiler embryos and hatchlings.	Gao M, Ren Y, Amalaradjou MA.	Poult Sci	10.1016/j.psj.2025.105442	2025
	Bioactive Bibenzyl Enantiomers From the Tubers of Bletilla striata.	Zhou M, Jiang S, Chen C, Li J, Lou H, Wang M, Liu G, Liu H, Liu T, Pan W.	Front Chem	10.3389/fchem.2022.911201	2022
	Moringa oleifera Gum-Assisted Synthesis and Characterization of CoAg_xFe_2-xO₄: Insight into Structural, Magnetic, Optical, and Biomedical Properties.	Tamboli QY, Patange SM, Mohanta YK, Patil AD, Ali R, Bushnak I, Zakde K.	ACS Omega	10.1021/acsomega.3c06578	2024
	Antimicrobial Activity of Red Alga Flour (Gelidium sp.) and Its Effect on Quality Retention of Scomber scombrus during Refrigerated Storage.	Miranda JM, Trigo M, Barros-Velazquez J, Aubourg SP.	Foods	10.3390/foods11070904	2022
	Synthesis and application of fluorescent teixobactin analogs.	Morris MA, Jones CR, Nowick JS.	Methods Enzymol	10.1016/bs.mie.2021.12.006	2022
	Expanding the Chemical Diversity of Secondary Metabolites Produced by Two Marine-Derived Enterocin- and Wailupemycin-Producing Streptomyces Strains.	Xia K, Shang J, Sun J, Zhu W, Fu P.	ACS Omega	10.1021/acsomega.3c04199	2023
	Camel urine as a potential source of bioactive molecules showing their efficacy against pathogens: A systematic review.	Amina R, Habiba R, Abouddihaj B.	Saudi J Biol Sci	10.1016/j.sjbs.2024.103966	2024
	Advances in silver nanoparticles: a comprehensive review on their potential as antimicrobial agents and their mechanisms of action elucidated by proteomics.	Rodrigues AS, Batista JGS, Rodrigues MAV, Thipe VC, Minarini LAR, Lopes PS, Lugao AB.	Front Microbiol	10.3389/fmicb.2024.1440065	2024
	Semisynthetic derivatives of massarilactone D with cytotoxic and nematicidal activities.	Teponno RB, Noumeur SR, Stadler M.	Beilstein J Org Chem	10.3762/bjoc.21.48	2025
	Characterization of Rhizosphere Microbial Diversity and Selection of Plant-Growth-Promoting Bacteria at the Flowering and Fruiting Stages of Rapeseed.	Wang M, Sun H, Xu Z.	Plants (Basel)	10.3390/plants13020329	2024
	Two New 4-Hydroxy-2-pyridone Alkaloids with Antimicrobial and Cytotoxic Activities from Arthrinium sp. GZWMJZ-606 Endophytic with Houttuynia cordata Thunb.	Yin Y, Wang D, Wu D, He W, Zuo M, Zhu W, Xu Y, Wang L.	Molecules	10.3390/molecules28052192	2023
	Visualizing the mode of action and supramolecular assembly of teixobactin analogues in Bacillus subtilis.	Morris MA, Vallmitjana A, Grein F, Schneider T, Arts M, Jones CR, Nguyen BT, Hashemian MH, Malek M, Gratton E, Nowick JS.	Chem Sci	10.1039/d2sc01388f	2022
	Gramicidin A is hydrolyzed by a d-stereospecific peptidase produced by Bacillus anthracis.	Kaman WE, Nazmi K, Voskamp-Visser AI, Bikker FJ.	Environ Microbiol Rep	10.1111/1758-2229.13069	2022
	Testing of Anti-EMT, Anti-Inflammatory and Antibacterial Activities of 2',4'-Dimethoxychalcone.	Zhao P, Xu M, Gong K, Lu K, Ruan C, Yu X, Zhu J, Guan H, Zhu Q.	Pharmaceuticals (Basel)	10.3390/ph17050653	2024
	A multiplex Taqman PCR assay for MRSA detection from whole blood.	Duraiswamy S, Agarwalla S, Lok KS, Tse YY, Wu R, Wang Z.	PLoS One	10.1371/journal.pone.0294782	2023
	Rhynchophorus ferrugineus larvae: A novel source for combating broad-spectrum bacterial and fungal infections.	Niode NJ, Kepel BJ, Hessel SS, Kairupan TS, Tallei TE.	Vet World	10.14202/vetworld.2024.156-170	2024
	Synthesis, characterization and antimicrobial activity applications of grafted copolymer alginate-g-poly(N-vinyl imidazole).	Abdellatif Soliman SM, Sanad MF, Shalan AE.	RSC Adv	10.1039/d1ra01874d	2021
	Green, Eco-Friendly, Highly Biocompatible and Bioactive Nanocomposite-Based Biopolymers Loaded with ZnO@Fe₃O₄ Nanoparticles.	Allogmani AS, Mohamed RM, Hasanin MS.	Polymers (Basel)	10.3390/polym15173641	2023
	Polycyclic Tetramate Macrolactams-A Group of Natural Bioactive Metallophores.	Ding L, Zhang SD, Haidar AK, Bajimaya M, Guo Y, Larsen TO, Gram L.	Front Chem	10.3389/fchem.2021.772858	2021
	Green Biosynthesis of Zinc Oxide Nanoparticles Using Pluchea indica Leaf Extract: Antimicrobial and Photocatalytic Activities.	Al-Askar AA, Hashem AH, Elhussieny NI, Saied E.	Molecules	10.3390/molecules28124679	2023
	Integrative In Silico and Experimental Characterization of Endolysin LysPALS22: Structural Diversity, Ligand Binding Affinity, and Heterologous Expression.	Nawaz N, Nawaz S, Hussain A, Anayat M, Wen S, Wang F.	Int J Mol Sci	10.3390/ijms26178579	2025
	Biocomposite thermoplastic polyurethanes containing evolved bacterial spores as living fillers to facilitate polymer disintegration.	Kim HS, Noh MH, White EM, Kandefer MV, Wright AF, Datta D, Lim HG, Smiggs E, Locklin JJ, Rahman MA, Feist AM, Pokorski JK.	Nat Commun	10.1038/s41467-024-47132-8	2024
	Influence of Bacterial Competitors on Salmonella enterica and Enterohemorrhagic Escherichia coli Growth in Microbiological Media and Attachment to Vegetable Seeds.	Liu D, Walcott R, Mis Solval K, Chen J.	Foods	10.3390/foods10020285	2021
	Actinoflavosides B-D, Flavonoid Type Glycosides from Tidal Mudflat-Derived Actinomyces.	Jeong H, Jo SJ, Bae M, Kim YR, Moon K.	Mar Drugs	10.3390/md20090565	2022
	Rapid, Sensitive, and Selective Quantification of Bacillus cereus Spores Using xMAP Technology.	Moteshareie H, Hassen WM, Dirieh Y, Groulx E, Dubowski JJ, Tayabali AF.	Microorganisms	10.3390/microorganisms10071408	2022
	Draft Genome Sequence of Bacillus subtilis AS2, a Heavy Crude Oil-Degrading and Biosurfactant-Producing Bacterium Isolated from a Soil Sample.	Al-Sayegh A, Al-Wahaibi Y, Joshi S, Al-Bahry S, Elshafie A, Al-Bemani A.	Genome Announc	10.1128/genomea.00969-17	2017
	Plant Growth Promotion and Biocontrol of Leaf Blight Caused by Nigrospora sphaerica on Passion Fruit by Endophytic Bacillus subtilis Strain GUCC4.	Wang J, Qin S, Fan R, Peng Q, Hu X, Yang L, Liu Z, Baccelli I, Migheli Q, Berg G, Chen X, Cernava T.	J Fungi (Basel)	10.3390/jof9020132	2023
Transcriptome	Identifying novel antimicrobial peptides from venom gland of spider Pardosa astrigera by deep multi-task learning.	Lee B, Shin MK, Yoo JS, Jang W, Sung JS.	Front Microbiol	10.3389/fmicb.2022.971503	2022
	Seasonal Chemical Variability and Antimicrobial, Anti-Proliferative Potential of Essential Oils from Baccharis uncinella, B. retusa, and B. calvescens (Asteraceae).	Dlugoviet TF, Ferriani AP, Hendges APPK, Camargo RG, Duarte MCT, Duarte RMT, Ruiz ALTG, Nagata N, Marques FA, Sales Maia BHLN.	Plants (Basel)	10.3390/plants14091311	2025
	Design, Synthesis, and Biological Evaluation Studies of Novel Naphthalene-Chalcone Hybrids As Antimicrobial, Anticandidal, Anticancer, and VEGFR-2 Inhibitors.	Osmaniye D, Saglik BN, Khalilova N, Levent S, Bayazit G, Gul UD, Ozkay Y, Kaplancikli ZA.	ACS Omega	10.1021/acsomega.2c07256	2023
	Quantification of Motility in Bacillus subtilis at Temperatures Up to 84°C Using a Submersible Volumetric Microscope and Automated Tracking.	Dubay MM, Johnston N, Wronkiewicz M, Lee J, Lindensmith CA, Nadeau JL.	Front Microbiol	10.3389/fmicb.2022.836808	2022
Genetics	Characterization and Genomic Analysis of Escherichia coli O157:H7 Phage UAE_MI-01 Isolated from Birds.	Sultan-Alolama MI, Amin A, El-Tarabily KA, Vijayan R.	Int J Mol Sci	10.3390/ijms232314846	2022
	The shutdown of food digestion due to endoplasmic reticulum homeostasis disruption acts as a protective mechanism in C. elegans.	He Y, Zhang Y, Xie H, Shan Z, Hou Z, Qi B.	Nat Commun	10.1038/s41467-025-63712-8	2025
	Phytochemical Characterization and Evaluation of Biological Activities of Egyptian Carob Pods (Ceratonia siliqua L.) Aqueous Extract: In Vitro Study.	Darwish WS, Khadr AES, Kamel MAEN, Abd Eldaim MA, El Sayed IET, Abdel-Bary HM, Ullah S, Ghareeb DA.	Plants (Basel)	10.3390/plants10122626	2021
	Xanthone Dimers in Angiosperms, Fungi, Lichens: Comprehensive Review of Their Sources, Structures, and Pharmacological Properties.	Shi F, Fan M, Li H, Li S, Wang S.	Molecules	10.3390/molecules30040967	2025
Pathogenicity	Platinum Cyclooctadiene Complexes with Activity against Gram-positive Bacteria.	Frei A, Ramu S, Lowe GJ, Dinh H, Semenec L, Elliott AG, Zuegg J, Deckers A, Jung N, Brase S, Cain AK, Blaskovich MAT.	ChemMedChem	10.1002/cmdc.202100157	2021
	Improved conductivity and antibacterial activity of poly(2-aminothiophenol)-silver nanocomposite against human pathogens.	Boomi P, Anandha Raj J, Palaniappan SP, Poorani G, Selvam S, Gurumallesh Prabu H, Manisankar P, Jeyakanthan J, Langeswaran VK.	J Photochem Photobiol B	10.1016/j.jphotobiol.2017.11.029	2018
	Synthesis and Stereochemical Determination of the Peptide Antibiotic Novo29.	Krumberger M, Li X, Kreutzer AG, Peoples AJ, Nitti AG, Cunningham VA, Jones CR, Achorn C, Ling LL, Hughes DE, Nowick JS.	J Org Chem	10.1021/acs.joc.2c02648	2023
	Antioxidant, Antimicrobial, and Metabolomic Characterization of Blanched Pomegranate Peel Extracts: Effect of Cultivar.	Magangana TP, Makunga NP, Fawole OA, Fawole OA, Stander MA, Opara UL.	Molecules	10.3390/molecules27092979	2022
	In Vitro Antibacterial Activities of Methanolic Extracts of Fruits, Seeds, and Bark of Zanthoxylum armatum DC.	Phuyal N, Jha PK, Raturi PP, Rajbhandary S.	J Trop Med	10.1155/2020/2803063	2020
	Chemical Characterization, Nutritional and Bioactive Properties of Physalis peruviana Fruit from High Areas of the Atacama Desert.	Munoz P, Parra F, Simirgiotis MJ, Sepulveda Chavera GF, Parra C.	Foods	10.3390/foods10112699	2021
Phylogeny	Identification and Differentiation of Pseudomonas Species in Field Samples Using an rpoD Amplicon Sequencing Methodology.	Lauritsen JG, Hansen ML, Bech PK, Jelsbak L, Gram L, Strube ML.	mSystems	10.1128/msystems.00704-21	2021
	Landolphia (P. Beauv.) genus: Ethnobotanical, phytochemical and pharmacological studies.	Oladeji OS, Oluyori AP, Dada AO.	Saudi J Biol Sci	10.1016/j.sjbs.2024.103988	2024
	Sources and Extraction of Biopolymers and Manufacturing of Bio-Based Nanocomposites for Different Applications.	Azadi E, Dinari M, Derakhshani M, Reid KR, Karimi B.	Molecules	10.3390/molecules29184406	2024
	The microbiota of cork and yellow stain as a model for a new route for the synthesis of chlorophenols and chloroanisoles from the microbial degradation of suberin and/or lignin.	Ruiz-Munoz M, Ontanon I, Cobos R, Calvo-Pena C, Otero-Suarez R, Ferreira V, Rosello J, Coque JJR.	Microbiome	10.1186/s40168-024-02003-8	2025
	Bacterial-Specific Aggregation and Killing of Immunomodulatory Host Defense Peptides.	Nazeer N, Rodriguez-Lecompte JC, Ahmed M.	Pharmaceuticals (Basel)	10.3390/ph14090839	2021
	Functional Characterization, Antimicrobial Effects, and Potential Antibacterial Mechanisms of NpHM4, a Derived Peptide of Nautilus pompilius Hemocyanin.	Yuan C, Zheng X, Liu K, Yuan W, Zhang Y, Mao F, Bao Y.	Mar Drugs	10.3390/md20070459	2022
Genetics	Isolation, Characterization, and Comparative Genomic Analysis of Bacteriophage Ec_MI-02 from Pigeon Feces Infecting Escherichia coli O157:H7.	Sultan-Alolama MI, Amin A, Vijayan R, El-Tarabily KA.	Int J Mol Sci	10.3390/ijms24119506	2023
	Impact of Altitudinal Variation on the Phytochemical Profile, Anthelmintic and Antimicrobial Activity of Two Pinus Species.	Elkady WM, Gonaid MH, Yousif MF, El-Sayed M, Omar HAN.	Molecules	10.3390/molecules26113170	2021
	Complete Genome Sequence of Bacillus subtilis Strain ATCC 6051a, a Potential Host for High-Level Secretion of Industrial Enzymes.	Jeong H, Sim YM, Park SH, Choi SK.	Genome Announc	10.1128/genomea.00532-15	2015
	Anticancer, antimicrobial, insecticidal and molecular docking of sarcotrocheliol and cholesterol from the marine soft coral Sarcophyton Trocheliophorum.	Bashar MAE, Hamed A, El-Tabakh MAM, Hashem AH, Zaki AA, Al-Askar AA, Abou-Amra ES, El-Beeh ME, Mehany ABM, Shaaban M, Abdelaziz AM, Shaaban KA, Hasaballah AI.	Sci Rep	10.1038/s41598-024-75446-6	2024
	Sustainable biosynthesized bimetallic ZnO@SeO nanoparticles from pomegranate peel extracts: antibacterial, antifungal and anticancer activities.	Hashem AH, Al-Askar AA, Saeb MR, Abd-Elsalam KA, El-Hawary AS, Hasanin MS.	RSC Adv	10.1039/d3ra03260d	2023
	Altitude impact on the chemical profile and biological activities of Satureja thymbra L. essential oil.	Khalil N, El-Jalel L, Yousif M, Gonaid M.	BMC Complement Med Ther	10.1186/s12906-020-02982-9	2020
	Evaluation of Antimicrobial and Wound Healing Effects of Gold Nanoparticles Containing Abelmoschus esculentus (L.) Aqueous Extract.	Korani S, Rashidi K, Hamelian M, Jalalvand AR, Tajehmiri A, Korani M, Sathyapalan T, Sahebkar A.	Bioinorg Chem Appl	10.1155/2021/7019130	2021
	Identification and Biological Activity of NFAT-133 Congeners from Streptomyces pactum.	Zhou W, Posri P, Liu XJ, Ju Z, Lan WJ, Mahmud T.	J Nat Prod	10.1021/acs.jnatprod.1c00152	2021
	Geographic Variability of Berry Phytochemicals with Antioxidant and Antimicrobial Properties.	Georgescu C, Frum A, Virchea LI, Sumacheva A, Shamtsyan M, Gligor FG, Olah NK, Mathe E, Mironescu M.	Molecules	10.3390/molecules27154986	2022
	Pyrgos[n]cages: Redefining antibacterial strategy against drug resistance.	Zhang Y, Luo M, Shi X, Li A, Zhou W, Yin Y, Wang H, Wong WL, Feng X, He Q.	Sci Adv	10.1126/sciadv.adp4872	2024
	Antioxidant and Antibacterial Capacities of Origanum vulgare L. Essential Oil from the Arid Andean Region of Chile and its Chemical Characterization by GC-MS.	Simirgiotis MJ, Burton D, Parra F, Lopez J, Munoz P, Escobar H, Parra C.	Metabolites	10.3390/metabo10100414	2020
	Microbial Biosurfactant: A New Frontier for Sustainable Agriculture and Pharmaceutical Industries.	Kumar A, Singh SK, Kant C, Verma H, Kumar D, Singh PP, Modi A, Droby S, Kesawat MS, Alavilli H, Bhatia SK, Saratale GD, Saratale RG, Chung SM, Kumar M.	Antioxidants (Basel)	10.3390/antiox10091472	2021
	UHPLC-DAD Characterization of Origanum vulgare L. from Atacama Desert Andean Region and Antioxidant, Antibacterial and Enzyme Inhibition Activities.	Parra C, Munoz P, Bustos L, Parra F, Simirgiotis MJ, Escobar H.	Molecules	10.3390/molecules26072100	2021
	Cell Factory Engineering of Undomesticated Bacillus Strains Using a Modified Integrative and Conjugative Element for Efficient Plasmid Delivery.	Jeong DE, Kim MS, Kim HR, Choi SK.	Front Microbiol	10.3389/fmicb.2022.802040	2022
	Phytochemical Content, Antioxidant, Alpha-Glucosidase Inhibitory and Antibacterial Activities of Spineless Cactus Pear Cultivars.	Mabotja MB, Venter SL, Du Plooy CP, Kudanga T, Amoo SO.	Plants (Basel)	10.3390/plants10071312	2021
	Individualized, Additively Manufactured Drug-Releasing External Ear Canal Implant for Prevention of Postoperative Restenosis: Development, In Vitro Testing, and Proof of Concept in an Individual Curative Trial.	Matin-Mann F, Gao Z, Schwieger J, Ulbricht M, Domsta V, Senekowitsch S, Weitschies W, Seidlitz A, Doll K, Stiesch M, Lenarz T, Scheper V.	Pharmaceutics	10.3390/pharmaceutics14061242	2022
	Bacillus strains as human probiotics: characterization, safety, microbiome, and probiotic carrier.	Lee NK, Kim WS, Paik HD.	Food Sci Biotechnol	10.1007/s10068-019-00691-9	2019
	Discovering the anti-diabetic potential of pomegranate peel metabolites by examining molecular interplay with the thioredoxin-interacting protein.	Aslam T, Arif A, Arshad S, Muccee F, Ahmad K, Iqbal MO, Khalil U, Razak S, Afsar T, Almajwal A, Shafique H, Zain M.	Front Med (Lausanne)	10.3389/fmed.2023.1322450	2023
	Chemical composition, antioxidant, and antimicrobial activity of Elsholtzia beddomei C. B. Clarke ex Hook. f. essential oil.	Sripahco T, Khruengsai S, Charoensup R, Tovaranonte J, Pripdeevech P.	Sci Rep	10.1038/s41598-022-06358-6	2022
	Construction and Activity Study of a Natural Antibacterial Patch Based on Natural Active Substance-Green Porous Structures.	Gao X, Zhou Y, Gu J, Liu X, Zhang Z.	Molecules	10.3390/molecules28031319	2023
Enzymology	Assessment of probiotic and technological properties of Bacillus spp. isolated from Burkinabe Soumbala.	Dabire Y, Somda NS, Somda MK, Compaore CB, Mogmenga I, Ezeogu LI, Traore AS, Ugwuanyi JO, Dicko MH.	BMC Microbiol	10.1186/s12866-022-02642-7	2022
Metabolism	Antimicrobial activity of silver nanoparticles synthesised by using microbial biosurfactant produced by a newly isolated Bacillus vallismortis MDU6 strain.	Das M, Borah D, Patowary K, Borah M, Khataniar A, Bhusan Kakoti B.	IET Nanobiotechnol	10.1049/iet-nbt.2019.0038	2019
	The Silkworm as a Source of Natural Antimicrobial Preparations: Efficacy on Various Bacterial Strains.	Mastore M, Quadroni S, Caramella S, Brivio MF.	Antibiotics (Basel)	10.3390/antibiotics10111339	2021
Phylogeny	Development of an efficient antimicrobial susceptibility testing method with species identification by Nanopore sequencing of 16S rRNA amplicons.	Kawai Y, Ozawa N, Fukuda T, Suzuki N, Mikata K.	PLoS One	10.1371/journal.pone.0262912	2022
Pathogenicity	Study of Titanium-Silver Monolayer and Multilayer Films for Protective Applications in Biomedical Devices.	Mina-Aponza S, Castro-Narvaez SP, Caicedo-Bejarano LD, Bermeo-Acosta F.	Molecules	10.3390/molecules26164813	2021
	Griseococcin (1) from Bovistella radicata (Mont.) Pat and antifungal activity.	Ye Y, Zeng Q, Zeng Q.	BMC Microbiol	10.1186/s12866-020-01961-x	2020
	Antibacterial Regularity Mining Beneath the Systematic Activity Database of Lipopeptides Brevilaterins: An Instructive Activity Handbook for Its Food Application.	Liu Y, Han P, Jia Y, Chen Z, Li S, Ma A.	Foods	10.3390/foods11192991	2022
	Detection of Mycoplasma Contamination of Cell Culture by A Loop-Mediated Isothermal Amplification Method.	Soheily Z, Soleimani M, Majidzadeh-Ardebili K.	Cell J	10.22074/cellj.2019.5624	2019
	Microfluidic Giant Polymer Vesicles Equipped with Biopores for High-Throughput Screening of Bacteria.	Heuberger L, Messmer D, Dos Santos EC, Scherrer D, Lortscher E, Schoenenberger CA, Palivan CG.	Adv Sci (Weinh)	10.1002/advs.202307103	2024
	MicroMundo Upside Down: Targeted Searching for Antibiotics-Producing Bacteria From Soil With Reverse Antibiosis Approaches.	Alvarado M, Clemente-Casares P, Moreno DA, de Groot PWJ.	Front Microbiol	10.3389/fmicb.2020.577550	2020
	Visualizing Teixobactin Supramolecular Assemblies and Cell Wall Damage in B. Subtilis Using CryoEM.	Hurst PJ, Morris MA, Graham AA, Nowick JS, Patterson JP.	ACS Omega	10.1021/acsomega.1c04331	2021
	Phyto-fabricated silver nanoparticles inducing microbial cell death via reactive oxygen species-mediated membrane damage.	Naik LS, Ramana Devi CV.	IET Nanobiotechnol	10.1049/nbt2.12036	2021
	Shifting redox reaction equilibria on demand using an orthogonal redox cofactor.	Aspacio D, Zhang Y, Cui Y, Luu E, King E, Black WB, Perea S, Zhu Q, Wu Y, Luo R, Siegel JB, Li H.	Nat Chem Biol	10.1038/s41589-024-01702-5	2024
	Synthesis of optimized propolis solid lipid nanoparticles with desirable antimicrobial, antioxidant, and anti-cancer properties.	Shahab-Navaei F, Asoodeh A.	Sci Rep	10.1038/s41598-023-45768-y	2023
	Inactivation of Spores and Vegetative Forms of Clostridioides difficile by Chemical Biocides: Mechanisms of Biocidal Activity, Methods of Evaluation, and Environmental Aspects.	Augustyn W, Chrusciel A, Hreczuch W, Kalka J, Tarka P, Kierat W.	Int J Environ Res Public Health	10.3390/ijerph19020750	2022
	Artificial sweeteners stimulate horizontal transfer of extracellular antibiotic resistance genes through natural transformation.	Yu Z, Wang Y, Henderson IR, Guo J.	ISME J	10.1038/s41396-021-01095-6	2022
	Promising antimicrobial and antibiofilm activities of reduced graphene oxide-metal oxide (RGO-NiO, RGO-AgO, and RGO-ZnO) nanocomposites.	Elbasuney S, El-Sayyad GS, Tantawy H, Hashem AH.	RSC Adv	10.1039/d1ra04542c	2021
	Antimicrobial Activity and Mode of Action of Celastrol, a Nortriterpen Quinone Isolated from Natural Sources.	Padilla-Montano N, de Leon Guerra L, Moujir L.	Foods	10.3390/foods10030591	2021
	A Two-Step Surface Modification Methodology for the Advanced Protection of a Stone Surface.	Marinescu L, Motelica L, Ficai D, Ficai A, Oprea OC, Andronescu E, Holban AM.	Nanomaterials (Basel)	10.3390/nano14010068	2023
Pathogenicity	A Fluorescent Teixobactin Analogue.	Morris MA, Malek M, Hashemian MH, Nguyen BT, Manuse S, Lewis K, Nowick JS.	ACS Chem Biol	10.1021/acschembio.9b00908	2020
	Size-Controlled Ammonium-Based Homopolymers as Broad-Spectrum Antibacterials.	Haktaniyan M, Sharma R, Bradley M.	Antibiotics (Basel)	10.3390/antibiotics12081320	2023
	Ru(II) coordination compounds of N-N bidentate chelators with 1,2,3 triazole and isoquinoline subunits: Synthesis, spectroscopy and antimicrobial properties.	Kreofsky NW, Dillenburg MD, Villa EM, Fletcher JT.	Polyhedron	10.1016/j.poly.2019.114259	2020
	In ovo Feeding as a Tool for Improving Performance and Gut Health of Poultry: A Review.	Das R, Mishra P, Jha R.	Front Vet Sci	10.3389/fvets.2021.754246	2021
	Chemical characterization and antibacterial activities of Brazilian propolis extracts from Apis mellifera bees and stingless bees (Meliponini).	Gomes KO, Messias da Silva LCF, Dos Santos RD, Prado BA, da Silva Montes P, Silva Rodrigues LF, de Araujo MO, Bilac CA, Freire DO, Gris EF, Rodrigues da Silva IC, de Sa Barreto LCL, Orsi DC.	PLoS One	10.1371/journal.pone.0307289	2024
	Nano-functionalization and evaluation of antimicrobial activity of Tinospora cordifolia against the TolB protein of Pseudomonas aeruginosa - An antibacterial and computational study.	Nath H, Khataniar A, Bania KK, Mukerjee N, Al-Hussain SA, Zaki MEA, Rajkhowa S.	Front Microbiol	10.3389/fmicb.2023.1138106	2023
	New Verticillene Diterpenoids, Eudesmane Sesquiterpenoids, and Hydroperoxysteroids from the Further Chemical Investigation of a Taiwanese Soft Coral Cespitularia sp.	Fu CW, Lin YC, Chiou SF, Chen SL, Lin CC, Wang HC, Dai CF, Sheu JH.	Molecules	10.3390/molecules28041521	2023
	Pullulan or chitosan based active coating by incorporating polyphenols from lemon peel in raw poultry meat.	Maru VR, Gupta S, Ranade V, Variyar PS.	J Food Sci Technol	10.1007/s13197-020-04841-4	2021
	Phytochemical Composition, Antimicrobial, Anticancer Properties, and Antioxidant Potential of Green Husk from Several Walnut Varieties (Juglans regia L.).	Barekat S, Nasirpour A, Keramat J, Dinari M, Meziane-Kaci M, Paris C, Desobry S.	Antioxidants (Basel)	10.3390/antiox12010052	2022
	Antibacterial and Antifungal Alkaloids from Asian Angiosperms: Distribution, Mechanisms of Action, Structure-Activity, and Clinical Potentials.	Sulaiman M, Jannat K, Nissapatorn V, Rahmatullah M, Paul AK, de Lourdes Pereira M, Rajagopal M, Suleiman M, Butler MS, Break MKB, Weber JF, Wilairatana P, Wiart C.	Antibiotics (Basel)	10.3390/antibiotics11091146	2022
	Antimicrobial Potency and E. coli beta-Carbonic Anhydrase Inhibition Efficacy of Phenazone-Based Molecules	Rashdan H, El-Sayyad G, Shehadi I, Abdelmonsef A.	Molecules		2023
	Fluorinated Quaternary Chitosan Derivatives: Synthesis, Characterization, Antibacterial Activity, and Killing Kinetics.	Cele ZED, Somboro AM, Amoako DG, Ndlandla LF, Balogun MO.	ACS Omega	10.1021/acsomega.0c01355	2020
	Susceptibility of Vegetative Cells and Endospores of Bacillus cereus to Rhamnolipid Biosurfactants and Their Potential Application in Dairy.	Bertuso PC, Marangon CA, Nitschke M.	Microorganisms	10.3390/microorganisms10091860	2022
	Peracetic acid-based disinfectant is the most appropriate solution for a biological decontamination procedure of responders and healthcare workers in the field environment.	Rybka A, Gavel A, Kroupa T, Meloun J, Prazak P, Draessler J, Pavlis O, Kubickova P, Kratzerova L, Pejchal J.	J Appl Microbiol	10.1111/jam.15041	2021
	Functional Cyperus esculentus L. Cookies Enriched with the Probiotic Strain Lacticaseibacillus rhamnosus SL42.	Belmadani N, Kassous W, Keddar K, Amtout L, Hamed D, Douma-Bouthiba Z, Costache V, Gerard P, Ziar H.	Foods	10.3390/foods13162541	2024
	Daphnia magna and Gammarus pulex, novel promising agents for biomedical and agricultural applications.	Khattab AM, Abo-Taleb HA, Abdelaziz AM, El-Tabakh MAM, El-Feky MMM, Abu-Elghait M.	Sci Rep	10.1038/s41598-022-17790-z	2022
	Chrysanthemum indicum and Chrysanthemum morifolium: Chemical Composition of Their Essential Oils and Their Potential Use as Natural Preservatives with Antimicrobial and Antioxidant Activities.	Youssef FS, Eid SY, Alshammari E, Ashour ML, Wink M, El-Readi MZ, El-Readi MZ.	Foods	10.3390/foods9101460	2020
	Unveiling anticancer, antimicrobial, and antioxidant activities of novel synthesized bimetallic boron oxide-zinc oxide nanoparticles.	Hashem AH, Rizk SH, Abdel-Maksoud MA, Al-Qahtani WH, AbdElgawad H, El-Sayyad GS.	RSC Adv	10.1039/d3ra03413e	2023
	Super-Cationic Peptide Dendrimers-Synthesis and Evaluation as Antimicrobial Agents.	Ramchuran EJ, Perez-Guillen I, Bester LA, Khan R, Albericio F, Vinas M, de la Torre BG.	Antibiotics (Basel)	10.3390/antibiotics10060695	2021
	HPLC-PDA-ESI-MS/MS Profiling and Anti-Biofilm Potential of Eucalyptussideroxylon Flowers.	Okba MM, El-Shiekh RA, Abu-Elghait M, Sobeh M, Ashour RMS.	Antibiotics (Basel)	10.3390/antibiotics10070761	2021
	A new point-of-care test for the rapid detection of urinary tract infections.	Arienzo A, Cellitti V, Ferrante V, Losito F, Stalio O, Murgia L, Marino R, Cristofano F, Orru M, Visca P, Di Somma S, Silvestri L, Ziparo V, Antonini G.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-019-03728-3	2020
	Diversity and Distribution of Volatile Secondary Metabolites Throughout Bacillus subtilis Isolates.	Kai M.	Front Microbiol	10.3389/fmicb.2020.00559	2020
	Bugs on Drugs: A Drosophila melanogaster Gut Model to Study In Vivo Antibiotic Tolerance of E. coli.	Van den Bergh B.	Microorganisms	10.3390/microorganisms10010119	2022
	Antimicrobial Activity of Green Silver Nanoparticles Synthesized by Different Extracts from the Leaves of Saudi Palm Tree (Phoenix Dactylifera L.).	Al Mutairi JF, Al-Otibi F, Alhajri HM, Alharbi RI, Alarifi S, Alterary SS.	Molecules	10.3390/molecules27103113	2022
Genetics	Insights into the draft genome sequence of bioactives-producing Bacillus thuringiensis DNG9 isolated from Algerian soil-oil slough.	Daas MS, Rosana ARR, Acedo JZ, Douzane M, Nateche F, Kebbouche-Gana S, Vederas JC.	Stand Genomic Sci	10.1186/s40793-018-0331-1	2018
Genetics	Strain-Dependent Adhesion Variations of Shouchella clausii Isolated from Healthy Human Volunteers: A Study on Cell Surface Properties and Potential Probiotic Benefits.	Dhakephalkar T, Pisu V, Margale P, Chandras S, Shetty D, Wagh S, Dagar SS, Kapse N, Dhakephalkar PK.	Microorganisms	10.3390/microorganisms12091771	2024
	Rapid Characterization of Bacterial Lipids with Ambient Ionization Mass Spectrometry for Species Differentiation.	Su H, Jiang ZH, Chiou SF, Shiea J, Wu DC, Tseng SP, Jain SH, Chang CY, Lu PL.	Molecules	10.3390/molecules27092772	2022
	Antibacterial activity of Citrus limonum fruit juice extract.	Okeke MI, Okoli AS, Eze EN, Ekwume GC, Okosa EU, Iroegbu CU.	Pak J Pharm Sci		2015
Pathogenicity	Efficacy of mycosynthesised AgNPs from Earliella scabrosa as an in vitro antibacterial and wound healing agent.	Kithiyon M, Pannerselvam B, Balasaubramaniyam Madhukumar SS, Sridharan J, Alagumuthu TS.	IET Nanobiotechnol	10.1049/iet-nbt.2018.5237	2019
	Neo-5,22E-Cholestadienol Derivatives from Buthus martensii Karsch and Targeted Bactericidal Action Mechanisms.	Lv B, Yin W, Gao J, Liu H, Liu K, Bai J, Yang Q.	Molecules	10.3390/molecules24010072	2018
	Development and Comparison of In-house Line Probe Assay (LiPA) and SYBR Green Real-time PCR Regarding the Detection of Periodontal Pathogens.	Soleimani M, Zolfaghari MR.	Avicenna J Med Biotechnol		2019
	Cross-Flow Microfiltration of Glycerol Fermentation Broths with Citrobacter freundii.	Tomczak W, Gryta M.	Membranes (Basel)	10.3390/membranes10040067	2020
	Biomimetic synergistic effect of redox site and Lewis acid for construction of efficient artificial enzyme.	Si H, Du D, Jiao C, Sun Y, Li L, Tang B.	Nat Commun	10.1038/s41467-024-50687-1	2024
Genetics	Global marine microbial diversity and its potential in bioprospecting.	Chen J, Jia Y, Sun Y, Liu K, Zhou C, Liu C, Li D, Liu G, Zhang C, Yang T, Huang L, Zhuang Y, Wang D, Xu D, Zhong Q, Guo Y, Li A, Seim I, Jiang L, Wang L, Lee SMY, Liu Y, Wang D, Zhang G, Liu S, Wei X, Yue Z, Zheng S, Shen X, Wang S, Qi C, Chen J, Ye C, Zhao F, Wang J, Fan J, Li B, Sun J, Jia X, Xia Z, Zhang H, Liu J, Zheng Y, Liu X, Wang J, Yang H, Kristiansen K, Xu X, Mock T, Li S, Zhang W, Fan G.	Nature	10.1038/s41586-024-07891-2	2024
	Polycaprolactone/gelatin electrospun nanofibres containing biologically produced tellurium nanoparticles as a potential wound dressing scaffold: Physicochemical, mechanical, and biological characterisation.	Doostmohammadi M, Forootanfar H, Shakibaie M, Torkzadeh-Mahani M, Rahimi HR, Jafari E, Ameri A, Ameri A.	IET Nanobiotechnol	10.1049/nbt2.12020	2021
Metabolism	Inactivation of cysL Inhibits Biofilm Formation by Activating the Disulfide Stress Regulator Spx in Bacillus subtilis.	Kobayashi K.	J Bacteriol	10.1128/jb.00712-18	2019
Metabolism	Characterization of a hypothetical protein YVRE from Bacillus subtilis indicates its key role as glucono-lactonase in pentose phosphate pathway and glucose metabolism.	Reshma SV, Sathyanarayanan N, Nagendra HG.	Bioinformation	10.6026/97320630013430	2017
Pathogenicity	Synthesis of novel pyrroles and fused pyrroles as antifungal and antibacterial agents.	Abd El-Hameed RH, Sayed AI, Mahmoud Ali S, Mosa MA, Khoder ZM, Fatahala SS.	J Enzyme Inhib Med Chem	10.1080/14756366.2021.1984904	2021
	Identification of soil bacteria capable of utilizing a corn ethanol fermentation byproduct.	Packard H, Taylor ZW, Williams SL, Guimaraes PI, Toth J, Jensen RV, Senger RS, Kuhn DD, Stevens AM.	PLoS One	10.1371/journal.pone.0212685	2019
	Development of a fluorescence assay for highly sensitive detection of Pseudomonas aeruginosa based on an aptamer-carbon dots/graphene oxide system.	Wang H, Chi Z, Cong Y, Wang Z, Jiang F, Geng J, Zhang P, Ju P, Dong Q, Liu C.	RSC Adv	10.1039/c8ra04819c	2018
	In Vitro Antibacterial Activity of Teixobactin Derivatives on Clinically Relevant Bacterial Isolates.	Ramchuran EJ, Somboro AM, Abdel Monaim SAH, Amoako DG, Parboosing R, Kumalo HM, Agrawal N, Albericio F, Torre BG, Bester LA.	Front Microbiol	10.3389/fmicb.2018.01535	2018
	Design, Synthesis, and Study of Lactam and Ring-Expanded Analogues of Teixobactin.	Yang H, Pishenko AV, Li X, Nowick JS.	J Org Chem	10.1021/acs.joc.9b02631	2020
	The ethnomedicine, phytochemistry, and pharmacological properties of the genus Bersama: current review and future perspectives.	Nigussie G, Ashenef S, Meresa A.	Front Pharmacol	10.3389/fphar.2024.1366427	2024
	Water behavior in bacterial spores by deuterium NMR spectroscopy.	Friedline AW, Zachariah MM, Johnson K, Thomas KJ, Middaugh AN, Garimella R, Powell DR, Vaishampayan PA, Rice CV.	J Phys Chem B	10.1021/jp5025119	2014
	A Seed-Endophytic Bacillus safensis Strain With Antimicrobial Activity Has Genes for Novel Bacteriocin-Like Antimicrobial Peptides.	Romero-Severson J, Moran TE, Shrader DG, Fields FR, Pandey-Joshi S, Thomas CL, Palmer EC, Shrout JD, Pfrender ME, Lee SW.	Front Microbiol	10.3389/fmicb.2021.734216	2021
Metabolism	Implication of a Key Region of Six Bacillus cereus Genes Involved in Siroheme Synthesis, Nitrite Reductase Production and Iron Cluster Repair in the Bacterial Response to Nitric Oxide Stress.	Porrini C, Guerin C, Tran SL, Dervyn R, Nicolas P, Ramarao N.	Int J Mol Sci	10.3390/ijms22105079	2021
	Site-Specific Isopeptide Bond Formation: A Powerful Tool for the Generation of Potent and Nontoxic Antimicrobial Peptides.	Wani NA, Stolovicki E, Hur DB, Shai Y.	J Med Chem	10.1021/acs.jmedchem.2c00061	2022
	Non-Antibiotics Strategies to Control Salmonella Infection in Poultry.	Ruvalcaba-Gomez JM, Villagran Z, Valdez-Alarcon JJ, Martinez-Nunez M, Gomez-Godinez LJ, Ruesga-Gutierrez E, Anaya-Esparza LM, Arteaga-Garibay RI, Villarruel-Lopez A.	Animals (Basel)	10.3390/ani12010102	2022
	Design, Synthesis, and Characterization of Novel Bis-Uracil Chitosan Hydrogels Modified with Zinc Oxide Nanoparticles for Boosting Their Antimicrobial Activity.	Alharbi RA, Alminderej FM, Al-Harby NF, Elmehbad NY, Mohamed NA.	Polymers (Basel)	10.3390/polym15040980	2023
	Isobactins: O-acyl isopeptide prodrugs of teixobactin and teixobactin derivatives.	Jones CR, Guaglianone G, Lai GH, Nowick JS.	Chem Sci	10.1039/d2sc02670h	2022
	Extracellular Enzymes and Bioactive Compounds from Antarctic Terrestrial Fungi for Bioprospecting.	Zucconi L, Canini F, Temporiti ME, Tosi S.	Int J Environ Res Public Health	10.3390/ijerph17186459	2020
	Selective Detection of Legionella pneumophila Serogroup 1 and 5 with a Digital Photocorrosion Biosensor Using Antimicrobial Peptide-Antibody Sandwich Strategy.	Islam MA, Hassen WM, Ishika I, Tayabali AF, Dubowski JJ.	Biosensors (Basel)	10.3390/bios12020105	2022
	Disinfectant Activity of A Portable Ultraviolet C Equipment.	Guridi A, Sevillano E, de la Fuente I, Mateo E, Eraso E, Quindos G.	Int J Environ Res Public Health	10.3390/ijerph16234747	2019
	The secondary metabolites of rare actinomycetes: chemistry and bioactivity.	Ding T, Yang LJ, Zhang WD, Shen YH.	RSC Adv	10.1039/c9ra03579f	2019
	Ajuga reptans L. Herb Extracts: Phytochemical Composition and Pharmacological Activity Screening.	Maliuvanchuk S, Grytsyk A, Popadynets O, Kotyk T, Raal A, Koshovyi O.	Plants (Basel)	10.3390/plants14020219	2025
	Shrimp Waste Upcycling: Unveiling the Potential of Polysaccharides, Proteins, Carotenoids, and Fatty Acids with Emphasis on Extraction Techniques and Bioactive Properties.	Rossi N, Grosso C, Delerue-Matos C.	Mar Drugs	10.3390/md22040153	2024
	Isolation and Characterization of a Novel Diethylstilbestrol-Degrading Bacillus subtilis JF and Biochemical Degradation Metabolite Analysis.	Deng W, Zhao Y, Hu K, Chen S, He L, Ao X, Zou L, Hu X, Yang Y, Liu S.	Front Microbiol	10.3389/fmicb.2019.02538	2019
	Antibacterial Potential of Secondary Metabolites from Indonesian Marine Bacterial Symbionts.	Nofiani R, Weisberg AJ, Tsunoda T, Panjaitan RGP, Brilliantoro R, Chang JH, Philmus B, Mahmud T.	Int J Microbiol	10.1155/2020/8898631	2020
	Antibacterial Activity of 2-(3',5'-Dibromo-2'-methoxyphenoxy)-3,5- dibromophenol Isolated from Phyllospongia papyracea.	Sun S, Canning C, Wang K, Zhu W, Yang F, Zhang Y, Zhou K.	Nat Prod Commun	10.1177/1934578x1701200426	2017
	Draft Genome Sequences of 59 Endospore-Forming Gram-Positive Bacteria Associated with Crop Plants Grown in Vietnam.	Tam LTT, Jahne J, Luong PT, Thao LTP, Chung LTK, Schneider A, Blumenscheit C, Lasch P, Schweder T, Borriss R.	Microbiol Resour Announc	10.1128/mra.01154-20	2020
Metabolism	Heat stress as an innovative approach to enhance the antioxidant production in Pseudooceanicola and Bacillus isolates.	Hassan AHA, Hozzein WN, Mousa ASM, Rabie W, Alkhalifah DHM, Selim S, AbdElgawad H.	Sci Rep	10.1038/s41598-020-72054-y	2020
Biotechnology	Holm Oak (Quercus ilex subsp. ballota (Desf.) Samp.) Bark Aqueous Ammonia Extract for the Control of Invasive Forest Pathogens.	Sanchez-Hernandez E, Balduque-Gil J, Barriuso-Vargas JJ, Casanova-Gascon J, Gonzalez-Garcia V, Cuchi-Oterino JA, Lorenzo-Vidal B, Martin-Gil J, Martin-Ramos P.	Int J Mol Sci	10.3390/ijms231911882	2022
Enzymology	A lectin-coupled porous silicon-based biosensor: label-free optical detection of bacteria in a real-time mode.	Yaghoubi M, Rahimi F, Negahdari B, Rezayan AH, Shafiekhani A.	Sci Rep	10.1038/s41598-020-72457-x	2020
	High levels of DegU-P activate an Esat-6-like secretion system in Bacillus subtilis.	Baptista C, Barreto HC, Sao-Jose C.	PLoS One	10.1371/journal.pone.0067840	2013
	Antimicrobial 1,3,4-trisubstituted-1,2,3-triazolium salts.	Fletcher JT, Sobczyk JM, Gwazdacz SC, Blanck AJ.	Bioorg Med Chem Lett	10.1016/j.bmcl.2018.09.011	2018
	Development of A Loop-Mediated Isothermal Amplification (LAMP) Assay for Detection of Relapsing Fever Borreliae.	Houmansadr F, Soleimani M, Naddaf SR.	J Arthropod Borne Dis	10.18502/jad.v14i1.2703	2020
Metabolism	New from Old: Thorectandrin Alkaloids in a Southern Australian Marine Sponge, Thorectandra choanoides (CMB-01889).	Khushi S, Salim AA, Elbanna AH, Nahar L, Capon RJ.	Mar Drugs	10.3390/md19020097	2021
	Pseudomonas koreensis Recovered From Raw Yak Milk Synthesizes a beta-Carboline Derivative With Antimicrobial Properties.	Kaur M, Jangra M, Singh H, Tambat R, Singh N, Jachak SM, Mishra S, Sharma C, Nandanwar H, Pinnaka AK.	Front Microbiol	10.3389/fmicb.2019.01728	2019
Enzymology	Upregulation and Identification of Antibiotic Activity of a Marine-Derived Streptomyces sp. via Co-Cultures with Human Pathogens.	Sung AA, Gromek SM, Balunas MJ.	Mar Drugs	10.3390/md15080250	2017
	Antioxidative, Antifungal and Additive Activity of the Antimicrobial Peptides Leg1 and Leg2 from Chickpea.	Heymich ML, Nissl L, Hahn D, Noll M, Pischetsrieder M.	Foods	10.3390/foods10030585	2021
	Merging antimicrobial and visible emission properties within 1,3,4-trisubstituted-1,2,3-triazolium salts.	Lejcher CA, Villa EM, Fletcher JT.	Med Chem Res	10.1007/s00044-022-02855-5	2022
Metabolism	Natural Product Potential of the Genus Nocardiopsis.	Ibrahim AH, Desoukey SY, Fouad MA, Kamel MS, Gulder TAM, Abdelmohsen UR.	Mar Drugs	10.3390/md16050147	2018
	Copolymers enhance selective bacterial community colonization for potential root zone applications.	Pham VTH, Murugaraj P, Mathes F, Tan BK, Truong VK, Murphy DV, Mainwaring DE.	Sci Rep	10.1038/s41598-017-16253-0	2017
	A Visualized Isothermal Amplification Method for Rapid and Specific Detection of Emetic and Non-emetic Bacillus cereus in Dairy Products.	Wang L, Yang H, Wang K, Yang H, Zhao M, Shang Y, Wang F, Dong J, Zhao W, Li L, Liang W, Wang Y.	Front Microbiol	10.3389/fmicb.2022.802656	2022
	Expression of retrotransposons contributes to aging in Drosophila.	Schneider BK, Sun S, Lee M, Li W, Skvir N, Neretti N, Vijg J, Secombe J.	Genetics	10.1093/genetics/iyad073	2023
	Profile of the main bioactive compounds and in vitro biological activity of different solvent extracts from Ginkgo biloba exocarp.	Cui N, Zhang L, Quan M, Xu J.	RSC Adv	10.1039/d0ra09490k	2020
	kinA mRNA is missing a stop codon in the undomesticated Bacillus subtilis strain ATCC 6051.	Kobayashi K, Kuwana R, Takamatsu H.	Microbiology (Reading)	10.1099/mic.0.2007/011783-0	2008
	Isolation and Identification of Flavones Responsible for the Antibacterial Activities of Tillandsia bergeri Extracts.	Lo MM, Benfodda Z, Dunyach-Remy C, Benimelis D, Roulard R, Fontaine JX, Mathiron D, Quero A, Molinie R, Meffre P.	ACS Omega	10.1021/acsomega.2c04195	2022
	Antibacterial Screening, Biochemometric and Bioautographic Evaluation of the Non-Volatile Bioactive Components of Three Indigenous South African Salvia Species.	Lim Ah Tock M, Combrinck S, Kamatou G, Chen W, Van Vuuren S, Viljoen A.	Antibiotics (Basel)	10.3390/antibiotics11070901	2022
Genetics	Transductomics: sequencing-based detection and analysis of transduced DNA in pure cultures and microbial communities.	Kleiner M, Bushnell B, Sanderson KE, Hooper LV, Duerkop BA.	Microbiome	10.1186/s40168-020-00935-5	2020
Proteome	Ultra-sensitive isotope probing to quantify activity and substrate assimilation in microbiomes.	Kleiner M, Kouris A, Violette M, D'Angelo G, Liu Y, Korenek A, Tolic N, Sachsenberg T, McCalder J, Lipton MS, Strous M.	Microbiome	10.1186/s40168-022-01454-1	2023
	Consequences of Depsipeptide Substitution on the ClpP Activation Activity of Antibacterial Acyldepsipeptides.	Li Y, Lavey NP, Coker JA, Knobbe JE, Truong DC, Yu H, Lin YS, Nimmo SL, Duerfeldt AS.	ACS Med Chem Lett	10.1021/acsmedchemlett.7b00320	2017
	Electrochemical cell lysis of gram-positive and gram-negative bacteria: DNA extraction from environmental water samples.	Wang S, Zhu Y, Yang Y, Li J, Hoffmann MR.	Electrochim Acta	10.1016/j.electacta.2020.135864	2020
	Investigation of the N-Terminus Amino Function of Arg₁₀-Teixobactin.	Monaim SAHA, Noki S, Ramchuran EJ, El-Faham A, Albericio F, Torre BG.	Molecules	10.3390/molecules22101632	2017
	Nutritional, Antioxidant, Antimicrobial, and Anticholinesterase Properties of Phyllanthus emblica: A Study Supported by Spectroscopic and Computational Investigations.	Orabi MAA, Hasan AH, AbouZid SF, El Amir D, Hetta MH, Awadh AAA, Alqahtani OS, Hatano T, El-Shanawany MA.	Metabolites	10.3390/metabo13091013	2023
	Exploiting in vitro potential and characterization of surface modified Zinc oxide nanoparticles of Isodon rugosus extract: Their clinical potential towards HepG2 cell line and human pathogenic bacteria.	Siddiquah A, Hashmi SS, Mushtaq S, Renouard S, Blondeau JP, Abbasi R, Hano C, Abbasi BH.	EXCLI J	10.17179/excli2018-1327	2018
	Production of Vitamin B2 (Riboflavin) by Microorganisms: An Overview.	Averianova LA, Balabanova LA, Son OM, Podvolotskaya AB, Tekutyeva LA.	Front Bioeng Biotechnol	10.3389/fbioe.2020.570828	2020
	Levan-Capped Silver Nanoparticles for Bactericidal Formulations: Release and Activity Modelling.	Gonzalez-Garcinuno A, Masa R, Hernandez M, Dominguez A, Tabernero A, Del Valle EM.	Int J Mol Sci	10.3390/ijms20061502	2019
Enzymology	Microbial proteases: ubiquitous enzymes with innumerable uses.	Solanki P, Putatunda C, Kumar A, Bhatia R, Walia A.	3 Biotech	10.1007/s13205-021-02928-z	2021
	In Vitro Persistence Level Reflects In Vivo Antibiotic Survival of Natural Pseudomonas aeruginosa Isolates in a Murine Lung Infection Model.	Verstraete L, Aizawa J, Govaerts M, De Vooght L, Lavigne R, Michiels J, Van den Bergh B, Cos P.	Microbiol Spectr	10.1128/spectrum.04970-22	2023
Metabolism	Site-specific and kinetic characterization of enzymatic and nonenzymatic protein acetylation in bacteria.	Wang MM, You D, Ye BC.	Sci Rep	10.1038/s41598-017-13897-w	2017
Genetics	Complete Nucleotide Sequence Analysis of a Novel Bacillus subtilis-Infecting Bacteriophage BSP10 and Its Effect on Poly-Gamma-Glutamic Acid Degradation.	Ghosh K, Senevirathne A, Kang HS, Hyun WB, Kim JE, Kim KP.	Viruses	10.3390/v10050240	2018
	Current Knowledge on the Oxidative-Stress-Mediated Antimicrobial Properties of Metal-Based Nanoparticles.	Mammari N, Lamouroux E, Boudier A, Duval RE.	Microorganisms	10.3390/microorganisms10020437	2022
Enzymology	Mindapyrroles A-C, Pyoluteorin Analogues from a Shipworm-Associated Bacterium.	Lacerna NM, Miller BW, Lim AL, Tun JO, Robes JMD, Cleofas MJB, Lin Z, Salvador-Reyes LA, Haygood MG, Schmidt EW, Concepcion GP.	J Nat Prod	10.1021/acs.jnatprod.8b00979	2019
	[Progress on the design and optimization of antimicrobial peptides].	Zhang R, Wu D, Gao Y.	Sheng Wu Yi Xue Gong Cheng Xue Za Zhi	10.7507/1001-5515.202206017	2022
	Anti-Planktonic and Anti-Biofilm Properties of Pentacyclic Triterpenes-Asiatic Acid and Ursolic Acid as Promising Antibacterial Future Pharmaceuticals.	Sycz Z, Tichaczek-Goska D, Wojnicz D.	Biomolecules	10.3390/biom12010098	2022
Genetics	Evaluation of surfactin synthesis in a genome reduced Bacillus subtilis strain.	Geissler M, Kuhle I, Morabbi Heravi K, Altenbuchner J, Henkel M, Hausmann R.	AMB Express	10.1186/s13568-019-0806-5	2019
	Design, Synthesis, and Antibacterial Screening of Some Novel Heteroaryl-Based Ciprofloxacin Derivatives as DNA Gyrase and Topoisomerase IV Inhibitors.	Al-Wahaibi LH, Amer AA, Marzouk AA, Gomaa HAM, Youssif BGM, Abdelhamid AA.	Pharmaceuticals (Basel)	10.3390/ph14050399	2021
Enzymology	Identification of a marine Bacillus strain C5 and parathion-methyl degradation characteristics of the extracellular esterase B1.	Hao J, Liu J, Sun M.	Biomed Res Int	10.1155/2014/863094	2014
Genetics	Comparative Genomic Analysis of Bacillus amyloliquefaciens and Bacillus subtilis Reveals Evolutional Traits for Adaptation to Plant-Associated Habitats.	Zhang N, Yang D, Kendall JR, Borriss R, Druzhinina IS, Kubicek CP, Shen Q, Zhang R.	Front Microbiol	10.3389/fmicb.2016.02039	2016
Genetics	A Combinatorial Kin Discrimination System in Bacillus subtilis.	Lyons NA, Kraigher B, Stefanic P, Mandic-Mulec I, Kolter R.	Curr Biol	10.1016/j.cub.2016.01.032	2016
	Macrotermycins A-D, Glycosylated Macrolactams from a Termite-Associated Amycolatopsis sp. M39.	Beemelmanns C, Ramadhar TR, Kim KH, Klassen JL, Cao S, Wyche TP, Hou Y, Poulsen M, Bugni TS, Currie CR, Clardy J.	Org Lett	10.1021/acs.orglett.6b03831	2017
	Structural revision of sesbagrandiflorains A and B, and synthesis and biological evaluation of 6-methoxy-2-arylbenzofuran derivatives.	Noviany N, Samadi A, Carpenter EL, Abugrain ME, Hadi S, Purwitasari N, Indra G, Indra A, Mahmud T.	J Nat Med	10.1007/s11418-020-01445-2	2021
	Synthesis, Antimicrobial, and Antibiofilm Activities of Some Novel 7-Methoxyquinoline Derivatives Bearing Sulfonamide Moiety against Urinary Tract Infection-Causing Pathogenic Microbes.	Ghorab MM, M Soliman A, El-Sayyad GS, Abdel-Kader MS, El-Batal AI.	Int J Mol Sci	10.3390/ijms24108933	2023
	Assessment of genetic diversity of Bacillus spp. isolated from eutrophic fish culture pond.	Sen R, Tripathy S, Padhi SK, Mohanty S, Maiti NK.	3 Biotech	10.1007/s13205-014-0234-9	2015
	Molecular modeling studies and in vitro screening of dihydrorugosaflavonoid and its derivatives against Mycobacterium tuberculosis.	Puranik NV, Srivastava P, Swami S, Choudhari A, Sarkar D.	RSC Adv	10.1039/c8ra00636a	2018
Pathogenicity	Disruption of Autolysis in Bacillus subtilis using TiO₂ Nanoparticles.	McGivney E, Han L, Avellan A, VanBriesen J, Gregory KB.	Sci Rep	10.1038/srep44308	2017
	Recent Advances in Discovery, Bioengineering, and Bioactivity-Evaluation of Ribosomally Synthesized and Post-translationally Modified Peptides.	Zhong G, Wang ZJ, Yan F, Zhang Y, Huo L.	ACS Bio Med Chem Au	10.1021/acsbiomedchemau.2c00062	2023
	Heronapyrrole D: A case of co-inspiration of natural product biosynthesis, total synthesis and biodiscovery.	Schmidt J, Khalil Z, Capon RJ, Stark CB.	Beilstein J Org Chem	10.3762/bjoc.10.121	2014
	Chemical Composition, Antimicrobial and Antitumor Potentiality of Essential Oil of Ferula tingitana L. Apiaceae Grow in Libya.	Elghwaji W, El-Sayed AM, El-Deeb KS, ElSayed AM.	Pharmacogn Mag	10.4103/pm.pm_323_15	2017
	Undecaprenyl diphosphate synthase inhibitors: antibacterial drug leads.	Sinko W, Wang Y, Zhu W, Zhang Y, Feixas F, Cox CL, Mitchell DA, Oldfield E, McCammon JA.	J Med Chem	10.1021/jm5004649	2014
	Natural Cyclic Peptides as an Attractive Modality for Therapeutics: A Mini Review.	Abdalla MA, McGaw LJ.	Molecules	10.3390/molecules23082080	2018
	Plant antibacterials: The challenges and opportunities.	Berida TI, Adekunle YA, Dada-Adegbola H, Kdimy A, Roy S, Sarker SD.	Heliyon	10.1016/j.heliyon.2024.e31145	2024
	Oxidative DNA cleavage mediated by a new unexpected [Pd(BAPP)][PdCl₄] complex (BAPP = 1,4-bis(3-aminopropyl)piperazine): crystal structure, DNA binding and cytotoxic behavior.	Ragab MS, Shehata MR, Shoukry MM, Haukka M, Ragheb MA.	RSC Adv	10.1039/d1ra07793g	2022
	Fusarium culmorum affects expression of biofilm formation key genes in Bacillus subtilis.	Khezri M, Jouzani GS, Ahmadzadeh M.	Braz J Microbiol	10.1016/j.bjm.2015.11.019	2016
	Probiotic Bacillus cereus Strains, a Potential Risk for Public Health in China.	Zhu K, Holzel CS, Cui Y, Mayer R, Wang Y, Dietrich R, Didier A, Bassitta R, Martlbauer E, Ding S.	Front Microbiol	10.3389/fmicb.2016.00718	2016
Metabolism	Surface-bound reactive oxygen species generating nanozymes for selective antibacterial action.	Gao F, Shao T, Yu Y, Xiong Y, Yang L.	Nat Commun	10.1038/s41467-021-20965-3	2021
	An Unusual Diterpene-Enhygromic Acid and Deoxyenhygrolides from a Marine Myxobacterium, Enhygromyxa sp.	Tomura T, Nagashima S, Yamazaki S, Iizuka T, Fudou R, Ojika M.	Mar Drugs	10.3390/md15040109	2017
Metabolism	Bornlisy Attenuates Colitis-Associated Colorectal Cancer via Inhibiting GPR43-Mediated Glycolysis.	Lu X, Qiao S, Peng C, Yan W, Xu Z, Qu J, Hou Y, Zhao S, Chen P, Wang T.	Front Nutr	10.3389/fnut.2021.706382	2021
	A Robust Metatranscriptomic Technology for Population-Scale Studies of Diet, Gut Microbiome, and Human Health.	Hatch A, Horne J, Toma R, Twibell BL, Somerville KM, Pelle B, Canfield KP, Genkin M, Banavar G, Perlina A, Messier H, Klitgord N, Vuyisich M.	Int J Genomics	10.1155/2019/1718741	2019
	Acetylcholinesterase-Inhibition and Antibacterial Activity of Mondia whitei Adventitious Roots and Ex vitro-Grown Somatic Embryogenic-Biomass.	Baskaran P, Kumari A, Ncube B, Van Staden J.	Front Pharmacol	10.3389/fphar.2016.00335	2016
Pathogenicity	Tulbaghia violacea and Allium ursinum Extracts Exhibit Anti-Parasitic and Antimicrobial Activities.	Krstin S, Sobeh M, Braun MS, Wink M.	Molecules	10.3390/molecules23020313	2018
	The spatial architecture of Bacillus subtilis biofilms deciphered using a surface-associated model and in situ imaging.	Bridier A, Bridier A, Le Coq D, Dubois-Brissonnet F, Thomas V, Aymerich S, Briandet R.	PLoS One	10.1371/journal.pone.0016177	2011
	Evaluation of microalgae and cyanobacteria as potential sources of antimicrobial compounds.	Alsenani F, Tupally KR, Chua ET, Eltanahy E, Alsufyani H, Parekh HS, Schenk PM.	Saudi Pharm J	10.1016/j.jsps.2020.11.010	2020
Pathogenicity	Calcium and Magnesium Ions Are Membrane-Active against Stationary-Phase Staphylococcus aureus with High Specificity.	Xie Y, Yang L.	Sci Rep	10.1038/srep20628	2016
Enzymology	Improved recovery of Bacillus spores from nonporous surfaces with cotton swabs over foam, nylon, or polyester, and the role of hydrophilicity of cotton in governing the recovery efficiency.	Thomas P, Mujawar MM, Upreti R, Sekhar AC.	Appl Environ Microbiol	10.1128/aem.02626-12	2013
Metabolism	Secondary Metabolites of the Genus Amycolatopsis: Structures, Bioactivities and Biosynthesis.	Song Z, Xu T, Wang J, Hou Y, Liu C, Liu S, Wu S.	Molecules	10.3390/molecules26071884	2021
Pathogenicity	Prevalence and predictors of prior antibacterial use among patients presenting to hospitals in Northern Uganda.	Ocan M, Manabe YC, Baluku H, Atukwase E, Ogwal-Okeng J, Obua C.	BMC Pharmacol Toxicol	10.1186/s40360-015-0027-8	2015
	Ecological and Phytochemical Studies on Euphorbia retusa (Forssk.) from Egyptian Habitat.	Shaaban M, Ali M, Tala MF, Hamed A, Hassan AZ.	J Anal Methods Chem	10.1155/2018/9143683	2018
Pathogenicity	Alteramide B is a microtubule antagonist of inhibiting Candida albicans.	Ding Y, Li Y, Li Z, Zhang J, Lu C, Wang H, Shen Y, Du L.	Biochim Biophys Acta	10.1016/j.bbagen.2016.06.025	2016
Genetics	Bacterial Endospores as Phage Genome Carriers and Protective Shells.	Gabiatti N, Yu P, Mathieu J, Lu GW, Wang X, Zhang H, Soares HM, Alvarez PJJ.	Appl Environ Microbiol	10.1128/aem.01186-18	2018
	Biochemical Activities of Iranian Cymbopogon olivieri (Boiss) Bor. Essential Oil.	Mahboubi M, Kazempour N.	Indian J Pharm Sci	10.4103/0250-474x.107071	2012
Pathogenicity	Bacterial Cell Growth Inhibitors Targeting Undecaprenyl Diphosphate Synthase and Undecaprenyl Diphosphate Phosphatase.	Wang Y, Desai J, Zhang Y, Malwal SR, Shin CJ, Feng X, Sun H, Liu G, Guo RT, Oldfield E.	ChemMedChem	10.1002/cmdc.201600342	2016
	Anti-infective and cytotoxic properties of Bupleurum marginatum.	Ashour ML, El-Readi MZ, Hamoud R, Eid SY, El Ahmady SH, Nibret E, Herrmann F, Youns M, Tahrani A, Kaufmann D, Wink M.	Chin Med	10.1186/1749-8546-9-4	2014
Metabolism	Sorbicillinoid-Based Metabolites from a Sponge-Derived Fungus Trichoderma saturnisporum.	Meng J, Cheng W, Heydari H, Wang B, Zhu K, Konuklugil B, Lin W.	Mar Drugs	10.3390/md16070226	2018
	Bacillus subtilis pellicle formation proceeds through genetically defined morphological changes.	Kobayashi K.	J Bacteriol	10.1128/jb.00157-07	2007
	Evaluation of Antimicrobial and Anti-Biofilm Formation Activities of Novel Poly(vinyl alcohol) Hydrogels Reinforced with Crosslinked Chitosan and Silver Nano-Particles.	Alfuraydi RT, Alminderej FM, Mohamed NA.	Polymers (Basel)	10.3390/polym14081619	2022
Metabolism	Metabolic engineering of Bacillus subtilis for terpenoid production.	Guan Z, Xue D, Abdallah II, Dijkshoorn L, Setroikromo R, Lv G, Quax WJ.	Appl Microbiol Biotechnol	10.1007/s00253-015-6950-1	2015
	Exploiting rRNA operon copy number to investigate bacterial reproductive strategies.	Roller BR, Stoddard SF, Schmidt TM.	Nat Microbiol	10.1038/nmicrobiol.2016.160	2016
	Assessment and verification of commercially available pressure cookers for laboratory sterilization.	Swenson VA, Stacy AD, Gaylor MO, Ushijima B, Philmus B, Cozy LM, Videau NM, Videau P.	PLoS One	10.1371/journal.pone.0208769	2018
	Investigation of the Antibacterial Activity and in vivo Cytotoxicity of Biogenic Silver Nanoparticles as Potent Therapeutics.	Hossain MM, Polash SA, Takikawa M, Shubhra RD, Saha T, Islam Z, Hossain S, Hasan MA, Takeoka S, Sarker SR.	Front Bioeng Biotechnol	10.3389/fbioe.2019.00239	2019
	Structures and Biological Activities of Diketopiperazines from Marine Organisms: A Review.	Song Z, Hou Y, Yang Q, Li X, Wu S.	Mar Drugs	10.3390/md19080403	2021
	Bacterial Acclimation Inside an Aqueous Battery.	Dong D, Chen B, Chen P.	PLoS One	10.1371/journal.pone.0129130	2015
Biotechnology	Metagenomic Insights and Genomic Analysis of Phosphogypsum and Its Associated Plant Endophytic Microbiomes Reveals Valuable Actors for Waste Bioremediation.	Ben Mefteh F, Bouket AC, Daoud A, Luptakova L, Alenezi FN, Gharsallah N, Belbahri L.	Microorganisms	10.3390/microorganisms7100382	2019
Enzymology	New Haloterpenes from the Marine Red Alga Laurencia papillosa: Structure Elucidation and Biological Activity.	Shaaban M, Abou-El-Wafa GSE, Golz C, Laatsch H.	Mar Drugs	10.3390/md19010035	2021
	Chemical composition, antibacterial activity and action mechanism of different extracts from hawthorn (Crataegus pinnatifida Bge.).	Zhang LL, Zhang LF, Xu JG.	Sci Rep	10.1038/s41598-020-65802-7	2020
Pathogenicity	Myticalins: A Novel Multigenic Family of Linear, Cationic Antimicrobial Peptides from Marine Mussels (Mytilus spp.).	Leoni G, De Poli A, Mardirossian M, Gambato S, Florian F, Venier P, Wilson DN, Tossi A, Pallavicini A, Gerdol M.	Mar Drugs	10.3390/md15080261	2017
	Antimicrobial Potential of Food Lactic Acid Bacteria: Bioactive Peptide Decrypting from Caseins and Bacteriocin Production.	Nebbia S, Lamberti C, Lo Bianco G, Cirrincione S, Laroute V, Cocaign-Bousquet M, Cavallarin L, Giuffrida MG, Pessione E.	Microorganisms	10.3390/microorganisms9010065	2020
	Chemical Composition, Antioxidant, DNA Damage Protective, Cytotoxic and Antibacterial Activities of Cyperus rotundus Rhizomes Essential Oil against Foodborne Pathogens.	Hu QP, Cao XM, Hao DL, Zhang LL.	Sci Rep	10.1038/srep45231	2017
	Design, Synthesis, and Antimicrobial Evaluation of Novel Pyrazoles and Pyrazolyl 1,3,4-Thiadiazine Derivatives.	Radini IAM.	Molecules	10.3390/molecules23092092	2018
	High Counts and Anthracene Degradation Ability of Streptococcus mutans and Veillonella parvula Isolated From the Oral Cavity of Cigarette Smokers and Non-smokers.	Moussa HA, Wasfi R, Abdeltawab NF, Megahed SA.	Front Microbiol	10.3389/fmicb.2021.661509	2021
	Small Schiff Base Molecules-A Possible Strategy to Combat Biofilm-Related Infections.	Coanda M, Limban C, Nuta DC.	Antibiotics (Basel)	10.3390/antibiotics13010075	2024
	Synthesis of Some New Folic Acid-Based Heterocycles of Anticipated Biological Activity.	Abu Ali OA, Saad HA, Al Malki BMA.	Molecules	10.3390/molecules26020368	2021
Metabolism	DegU and Spo0A jointly control transcription of two loci required for complex colony development by Bacillus subtilis.	Verhamme DT, Murray EJ, Stanley-Wall NR.	J Bacteriol	10.1128/jb.01236-08	2009
	How Fermentation Affects the Antioxidant Properties of Cereals and Legumes.	Verni M, Verardo V, Rizzello CG.	Foods	10.3390/foods8090362	2019
	The Long-Term Effect of a Nine Amino-Acid Antimicrobial Peptide AS-hepc3_(48-56) Against Pseudomonas aeruginosa With No Detectable Resistance.	Zhu D, Chen F, Chen YC, Peng H, Wang KJ.	Front Cell Infect Microbiol	10.3389/fcimb.2021.752637	2021
Enzymology	LysPBC2, a Novel Endolysin Harboring a Bacillus cereus Spore Binding Domain.	Kong M, Na H, Ha NC, Ryu S.	Appl Environ Microbiol	10.1128/aem.02462-18	2019
	Characterization of a Newly Isolated Probiotic Strain from Oecophylla smaragdina, an Edible Insect Popular Among the Indigenous Communities of Northeast India.	Borah D, Gogoi P, Agarwal D, Khataniar A.	Indian J Microbiol	10.1007/s12088-018-0758-5	2019
	Antimicrobial, Anthelmintic Activities and Characterisation of Functional Phenolic Acids of Achyranthes aspera Linn.: A Medicinal Plant Used for the Treatment of Wounds and Ringworm in East Africa.	Ndhlala AR, Ghebrehiwot HM, Ncube B, Aremu AO, Gruz J, Subrtova M, Dolezal K, du Plooy CP, Abdelgadir HA, Van Staden J.	Front Pharmacol	10.3389/fphar.2015.00274	2015
Metabolism	Production of the polyketide 6-deoxyerythronolide B in the heterologous host Bacillus subtilis.	Kumpfmuller J, Methling K, Fang L, Pfeifer BA, Lalk M, Schweder T.	Appl Microbiol Biotechnol	10.1007/s00253-015-6990-6	2016
	Chemoenzymatic synthesis of daptomycin analogs active against daptomycin-resistant strains.	Scull EM, Bandari C, Johnson BP, Gardner ED, Tonelli M, You J, Cichewicz RH, Singh S.	Appl Microbiol Biotechnol	10.1007/s00253-020-10790-x	2020
	Antimicrobial and selected in vitro enzyme inhibitory effects of leaf extracts, flavonols and indole alkaloids isolated from Croton menyharthii.	Aderogba MA, Ndhlala AR, Rengasamy KR, Van Staden J.	Molecules	10.3390/molecules181012633	2013
	A polymeric approach toward resistance-resistant antimicrobial agent with dual-selective mechanisms of action.	Bai S, Wang J, Yang K, Zhou C, Xu Y, Song J, Gu Y, Chen Z, Wang M, Shoen C, Andrade B, Cynamon M, Zhou K, Wang H, Cai Q, Oldfield E, Zimmerman SC, Bai Y, Feng X.	Sci Adv	10.1126/sciadv.abc9917	2021
	Fluoroquinolone-derived fluorescent probes for studies of bacterial penetration and efflux.	Stone MRL, Masi M, Phetsang W, Pages JM, Cooper MA, Blaskovich MAT.	Medchemcomm	10.1039/c9md00124g	2019
	Motility, Chemotaxis and Aerotaxis Contribute to Competitiveness during Bacterial Pellicle Biofilm Development.	Holscher T, Bartels B, Lin YC, Gallegos-Monterrosa R, Price-Whelan A, Kolter R, Dietrich LEP, Kovacs AT.	J Mol Biol	10.1016/j.jmb.2015.06.014	2015
	Antimicrobial activity of some pentacyclic triterpenes and their synthesized 3-O-lipophilic chains.	Mallavadhani UV, Mahapatra A, Jamil K, Reddy PS.	Biol Pharm Bull	10.1248/bpb.27.1576	2004
Metabolism	Candida albicans mucin Msb2 is a broad-range protectant against antimicrobial peptides.	Swidergall M, Ernst AM, Ernst JF.	Antimicrob Agents Chemother	10.1128/aac.00862-13	2013
	Deleting multiple lytic genes enhances biomass yield and production of recombinant proteins by Bacillus subtilis.	Wang Y, Chen Z, Zhao R, Jin T, Zhang X, Chen X.	Microb Cell Fact	10.1186/s12934-014-0129-9	2014
	Multipurpose peptides: The venoms of Amazonian stinging ants contain anthelmintic ponericins with diverse predatory and defensive activities.	Nixon SA, Robinson SD, Agwa AJ, Walker AA, Choudhary S, Touchard A, Undheim EAB, Robertson A, Vetter I, Schroeder CI, Kotze AC, Herzig V, King GF.	Biochem Pharmacol	10.1016/j.bcp.2021.114693	2021
	Elucidation of the Teixobactin Pharmacophore.	Yang H, Chen KH, Nowick JS.	ACS Chem Biol	10.1021/acschembio.6b00295	2016
Pathogenicity	Applications of Fruit Polyphenols and Their Functionalized Nanoparticles Against Foodborne Bacteria: A Mini Review.	Kumar H, Bhardwaj K, Cruz-Martins N, Nepovimova E, Oleksak P, Dhanjal DS, Bhardwaj S, Singh R, Chopra C, Verma R, Chauhan PP, Kumar D, Kuca K.	Molecules	10.3390/molecules26113447	2021
	Effectiveness of Ultraviolet-C Light and a High-Level Disinfection Cabinet for Decontamination of N95 Respirators.	Cadnum JL, Li DF, Redmond SN, John AR, Pearlmutter B, Donskey CJ.	Pathog Immun	10.20411/pai.v5i1.372	2020
	The experience of teaching introductory programming skills to bioscientists in Brazil.	Zuvanov L, Basso Garcia AL, Correr FH, Bizarria R, Filho APDC, da Costa AH, Thomaz AT, Pinheiro ALM, Riano-Pachon DM, Winck FV, Esteves FG, Margarido GRA, Casagrande GMS, Frajacomo HC, Martins L, Cavalheiro MF, Grachet NG, da Silva RGC, Cerri R, Ramos RTJ, Medeiros SDS, Tavares TV, Correa Dos Santos RA.	PLoS Comput Biol	10.1371/journal.pcbi.1009534	2021
	Inactivation of bacterial biothreat agents in water, a review.	Rose LJ, Rice EW.	J Water Health	10.2166/wh.2014.038	2014
	Antimicrobial and Antioxidant Activities of Pycnocycla spinosa Extracts.	Mahboubi M, Taghizadeh M, Kazempour N.	Jundishapur J Nat Pharm Prod	10.17795/jjnpp-13859	2014
	Aspirin-Based Organoiron Dendrimers as Promising Anti-Inflammatory, Anticancer, and Antimicrobial Drugs.	Abd-El-Aziz AS, Benaaisha MR, Abdelghani AA, Bissessur R, Abdel-Rahman LH, Fayez AM, El-Ezz DA.	Biomolecules	10.3390/biom11111568	2021
Enzymology	Current Status and Future Prospects of Marine Natural Products (MNPs) as Antimicrobials.	Choudhary A, Naughton LM, Montanchez I, Dobson ADW, Rai DK.	Mar Drugs	10.3390/md15090272	2017
	Comparison study on antioxidant, DNA damage protective and antibacterial activities of eugenol and isoeugenol against several foodborne pathogens.	Zhang LL, Zhang LF, Xu JG, Hu QP.	Food Nutr Res	10.1080/16546628.2017.1353356	2017
	Exploring the potentials of halophilic prokaryotes from a solar saltern for synthesizing nanoparticles: The case of silver and selenium.	Abdollahnia M, Makhdoumi A, Mashreghi M, Eshghi H.	PLoS One	10.1371/journal.pone.0229886	2020
	Extracellular heme recycling and sharing across species by novel mycomembrane vesicles of a Gram-positive bacterium.	Wang M, Nie Y, Wu XL.	ISME J	10.1038/s41396-020-00800-1	2021
Metabolism	SigmaX is involved in controlling Bacillus subtilis biofilm architecture through the AbrB homologue Abh.	Murray EJ, Strauch MA, Stanley-Wall NR.	J Bacteriol	10.1128/jb.00618-09	2009
Enzymology	Isolation, characterization, kinetics, and enzymatic and nonenzymatic microbicidal activities of a novel c-type lysozyme from plasma of Schistocerca gregaria (Orthoptera: Acrididae).	Elmogy M, Bassal TT, Yousef HA, Dorrah MA, Mohamed AA, Duvic B.	J Insect Sci	10.1093/jisesa/iev038	2015
Pathogenicity	In Vitro efficacy of antimicrobial extracts against the atypical ruminant pathogen Mycoplasma mycoides subsp. capri.	Arjoon AV, Saylor CV, May M.	BMC Complement Altern Med	10.1186/1472-6882-12-169	2012
Enzymology	Crystallization and preliminary X-ray analysis of an arabinoxylan arabinofuranohydrolase from Bacillus subtilis.	Vandermarliere E, Bourgois TM, Van Campenhout S, Strelkov SV, Volckaert G, Delcour JA, Courtin CM, Rabijns A.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309107033702	2007
	Identification, Bioactivity, and Productivity of Actinomycins from the Marine-Derived Streptomyces heliomycini.	Wang D, Wang C, Gui P, Liu H, Khalaf SMH, Elsayed EA, Wadaan MAM, Hozzein WN, Zhu W.	Front Microbiol	10.3389/fmicb.2017.01147	2017
	The Role of Enterococcus faecium as a Key Producer and Fermentation Condition as an Influencing Factor in Tyramine Accumulation in Cheonggukjang.	Park YK, Jin YH, Lee JH, Byun BY, Lee J, Jeong KC, Mah JH.	Foods	10.3390/foods9070915	2020
	X-ray crystallographic structure of a teixobactin analogue reveals key interactions of the teixobactin pharmacophore.	Yang H, Du Bois DR, Ziller JW, Nowick JS.	Chem Commun (Camb)	10.1039/c7cc00783c	2017
Pathogenicity	Phylotype-Level Characterization of Complex Communities of Lactobacilli Using a High-Throughput, High-Resolution Phenylalanyl-tRNA Synthetase (pheS) Gene Amplicon Sequencing Approach.	Silvaraju S, Menon N, Fan H, Lim K, Kittelmann S.	Appl Environ Microbiol	10.1128/aem.02191-20	2020
Pathogenicity	Structure, Function, and Inhibition of Staphylococcus aureus Heptaprenyl Diphosphate Synthase.	Desai J, Liu YL, Wei H, Liu W, Ko TP, Guo RT, Oldfield E.	ChemMedChem	10.1002/cmdc.201600311	2016
Pathogenicity	THCz: Small molecules with antimicrobial activity that block cell wall lipid intermediates.	Reithuber E, Wixe T, Ludwig KC, Muller A, Uvell H, Grein F, Lindgren AEG, Muschiol S, Nannapaneni P, Eriksson A, Schneider T, Normark S, Henriques-Normark B, Almqvist F, Mellroth P.	Proc Natl Acad Sci U S A	10.1073/pnas.2108244118	2021
Biotechnology	Antibiotics from Extremophilic Micromycetes.	Baranova AA, Alferova VA, Korshun VA, Tyurin AP.	Russ J Bioorg Chem	10.1134/s1068162020060023	2020
	Utility of 2-thioxo-pyrido[2,3-d]pyrimidinone in synthesis of pyridopyrimido[2,1-b][1,3,5]-thiadiazinones and pyridopyrimido[2,1-b][1,3]thiazinones as antimicrobial agents.	Zaki YH, Gomha SM, Mohamed AMG.	Chem Cent J	10.1186/s13065-017-0286-0	2017
Metabolism	Metabolites from Marine Microorganisms, Micro, and Macroalgae: Immense Scope for Pharmacology.	Barzkar N, Tamadoni Jahromi S, Poorsaheli HB, Vianello F.	Mar Drugs	10.3390/md17080464	2019
	Effect of drying on the bioactive compounds, antioxidant, antibacterial and antityrosinase activities of pomegranate peel.	Mphahlele RR, Fawole OA, Makunga NP, Opara UL.	BMC Complement Altern Med	10.1186/s12906-016-1132-y	2016
	Antimicrobial activity of puffball(Bovistella radicata) and separation of bioactive compounds.	Ye Y, Liu K, Zeng Q, Zeng Q.	AMB Express	10.1186/s13568-017-0402-5	2017
Metabolism	Cacolides: Sesterterpene Butenolides from a Southern Australian Marine Sponge, Cacospongia sp.	Khushi S, Nahar L, Salim AA, Capon RJ.	Mar Drugs	10.3390/md16110456	2018
Metabolism	Environmental Consortium Containing Pseudomonas and Bacillus Species Synergistically Degrades Polyethylene Terephthalate Plastic.	Roberts C, Edwards S, Vague M, Leon-Zayas R, Scheffer H, Chan G, Swartz NA, Mellies JL.	mSphere	10.1128/msphere.01151-20	2020
Metabolism	Lipopolysaccharide-affinity copolymer senses the rapid motility of swarmer bacteria to trigger antimicrobial drug release.	Lu S, Bi W, Du Q, Sinha S, Wu X, Subrata A, Bhattacharjya S, Xing B, Yeow EKL.	Nat Commun	10.1038/s41467-018-06729-6	2018
	Talaropeptides A-D: Structure and Biosynthesis of Extensively N-methylated Linear Peptides From an Australian Marine Tunicate-Derived Talaromyces sp.	Dewapriya P, Khalil ZG, Prasad P, Salim AA, Cruz-Morales P, Marcellin E, Capon RJ.	Front Chem	10.3389/fchem.2018.00394	2018
	Phytochemical Profiles and Antimicrobial Activities of Allium cepa Red cv. and A. sativum Subjected to Different Drying Methods: A Comparative MS-Based Metabolomics.	Farag MA, Ali SE, Hodaya RH, El-Seedi HR, Sultani HN, Laub A, Eissa TF, Abou-Zaid FOF, Wessjohann LA.	Molecules	10.3390/molecules22050761	2017
Biotechnology	Microbial valorization of underutilized and nonconventional waste streams.	Lad BC, Coleman SM, Alper HS.	J Ind Microbiol Biotechnol	10.1093/jimb/kuab056	2022
Enzymology	Genome sequence and analysis of a broad-host range lytic bacteriophage that infects the Bacillus cereus group.	El-Arabi TF, Griffiths MW, She YM, Villegas A, Lingohr EJ, Kropinski AM.	Virol J	10.1186/1743-422x-10-48	2013
Pathogenicity	Antimicrobial activities of hexane extract and decussatin from stembark extract of Ficus congensis.	Alaribe CS, Shode F, Coker HA, Ayoola G, Sunday A, Singh N, Iwuanyanwu S.	Int J Mol Sci	10.3390/ijms12042750	2011
	Eco-friendly synthesis, physicochemical studies, biological assay and molecular docking of steroidal oxime-ethers.	Alam M, Lee DU.	EXCLI J	10.17179/excli2014-675	2015
Pathogenicity	Reprofiled anthelmintics abate hypervirulent stationary-phase Clostridium difficile.	Gooyit M, Janda KD.	Sci Rep	10.1038/srep33642	2016
Pathogenicity	Chemical composition and antibacterial activity of Gongronema latifolium.	Eleyinmi AF.	J Zhejiang Univ Sci B	10.1631/jzus.2007.b0352	2007
	Interaction of the gelsolin-derived antibacterial PBP 10 peptide with lipid bilayers and cell membranes.	Bucki R, Janmey PA.	Antimicrob Agents Chemother	10.1128/aac.00134-06	2006
Metabolism	Enzymatic hydrolysis of trilactone siderophores: where chiral recognition occurs in enterobactin and bacillibactin iron transport.	Abergel RJ, Zawadzka AM, Hoette TM, Raymond KN.	J Am Chem Soc	10.1021/ja903051q	2009
	Pharmacological Potential of Lathyrane-Type Diterpenoids from Phytochemical Sources.	Vela F, Ezzanad A, Hunter AC, Macias-Sanchez AJ, Hernandez-Galan R.	Pharmaceuticals (Basel)	10.3390/ph15070780	2022
	Role of Cationic Side Chains in the Antimicrobial Activity of C18G.	Kohn EM, Shirley DJ, Arotsky L, Picciano AM, Ridgway Z, Urban MW, Carone BR, Caputo GA.	Molecules	10.3390/molecules23020329	2018
	Total phenolic, total flavonoids, antioxidant and antimicrobial activities of scrophularia striata boiss extracts.	Mahboubi M, Kazempour N, Boland Nazar AR.	Jundishapur J Nat Pharm Prod		2013
Metabolism	Proteolytic activation of human pancreatitis-associated protein is required for peptidoglycan binding and bacterial aggregation.	Medveczky P, Szmola R, Sahin-Toth M.	Biochem J	10.1042/bj20090005	2009
	Myoviridae phage PDX kills enteroaggregative Escherichia coli without human microbiome dysbiosis.	Cepko LCS, Garling EE, Dinsdale MJ, Scott WP, Bandy L, Nice T, Faber-Hammond J, Mellies JL.	J Med Microbiol	10.1099/jmm.0.001162	2020
	Antioxidative, Antiproliferative and Antimicrobial Activities of Phenolic Compounds from Three Myrcia Species.	Dos Santos C, Galaverna RS, Angolini CFF, Nunes VVA, de Almeida LFR, Ruiz ALTG, de Carvalho JE, Duarte RMT, Duarte MCT, Eberlin MN.	Molecules	10.3390/molecules23050986	2018
Pathogenicity	Bacteriophage PBC1 and its endolysin as an antimicrobial agent against Bacillus cereus.	Kong M, Ryu S.	Appl Environ Microbiol	10.1128/aem.03485-14	2015
	Chlorine dioxide against bacteria and yeasts from the alcoholic fermentation.	Meneghin SP, Reis FC, de Almeida PG, Ceccato-Antonini SR.	Braz J Microbiol	10.1590/s1517-838220080002000026	2008
Enzymology	Bacillus subtilis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase revisited: resolution of two long-standing enigmas.	Wu J, Sheflyan GY, Woodard RW.	Biochem J	10.1042/bj20050294	2005
Metabolism	Escherichia coli NemA is an efficient chromate reductase that can be biologically immobilized to provide a cell free system for remediation of hexavalent chromium.	Robins KJ, Hooks DO, Rehm BH, Ackerley DF.	PLoS One	10.1371/journal.pone.0059200	2013
	Novel FR-900493 Analogues That Inhibit the Outgrowth of Clostridium difficile Spores.	Mitachi K, Yun HG, Kurosu SM, Eslamimehr S, Lemieux MR, Klaic L, Clemons WM, Kurosu M.	ACS Omega	10.1021/acsomega.7b01740	2018
Pathogenicity	Discovery of Lipophilic Bisphosphonates That Target Bacterial Cell Wall and Quinone Biosynthesis.	Malwal SR, Chen L, Hicks H, Qu F, Liu W, Shillo A, Law WX, Zhang J, Chandnani N, Han X, Zheng Y, Chen CC, Guo RT, AbdelKhalek A, Seleem MN, Oldfield E.	J Med Chem	10.1021/acs.jmedchem.8b01878	2019
	A comparison of the antimicrobial activity and toxicity of six combretum and two terminalia species from southern Africa.	Cock IE, Van Vuuren SF.	Pharmacogn Mag	10.4103/0973-1296.149740	2015
Metabolism	Coregulation of Terpenoid Pathway Genes and Prediction of Isoprene Production in Bacillus subtilis Using Transcriptomics.	Hess BM, Xue J, Markillie LM, Taylor RC, Wiley HS, Ahring BK, Linggi B.	PLoS One	10.1371/journal.pone.0066104	2013
	Discovery of a New Natural Product and a Deactivation of a Quorum Sensing System by Culturing a "Producer" Bacterium With a Heat-Killed "Inducer" Culture.	Liang L, Sproule A, Haltli B, Marchbank DH, Berrue F, Overy DP, McQuillan K, Lanteigne M, Duncan N, Correa H, Kerr RG.	Front Microbiol	10.3389/fmicb.2018.03351	2018
Metabolism	Optically-controlled bacterial metabolite for cancer therapy.	Zheng DW, Chen Y, Li ZH, Xu L, Li CX, Li B, Fan JX, Cheng SX, Zhang XZ.	Nat Commun	10.1038/s41467-018-03233-9	2018
Phylogeny	Biosensor for detection of antibiotic resistant Staphylococcus bacteria.	Guntupalli R, Sorokulova I, Olsen E, Globa L, Pustovyy O, Vodyanoy V.	J Vis Exp	10.3791/50474	2013
	Enhancing antidiabetic and antimicrobial performance of Ocimum basilicum, and Ocimum sanctum (L.) using silver nanoparticles.	Malapermal V, Botha I, Krishna SBN, Mbatha JN.	Saudi J Biol Sci	10.1016/j.sjbs.2015.06.026	2017
	Kirenol production in hairy root culture of Siegesbeckea orientalis and its antimicrobial activity.	Wang JP, Zhou YM, Zhang YH.	Pharmacogn Mag	10.4103/0973-1296.96569	2012
	Hetero-Diels-Alder reaction of 1,3-bis(trimethylsilyloxy)-1,3-butadienes with arylsulfonylcyanides. Synthesis and antimicrobial activity of 4-hydroxy-2-(arylsulfonyl)pyridines.	Hussain I, Yawer MA, Lalk M, Lindequist U, Villinger A, Fischer C, Langer P.	Bioorg Med Chem	10.1016/j.bmc.2008.10.033	2008
	Selection-driven accumulation of suppressor mutants in bacillus subtilis: the apparent high mutation frequency of the cryptic gudB gene and the rapid clonal expansion of gudB(+) suppressors are due to growth under selection.	Gunka K, Stannek L, Care RA, Commichau FM.	PLoS One	10.1371/journal.pone.0066120	2013
Metabolism	Biofilm formation by Bacillus cereus is influenced by PlcR, a pleiotropic regulator.	Hsueh YH, Somers EB, Lereclus D, Wong AC.	Appl Environ Microbiol	10.1128/aem.00573-06	2006
	Red light activates the sigmaB-mediated general stress response of Bacillus subtilis via the energy branch of the upstream signaling cascade.	Avila-Perez M, van der Steen JB, Kort R, Hellingwerf KJ.	J Bacteriol	10.1128/jb.00826-09	2010
	Charge-transfer interaction of drug quinidine with quinol, picric acid and DDQ: Spectroscopic characterization and biological activity studies towards understanding the drug-receptor mechanism.	Eldaroti HH, Gadir SA, Refat MS, Adam AMA.	J Pharm Anal	10.1016/j.jpha.2013.06.003	2014
Enzymology	Sensitive and selective culture medium for detection of environmental Clostridium difficile isolates without requirement for anaerobic culture conditions.	Cadnum JL, Hurless KN, Deshpande A, Nerandzic MM, Kundrapu S, Donskey CJ.	J Clin Microbiol	10.1128/jcm.00793-14	2014
	The Anti- and Pro-Tumorigenic Role of Microbiota and Its Role in Anticancer Therapeutic Strategies.	Greco G, Zeppa SD, Agostini D, Attisani G, Stefanelli C, Ferrini F, Sestili P, Fimognari C.	Cancers (Basel)	10.3390/cancers15010190	2022
	Antibacterial, antioxidant and tyrosinase-inhibition activities of pomegranate fruit peel methanolic extract.	Fawole OA, Fawole OA, Makunga NP, Opara UL.	BMC Complement Altern Med	10.1186/1472-6882-12-200	2012
	A Methyl 4-Oxo-4-phenylbut-2-enoate with in Vivo Activity against MRSA that Inhibits MenB in the Bacterial Menaquinone Biosynthesis Pathway.	Matarlo JS, Lu Y, Daryaee F, Daryaee T, Ruzsicska B, Walker SG, Tonge PJ.	ACS Infect Dis	10.1021/acsinfecdis.6b00023	2016
Metabolism	Isolation of a new natural product and cytotoxic and antimicrobial activities of extracts from fungi of Indonesian marine habitats.	Tarman K, Lindequist U, Wende K, Porzel A, Arnold N, Wessjohann LA.	Mar Drugs	10.3390/md9030294	2011
Metabolism	Characterization of a Bacillus subtilis transporter for petrobactin, an anthrax stealth siderophore.	Zawadzka AM, Kim Y, Maltseva N, Nichiporuk R, Fan Y, Joachimiak A, Raymond KN.	Proc Natl Acad Sci U S A	10.1073/pnas.0904793106	2009
	Biocontrol of tomato wilt disease by Bacillus subtilis isolates from natural environments depends on conserved genes mediating biofilm formation.	Chen Y, Yan F, Chai Y, Liu H, Kolter R, Losick R, Guo JH.	Environ Microbiol	10.1111/j.1462-2920.2012.02860.x	2013
Metabolism	Short-Term Nitrogen Fertilization Affects Microbial Community Composition and Nitrogen Mineralization Functions in an Agricultural Soil.	Ouyang Y, Norton JM.	Appl Environ Microbiol	10.1128/aem.02278-19	2020
Enzymology	Diversity and function of the Antarctic krill microorganisms from Euphausia superba.	Cui X, Zhu G, Liu H, Jiang G, Wang Y, Zhu W.	Sci Rep	10.1038/srep36496	2016
	Guanidine-Containing Polyhydroxyl Macrolides: Chemistry, Biology, and Structure-Activity Relationship.	Song X, Yuan G, Li P, Cao S.	Molecules	10.3390/molecules24213913	2019
Phylogeny	Molecular characterization and identification of Bacillus clausii Strains marketed for use in oral bacteriotherapy.	Senesi S, Celandroni F, Tavanti A, Ghelardi E.	Appl Environ Microbiol	10.1128/aem.67.2.834-839.2001	2001
	Intertidal marine sediment harbours Actinobacteria with promising bioactive and biosynthetic potential.	Jose PA, Jha B.	Sci Rep	10.1038/s41598-017-09672-6	2017
Metabolism	Discovery and Biochemical Characterization of PlyP56, PlyN74, and PlyTB40-Bacillus Specific Endolysins.	Etobayeva I, Linden SB, Alem F, Harb L, Rizkalla L, Mosier PD, Johnson AA, Temple L, Hakami RM, Nelson DC.	Viruses	10.3390/v10050276	2018
Pathogenicity	Lacticin 3147, a broad-spectrum bacteriocin which selectively dissipates the membrane potential.	McAuliffe O, Ryan MP, Ross RP, Hill C, Breeuwer P, Abee T.	Appl Environ Microbiol	10.1128/aem.64.2.439-445.1998	1998
	Black Elder and Its Constituents: Molecular Mechanisms of Action Associated with Female Reproduction.	Kolesarova A, Baldovska S, Kohut L, Sirotkin AV.	Pharmaceuticals (Basel)	10.3390/ph15020239	2022
Pathogenicity	Effects of fractionation and combinatorial evaluation of Tamarindus indica fractions for antibacterial activity.	Nwodo UU, Iroegbu CU, Ngene AA, Chigor VN, Okoh AI.	Molecules	10.3390/molecules16064818	2011
Phylogeny	Lactic acid microflora of the gut of snail Cornu aspersum.	Koleva Z, Dedov I, Kizheva J, Lipovanska R, Moncheva P, Hristova P.	Biotechnol Biotechnol Equip	10.1080/13102818.2014.947071	2014
	The paratransgenic sand fly: a platform for control of Leishmania transmission.	Hurwitz I, Hillesland H, Fieck A, Das P, Durvasula R.	Parasit Vectors	10.1186/1756-3305-4-82	2011
	Tracing the domestication of a biofilm-forming bacterium.	McLoon AL, Guttenplan SB, Kearns DB, Kolter R, Losick R.	J Bacteriol	10.1128/jb.01542-10	2011
Enzymology	Enhanced control of cucumber wilt disease by Bacillus amyloliquefaciens SQR9 by altering the regulation of Its DegU phosphorylation.	Xu Z, Zhang R, Wang D, Qiu M, Feng H, Zhang N, Shen Q.	Appl Environ Microbiol	10.1128/aem.03943-13	2014
Enzymology	Hypocoprins A-C: new sesquiterpenoids from the coprophilous fungus Hypocopra rostrata.	Jayanetti DR, Yue Q, Bills GF, Gloer JB.	J Nat Prod	10.1021/np5007718	2015
	Stilbenoids: A Natural Arsenal against Bacterial Pathogens.	Mattio LM, Catinella G, Dallavalle S, Pinto A.	Antibiotics (Basel)	10.3390/antibiotics9060336	2020
Pathogenicity	Isoprenoid Biosynthesis Inhibitors Targeting Bacterial Cell Growth.	Desai J, Wang Y, Wang K, Malwal SR, Oldfield E.	ChemMedChem	10.1002/cmdc.201600343	2016
Pathogenicity	Mutations in respiratory complex I promote antibiotic persistence through alterations in intracellular acidity and protein synthesis.	Van den Bergh B, Schramke H, Michiels JE, Kimkes TEP, Radzikowski JL, Schimpf J, Vedelaar SR, Burschel S, Dewachter L, Loncar N, Schmidt A, Meijer T, Fauvart M, Friedrich T, Michiels J, Heinemann M.	Nat Commun	10.1038/s41467-022-28141-x	2022
Enzymology	Hymenopsins A and B and a macrophorin analogue from a fungicolous Hymenopsis sp.	Schmidt LE, Deyrup ST, Baltrusaitis J, Swenson DC, Wicklow DT, Gloer JB.	J Nat Prod	10.1021/np900613d	2010
Pathogenicity	Shornephine A: structure, chemical stability, and P-glycoprotein inhibitory properties of a rare diketomorpholine from an Australian marine-derived Aspergillus sp.	Khalil ZG, Huang XC, Raju R, Piggott AM, Capon RJ.	J Org Chem	10.1021/jo501501z	2014
Enzymology	Structure-function analysis of Staphylococcus aureus amidase reveals the determinants of peptidoglycan recognition and cleavage.	Buttner FM, Zoll S, Nega M, Gotz F, Stehle T.	J Biol Chem	10.1074/jbc.m114.557306	2014
	Synbiotics and Their Antioxidant Properties, Mechanisms, and Benefits on Human and Animal Health: A Narrative Review.	Mounir M, Ibijbijen A, Farih K, Rabetafika HN, Razafindralambo HL.	Biomolecules	10.3390/biom12101443	2022
Phylogeny	Species differentiation of a diverse suite of Bacillus spores by mass spectrometry-based protein profiling.	Dickinson DN, La Duc MT, Haskins WE, Gornushkin I, Winefordner JD, Powell DH, Venkateswaran K.	Appl Environ Microbiol	10.1128/aem.70.1.475-482.2004	2004
Phylogeny	Bispyrrolidinoindoline Epi(poly)thiodioxopiperazines (BPI-ETPs) and Simplified Mimetics: Structural Characterization, Bioactivities, and Total Synthesis.	Martinez C, Garcia-Dominguez P, Alvarez R, de Lera AR.	Molecules	10.3390/molecules27217585	2022
Enzymology	Altenuene derivatives from an unidentified freshwater fungus in the family Tubeufiaceae.	Jiao P, Gloer JB, Campbell J, Shearer CA.	J Nat Prod	10.1021/np0504661	2006
	Defining the mode of action of tetramic acid antibacterials derived from Pseudomonas aeruginosa quorum sensing signals.	Lowery CA, Park J, Gloeckner C, Meijler MM, Mueller RS, Boshoff HI, Ulrich RL, Barry CE, Bartlett DH, Kravchenko VV, Kaufmann GF, Janda KD.	J Am Chem Soc	10.1021/ja9056079	2009
	Mechanism of MenE inhibition by acyl-adenylate analogues and discovery of novel antibacterial agents.	Matarlo JS, Evans CE, Sharma I, Lavaud LJ, Ngo SC, Shek R, Rajashankar KR, French JB, Tan DS, Tonge PJ.	Biochemistry	10.1021/acs.biochem.5b00966	2015
	Design and synthesis of anti-MRSA benzimidazolylbenzene-sulfonamides. QSAR studies for prediction of antibacterial activity.	Gonzalez-Chavez MM, Mendez F, Martinez R, Perez-Gonzalez C, Martinez-Gutierrez F.	Molecules	10.3390/molecules16010175	2010
Enzymology	Proximity ligation assays with peptide conjugate 'burrs' for the sensitive detection of spores.	Pai S, Ellington AD, Levy M.	Nucleic Acids Res	10.1093/nar/gni150	2005
Pathogenicity	Microbial regulation in gorgonian corals.	Hunt LR, Smith SM, Downum KR, Mydlarz LD.	Mar Drugs	10.3390/md10061225	2012
Biotechnology	Validation of the One Broth One Plate for Salmonella Method for Detection of Salmonella Spp. in Select Food and Environmental Samples: AOAC Performance Tested MethodSM 102002.	Alles S, Roman B, Le QN, Kurteu M, Elmerhebi E, Potter C, Mozola M, Thompson W, Bastin B, Donofrio R.	J AOAC Int	10.1093/jaoacint/qsaa149	2021
Enzymology	Domain analysis of a modular alpha-L-Arabinofuranosidase with a unique carbohydrate binding strategy from the fiber-degrading bacterium Fibrobacter succinogenes S85.	Yoshida S, Hespen CW, Beverly RL, Mackie RI, Cann IK.	J Bacteriol	10.1128/jb.00503-10	2010
Pathogenicity	Gentamicin improves the activities of daptomycin and vancomycin against Enterococcus faecalis in vitro and in an experimental foreign-body infection model.	Furustrand Tafin U, Majic I, Zalila Belkhodja C, Betrisey B, Corvec S, Zimmerli W, Trampuz A.	Antimicrob Agents Chemother	10.1128/aac.00141-11	2011
	Cationic Substitutions in Hydroxyapatite: Current Status of the Derived Biofunctional Effects and Their In Vitro Interrogation Methods.	Tite T, Popa AC, Balescu LM, Bogdan IM, Pasuk I, Ferreira JMF, Stan GE.	Materials (Basel)	10.3390/ma11112081	2018
Metabolism	Functional domains of the 50S subunit mature late in the assembly process.	Jomaa A, Jomaa A, Jain N, Davis JH, Williamson JR, Britton RA, Ortega J.	Nucleic Acids Res	10.1093/nar/gkt1295	2014
	Suspended Materials in River Waters Differentially Enrich Class 1 Integron- and IncP-1 Plasmid-Carrying Bacteria in Sediments.	De la Cruz Barron M, Merlin C, Guilloteau H, Montarges-Pelletier E, Bellanger X.	Front Microbiol	10.3389/fmicb.2018.01443	2018
Enzymology	Sensitive and Specific Recombinase Polymerase Amplification Assays for Fast Screening, Detection, and Identification of Bacillus anthracis in a Field Setting.	Bentahir M, Ambroise J, Delcorps C, Pilo P, Gala JL.	Appl Environ Microbiol	10.1128/aem.00506-18	2018
Enzymology	Desensitization of Bacillus subtilis aspartokinase I to allosteric inhibition by meso-diaminopimelate allows aspartokinase I to function in amino acid biosynthesis during exponential growth.	Zhang JJ, Paulus H.	J Bacteriol	10.1128/jb.172.8.4690-4693.1990	1990
Genetics	Synthetic spike-in standards for high-throughput 16S rRNA gene amplicon sequencing.	Tourlousse DM, Yoshiike S, Ohashi A, Matsukura S, Noda N, Sekiguchi Y.	Nucleic Acids Res	10.1093/nar/gkw984	2017
	Alepidea amatymbica Eckl. & Zeyh.: A Review of Its Traditional Uses, Phytochemistry, Pharmacology, and Toxicology.	Wintola OA, Afolayan AJ.	Evid Based Complement Alternat Med	10.1155/2014/284517	2014
Enzymology	Agreement, precision, and accuracy of epifluorescence microscopy methods for enumeration of total bacterial numbers.	Seo EY, Ahn TS, Zo YG.	Appl Environ Microbiol	10.1128/aem.01724-09	2010
Metabolism	An inhibitory compound produced by a soil isolate of Rhodococcus has strong activity against the veterinary pathogen R. equi.	Ward AL, Reddyvari P, Borisova R, Shilabin AG, Lampson BC.	PLoS One	10.1371/journal.pone.0209275	2018
	Self-Driven "Microfiltration" Enabled by Porous Superabsorbent Polymer (PSAP) Beads for Biofluid Specimen Processing and Storage.	Chen W, Wang T, Dou Z, Xie X.	ACS Mater Lett	10.1021/acsmaterialslett.0c00348	2020
	Stable isotope ratios and forensic analysis of microorganisms.	Kreuzer-Martin HW, Jarman KH.	Appl Environ Microbiol	10.1128/aem.02906-06	2007
Pathogenicity	Geminal dialkyl derivatives of N-substituted pantothenamides: synthesis and antibacterial activity.	Akinnusi TO, Vong K, Auclair K.	Bioorg Med Chem	10.1016/j.bmc.2011.02.053	2011
	Dustborne and airborne Gram-positive and Gram-negative bacteria in high versus low ERMI homes.	Adhikari A, Kettleson EM, Vesper S, Kumar S, Popham DL, Schaffer C, Indugula R, Chatterjee K, Allam KK, Grinshpun SA, Reponen T.	Sci Total Environ	10.1016/j.scitotenv.2014.02.110	2014
	Development of antibiotics and the future of marine microorganisms to stem the tide of antibiotic resistance.	Kasanah N, Hamann MT.	Curr Opin Investig Drugs		2004
Enzymology	The Cytosolic Oligosaccharide-Degrading Proteome of Butyrivibrio Proteoclasticus.	Dunne JC, Kelly WJ, Leahy SC, Li D, Bond JJ, Peng L, Attwood GT, Jordan TW.	Proteomes	10.3390/proteomes3040347	2015
	Cell division of cycle of Bacillus subtilis: evidence of variability in period D.	Holmes M, Rickert M, Pierucci O.	J Bacteriol	10.1128/jb.142.1.254-261.1980	1980
Metabolism	The tmRNA ribosome-rescue system.	Janssen BD, Hayes CS.	Adv Protein Chem Struct Biol	10.1016/b978-0-12-386497-0.00005-0	2012
	Molecular cloning and sequencing of a major Bacillus subtilis autolysin gene.	Kuroda A, Sekiguchi J.	J Bacteriol	10.1128/jb.173.22.7304-7312.1991	1991
	Bioactive constituents from Harpephyllum caffrum Bernh. and Rhus coriaria L.	Shabana MM, El Sayed AM, Yousif MF, El Sayed AM, Sleem AA.	Pharmacogn Mag	10.4103/0973-1296.90410	2011
Enzymology	Rapid detection of enterohemorrhagic Escherichia coli by real-time PCR with fluorescent hybridization probes.	Bellin T, Pulz M, Matussek A, Hempen HG, Gunzer F.	J Clin Microbiol	10.1128/jcm.39.1.370-374.2001	2001
	UV-induced crosslinks in the 16S rRNAs of Escherichia coli, Bacillus subtilis and Thermus aquaticus and their implications for ribosome structure and photochemistry.	Noah JW, Shapkina T, Wollenzien P.	Nucleic Acids Res	10.1093/nar/28.19.3785	2000
Metabolism	Cold shock response of Bacillus subtilis: isoleucine-dependent switch in the fatty acid branching pattern for membrane adaptation to low temperatures.	Klein W, Weber MH, Marahiel MA.	J Bacteriol	10.1128/jb.181.17.5341-5349.1999	1999
Enzymology	Characterization of growth and acid formation in a Bacillus subtilis pyruvate kinase mutant.	Fry B, Zhu T, Domach MM, Koepsel RR, Phalakornkule C, Ataai MM.	Appl Environ Microbiol	10.1128/aem.66.9.4045-4049.2000	2000
	Bioactive Marine Xanthones: A Review.	Soares JX, Loureiro DRP, Dias AL, Reis S, Pinto MMM, Afonso CMM.	Mar Drugs	10.3390/md20010058	2022
	Propagating Bacillus subtilis spores in a liquid medium for the Guthrie bioassay.	Sinor M.	J Clin Microbiol	10.1128/jcm.11.6.740-742.1980	1980
Metabolism	Identification of a helix-turn-helix motif of Bacillus thermoglucosidasius HrcA essential for binding to the CIRCE element and thermostability of the HrcA-CIRCE complex, indicating a role as a thermosensor.	Hitomi M, Nishimura H, Tsujimoto Y, Matsui H, Watanabe K.	J Bacteriol	10.1128/jb.185.1.381-385.2003	2003
Enzymology	The Validation of the Sample6 DETECT^TM HT/L for AOAC Research Institute.	Banerjee K, Peirson B, Hu C, Carrier E, Malsick L, Tarasova Y, Daudenarde S, Brownell D, Koeris M, Klass N, Bird P, Benzinger MJ, Agin J, Goins D.	J AOAC Int	10.5740/jaoacint.17-0484	2018
Enzymology	Emerging peptide antibiotics with therapeutic potential.	Upert G, Luther A, Obrecht D, Ermert P.	Med Drug Discov	10.1016/j.medidd.2020.100078	2021
Enzymology	Optimal DNA isolation method for detection of bacteria in clinical specimens by broad-range PCR.	Rantakokko-Jalava K, Jalava J.	J Clin Microbiol	10.1128/jcm.40.11.4211-4217.2002	2002
	2'-O-Methylation within Bacterial RNA Acts as Suppressor of TLR7/TLR8 Activation in Human Innate Immune Cells.	Rimbach K, Kaiser S, Helm M, Dalpke AH, Eigenbrod T.	J Innate Immun	10.1159/000375460	2015
Metabolism	In vivo modification of native carrier protein domains.	Mercer AC, Meier JL, Torpey JW, Burkart MD.	Chembiochem	10.1002/cbic.200800838	2009
	[Control of medication in chemotherapy. Examination of the urine for antibacterial activity].	Ansorg R.	Dtsch Med Wochenschr	10.1055/s-2008-1069219	1984
	Structures, Activities and Drug-Likeness of Anti-Infective Xanthone Derivatives Isolated from the Marine Environment: A Review.	Loureiro DRP, Soares JX, Costa JC, Magalhaes AF, Azevedo CMG, Pinto MMM, Afonso CMM.	Molecules	10.3390/molecules24020243	2019
Pathogenicity	Multitarget drug discovery for tuberculosis and other infectious diseases.	Li K, Schurig-Briccio LA, Feng X, Upadhyay A, Pujari V, Lechartier B, Fontes FL, Yang H, Rao G, Zhu W, Gulati A, No JH, Cintra G, Bogue S, Liu YL, Molohon K, Orlean P, Mitchell DA, Freitas-Junior L, Ren F, Sun H, Jiang T, Li Y, Guo RT, Cole ST, Gennis RB, Crick DC, Oldfield E.	J Med Chem	10.1021/jm500131s	2014
Enzymology	Aspartokinase III, a new isozyme in Bacillus subtilis 168.	Graves LM, Switzer RL.	J Bacteriol	10.1128/jb.172.1.218-223.1990	1990
Metabolism	Appearance of spore coat protein in the cell extracts of Bacillus subtilis asporogenic mutants.	Uchida A, Kadota H, Schaeffer P.	J Bacteriol	10.1128/jb.126.3.1342-1343.1976	1976
	Comparative study of pressure-induced germination of Bacillus subtilis spores at low and high pressures.	Wuytack EY, Boven S, Michiels CW.	Appl Environ Microbiol	10.1128/aem.64.9.3220-3224.1998	1998
Metabolism	Immense essence of excellence: marine microbial bioactive compounds.	Bhatnagar I, Kim SK.	Mar Drugs	10.3390/md8102673	2010
Metabolism	Gram-negative bacteria produce membrane vesicles which are capable of killing other bacteria.	Li Z, Clarke AJ, Beveridge TJ.	J Bacteriol	10.1128/jb.180.20.5478-5483.1998	1998
	The diversity of anti-microbial secondary metabolites produced by fungal endophytes: an interdisciplinary perspective.	Mousa WK, Raizada MN.	Front Microbiol	10.3389/fmicb.2013.00065	2013
Enzymology	Kipukasins, nucleoside derivatives from Aspergillus versicolor.	Jiao P, Mudur SV, Gloer JB, Wicklow DT.	J Nat Prod	10.1021/np070241l	2007
	Transposon mutagenesis of the plant-associated Bacillus amyloliquefaciens ssp. plantarum FZB42 revealed that the nfrA and RBAM17410 genes are involved in plant-microbe-interactions.	Budiharjo A, Chowdhury SP, Dietel K, Beator B, Dolgova O, Fan B, Bleiss W, Ziegler J, Schmid M, Hartmann A, Borriss R.	PLoS One	10.1371/journal.pone.0098267	2014
	Fiber-structured material in a fraction of Bacillus subtilis.	Hiragi Y, Kadota H.	J Bacteriol	10.1128/jb.108.1.579-581.1971	1971
Enzymology	PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida strains.	Yamamoto S, Harayama S.	Appl Environ Microbiol	10.1128/aem.61.3.1104-1109.1995	1995
Metabolism	Relation between cell wall turnover and cell growth in Bacillus subtilis.	Glaser L, Lindsay B.	J Bacteriol	10.1128/jb.130.2.610-619.1977	1977
Enzymology	Decaspirones A-E, bioactive spirodioxynaphthalenes from the freshwater aquatic fungus Decaisnella thyridioides.	Jiao P, Swenson DC, Gloer JB, Campbell J, Shearer CA.	J Nat Prod	10.1021/np060385k	2006
Enzymology	Utilization of the rpoB gene as a specific chromosomal marker for real-time PCR detection of Bacillus anthracis.	Qi Y, Patra G, Liang X, Williams LE, Rose S, Redkar RJ, DelVecchio VG.	Appl Environ Microbiol	10.1128/aem.67.8.3720-3727.2001	2001
Pathogenicity	Bactericidal action of nalidixic acid on Bacillus subtilis.	Cook TM, Brown KG, Boyle JV, Goss WA.	J Bacteriol	10.1128/jb.92.5.1510-1514.1966	1966
Pathogenicity	The antifungal protein from Aspergillus giganteus causes membrane permeabilization.	Theis T, Wedde M, Meyer V, Stahl U.	Antimicrob Agents Chemother	10.1128/aac.47.2.588-593.2003	2003
	[Clinical studies of histidinemia (author's transl)].	Anakura M.	Hokkaido Igaku Zasshi		1981
	Evaluation of the Urotest AB antibacterial substance detection test.	Blondeau JM, Yaschuk Y, Galenzoski D, Hrabok D, Isaacson M, Lee L, Link H, Walshaw L.	J Clin Pathol	10.1136/jcp.47.11.1047	1994
Metabolism	Disulfide bond formation and cysteine exclusion in gram-positive bacteria.	Daniels R, Mellroth P, Bernsel A, Neiers F, Normark S, von Heijne G, Henriques-Normark B.	J Biol Chem	10.1074/jbc.m109.081398	2010
	A Novel Method for Continuous Determination of the Intracellular pH in Bacteria with the Internally Conjugated Fluorescent Probe 5 (and 6-)-Carboxyfluorescein Succinimidyl Ester.	Breeuwer P, Drocourt J, Rombouts FM, Abee T.	Appl Environ Microbiol	10.1128/aem.62.1.178-183.1996	1996
Metabolism	The permeability of the wall fabric of Escherichia coli and Bacillus subtilis.	Demchick P, Koch AL.	J Bacteriol	10.1128/jb.178.3.768-773.1996	1996
Pathogenicity	Application of a dense gas technique for sterilizing soft biomaterials.	Karajanagi SS, Yoganathan R, Mammucari R, Park H, Cox J, Zeitels SM, Langer R, Foster NR.	Biotechnol Bioeng	10.1002/bit.23105	2011
Metabolism	Changes in penicillin-binding proteins during sporulation of Bacillus subtilis.	Sowell MO, Buchanan CE.	J Bacteriol	10.1128/jb.153.3.1331-1337.1983	1983
Metabolism	Revisiting quorum sensing: Discovery of additional chemical and biological functions for 3-oxo-N-acylhomoserine lactones.	Kaufmann GF, Sartorio R, Lee SH, Rogers CJ, Meijler MM, Moss JA, Clapham B, Brogan AP, Dickerson TJ, Janda KD.	Proc Natl Acad Sci U S A	10.1073/pnas.0408639102	2005
	Supply-Side Analysis of Growth of Bacillus subtilis on Glucose-Citrate Medium: Feasible Network Alternatives and Yield Optimality.	Lee J, Goel A, Ataai MM, Domach MM.	Appl Environ Microbiol	10.1128/aem.63.2.710-718.1997	1997
Pathogenicity	Mechanism of action and selective toxicity of ascamycin, a nucleoside antibiotic.	Osada H, Isono K.	Antimicrob Agents Chemother	10.1128/aac.27.2.230	1985
	Evaluation of a new cellulose sponge-tipped swab for microbiological sampling: a laboratory and clinical investigation.	Osterblad M, Jarvinen H, Lonnqvist K, Huikko S, Laippala P, Viljanto J, Arvilommi H, Huovinen P.	J Clin Microbiol	10.1128/jcm.41.5.1894-1900.2003	2003
Enzymology	Nature of Escherichia coli cell lysis by culture supernatants of Bacillus species.	Dean CR, Ward OP.	Appl Environ Microbiol	10.1128/aem.57.7.1893-1898.1991	1991
Enzymology	PCR detection of a newly emerged pandemic Vibrio parahaemolyticus O3:K6 pathogen in pure cultures and seeded waters from the Gulf of Mexico.	Myers ML, Panicker G, Bej AK.	Appl Environ Microbiol	10.1128/aem.69.4.2194-2200.2003	2003
Metabolism	Production, purification, sequencing and activity spectra of mutacins D-123.1 and F-59.1.	Nicolas GG, LaPointe G, Lavoie MC.	BMC Microbiol	10.1186/1471-2180-11-69	2011
Enzymology	Molecular cloning of Bacillus sphaericus penicillin V amidase gene and its expression in Escherichia coli and Bacillus subtilis.	Olsson A, Hagstrom T, Nilsson B, Uhlen M, Gatenbeck S.	Appl Environ Microbiol	10.1128/aem.49.5.1084-1089.1985	1985
Pathogenicity	Photodynamic inactivation of Bacillus spores, mediated by phenothiazinium dyes.	Demidova TN, Hamblin MR.	Appl Environ Microbiol	10.1128/aem.71.11.6918-6925.2005	2005
	A comprehensive review on pharmacotherapeutics of herbal bioenhancers.	Dudhatra GB, Mody SK, Awale MM, Patel HB, Modi CM, Kumar A, Kamani DR, Chauhan BN.	ScientificWorldJournal	10.1100/2012/637953	2012
Metabolism	Proteobacterial ArfA peptides are synthesized from non-stop messenger RNAs.	Schaub RE, Poole SJ, Garza-Sanchez F, Benbow S, Hayes CS.	J Biol Chem	10.1074/jbc.m112.374074	2012
	Biological Activity of Recently Discovered Halogenated Marine Natural Products.	Gribble GW.	Mar Drugs	10.3390/md13074044	2015
Metabolism	Detection and quantification of methyl tert-butyl ether-degrading strain PM1 by real-time TaqMan PCR.	Hristova KR, Lutenegger CM, Scow KM.	Appl Environ Microbiol	10.1128/aem.67.11.5154-5160.2001	2001
	Transposition of the arsenate resistance locus of Bacillus subtilis strains 23 and 168.	Adams A.	Genetics	10.1093/genetics/74.2.197	1973
Biotechnology	Medicinal properties and conservation of Pelargonium sidoides DC.	Moyo M, Van Staden J.	J Ethnopharmacol	10.1016/j.jep.2014.01.009	2014
Metabolism	Bacillus anthracis peptidoglycan stimulates an inflammatory response in monocytes through the p38 mitogen-activated protein kinase pathway.	Langer M, Malykhin A, Maeda K, Chakrabarty K, Williamson KS, Feasley CL, West CM, Metcalf JP, Coggeshall KM.	PLoS One	10.1371/journal.pone.0003706	2008
	Asporogeny in Bacillus subtilis associated with development of resistance to actinomycin D.	SLOTNICK IJ.	J Bacteriol	10.1128/jb.78.6.893-895.1959	1959
	Evaluation of counting error due to colony masking in bioaerosol sampling.	Chang CW, Hwang YH, Grinshpun SA, Macher JM, Willeke K.	Appl Environ Microbiol	10.1128/aem.60.10.3732-3738.1994	1994
	Interleukin-8-derived peptide has antibacterial activity.	Bjorstad A, Fu H, Karlsson A, Dahlgren C, Bylund J.	Antimicrob Agents Chemother	10.1128/aac.49.9.3889-3895.2005	2005
Enzymology	Control of lysine biosynthesis in Bacillus subtilis: inhibition of diaminopimelate decarboxylase by lysine.	Rosner A.	J Bacteriol	10.1128/jb.121.1.20-28.1975	1975
Metabolism	Uptake of aminopterin by Bacillus subtilis.	PINE MJ.	J Bacteriol	10.1128/jb.79.6.827-834.1960	1960
	TRANSFORMABLE THYMINE-REQUIRING MUTANT OF BACILLUS SUBTILS.	FARMER JL, ROTHMAN F.	J Bacteriol	10.1128/jb.89.1.262-263.1965	1965
Metabolism	Phylogeny of dissimilatory sulfite reductases supports an early origin of sulfate respiration.	Wagner M, Roger AJ, Flax JL, Brusseau GA, Stahl DA.	J Bacteriol	10.1128/jb.180.11.2975-2982.1998	1998
Pathogenicity	Mechanism and factors influencing the veronal inhibition of bacterial spore germination.	Sierra G, Bowman A.	Appl Microbiol	10.1128/am.17.3.372-378.1969	1969
	Reversal of aminopterin inhibition in Bacillus subtilis at the site of drug entry.	PINE MJ.	J Bacteriol	10.1128/jb.79.6.835-840.1960	1960
	Selective inhibition of initiation of germination of bacterial endospores.	Sierra G.	Appl Microbiol	10.1128/am.16.5.801-802.1968	1968
Metabolism	Dependence of diaminopurine utilization on the mutational site of purine auxotrophy in Bacillus subtilis. 1. Nutritional experiments.	Demain AL, Shigeura HT.	J Bacteriol	10.1128/jb.95.2.565-571.1968	1968
Metabolism	Anti-microbial properties of histone H2A from skin secretions of rainbow trout, Oncorhynchus mykiss.	Fernandes JM, Kemp GD, Molle MG, Smith VJ.	Biochem J	10.1042/bj20020980	2002
Metabolism	Purification and characterization of an extracellular muramidase of Clostridium acetobutylicum ATCC 824 that acts on non-N-acetylated peptidoglycan.	Croux C, Canard B, Goma G, Soucaille P.	Appl Environ Microbiol	10.1128/aem.58.4.1075-1081.1992	1992
Metabolism	Incorporation of formate-C 14 into the pyrimidine moiety of thiamine.	PINE MJ, GUTHRIE R.	J Bacteriol	10.1128/jb.78.4.545-549.1959	1959
	Bacteriophages of Bacillus subtilis.	Hemphill HE, Whiteley HR.	Bacteriol Rev	10.1128/br.39.3.257-315.1975	1975
Enzymology	Glutamine synthetase of Mycobacterium tuberculosis: extracellular release and characterization of its enzymatic activity.	Harth G, Clemens DL, Horwitz MA.	Proc Natl Acad Sci U S A	10.1073/pnas.91.20.9342	1994
Enzymology	An acceptor-dependent polyglycerolphosphate polymerase.	Mauck J, Glaser L.	Proc Natl Acad Sci U S A	10.1073/pnas.69.9.2386	1972
	Use of a Plasmid DNA Probe To Monitor Populations of Bacillus pumilus Inoculant Strains in Hay.	Hendrick CA, Smiley BK, Shelley TH, Tomes NJ.	Appl Environ Microbiol	10.1128/aem.57.3.686-693.1991	1991
Enzymology	Lipiarmycin-resistant ribonucleic acid polymerase mutants of Bacillus subtilis.	Sonenshein AL, Alexander HB, Rothstein DM, Fisher SH.	J Bacteriol	10.1128/jb.132.1.73-79.1977	1977
Metabolism	Distribution of teichoic acid in the cell wall of Bacillus subtilis.	Doyle RJ, McDannel ML, Helman JR, Streips UN.	J Bacteriol	10.1128/jb.122.1.152-158.1975	1975
	Betaine is the main compatible solute of halophilic eubacteria.	Imhoff JF, Rodriguez-Valera F.	J Bacteriol	10.1128/jb.160.1.478-479.1984	1984
	Development of a vital fluorescent staining method for monitoring bacterial transport in subsurface environments.	Fuller ME, Streger SH, Rothmel RK, Mailloux BJ, Hall JA, Onstott TC, Fredrickson JK, Balkwill DL, DeFlaun MF.	Appl Environ Microbiol	10.1128/aem.66.10.4486-4496.2000	2000
Enzymology	Eubacterial components similar to small nuclear ribonucleoproteins: identification of immunoprecipitable proteins and capped RNAs in a cyanobacterium and a gram-positive eubacterium.	Kovacs SA, O'Neil J, Watcharapijarn J, Moe-Kirvan C, Vijay S, Silva V.	J Bacteriol	10.1128/jb.175.7.1871-1878.1993	1993
	Comparison of methods available for assay of chloramphenicol in clinical specimens.	de Louvois J, Mulhall A, Hurley R.	J Clin Pathol	10.1136/jcp.33.6.575	1980
	Genetic Factors in Radiation Resistance of Bacillus subtilis.	Zamenhof S, Bursztyn H, Reddy TK, Zamenhof PJ.	J Bacteriol	10.1128/jb.90.1.108-115.1965	1965
Pathogenicity	Oncorhyncin III: a potent antimicrobial peptide derived from the non-histone chromosomal protein H6 of rainbow trout, Oncorhynchus mykiss.	Fernandes JM, Saint N, Kemp GD, Smith VJ.	Biochem J	10.1042/bj20030259	2003
Enzymology	Biochemical and genetic characterization of a novel enzyme of pentitol metabolism: D-arabitol-phosphate dehydrogenase.	Povelainen M, Eneyskaya EV, Kulminskaya AA, Ivanen DR, Kalkkinen N, Neustroev KN, Miasnikov AN.	Biochem J	10.1042/bj20021096	2003
Enzymology	Detection of Mycobacterium tuberculosis by PCR amplification with pan-Mycobacterium primers and hybridization to an M. tuberculosis-specific probe.	Tevere VJ, Hewitt PL, Dare A, Hocknell P, Keen A, Spadoro JP, Young KK.	J Clin Microbiol	10.1128/jcm.34.4.918-923.1996	1996
Enzymology	Proteases of Clostridium botulinum. V. Studies on the serological relationship between proteases from Clostridium botulinum and other spore-forming bacteria.	Tjaberg TB, Fossum K.	Acta Vet Scand	10.1186/bf03547399	1973
Enzymology	Phospholipase D activity of gram-negative bacteria.	Cole R, Proulx P.	J Bacteriol	10.1128/jb.124.3.1148-1152.1975	1975
Enzymology	Nucleotide-dependent inactivation of RNA polymerase from Bacillus brevis.	Sarkar N, Paulus H.	Proc Natl Acad Sci U S A	10.1073/pnas.69.12.3570	1972
Metabolism	Siderophore-mediated iron acquisition systems in Bacillus cereus: Identification of receptors for anthrax virulence-associated petrobactin .	Zawadzka AM, Abergel RJ, Nichiporuk R, Andersen UN, Raymond KN.	Biochemistry	10.1021/bi8018674	2009
	Molecular cloning, expression, and characterization of endo-beta-1,4-glucanase genes from Bacillus polymyxa and Bacillus circulans.	Baird SD, Johnson DA, Seligy VL.	J Bacteriol	10.1128/jb.172.3.1576-1586.1990	1990
	Light-induced inhibition of sporulation in Bacillus licheniformis.	Propst-Ricciuti C, Lubin LB.	J Bacteriol	10.1128/jb.128.1.506-509.1976	1976
Metabolism	New phage-SPO1-induced polypeptides associated with Bacillus subtilis RNA polymerase.	Fox TD, Pero J.	Proc Natl Acad Sci U S A	10.1073/pnas.71.7.2761	1974
Pathogenicity	D-Tyrosine as a metabolic inhibitor of Bacillus subtilis.	Champney WS, Jensen RA.	J Bacteriol	10.1128/jb.98.1.205-214.1969	1969
Enzymology	PCR detection and quantitation of predominant anaerobic bacteria in human and animal fecal samples.	Wang RF, Cao WW, Cerniglia CE.	Appl Environ Microbiol	10.1128/aem.62.4.1242-1247.1996	1996
	Molecular Cloning and Expression of a Xylanase Gene from Bacillus polymyxa in Escherichia coli.	Yang RC, Mackenzie CR, Bilous D, Seligy VL, Narang SA.	Appl Environ Microbiol	10.1128/aem.54.4.1023-1029.1988	1988
Phylogeny	Characterization of ear fluid isolates of Alloiococcus otitidis from patients with recurrent otitis media.	Bosley GS, Whitney AM, Pruckler JM, Moss CW, Daneshvar M, Sih T, Talkington DF.	J Clin Microbiol	10.1128/jcm.33.11.2876-2880.1995	1995
	A simple and generally applicable procedure for releasing DNA from bacterial cells.	Heath LS, Sloan GL, Heath HE.	Appl Environ Microbiol	10.1128/aem.51.5.1138-1140.1986	1986
Metabolism	Nucleic acid synthesis and ribonucleic acid polymerase specificity in germinating and outgrowing spores of Bacillus subtilis.	Buu A, Sonenshein AL.	J Bacteriol	10.1128/jb.124.1.190-200.1975	1975
Enzymology	Loss of the sigma activity of RNA polymerase of Bacillus subtilis during sporulation.	Linn TG, Greenleaf AL, Shorenstein RG, Losick R.	Proc Natl Acad Sci U S A	10.1073/pnas.70.6.1865	1973
	Phylogenetic analysis of nonthermophilic members of the kingdom crenarchaeota and their diversity and abundance in soils	Buckley DH, Graber JR, Schmidt TM.	Appl Environ Microbiol	10.1128/aem.64.11.4333-4339.1998	1998
Enzymology	Detection of high levels of polyadenylate-containing RNA in bacteria by the use of a single-step RNA isolation procedure.	Gopalakrishna Y, Langley D, Sarkar N.	Nucleic Acids Res	10.1093/nar/9.14.3545	1981
	Prevention of amethopterin inhibition by 2-methyladenine.	LOEBECK ME.	J Bacteriol	10.1128/jb.79.3.384-386.1960	1960
Enzymology	Specific oligonucleotide primers for detection of lecithinase-positive Bacillus spp. by PCR.	Schraft H, Griffiths MW.	Appl Environ Microbiol	10.1128/aem.61.1.98-102.1995	1995
Enzymology	An immunological assay for the sigma subunit of RNA polymerase in extracts of vegetative and sporulating Bacillus subtilis.	Tjian R, Losick R.	Proc Natl Acad Sci U S A	10.1073/pnas.71.7.2872	1974
Enzymology	In vitro synthesis of ribosomal RNA by Bacillus subtilis RNA polymerase.	Hussey C, Pero J, Shorenstein RG, Losick R.	Proc Natl Acad Sci U S A	10.1073/pnas.69.2.407	1972
	Identification of capsule-forming Bacillus anthracis spores with the PCR and a novel dual-probe hybridization format.	Reif TC, Johns M, Pillai SD, Carl M.	Appl Environ Microbiol	10.1128/aem.60.5.1622-1625.1994	1994
Enzymology	Heterotrophic bacteria in an air-handling system.	Hugenholtz P, Fuerst JA.	Appl Environ Microbiol	10.1128/aem.58.12.3914-3920.1992	1992
	Transcriptional enhancement of the Listeria monocytogenes PCR and simple immunoenzymatic assay of the product using anti-RNA:DNA antibodies.	Blais BW.	Appl Environ Microbiol	10.1128/aem.60.1.348-352.1994	1994
Pathogenicity	Myxothiazol, a new antibiotic interfering with respiration.	Thierbach G, Reichenbach H.	Antimicrob Agents Chemother	10.1128/aac.19.4.504	1981
Metabolism	Degradation of uric acid by certain aerobic bacteria.	Rouf MA, Lomprey RF.	J Bacteriol	10.1128/jb.96.3.617-622.1968	1968
Enzymology	Ribonucleic acid polymerase in a thermosensitive sporulation mutant (ts-4) of Bacillus subtilis.	Orrego C, Kerjan P, Manca de Nadra MC, Szulmajster J.	J Bacteriol	10.1128/jb.116.2.636-647.1973	1973
Pathogenicity	Growth stimulation of a strain of Bacillus subtilis by glycine peptides.	DEMAIN AL, HENDLIN D.	J Bacteriol	10.1128/jb.75.1.46-50.1958	1958
Phylogeny	Unrelatedness of Bacillus amyloliquefaciens and Bacillus subtilis.	Welker NE, Campbell LL.	J Bacteriol	10.1128/jb.94.4.1124-1130.1967	1967
	Ultraviolet bactericidal irradiation of ice.	Ladanyi PA, Morrison SM.	Appl Microbiol	10.1128/am.16.3.463-467.1968	1968
Metabolism	Lactose transport in Streptococcus mutans: isolation and characterization of factor IIIlac, a specific protein component of the phosphoenolpyruvate-lactose phosphotransferase system.	Vadeboncoeur C, Proulx M.	Infect Immun	10.1128/iai.46.1.213-219.1984	1984
	Identification of Bacillus anthracis by using monoclonal antibody to cell wall galactose-N-acetylglucosamine polysaccharide.	Ezzell JW, Abshire TG, Little SF, Lidgerding BC, Brown C.	J Clin Microbiol	10.1128/jcm.28.2.223-231.1990	1990
Enzymology	Characterization of a membrane-associated cytidine diphosphate-diacylglycerol-dependent phosphatidylserine synthase in bacilli.	Dutt A, Dowhan W.	J Bacteriol	10.1128/jb.147.2.535-542.1981	1981
Enzymology	Repression of phenolic acid-synthesizing enzymes and its relation to iron uptake in Bacillus subtilis.	Downer DN, Davis WB, Byers BR.	J Bacteriol	10.1128/jb.101.1.181-187.1970	1970
	Arginine regulation of gramicidin S biosynthesis.	Poirier A, Demain AL.	Antimicrob Agents Chemother	10.1128/aac.20.4.508	1981
	PCR primers and probes for the 16S rRNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid.	Greisen K, Loeffelholz M, Purohit A, Leong D.	J Clin Microbiol	10.1128/jcm.32.2.335-351.1994	1994
Enzymology	Inactivation of the phosphoenolpyruvate-dependent phosphotransferase system in various species of bacteria by vinylglycolic acid.	Snyder MA, Kaczorowski GJ, Barnes EM, Walsh C.	J Bacteriol	10.1128/jb.127.1.671-673.1976	1976
Metabolism	Role of teichuronic acid in Bacillus licheniformis: defective autolysis due to deficiency of teichuronic acid in a novobiocin-resistant mutant.	Robson RL, Baddiley J.	J Bacteriol	10.1128/jb.129.2.1051-1058.1977	1977
Metabolism	Biochemical studies of bacterial sporulation and germination. XII. A sulfonic acid as a major sulfur compound of Bacillus subtilis spores.	Bonsen PP, Spudich JA, Nelson DL, Kornberg A.	J Bacteriol	10.1128/jb.98.1.62-68.1969	1969
Pathogenicity	In vitro and in vivo antibacterial activities of DK-507k, a novel fluoroquinolone.	Otani T, Tanaka M, Ito E, Kurosaka Y, Murakami Y, Onodera K, Akasaka T, Sato K.	Antimicrob Agents Chemother	10.1128/aac.47.12.3750-3759.2003	2003
	DISSOCIATION OF SPORE GERMINATION FROM OUTGROWTH BY USE OF AUXOTROPHIC MUTANTS OF BACILLUS SUBTILIS.	Demain AL, Newkirk JF.	J Bacteriol	10.1128/jb.79.6.783-788.1960	1960
Enzymology	Exclusion of induced bacteriophage from cells of a lysogenic Bacillus megaterium committed to sporulation.	Hendry GS, Fitz-James PC.	J Bacteriol	10.1128/jb.118.1.295-303.1974	1974
	Antimicrobial Lipids from Plants and Marine Organisms: An Overview of the Current State-of-the-Art and Future Prospects.	Alves E, Dias M, Lopes D, Almeida A, Domingues MDR, Rey F.	Antibiotics (Basel)	10.3390/antibiotics9080441	2020
Biotechnology	Detection of Salmonella spp. in oysters by PCR.	Bej AK, Mahbubani MH, Boyce MJ, Atlas RM.	Appl Environ Microbiol	10.1128/aem.60.1.368-373.1994	1994
	Comparative antimicrobial activity, in vitro and in vivo, of soft N-chloramine systems and chlorhexidine.	Selk SH, Pogany SA, Higuchi T.	Appl Environ Microbiol	10.1128/aem.43.4.899-904.1982	1982
Pathogenicity	Ultrasonic synergistic effects in liquid-phase chemical sterilization.	Sierra G, Boucher RM.	Appl Microbiol	10.1128/am.22.2.160-164.1971	1971
Enzymology	Regulation of the beta-1,3-glucanase system in Penicillium italicum: glucose repression of the various enzymes.	Santos T, Sanchez M, Villanueva JR, Nombela C.	J Bacteriol	10.1128/jb.133.2.465-471.1978	1978
Enzymology	Comparison of Bacillus thuringiensis with other bacillus species based on enzymoserological examinations of their proteolytic enzymes.	Sandvik O.	Acta Vet Scand	10.1186/bf03547420	1973
Metabolism	Extracellular hemolysins of aerobic sporogenic bacilli.	Bernheimer AW, Grushoff P.	J Bacteriol	10.1128/jb.93.5.1541-1543.1967	1967
	Actinomycin analogues containing pipecolic acid: relationship of structure to biological activity.	Formica JV, Shatkin AJ, Katz E.	J Bacteriol	10.1128/jb.95.6.2139-2150.1968	1968
	Survival of Arthrobacter crystallopoietes during prolonged periods of extreme desiccation.	Boylen CW.	J Bacteriol	10.1128/jb.113.1.33-37.1973	1973
Enzymology	Taxonomic implications of temperature dependence of the allosteric inhibition of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase in Bacillus.	Jensen RA.	J Bacteriol	10.1128/jb.102.2.489-497.1970	1970
	A simple RNA probe system for analysis of Listeria monocytogenes polymerase chain reaction products.	Blais BW, Phillippe LM.	Appl Environ Microbiol	10.1128/aem.59.9.2795-2800.1993	1993
Pathogenicity	Effects of lysine analogs on Penicillium chrysogenum.	Friedrich CG, Demain AL.	Appl Environ Microbiol	10.1128/aem.34.6.706-709.1977	1977
	Evaluation of hybridization characteristics of a cloned pRF106 probe for Listeria monocytogenes detection and development of a nonisotopic colony hybridization assay.	Kim CM, Graves LM, Swaminathan B, Mayer LW, Weaver RE.	Appl Environ Microbiol	10.1128/aem.57.1.289-294.1991	1991
	PCR amplification of the fimA gene sequence of Salmonella typhimurium, a specific method for detection of Salmonella spp.	Cohen HJ, Mechanda SM, Lin W.	Appl Environ Microbiol	10.1128/aem.62.12.4303-4308.1996	1996
Metabolism	Inhibition of protein synthesis by polypeptide antibiotics. I. Inhibition in intact bacteria.	Ennis HL.	J Bacteriol	10.1128/jb.90.4.1102-1108.1965	1965
	Alcohol-soluble protein of microorganisms.	PINE MJ.	J Bacteriol	10.1128/jb.85.2.301-305.1963	1963
Metabolism	Distribution of the phosphoenolpyruvate: glucose phosphotransferase system in bacteria.	Romano AH, Eberhard SJ, Dingle SL, McDowell TD.	J Bacteriol	10.1128/jb.104.2.808-813.1970	1970
Enzymology	Distribution of proteins similar to IIIManH and IIIManL of the Streptococcus salivarius phosphoenolpyruvate:mannose-glucose phosphotransferase system among oral and nonoral bacteria.	Pelletier M, Frenette M, Vadeboncoeur C.	J Bacteriol	10.1128/jb.177.9.2270-2275.1995	1995
	Phage therapy and photodynamic therapy: low environmental impact approaches to inactivate microorganisms in fish farming plants.	Almeida A, Cunha A, Gomes NC, Alves E, Costa L, Faustino MA.	Mar Drugs	10.3390/md7030268	2009
	Pathogenicity of anaerobic gram-positive cocci.	Brook I, Walker RI.	Infect Immun	10.1128/iai.45.2.320-324.1984	1984
	Multigene families for anthracycline antibiotic production in Streptomyces peucetius.	Stutzman-Engwall KJ, Hutchinson CR.	Proc Natl Acad Sci U S A	10.1073/pnas.86.9.3135	1989
Enzymology	Isolation and characterization of genetically engineered gallidermin and epidermin analogs.	Ottenwalder B, Kupke T, Brecht S, Gnau V, Metzger J, Jung G, Gotz F.	Appl Environ Microbiol	10.1128/aem.61.11.3894-3903.1995	1995
	An approach to the measurement of genetic relatedness among organisms.	MCCARTHY BJ, BOLTON ET.	Proc Natl Acad Sci U S A	10.1073/pnas.50.1.156	1963
Metabolism	Pharmacokinetics of ciprofloxacin after oral and parenteral administration.	Hoffken G, Lode H, Prinzing C, Borner K, Koeppe P.	Antimicrob Agents Chemother	10.1128/aac.27.3.375	1985
	Development of a rapid enzyme immunoassay for Clostridium difficile toxin A and its use in the diagnosis of C. difficile-associated disease.	DiPersio JR, Varga FJ, Conwell DL, Kraft JA, Kozak KJ, Willis DH.	J Clin Microbiol	10.1128/jcm.29.12.2724-2730.1991	1991
Enzymology	An assay combining cell culture with reverse transcriptase PCR to detect and determine the infectivity of waterborne Cryptosporidium parvum.	Rochelle PA, Ferguson DM, Handojo TJ, De Leon R, Stewart MH, Wolfe RL.	Appl Environ Microbiol	10.1128/aem.63.5.2029-2037.1997	1997
	Design and testing of a functional group-specific DNA probe for the study of natural populations of acetogenic bacteria.	Lovell CR, Hui Y.	Appl Environ Microbiol	10.1128/aem.57.9.2602-2609.1991	1991
	Structure and morphogenesis of the bacterial spore coat.	Aronson AI, Fitz-James P.	Bacteriol Rev	10.1128/br.40.2.360-402.1976	1976
Metabolism	Transfer RNA as a cofactor coupling amino acid synthesis with that of protein.	Wilcox M, Nirenberg M.	Proc Natl Acad Sci U S A	10.1073/pnas.61.1.229	1968
Pathogenicity	Inhibition of wall autolysis in Streptococcus faecalis by lipoteichoic acid and lipids.	Cleveland RF, Wicken AJ, Daneo-Moore L, Shockman GD.	J Bacteriol	10.1128/jb.126.1.192-197.1976	1976
	The Production, Assay, and Antibiotic Activity of Actidione, an Antiobiotic from Streptomyces griseus.	Whiffen AJ.	J Bacteriol		1948
Pathogenicity	Synergism between penicillin, clindamycin, or metronidazole and gentamicin against species of the Bacteroides melaninogenicus and Bacteroides fragilis groups.	Brook I, Coolbaugh JC, Walker RI, Weiss E.	Antimicrob Agents Chemother	10.1128/aac.25.1.71	1984
Metabolism	Superoxide dismutase and oxygen metabolism in Streptococcus faecalis and comparisons with other organisms.	Britton L, Malinowski DP, Fridovich I.	J Bacteriol	10.1128/jb.134.1.229-236.1978	1978
Pathogenicity	Antibiotic resistance in pathogenic and producing bacteria, with special reference to beta-lactam antibiotics.	Ogawara H.	Microbiol Rev	10.1128/mr.45.4.591-619.1981	1981
Metabolism	Induction by mercuric ion of extensive degradation of cellular ribonucleic acid in Escherichia coli.	Beppu T, Arima K.	J Bacteriol	10.1128/jb.98.3.888-897.1969	1969
	Reexamination of the association between melting point, buoyant density, and chemical base composition of deoxyribonucleic acid.	De Ley J.	J Bacteriol	10.1128/jb.101.3.738-754.1970	1970
	Technology of a regional Guthrie test service.	Newman RL, Starr DJ.	J Clin Pathol	10.1136/jcp.24.6.564	1971
Phylogeny	Peptidoglycan types of bacterial cell walls and their taxonomic implications.	Schleifer KH, Kandler O.	Bacteriol Rev	10.1128/br.36.4.407-477.1972	1972
	Influence of Emulsifying Salts on the Growth of Bacillus thuringiensis CFBP 3476 and Clostridium perfringens ATCC 13124 in Processed Cheese.	Fusieger A, da Silva RR, Cavicchioli VQ, Rodrigues RDS, Honorato JA, de Jesus Silva SR, Pena ML, Caggia C, Nero LA, de Carvalho AF.	Foods	10.3390/foods11203217	2022
	Formulation, Characterization and Properties of Hemp Seed Oil and Its Emulsions.	Mikulcova V, Kasparkova V, Humpolicek P, Bunkova L.	Molecules	10.3390/molecules22050700	2017
Enzymology	Distribution and persistence of Staphylococcus and Micrococcus species and other aerobic bacteria on human skin.	Kloos WE, Musselwhite MS.	Appl Microbiol	10.1128/am.30.3.381-395.1975	1975
	Isolation and selection of indigenous chicken-derived Bacillus subtilis strains as potential probiotic alternatives to antibiotics against Gram-negative enteropathogens.	Phan HV, Pham HHS, Ngo LH, Tran NT, Ho DT, Nguyen KDT, Tran LN, Nguyen HX.	J Adv Vet Anim Res	10.5455/javar.2025.l871	2025
Genetics	A Bacillus subtilis Strain ZJ20 with AFB1 Detoxification Ability: A Comprehensive Analysis.	Huang M, Guo J, Jia Y, Liao C, He L, Li J, Wei Y, Chen S, Chen J, Shang K, Guo R, Ding K, Yu Z.	Biology (Basel)	10.3390/biology12091195	2023
	Characterization of a Plant Growth-Promoting Endohyphal Bacillus subtilis in Fusarium acuminatum from Spiranthes sinensis.	Fang L, Zheng X, Sun Z, Li Y, Deng J, Zhou YI.	Pol J Microbiol	10.33073/pjm-2023-007	2023
	Draft Genome Sequencing of Three Glutaraldehyde-Tolerant Bacteria from Produced Water from Hydraulic Fracturing.	Techtmann SM, Baldwin AL, Aluko D, Andersen J, Becker C, Chandler G, Forgrave S, Jones M, Klasner I, Martini J, Mason N, Parsons R, Peterson N, Reynolds E, Schroeder L.	Microbiol Resour Announc	10.1128/mra.01232-21	2022
	Indigenous cellulolytic aerobic and facultative anaerobic bacterial community enhanced the composting of rice straw and chicken manure with biochar addition.	Zainudin MHM, Singam JT, Sazili AQ, Shirai Y, Hassan MA.	Sci Rep	10.1038/s41598-022-09789-3	2022
	The effect of isolated probiotics from Indonesian Passiflora edulis sims. on interferon gamma levels in peripheral blood mononuclear cell of adult tuberculosis patients in vitro.	Nurrosyidah IH, Mertaniasih NM, Isnaeni I.	J Public Health Afr	10.4081/jphia.2023.2504	2023
	Draft Genome Sequence of Bacillus sp. Strain HY001, a High Producer of Isoprene, Isolated from Natto.	Wang J, Yan M, Li C.	Microbiol Resour Announc	10.1128/mra.01343-19	2020
	Phylogenetically diverse bacteria isolated from tattoo inks, an azo dye-rich environment, decolorize a wide range of azo dyes.	Nho SW, Cui X, Kweon O, Jin J, Chen H, Moon MS, Kim SJ, Cerniglia CE.	Ann Microbiol	10.1186/s13213-021-01648-2	2021
	New Occurrence of Nigrospora oryzae Causing Leaf Blight in Ginkgo biloba in China and Biocontrol Screening of Endophytic Bacteria.	Tao Y, Yang C, Yu S, Fu F, Dai T.	Microorganisms	10.3390/microorganisms12112125	2024
	Biodiversity and Biological Interactions of Actinobacteria Associated with Deep Sea and Intertidal Marine Invertebrates.	Masaki HI, Schneider YK, Franz OH, Hansen EH, Andersen JH, Rama T.	Mar Drugs	10.3390/md23100408	2025
	Nanobacterial Cellulose Production and Its Antibacterial Activity in Biodegradable Poly(vinyl alcohol) Membranes for Food Packaging Applications.	Naik ML, Sajjan AM, M A, Achappa S, Khan TMY, Banapurmath NR, Kalahal PB, Ayachit NH.	ACS Omega	10.1021/acsomega.2c04336	2022
	Diversity of rhizospheric and endophytic bacteria isolated from dried fruit of Ficus carica.	Abid L, Smiri M, Federici E, Lievens B, Manai M, Yan Y, Sadfi-Zouaoui N.	Saudi J Biol Sci	10.1016/j.sjbs.2022.103398	2022
	Effects of Omeprazole on Recurrent Clostridioides difficile Infection Caused by ST81 Strains and Their Potential Mechanisms.	Liu Y, Ma L, Cheng J, Su J.	Antimicrob Agents Chemother	10.1128/aac.00221-23	2023
Genetics	Biotechnologically potential genes in a polysaccharide-degrading epibiont of the Indonesian brown algae Hydroclathrus sp.	Ethica SN, Zilda DS, Oedjijono O, Muhtadi M, Patantis G, Darmawati S, Dewi SS, Sabdono A, Uria AR.	J Genet Eng Biotechnol	10.1186/s43141-023-00461-5	2023
	Draft Genome Sequence of Bacillus sp. Strain BSC154, Isolated from Biological Soil Crust of Moab, Utah.	Bailey AC, Kellom M, Poret-Peterson AT, Noonan K, Hartnett HE, Raymond J.	Genome Announc	10.1128/genomea.01198-14	2014
	An efficient direct screening system for microorganisms that activate plant immune responses based on plant-microbe interactions using cultured plant cells.	Kurokawa M, Nakano M, Kitahata N, Kuchitsu K, Furuya T.	Sci Rep	10.1038/s41598-021-86560-0	2021
	Agronomic advantage of bacterial biological nitrogen fixation on wheat plant growth under contrasting nitrogen and phosphorus regimes.	Aasfar A, Meftah Kadmiri I, Azaroual SE, Lemriss S, Mernissi NE, Bargaz A, Zeroual Y, Hilali A.	Front Plant Sci	10.3389/fpls.2024.1388775	2024
	Bacterial hitchhikers derive benefits from fungal housing.	Venkatesh N, Greco C, Drott MT, Koss MJ, Ludwikoski I, Keller NM, Keller NP.	Curr Biol	10.1016/j.cub.2022.02.017	2022
	The Bristol Sponge Microbiome Collection: A Unique Repository of Deep-Sea Microorganisms and Associated Natural Products.	Williams SE, Stennett HL, Back CR, Tiwari K, Ojeda Gomez J, Challand MR, Hendry KR, Spencer J, Essex-Lopresti AE, Willis CL, Curnow P, Race PR.	Antibiotics (Basel)	10.3390/antibiotics9080509	2020
Enzymology	Cell adsorption and selective desorption for separation of microbial cells by using chitosan-immobilized silica.	Kubota M, Matsui M, Chiku H, Kasashima N, Shimojoh M, Sakaguchi K.	Appl Environ Microbiol	10.1128/aem.71.12.8895-8902.2005	2005
	Bacilli-Mediated Degradation of Xenobiotic Compounds and Heavy Metals.	Arora PK.	Front Bioeng Biotechnol	10.3389/fbioe.2020.570307	2020
	Inhibition of microbial growth by ajoene, a sulfur-containing compound derived from garlic.	Naganawa R, Iwata N, Ishikawa K, Fukuda H, Fujino T, Suzuki A.	Appl Environ Microbiol	10.1128/aem.62.11.4238-4242.1996	1996
	Organic solvent-tolerant bacterium which secretes an organic solvent-stable proteolytic enzyme.	Ogino H, Yasui K, Shiotani T, Ishihara T, Ishikawa H.	Appl Environ Microbiol	10.1128/aem.61.12.4258-4262.1995	1995
	Characterization of the NRPS operon homolog for surfactin A and surfactin C synthesis in Bacillus spp.	Ito K, Adachi M, Matsutani M, Kataoka R, Enomoto G, Kajikawa A, Yokota K.	Arch Microbiol	10.1007/s00203-025-04341-z	2025
	Prenatal versus Postnatal Initial Colonization of Healthy Neonates' Colon Ecosystem by the Enterobacterium Escherichia coli.	Al-Balawi M, Morsy FM.	Microbiol Spectr	10.1128/spectrum.00379-21	2021
Genetics	Genomic characterization and related functional genes of gamma- poly glutamic acid producing Bacillus subtilis.	Zhu J, Wang X, Zhao J, Ji F, Zeng J, Wei Y, Xu L, Dong G, Ma X, Wang C.	BMC Microbiol	10.1186/s12866-024-03262-z	2024
	Enterococcus faecalis Is a Better Competitor Than Other Lactic Acid Bacteria in the Initial Colonization of Colon of Healthy Newborn Babies at First Week of Their Life.	Al-Balawi M, Morsy FM.	Front Microbiol	10.3389/fmicb.2020.02017	2020
	Phage lysis protein Lys^M acts as a wedge to block MurJ conformational changes.	Kohga H, Lertpreedakorn N, Miyazaki R, Wu S, Hosoda K, Tanaka H, Takahashi YS, Yoshikaie K, Kuruma Y, Shigematsu H, Mori T, Tsukazaki T.	Sci Adv	10.1126/sciadv.ady8083	2025
	Prevalence, Diversity and UV-Light Inducibility Potential of Prophages in Bacillus subtilis and Their Possible Roles in Host Properties.	Abraha HB, Choi Y, Hyun W, Lee JW, Kang HS, So MS, Shin D, Jung JH, Sbhatu DB, Kim KP.	Viruses	10.3390/v14030483	2022
	Potential of Bacterial Strains Isolated from Coastal Water for Wastewater Treatment and as Aqua-Feed Additives.	Kim K, Jung JY, Kwon JH.	Microorganisms	10.3390/microorganisms9122441	2021
	Isolation and Characterization of Two New Deoxynivalenol-Degrading Strains, Bacillus sp. HN117 and Bacillus sp. N22.	Li B, Duan J, Ren J, Francis F, Li G.	Toxins (Basel)	10.3390/toxins14110781	2022
	Molecular Networking-Driven Discovery of Antibacterial Perinadines, New Tetracyclic Alkaloids from the Marine Sponge-Derived Fungus Aspergillus sp.	Liu Y, Ding L, Shi Y, Yan X, Wu B, He S.	ACS Omega	10.1021/acsomega.2c00402	2022
	Screening of high-efficiency nitrogen-fixing bacteria from the traditional Chinese medicine plant Astragalus mongolicus and its effect on plant growth promotion and bacterial communities in the rhizosphere.	Shi Z, Guo X, Lei Z, Wang Y, Yang Z, Niu J, Liang J.	BMC Microbiol	10.1186/s12866-023-03026-1	2023
	The Diverse Activities and Mechanisms of the Acylphloroglucinol Antibiotic Rhodomyrtone: Antibacterial Activity and Beyond.	Rani R, Marinho Righetto G, Schafer AB, Wenzel M.	Antibiotics (Basel)	10.3390/antibiotics13100936	2024
	Properties of Poly-gamma-Glutamic Acid Producing-Bacillus Species Isolated From Ogi Liquor and Lemon-Ogi Liquor.	Ajayeoba TA, Dula S, Ijabadeniyi OA.	Front Microbiol	10.3389/fmicb.2019.00771	2019
	PHA-Based Bioplastic: a Potential Alternative to Address Microplastic Pollution.	Acharjee SA, Bharali P, Gogoi B, Sorhie V, Walling B, Alemtoshi.	Water Air Soil Pollut	10.1007/s11270-022-06029-2	2023
	Presence of hydrogen peroxide, a source of hydroxyl radicals, in acid electrolyzed water.	Mokudai T, Nakamura K, Kanno T, Niwano Y.	PLoS One	10.1371/journal.pone.0046392	2012
Transcriptome	Partial rpoB Gene Sequencing Identification and Probiotic Potential of Floricoccus penangensis ML061-4 Isolated from Assam Tea (Camellia sinensis var. assamica).	Rungsirivanich P, Inta A, Tragoolpua Y, Thongwai N.	Sci Rep	10.1038/s41598-019-52979-9	2019
Metabolism	Bioengineering of a Nisin A-producing Lactococcus lactis to create isogenic strains producing the natural variants Nisin F, Q and Z.	Piper C, Hill C, Cotter PD, Ross RP.	Microb Biotechnol	10.1111/j.1751-7915.2010.00207.x	2011
Enzymology	Photometric application of the Gram stain method to characterize natural bacterial populations in aquatic environments.	Saida H, Ytow N, Seki H.	Appl Environ Microbiol	10.1128/aem.64.2.742-747.1998	1998
Enzymology	CDP-2,3-Di-O-geranylgeranyl-sn-glycerol:L-serine O-archaetidyltransferase (archaetidylserine synthase) in the methanogenic archaeon Methanothermobacter thermautotrophicus.	Morii H, Koga Y.	J Bacteriol	10.1128/jb.185.4.1181-1189.2003	2003
Biotechnology	Improved fluorogenic assay for rapid detection of Vibrio parahaemolyticus in foods.	Miyamoto T, Miwa H, Hatano S.	Appl Environ Microbiol	10.1128/aem.56.5.1480-1484.1990	1990
	Sustainable and Scalable Enzymatic Production, Structural Elucidation, And Biological Evaluation of Novel Phlorizin Analogues.	Minsat L, Li Y, Peyrot C, Martinez A, Borie N, Peru A, Godon B, Neve C, Brunissen F, Brunois F, Dosso A, Allais F, Renault JH.	ChemSusChem	10.1002/cssc.202401498	2025
	Pilot market surveillance of GMM contaminations in alpha-amylase food enzyme products: A detection strategy strengthened by a newly developed qPCR method targeting a GM Bacillus licheniformis producing alpha-amylase.	Fraiture MA, Gobbo A, Guillitte C, Marchesi U, Verginelli D, De Greve J, D'aes J, Vanneste K, Papazova N, Roosens NHC.	Food Chem (Oxf)	10.1016/j.fochms.2023.100186	2024
	Phenolic Compounds Extracted from Cherry Tree (Prunus avium) Branches: Impact of the Process on Cosmetic Properties.	Willig G, Brunissen F, Brunois F, Godon B, Magro C, Monteux C, Peyrot C, Ioannou I.	Antioxidants (Basel)	10.3390/antiox11050813	2022
Biotechnology	Understanding the ontogeny and succession of Bacillus velezensis and B. subtilis subsp. subtilis by focusing on kimchi fermentation.	Cho MS, Jin YJ, Kang BK, Park YK, Kim C, Park DS.	Sci Rep	10.1038/s41598-018-25514-5	2018
	Specificity of the AMP-6000 Method for Enumerating Clostridium Endospores in Milk.	Burtscher J, Rudavsky T, Zitz U, Domig KJ.	Foods	10.3390/foods13081192	2024
Metabolism	A sigma factor toolbox for orthogonal gene expression in Escherichia coli.	Bervoets I, Van Brempt M, Van Nerom K, Van Hove B, Maertens J, De Mey M, Charlier D.	Nucleic Acids Res	10.1093/nar/gky010	2018
Phylogeny	Endophytic Bacteria From the Roots of the Medicinal Plant Alkanna tinctoria Tausch (Boraginaceae): Exploration of Plant Growth Promoting Properties and Potential Role in the Production of Plant Secondary Metabolites.	Rat A, Naranjo HD, Krigas N, Grigoriadou K, Maloupa E, Alonso AV, Schneider C, Papageorgiou VP, Assimopoulou AN, Tsafantakis N, Fokialakis N, Willems A.	Front Microbiol	10.3389/fmicb.2021.633488	2021
Metabolism	Genetic and functional characterization of cyclic lipopeptide white-line-inducing principle (WLIP) production by rice rhizosphere isolate Pseudomonas putida RW10S2.	Rokni-Zadeh H, Li W, Sanchez-Rodriguez A, Sinnaeve D, Rozenski J, Martins JC, De Mot R.	Appl Environ Microbiol	10.1128/aem.00335-12	2012
	Novel Conopeptides of Largely Unexplored Indo Pacific Conus sp.	Lebbe EK, Ghequire MG, Peigneur S, Mille BG, Devi P, Ravichandran S, Waelkens E, D'Souza L, De Mot R, Tytgat J.	Mar Drugs	10.3390/md14110199	2016
	Flow Cytometric Single-Cell Identification of Populations in Synthetic Bacterial Communities.	Rubbens P, Props R, Boon N, Waegeman W.	PLoS One	10.1371/journal.pone.0169754	2017
Metabolism	Novel lectin-like bacteriocins of biocontrol strain Pseudomonas fluorescens Pf-5.	Parret AH, Temmerman K, De Mot R.	Appl Environ Microbiol	10.1128/aem.71.9.5197-5207.2005	2005
Metabolism	The antimicrobial compound xantholysin defines a new group of Pseudomonas cyclic lipopeptides.	Li W, Rokni-Zadeh H, De Vleeschouwer M, Ghequire MG, Sinnaeve D, Xie GL, Rozenski J, Madder A, Martins JC, De Mot R.	PLoS One	10.1371/journal.pone.0062946	2013
	Necrotrophic growth of Legionella pneumophila.	Temmerman R, Vervaeren H, Noseda B, Boon N, Verstraete W.	Appl Environ Microbiol	10.1128/aem.00070-06	2006
	Isolation and Identification of Bacillus subtilis LY-1 and Its Antifungal and Growth-Promoting Effects.	Li Y, Zhang X, He K, Song X, Yu J, Guo Z, Xu M.	Plants (Basel)	10.3390/plants12244158	2023
Enzymology	Co-utilization of microalgae and heterotrophic microorganisms improves wastewater treatment efficiency.	Takahashi M, Karitani Y, Yamada R, Matsumoto T, Ogino H.	Appl Microbiol Biotechnol	10.1007/s00253-024-13309-w	2024
	Nigrospora oryzae Causing Leaf Spot Disease on Chrysanthemum × morifolium Ramat and Screening of Its Potential Antagonistic Bacteria.	Sha H, Liu X, Xiao X, Zhang H, Gu X, Chen W, Mao B.	Microorganisms	10.3390/microorganisms11092224	2023
	Evaluation of the Growth-Inhibitory Spectrum of Three Types of Cyanoacrylate Nanoparticles on Gram-Positive and Gram-Negative Bacteria.	Sarian FD, Ando K, Tsurumi S, Miyashita R, Ute K, Ohama T.	Membranes (Basel)	10.3390/membranes12080782	2022
	Novel insights into the antibacterial activities of cannabinoid biosynthetic intermediate, olivetolic acid, and its alkyl-chain derivatives.	Lee YE, Kodama T, Morita H.	J Nat Med	10.1007/s11418-022-01672-9	2023
Genetics	Genome mining and UHPLC-QTOF-MS/MS to identify the potential antimicrobial compounds and determine the specificity of biosynthetic gene clusters in Bacillus subtilis NCD-2.	Su Z, Chen X, Liu X, Guo Q, Li S, Lu X, Zhang X, Wang P, Dong L, Zhao W, Ma P.	BMC Genomics	10.1186/s12864-020-07160-2	2020
Phylogeny	Isolation and characterization of Bacillus sp. strain BC01 from soil displaying potent antagonistic activity against plant and fish pathogenic fungi and bacteria.	Foysal MJ, Lisa AK.	J Genet Eng Biotechnol	10.1016/j.jgeb.2018.01.005	2018
Enzymology	Antibacterial activities of chemical constituents from the aerial parts of Hedyotis pilulifera.	Nguyen HT, Ho DV, Vo HQ, Le AT, Nguyen HM, Kodama T, Ito T, Morita H, Raal A.	Pharm Biol	10.1080/13880209.2017.1279673	2017
Phylogeny	Classification of the genus Bacillus based on MALDI-TOF MS analysis of ribosomal proteins coded in S10 and spc operons.	Hotta Y, Sato J, Sato H, Hosoda A, Tamura H.	J Agric Food Chem	10.1021/jf2004095	2011
Genetics	Characterization and Demonstration of Mock Communities as Control Reagents for Accurate Human Microbiome Community Measurements.	Tourlousse DM, Narita K, Miura T, Ohashi A, Matsuda M, Ohyama Y, Shimamura M, Furukawa M, Kasahara K, Kameyama K, Saito S, Goto M, Shimizu R, Mishima R, Nakayama J, Hosomi K, Kunisawa J, Terauchi J, Sekiguchi Y, Kawasaki H.	Microbiol Spectr	10.1128/spectrum.01915-21	2022
	Development of method for evaluating cell hardness and correlation between bacterial spore hardness and durability.	Nakanishi K, Kogure A, Fujii T, Kokawa R, Deuchi K.	J Nanobiotechnology	10.1186/1477-3155-10-22	2012
Enzymology	B38-CAP is a bacteria-derived ACE2-like enzyme that suppresses hypertension and cardiac dysfunction.	Minato T, Nirasawa S, Sato T, Yamaguchi T, Hoshizaki M, Inagaki T, Nakahara K, Yoshihashi T, Ozawa R, Yokota S, Natsui M, Koyota S, Yoshiya T, Yoshizawa-Kumagaye K, Motoyama S, Gotoh T, Nakaoka Y, Penninger JM, Watanabe H, Imai Y, Takahashi S, Kuba K.	Nat Commun	10.1038/s41467-020-14867-z	2020
	Bacillus subtilis 6S-1 RNA regulates transcription of genes related to surfactin biosynthesis.	Trefilov VS, Lindin EY, Elkina DE, Zvereva MI, Alferova VA, Schluter MAC, Hartmann RK, Kubareva EA, Burenina OY.	Biochimie	10.1016/j.biochi.2025.08.008	2025
	Amino Acids From Root Exudates Induce Bacillus Spore Germination to Enhance Root Colonisation and Plant Growth Promotion.	Tao L, Sun X, Beauregard PB, Tan T, Zhang Y, Xie J, Huang G, Zhang N, Miao Y, Shen Q, Xu Z, Zhang R.	Microb Biotechnol	10.1111/1751-7915.70172	2025
Genetics	Bacillus subtilis in defense mode: Switch-like adaptations to protistan predation.	van Gestel J, Koo BM, Sturmer VS, Garriga-Canut M, Wagner J, Zanon A, Gross CA.	Proc Natl Acad Sci U S A	10.1073/pnas.2518989122	2025
	Bacillus subtilis 6S-1 RNA regulates transcription of genes related to surfactin biosynthesis	Trefilov VS, Lindin EY, Elkina DE, Zvereva MI, Alferova VA, Schluter MAC, Hartmann RK, Kubareva EA, Burenina OY.	Biochimie.		2025
	Effect of gaseous ozone treatment on cells and biofilm of dairy Bacillus spp. isolates.	Catania AM, Dalmasso A, Morra P, Costa E, Bottero MT, Di Ciccio PA.	Front Microbiol	10.3389/fmicb.2025.1538456	2025
	Bioremediation and Recovery of Lead and Cadmium by Spores of Bacillus subtilis C1.	Belaeff C, De Luca Y, Di Iorio L, De Stefano M, Baccigalupi L, Giovannelli D, Ricca E, Saggese A.	Microbiologyopen	10.1002/mbo3.70170	2025
	Reciprocal sharing of extracellular proteases and extracellular matrix molecules facilitates Bacillus subtilis biofilm formation.	Rosazza T, Earl C, Eigentler L, Davidson FA, Stanley-Wall NR.	Mol Microbiol	10.1111/mmi.15288	2024
	Intrinsically robust and scalable biofilm segmentation under diverse physical growth conditions.	Chiou JG, Chou TK, Garcia-Ojalvo J, Suel GM.	iScience	10.1016/j.isci.2024.111386	2024
	The iron chelator pulcherriminic acid mediates the light response in Bacillus subtilis biofilms.	Kobayashi K, Kurata R, Tohge T.	Nat Commun	10.1038/s41467-025-60560-4	2025
	Secreted nucleases reclaim extracellular DNA during biofilm development.	Lander SM, Fisher G, Everett BA, Tran P, Prindle A.	NPJ Biofilms Microbiomes	10.1038/s41522-024-00575-9	2024
	Remediation of pharmacophoric laboratory waste by using biodegradable carbon nanoparticles of bacterial biofilm origin.	Savadiya B, Pandey G, Misra SK.	Environ Res	10.1016/j.envres.2024.118969	2024
	The TerC family metal chaperone MeeY enables surfactin export in Bacillus subtilis.	He B, Sachla AJ, Ruesewald SB, Kearns DB, Helmann JD.	J Bacteriol	10.1128/jb.00088-25	2025
	The putative role of the epipeptide EpeX in Bacillus subtilis intra-species competition.	Kalamara M, Abbott J, Sukhodub T, MacPhee C, Stanley-Wall NR.	Microbiology (Reading)	10.1099/mic.0.001344	2023
	Phylotaxonomic analysis uncovers underestimated species diversity within the genus Rossellomorea with description of selenium-resistant Rossellomorea yichunensis sp. nov	Kong J, Fu Z, Zhang Q, Liu Y, Luo Z, Zhao Z, Liu L, Liu X, Xu D, Li X, Zhang D.	BMC Microbiol		2025
Genetics	FlhG Cooperates With the Cell Cycle Regulator GpsB to Confine Peritrichous Flagella in B. subtilis.	Dornes A, Bedrunka P, Pillet B, Kressler D, Heimerl T, Pane-Farre J, Bange G.	Mol Microbiol	10.1111/mmi.15375	2025
	Nitrogen-Doped Carbon Dots: A New Powerful Fluorescent Dye with Substantial Effect on Bacterial Cell Labeling.	Lee SJ, Zheng YY, Chen WM, Hsueh YH.	ACS Omega	10.1021/acsomega.4c04273	2024
	Bacillus subtilis extracellular protease production incurs a context-dependent cost.	Rosazza T, Eigentler L, Earl C, Davidson FA, Stanley-Wall NR.	Mol Microbiol	10.1111/mmi.15110	2023
	Biophysical modeling reveals the transcriptional regulatory mechanism of Spo0A, the master regulator in starving Bacillus subtilis.	Zhang Y, Palma CSD, Chen Z, Zarazua-Osorio B, Fujita M, Igoshin OA.	mSystems	10.1128/msystems.00072-25	2025
	Exploring the Phytobeneficial and Biocontrol Capacities of Endophytic Bacteria Isolated from Hybrid Vanilla Pods.	Lalanne-Tisne G, Barral B, Taibi A, Coulibaly ZK, Burguet P, Rasoarahona F, Quinton L, Meile JC, Boubakri H, Kodja H.	Microorganisms	10.3390/microorganisms11071754	2023
	Adaptive laboratory evolution reveals regulators involved in repressing biofilm development as key players in Bacillus subtilis root colonization.	Pomerleau M, Charron-Lamoureux V, Leonard L, Grenier F, Rodrigue S, Beauregard PB.	mSystems	10.1128/msystems.00843-23	2024
	Photocontrol of bacterial membrane potential regulates antibiotic persistence in B. subtilis.	Bertolotti P, Gallinardi F, Ghidoli M, Bertarelli C, Lanzani G, Paterno GM.	Eur Phys J Plus	10.1140/epjp/s13360-025-06263-7	2025
	Azotobacter vinelandii N₂ fixation increases in co-culture with the PGPR Bacillus subtilis in a nitrogen concentration-dependent manner.	Leroux J, Beauregard PB, Bellenger J-P.	Appl Environ Microbiol	10.1128/aem.01528-24	2024
	The role of fluid friction in streamer formation and biofilm growth.	Wittig C, Wagner M, Vallon R, Crouzier T, van der Wijngaart W, Horn H, Bagheri S.	NPJ Biofilms Microbiomes	10.1038/s41522-024-00633-2	2025
	Engineering the T6SS of Pseudomonas for targeted delivery of antibacterial and antifungal effectors.	Perez-Lorente AI, Araujo-Garrido M, de Vicente A, Romero D, Molina-Santiago C.	J Biol Eng	10.1186/s13036-025-00497-w	2025
	Density and temperature controlled fluid extraction in a bacterial biofilm is determined by poly-gamma-glutamic acid production.	Morris RJ, Stevenson D, Sukhodub T, Stanley-Wall NR, MacPhee CE.	NPJ Biofilms Microbiomes	10.1038/s41522-022-00361-5	2022
Genetics	Characterization and genome mining of Bacillus subtilis BDSA1 isolated from river water in Bangladesh: A promising bacterium with diverse biotechnological applications.	Saikat TA, Sayem Khan MA, Islam MS, Tasnim Z, Ahmed S.	Heliyon	10.1016/j.heliyon.2024.e34369	2024
	DegQ is an important policing link between quorum sensing and regulated adaptative traits in Bacillus subtilis.	Danevcic T, Spacapan M, Dragos A, Kovacs AT, Mandic-Mulec I.	Microbiol Spectr	10.1128/spectrum.00908-23	2023
	Mass spectrometry imaging of natural carbonyl products directly from agar-based microbial interactions using 4-APEBA derivatization.	Velickovic D, Zemaitis KJ, Bhattacharjee A, Anderton CR.	mSystems	10.1128/msystems.00803-23	2024
Genetics	Regulation of biofilm gene expression by DNA replication in Bacillus subtilis.	Wu R, Kong LX, Liu F.	J Cell Mol Med	10.1111/jcmm.18481	2024
	Subtilosin A production is influenced by surfactin levels in Bacillus subtilis.	Dinesen C, Vertot M, Jarmusch SA, Lozano-Andrade CN, Andersen AJC, Kovacs AT.	Microlife	10.1093/femsml/uqae029	2025
	Defining early steps in Bacillus subtilis biofilm biosynthesis.	Arbour CA, Nagar R, Bernstein HM, Ghosh S, Al-Sammarraie Y, Dorfmueller HC, Ferguson MAJ, Stanley-Wall NR, Imperiali B.	mBio	10.1128/mbio.00948-23	2023
	Whole genome analysis of Bacillus velezensis 160, biological control agent of corn head smut.	Gonzalez-Leon Y, De la Vega-Camarillo E, Ramirez-Vargas R, Anducho-Reyes MA, Mercado-Flores Y.	Microbiol Spectr	10.1128/spectrum.03264-23	2024
	Surfactin accelerates Bacillus subtilis pellicle biofilm development.	Stannius RO, Fusco S, Cowled MS, Kovacs AT.	Biofilm	10.1016/j.bioflm.2024.100249	2025
	The Utilization of Bacillus subtilis to Design Environmentally Friendly Living Paints with Anti-Mold Properties	Dorfan Y, Nahami A, Morris Y, Shohat B, Kolodkin-Gal I.	Microorganisms		2024
	Kin Discrimination Modifies Strain Distribution, Spatial Segregation, and Incorporation of Extracellular Matrix Polysaccharide Mutants of Bacillus subtilis Strains into Mixed Floating Biofilms.	Boljesic M, Kraigher B, Dogsa I, Jeric Kokelj B, Mandic-Mulec I.	Appl Environ Microbiol	10.1128/aem.00871-22	2022
	Citric Acid by-Product Fermentation by Bacillus subtilis I9: A Promising Path to Sustainable Animal Feed.	Tanpong S, Khochamit N, Pootthachaya P, Siripornadulsil W, Unnawong N, Cherdthong A, Tengjaroenkul B, Wongtangtintharn S.	Vet Sci	10.3390/vetsci11100484	2024
Biotechnology	Biomining of lunar regolith simulant EAC-1 A with the fungus Penicillium simplicissimum.	Figueira J, Koch S, Muller DW, Slawik S, Cowley A, Moeller R, Cortesao M.	Fungal Biol Biotechnol	10.1186/s40694-025-00201-z	2025
	Experimental challenges in determining the rheological properties of bacterial biofilms.	Geisel S, Secchi E, Vermant J.	Interface Focus	10.1098/rsfs.2022.0032	2022
Pathogenicity	LXG Toxins of Bacillus Velezensis Mediate Contact-Dependent Inhibition in a T7SS-Dependent Manner to Enhance Rhizosphere Adaptability.	Shu X, Sun X, Wang K, Duan Y, Liu Y, Zhang R.	Int J Mol Sci	10.3390/ijms26062592	2025
Phenotype	Insights into the genomic and phenotypic characteristics of Bacillus spp. strains isolated from biofilms in broiler farms.	Gueneau V, Jimenez G, Castex M, Briandet R.	Appl Environ Microbiol	10.1128/aem.00663-24	2024
	Soft X-ray tomography reveals variations in B. subtilis biofilm structure upon tasA deletion.	Chatzimpinou A, Diehl A, Harhoff AT, Driller K, Vanslembrouck B, Chen JH, Kairiss K, Loconte V, Le Gros MA, Larabell C, Turgay K, Oschkinat H, Weinhardt V.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00659-0	2025
	Protein Homeostasis Impairment Alters Phenotypic Heterogeneity of Biofilm Communities.	Matavacas J, von Wachenfeldt C.	Mol Microbiol	10.1111/mmi.15366	2025
	Bioelectronic Delivery of Potassium Ions Controls Membrane Voltage and Growth Dynamics in Bacteria Biofilms.	Dechiraju H, Li Y, Comerci C, Luo L, Figuerres S, Asefi N, Trevino A, Barbee A, Tebyani M, Baniya P, Teodorescu M, Suel G, Rolandi M.	Biomed Mater Devices	10.1007/s44174-024-00209-w	2025
	Lysogenic control of Bacillus subtilis morphology and fitness by Spbetavirus phi3T.	Floccari VA, Feddersen H, Jakin Lazar J, Grosboillot V, Munk A, Kempen P, Hertel R, Accetto T, Kovacs AT, Bramkamp M, Dragos A.	Commun Biol	10.1038/s42003-025-08672-x	2025
	A novel regulation on the developmental checkpoint protein Sda that controls sporulation and biofilm formation in Bacillus subtilis.	He Y, Qin Y, Greenwich J, Balaban S, Darcera MVL, Gozzi K, Chai Y.	J Bacteriol	10.1128/jb.00210-24	2025
	Bacillus subtilis-derived peptides disrupt quorum sensing and biofilm assembly in multidrug-resistant Staphylococcus aureus.	Leistikow KR, May DS, Suh WS, Vargas Asensio G, Schaenzer AJ, Currie CR, Hristova KR.	mSystems	10.1128/msystems.00712-24	2024
	Pulcherriminic acid modulates iron availability and protects against oxidative stress during microbial interactions.	Charron-Lamoureux V, Haroune L, Pomerleau M, Hall L, Orban F, Leroux J, Rizzi A, Bourassa JS, Fontaine N, d'Astous EV, Dauphin-Ducharme P, Legault CY, Bellenger JP, Beauregard PB.	Nat Commun	10.1038/s41467-023-38222-0	2023
	In Silico Functional Annotation and Structural Characterization of Hypothetical Proteins in Bacillus paralicheniformis and Bacillus subtilis Isolated from Honey.	Bin Hafeez A, Sappati S, Krzemieniecki R, Worobo R, Szweda P.	ACS Omega	10.1021/acsomega.4c07105	2025
	Bacillus subtilis ensures high spore quality in competition with Salmonella Typhimurium via the SigB-dependent pathway.	Podnar E, Dendinovic K, Danevcic T, Lories B, Kovacec E, Steenackers H, Mandic-Mulec I.	ISME J	10.1093/ismejo/wraf052	2025
	The role of biofilm matrix composition in controlling colony expansion and morphology.	Charlton SGV, Kurz DL, Geisel S, Jimenez-Martinez J, Secchi E.	Interface Focus	10.1098/rsfs.2022.0035	2022
	The Intertwined Roles of Specialized Metabolites within the Bacillus subtilis Biofilm.	Kalamara M, Stanley-Wall NR.	J Bacteriol	10.1128/jb.00431-21	2021
Genetics	Genome-sequenced bacterial collection from sorghum aerial root mucilage.	Mechan-Llontop ME, Mullet J, Shade A.	Microbiol Resour Announc	10.1128/mra.00468-23	2023
	Pathogenic potential of bacteria isolated from commercial biostimulants.	Bulgari D, Filisetti S, Montagna M, Gobbi E, Faoro F.	Arch Microbiol	10.1007/s00203-022-02769-1	2022
	Bacillus subtilis produces (p)ppGpp in response to the bacteriostatic antibiotic chloramphenicol to prevent its potential bactericidal effect.	Yang J, Barra JT, Fung DK, Wang JD.	mLife	10.1002/mlf2.12031	2022
	The Stressogenic Impact of Bacterial Secretomes Is Modulated by the Size of the Milk Fat Globule Used as a Substrate.	Tzirkel-Hancock N, Raz C, Sharabi L, Argov-Argaman N.	Foods	10.3390/foods13152429	2024
	tRNA queuosine modification is involved in biofilm formation and virulence in bacteria.	Diaz-Rullo J, Gonzalez-Pastor JE.	Nucleic Acids Res	10.1093/nar/gkad667	2023
Transcriptome	Transcriptomic Analysis Reveals the Role of tmRNA on Biofilm Formation in Bacillus subtilis.	Xu S, Cao Q, Liu Z, Chen J, Yan P, Li B, Xu Y.	Microorganisms	10.3390/microorganisms10071338	2022
	Biofilm formation and manipulation with optical tweezers.	Camba C, Walter-Lakes B, Digal P, Taheri-Araghi S, Bezryadina A.	Biomed Opt Express	10.1364/boe.510836	2024
	Isolation, characterization, and assessment of Bacillus rugosus potential as a new probiotic for aquaculture applications.	Shokrak NM, Khairi N, Hazrin-Chong NH, Mohamed RA, Abdella B.	Sci Rep	10.1038/s41598-024-74534-x	2024
Genetics	Improving Beneficial Traits in Bacillus cabrialesii subsp. cabrialesii TE3^T through UV-Induced Genomic Changes.	Morales Sandoval PH, Ortega Urquieta ME, Valenzuela Ruiz V, Montanez Acosta K, Campos Castro KA, Parra Cota FI, Santoyo G, de Los Santos Villalobos S.	Plants (Basel)	10.3390/plants13182578	2024
	Biocontrol potential of Bacillus subtilis CTXW 7-6-2 against kiwifruit soft rot pathogens revealed by whole-genome sequencing and biochemical characterisation.	Chen T, Zhang Z, Li W, Chen J, Chen X, Wang B, Ma J, Dai Y, Ding H, Wang W, Long Y.	Front Microbiol	10.3389/fmicb.2022.1069109	2022
	Genomics of the Thermophilic Bacterium Thermosulfidibacter takaii Reveals Novel Lineage of Deep-Branching Bacterial Phylum.	Montecillo JAV.	Indian J Microbiol	10.1007/s12088-024-01214-9	2024
	A review on mechanisms and prospects of endophytic bacteria in biocontrol of plant pathogenic fungi and their plant growth-promoting activities	Ali M, Ahmed T, Ibrahim E, Rizwan M, Chong K, Yong J.	Heliyon		2024
	Donor-strand exchange drives assembly of the TasA scaffold in Bacillus subtilis biofilms.	Bohning J, Ghrayeb M, Pedebos C, Abbas DK, Khalid S, Chai L, Bharat TAM.	Nat Commun	10.1038/s41467-022-34700-z	2022
	A Review of Medicinal Plants Used in the Management of Microbial Infections in Angola.	Tlhapi D, Malebo N, Manduna IT, Lautenschlager T, Mawunu M.	Plants (Basel)	10.3390/plants13212991	2024
	The ComX Quorum Sensing Peptide of Bacillus subtilis Affects Biofilm Formation Negatively and Sporulation Positively.	Spacapan M, Danevcic T, Stefanic P, Porter M, Stanley-Wall NR, Mandic-Mulec I.	Microorganisms	10.3390/microorganisms8081131	2020
	Facing Foodborne Pathogen Biofilms with Green Antimicrobial Agents: One Health Approach.	Kao Godinez AK, Villicana C, Basilio Heredia J, Valdez-Torres JB, Muy-Rangel M, Leon-Felix J.	Molecules	10.3390/molecules30081682	2025
Metabolism	Cyclic di-GMP Signaling in Bacillus subtilis Is Governed by Direct Interactions of Diguanylate Cyclases and Cognate Receptors.	Kunz S, Tribensky A, Steinchen W, Oviedo-Bocanegra L, Bedrunka P, Graumann PL.	mBio	10.1128/mbio.03122-19	2020
	Species and condition shape the mutational spectrum in experimentally evolved biofilms.	Hu G, Wang Y, Liu X, Strube ML, Wang B, Kovacs AT.	mSystems	10.1128/msystems.00548-23	2023
	Signatures of kin selection in a natural population of the bacteria Bacillus subtilis.	Belcher LJ, Dewar AE, Hao C, Ghoul M, West SA.	Evol Lett	10.1093/evlett/qrad029	2023
	The mutational landscape of Bacillus subtilis conditional hypermutators shows how proofreading skews DNA polymerase error rates.	Tanneur I, Dervyn E, Guerin C, Kon Kam King G, Jules M, Nicolas P.	Nucleic Acids Res	10.1093/nar/gkaf147	2025
	Investigating the Antibacterial Effect of a Novel Gallic Acid-Based Green Sanitizer Formulation.	Mwangi EW, Shemesh M, Rodov V.	Foods	10.3390/foods13203322	2024
Pathogenicity	Biopolymer-enriched B. subtilis NCIB 3610 biofilms exhibit increased erosion resistance.	Hayta EN, Lieleg O.	Biomater Sci	10.1039/c9bm00927b	2019
Metabolism	Calcium Prevents Biofilm Dispersion in Bacillus subtilis.	Nishikawa M, Kobayashi K.	J Bacteriol	10.1128/jb.00114-21	2021
	Chickpea-Derived Prebiotic Substances Trigger Biofilm Formation by Bacillus subtilis.	Amoah YS, Rajasekharan SK, Reifen R, Shemesh M.	Nutrients	10.3390/nu13124228	2021
Genetics	Genomic insights into the taxonomic status and bioactive gene cluster profiling of Bacillus velezensis RVMD2 isolated from desert rock varnish in Ma'an, Jordan.	Alnaimat SM, Abushattal S, Dmour SM, Al-Awaida WJ, Ayyash AM, Goh KW.	PLoS One	10.1371/journal.pone.0319345	2025
	A conserved nuclease facilitates environmental DNA uptake.	Hanssmann J, Pane-Farre J, Meiser M, Girbig M, Fu L, Madej MG, Sendker FL, Tholken C, Lechner M, Ziegler C, Hochberg GKA, Bange G, Thanbichler M, Hinrichs R.	Nucleic Acids Res	10.1093/nar/gkaf443	2025
	Lateral interactions govern self-assembly of the bacterial biofilm matrix protein BslA.	Arnaouteli S, Bamford NC, Brandani GB, Morris RJ, Schor M, Carrington JT, Hobley L, van Aalten DMF, Stanley-Wall NR, MacPhee CE.	Proc Natl Acad Sci U S A	10.1073/pnas.2312022120	2023
	Biocontrol of Peach Gummosis by Bacillus velezensis KTA01 and Its Antifungal Mechanism.	Kang TA, Lee G, Kim K, Hahn D, Shin JH, Kim WC.	J Microbiol Biotechnol	10.4014/jmb.2310.10005	2024
	Chemotaxis of Beneficial Rhizobacteria to Root Exudates: The First Step towards Root-Microbe Rhizosphere Interactions.	Feng H, Fu R, Hou X, Lv Y, Zhang N, Liu Y, Xu Z, Miao Y, Krell T, Shen Q, Zhang R.	Int J Mol Sci	10.3390/ijms22136655	2021
	Surfactin Facilitates Horizontal Gene Transfer in Bacillus subtilis.	Danevcic T, Dragos A, Spacapan M, Stefanic P, Dogsa I, Mandic-Mulec I.	Front Microbiol	10.3389/fmicb.2021.657407	2021
	Simultaneous spatiotemporal transcriptomics and microscopy of Bacillus subtilis swarm development reveal cooperation across generations.	Jeckel H, Nosho K, Neuhaus K, Hastewell AD, Skinner DJ, Saha D, Netter N, Paczia N, Dunkel J, Drescher K.	Nat Microbiol	10.1038/s41564-023-01518-4	2023
	A novel time-lapse imaging method for studying developing bacterial biofilms.	Futo M, Siroki T, Koska S, Corak N, Tusar A, Domazet-Loso M, Domazet-Loso T.	Sci Rep	10.1038/s41598-022-24431-y	2022
Enzymology	Methyltransferase DnmA is responsible for genome-wide N6-methyladenosine modifications at non-palindromic recognition sites in Bacillus subtilis.	Nye TM, van Gijtenbeek LA, Stevens AG, Schroeder JW, Randall JR, Matthews LA, Simmons LA.	Nucleic Acids Res	10.1093/nar/gkaa266	2020
Metabolism	Pulcherrimin formation controls growth arrest of the Bacillus subtilis biofilm.	Arnaouteli S, Matoz-Fernandez DA, Porter M, Kalamara M, Abbott J, MacPhee CE, Davidson FA, Stanley-Wall NR.	Proc Natl Acad Sci U S A	10.1073/pnas.1903982116	2019
	Bacillus subtilis EpsA-O: A novel exopolysaccharide structure acting as an efficient adhesive in biofilms.	Dogsa I, Bellich B, Blaznik M, Lagatolla C, Ravenscroft N, Rizzo R, Stopar D, Cescutti P.	NPJ Biofilms Microbiomes	10.1038/s41522-024-00555-z	2024
Metabolism	The nucleotide pGpp acts as a third alarmone in Bacillus, with functions distinct from those of (p) ppGpp.	Yang J, Anderson BW, Turdiev A, Turdiev H, Stevenson DM, Amador-Noguez D, Lee VT, Wang JD.	Nat Commun	10.1038/s41467-020-19166-1	2020
	Surfactin and Spo0A-Dependent Antagonism by Bacillus subtilis Strain UD1022 against Medicago sativa Phytopathogens.	Rosier A, Pomerleau M, Beauregard PB, Samac DA, Bais HP.	Plants (Basel)	10.3390/plants12051007	2023
	A segmentation clock patterns cellular differentiation in a bacterial biofilm.	Chou KT, Lee DD, Chiou JG, Galera-Laporta L, Ly S, Garcia-Ojalvo J, Suel GM.	Cell	10.1016/j.cell.2021.12.001	2022
	Highly Efficient Biotransformation and Production of Selenium Nanoparticles and Polysaccharides Using Potential Probiotic Bacillus subtilis T5	Duan Y, Li M, Zhang S, Wang Y, Deng J, Wang Q, Yi T, Dong X, Cheng S, He Y, Gao C, Wang Z.	Metabolites	10.3390/metabo12121204	2022
	The roles of intracellular and extracellular calcium in Bacillus subtilis biofilms.	Keren-Paz A, Maan H, Karunker I, Olender T, Kapishnikov S, Dersch S, Kartvelishvily E, Wolf SG, Gal A, Graumann PL, Kolodkin-Gal I.	iScience	10.1016/j.isci.2022.104308	2022
Metabolism	The Exo-Polysaccharide Component of Extracellular Matrix is Essential for the Viscoelastic Properties of Bacillus subtilis Biofilms.	Pandit S, Fazilati M, Gaska K, Derouiche A, Nypelo T, Mijakovic I, Kadar R.	Int J Mol Sci	10.3390/ijms21186755	2020
	Bacillus subtilis RBT-7/32 and Bacillus licheniformis RBT-11/17 as New Promising Strains for Use in Probiotic Feed Additives.	Yaderets V, Karpova N, Glagoleva E, Shibaeva A, Dzhavakhiya V.	Microorganisms	10.3390/microorganisms11112729	2023
	Processing and decay of 6S-1 and 6S-2 RNAs in Bacillus subtilis.	Wiegard JC, Damm K, Lechner M, Tholken C, Ngo S, Putzer H, Hartmann RK.	RNA	10.1261/rna.079666.123	2023
	Genome-Annotated Bacterial Collection of the Barley Rhizosphere Microbiota.	Robertson-Albertyn S, Abbott JC, Concas F, Brown LH, Orr JN, George TS, Bulgarelli D.	Microbiol Resour Announc	10.1128/mra.01064-21	2022
	Morphogenesis and mechanical properties of Bacillus amyloliquefaciens biofilms: a comparative study of rough and smooth morphotypes	Baudu E, Raspaud E, Fontagne-Faucher C, Nait Chabane Y, Marcato-Romain C.	Curr Res Microb Sci		2025
	Biofilm formation by Bacillus subtilis is altered in the presence of pesticides.	Newton R, Amstutz J, Patrick JE.	Access Microbiol	10.1099/acmi.0.000175	2020
	Founder cell configuration drives competitive outcome within colony biofilms.	Eigentler L, Kalamara M, Ball G, MacPhee CE, Stanley-Wall NR, Davidson FA.	ISME J	10.1038/s41396-022-01198-8	2022
Metabolism	Probiotic Bacillus subtilis Protects against alpha-Synuclein Aggregation in C. elegans.	Goya ME, Xue F, Sampedro-Torres-Quevedo C, Arnaouteli S, Riquelme-Dominguez L, Romanowski A, Brydon J, Ball KL, Stanley-Wall NR, Doitsidou M.	Cell Rep	10.1016/j.celrep.2019.12.078	2020
Genetics	Complete genome analysis and antimicrobial mechanism of Bacillus velezensis GX0002980 reveals its biocontrol potential against mango anthracnose disease.	Wang J, Xie X, Li B, Yang L, Song F, Zhou Y, Jiang M.	Microbiol Spectr	10.1128/spectrum.02685-24	2025
	Real-Time Messenger RNA Dynamics in Bacillus subtilis.	Sattler L, Graumann PL.	Front Microbiol	10.3389/fmicb.2021.760857	2021
Metabolism	Social behaviours by Bacillus subtilis: quorum sensing, kin discrimination and beyond.	Kalamara M, Spacapan M, Mandic-Mulec I, Stanley-Wall NR.	Mol Microbiol	10.1111/mmi.14127	2018
	The alternative sigma factor SigN of Bacillus subtilis is intrinsically toxic.	Burton AT, Pospisilova D, Sudzinova P, Snider EV, Burrage AM, Krasny L, Kearns DB.	J Bacteriol	10.1128/jb.00112-23	2023
	Enhanced surface colonisation and competition during bacterial adaptation to a fungus.	Richter A, Blei F, Hu G, Schwitalla JW, Lozano-Andrade CN, Xie J, Jarmusch SA, Wibowo M, Kjeldgaard B, Surabhi S, Xu X, Jautzus T, Phippen CBW, Tyc O, Arentshorst M, Wang Y, Garbeva P, Larsen TO, Ram AFJ, van den Hondel CAM, Maroti G, Kovacs AT.	Nat Commun	10.1038/s41467-024-48812-1	2024
	Studying root-environment interactions in structured microdevices.	Kaiser CF, Perilli A, Grossmann G, Meroz Y.	J Exp Bot	10.1093/jxb/erad122	2023
	Antimicrobial Activity of Quercetin: An Approach to Its Mechanistic Principle.	Nguyen TLA, Bhattacharya D.	Molecules	10.3390/molecules27082494	2022
	Lanthanide bioadsorption by the extremophile Exiguobacterium sp.: utilizing microbial extracellular polysaccharides for high-value element recovery.	Gallardo K, Serrano G, Castillo R, Michea S, Urzua JI, Arias D, Remonsellez F.	Front Microbiol	10.3389/fmicb.2025.1575677	2025
	Bacterial-Assisted Extraction of Bioactive Compounds from Cauliflower.	Doria E, Buonocore D, Marra A, Bonta V, Gazzola A, Dossena M, Verri M, Calvio C.	Plants (Basel)	10.3390/plants11060816	2022
Metabolism	Molecular Mechanism of Regulation of the Purine Salvage Enzyme XPRT by the Alarmones pppGpp, ppGpp, and pGpp.	Anderson BW, Hao A, Satyshur KA, Keck JL, Wang JD.	J Mol Biol	10.1016/j.jmb.2020.05.013	2020
	Antibiotic Stimulation of a Bacillus subtilis Migratory Response.	Liu Y, Kyle S, Straight PD.	mSphere	10.1128/msphere.00586-17	2018
	Spatiotemporal bio-shielding of bacteria through consolidated geometrical structuring.	Rajasekharan SK, Shemesh M.	NPJ Biofilms Microbiomes	10.1038/s41522-022-00302-2	2022
	Experimental evolution of Bacillus subtilis on Arabidopsis thaliana roots reveals fast adaptation and improved root colonization.	Nordgaard M, Blake C, Maroti G, Hu G, Wang Y, Strube ML, Kovacs AT.	iScience	10.1016/j.isci.2022.104406	2022
	Prenylation of dimeric cyclo-L-Trp-L-Trp by the promiscuous cyclo-L-Trp-L-Ala prenyltransferase EchPT1.	Li W, Xie X, Liu J, Yu H, Li SM.	Appl Microbiol Biotechnol	10.1007/s00253-023-12773-0	2023
Metabolism	In Vivo Behavior of the Tandem Glycine Riboswitch in Bacillus subtilis.	Babina AM, Lea NE, Meyer MM.	mBio	10.1128/mbio.01602-17	2017
	Seed banks alter the molecular evolutionary dynamics of Bacillus subtilis.	Shoemaker WR, Polezhaeva E, Givens KB, Lennon JT.	Genetics	10.1093/genetics/iyac071	2022
	Surface topology affects wetting behavior of Bacillus subtilis biofilms.	Werb M, Falcon Garcia C, Bach NC, Grumbein S, Sieber SA, Opitz M, Lieleg O.	NPJ Biofilms Microbiomes	10.1038/s41522-017-0018-1	2017
Genetics	Identification and Characterization of Bacillus tequilensis GYUN-300: An Antagonistic Bacterium Against Red Pepper Anthracnose Caused by Colletotrichum acutatum in Korea.	Kwon HT, Lee Y, Kim J, Balaraju K, Kim HT, Jeon Y.	Front Microbiol	10.3389/fmicb.2022.826827	2022
Metabolism	Plant-environment microscopy tracks interactions of Bacillus subtilis with plant roots across the entire rhizosphere.	Liu Y, Patko D, Engelhardt I, George TS, Stanley-Wall NR, Ladmiral V, Ameduri B, Daniell TJ, Holden N, MacDonald MP, Dupuy LX.	Proc Natl Acad Sci U S A	10.1073/pnas.2109176118	2021
	Termination factor Rho: From the control of pervasive transcription to cell fate determination in Bacillus subtilis.	Bidnenko V, Nicolas P, Grylak-Mielnicka A, Delumeau O, Auger S, Aucouturier A, Guerin C, Repoila F, Bardowski J, Aymerich S, Bidnenko E.	PLoS Genet	10.1371/journal.pgen.1006909	2017
	Genome Editing Methods for Bacillus subtilis.	Wozniak KJ, Simmons LA.	Methods Mol Biol	10.1007/978-1-0716-2233-9_11	2022
Metabolism	The Plant Host Induces Antibiotic Production To Select the Most-Beneficial Colonizers.	Ogran A, Yardeni EH, Keren-Paz A, Bucher T, Jain R, Gilhar O, Kolodkin-Gal I.	Appl Environ Microbiol	10.1128/aem.00512-19	2019
	Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10.	Berte R, Teixeira GM, de Oliveira JP, Nicoletto MLA, da Silva DV, de Godoy GG, Sanches DS, de Resende JTV, Pereira UP, Nunes da Rocha U, de Oliveira AG.	Genes (Basel)	10.3390/genes13111984	2022
	Microbial Exudates as Biostimulants: Role in Plant Growth Promotion and Stress Mitigation.	Ansari M, Devi BM, Sarkar A, Chattopadhyay A, Satnami L, Balu P, Choudhary M, Shahid MA, Jailani AAK.	J Xenobiot	10.3390/jox13040037	2023
	The myth of antibiotic spider silk.	Fruergaard S, Lund MB, Schramm A, Vosegaard T, Bilde T.	iScience	10.1016/j.isci.2021.103125	2021
	The milk fat globule size governs a physiological switch for biofilm formation by Bacillus subtilis.	Raz C, Paramonov MM, Shemesh M, Argov-Argaman N.	Front Nutr	10.3389/fnut.2022.844587	2022
Phylogeny	Enzyme sub-functionalization driven by regulation.	van Loo B, Bornberg-Bauer E.	EMBO Rep	10.15252/embr.201744383	2017
	Bacillus subtilis Protects Public Goods by Extending Kin Discrimination to Closely Related Species.	Lyons NA, Kolter R.	mBio	10.1128/mbio.00723-17	2017
	Strain-dependent motility defects and suppression by a flhO mutation for B. subtilis bactofilins.	Holtrup S, Graumann PL.	BMC Res Notes	10.1186/s13104-022-06048-6	2022
	Complex extracellular biology drives surface competition during colony expansion in Bacillus subtilis.	Jautzus T, van Gestel J, Kovacs AT.	ISME J	10.1038/s41396-022-01279-8	2022
	Deciphering the genetic and functional diversity of cultivable bacteria from chasmophytic pigweed (Chenopodium album) from Tsomoriri, Ladakh, India.	Das S, Verma S, Choudhary P, Singh R, Saxena AK.	3 Biotech	10.1007/s13205-022-03278-0	2022
	Sucrose triggers a novel signaling cascade promoting Bacillus subtilis rhizosphere colonization.	Tian T, Sun B, Shi H, Gao T, He Y, Li Y, Liu Y, Li X, Zhang L, Li S, Wang Q, Chai Y.	ISME J	10.1038/s41396-021-00966-2	2021
	Bacillus subtilis utilizes the DNA damage response to manage multicellular development.	Gozzi K, Ching C, Paruthiyil S, Zhao Y, Godoy-Carter V, Chai Y.	NPJ Biofilms Microbiomes	10.1038/s41522-017-0016-3	2017
Metabolism	Impact of Rap-Phr system abundance on adaptation of Bacillus subtilis.	Gallegos-Monterrosa R, Christensen MN, Barchewitz T, Koppenhofer S, Priyadarshini B, Balint B, Maroti G, Kempen PJ, Dragos A, Kovacs AT.	Commun Biol	10.1038/s42003-021-01983-9	2021
	Kin discrimination drives territorial exclusion during Bacillus subtilis swarming and restrains exploitation of surfactin.	Kraigher B, Butolen M, Stefanic P, Mandic Mulec I.	ISME J	10.1038/s41396-021-01124-4	2022
Genetics	Genome sequence analysis of the beneficial Bacillus subtilis PTA-271 isolated from a Vitis vinifera (cv. Chardonnay) rhizospheric soil: assets for sustainable biocontrol.	Leal C, Fontaine F, Aziz A, Egas C, Clement C, Trotel-Aziz P.	Environ Microbiome	10.1186/s40793-021-00372-3	2021
Biotechnology	Fungicide sensitivity of grapevine bacteria with plant growth-promoting traits and antagonistic activity as non-target microorganisms.	Andreolli M, Lampis S, Tosi L, Marano V, Zapparoli G.	World J Microbiol Biotechnol	10.1007/s11274-023-03569-5	2023
	Suppressor mutations in ribosomal proteins and FliY restore Bacillus subtilis swarming motility in the absence of EF-P.	Hummels KR, Kearns DB.	PLoS Genet	10.1371/journal.pgen.1008179	2019
	Effects of DNA Topology on Transcription from rRNA Promoters in Bacillus subtilis.	Sudzinova P, Kambova M, Ramaniuk O, Benda M, Sanderova H, Krasny L.	Microorganisms	10.3390/microorganisms9010087	2021
	Membrane Targeted Azobenzene Drives Optical Modulation of Bacterial Membrane Potential.	de Souza-Guerreiro TC, Bondelli G, Grobas I, Donini S, Sesti V, Bertarelli C, Lanzani G, Asally M, Paterno GM.	Adv Sci (Weinh)	10.1002/advs.202205007	2023
	Selective inhibition of the amyloid matrix of Escherichia coli biofilms by a bifunctional microbial metabolite.	Cordisco E, Zanor MI, Moreno DM, Serra DO.	NPJ Biofilms Microbiomes	10.1038/s41522-023-00449-6	2023
	Root colonization by beneficial rhizobacteria.	Liu Y, Xu Z, Chen L, Xun W, Shu X, Chen Y, Sun X, Wang Z, Ren Y, Shen Q, Zhang R.	FEMS Microbiol Rev	10.1093/femsre/fuad066	2024
	Rampant loss of social traits during domestication of a Bacillus subtilis natural isolate.	Barreto HC, Cordeiro TN, Henriques AO, Gordo I.	Sci Rep	10.1038/s41598-020-76017-1	2020
	Oral Application of Recombinant Bacillus subtilis Spores to Dogs Results in a Humoral Response against Specific Echinococcus granulosus Paramyosin and Tropomyosin Antigens.	Vogt CM, Armua-Fernandez MT, Tobler K, Hilbe M, Aguilar C, Ackermann M, Deplazes P, Eichwald C.	Infect Immun	10.1128/iai.00495-17	2018
Metabolism	Lack of formylated methionyl-tRNA has pleiotropic effects on Bacillus subtilis.	Cai Y, Chandrangsu P, Gaballa A, Helmann JD.	Microbiology (Reading)	10.1099/mic.0.000413	2017
	The catalytic mechanism, metal dependence, substrate specificity, and biodiversity of ribonuclease H.	Pang J, Guo Q, Lu Z.	Front Microbiol	10.3389/fmicb.2022.1034811	2022
	Magnesium Modulates Bacillus subtilis Cell Division Frequency.	Guo T, Herman JK.	J Bacteriol	10.1128/jb.00375-22	2023
	Draft genome sequence data of a chromium reducing bacterium, Bacillus licheniformis strain KNP.	Arora PK, Mishra R, Omar RA, Saroj RS, Srivastava A, Garg SK, Singh VP.	Data Brief	10.1016/j.dib.2020.106640	2021
	Localized electrical stimulation triggers cell-type-specific proliferation in biofilms.	Comerci CJ, Gillman AL, Galera-Laporta L, Gutierrez E, Groisman A, Larkin JW, Garcia-Ojalvo J, Suel GM.	Cell Syst	10.1016/j.cels.2022.04.001	2022
Genetics	Comparative Genomic and Functional Analysis of c-di-GMP Metabolism and Regulatory Proteins in Bacillus velezensis LQ-3.	Li R, Yang P, Zhang H, Wang C, Zhao F, Liu J, Wang Y, Liang Y, Sun T, Xie X.	Microorganisms	10.3390/microorganisms12081724	2024
Metabolism	A counter-enzyme complex regulates glutamate metabolism in Bacillus subtilis.	Jayaraman V, Lee DJ, Elad N, Vimer S, Sharon M, Fraser JS, Tawfik DS.	Nat Chem Biol	10.1038/s41589-021-00919-y	2022
	Expanding Molecular Coverage in Mass Spectrometry Imaging of Microbial Systems Using Metal-Assisted Laser Desorption/Ionization.	Lukowski JK, Bhattacharjee A, Yannarell SM, Schwarz K, Shor LM, Shank EA, Anderton CR.	Microbiol Spectr	10.1128/spectrum.00520-21	2021
	Novel form of collective movement by soil bacteria.	Engelhardt IC, Patko D, Liu Y, Mimault M, de Las Heras Martinez G, George TS, MacDonald M, Ptashnyk M, Sukhodub T, Stanley-Wall NR, Holden N, Daniell TJ, Dupuy LX.	ISME J	10.1038/s41396-022-01277-w	2022
Metabolism	Molecular and Cell Biological Analysis of SwrB in Bacillus subtilis.	Phillips AM, Sanchez S, Sysoeva TA, Burton BM, Kearns DB.	J Bacteriol	10.1128/jb.00227-21	2021
Metabolism	Contact with the CsrA Core Is Required for Allosteric Inhibition by FliW in Bacillus subtilis.	Oshiro RT, Dunn CM, Kearns DB.	J Bacteriol	10.1128/jb.00574-20	2020
	Edible Leafy Plants from Mexico as Sources of Antioxidant Compounds, and Their Nutritional, Nutraceutical and Antimicrobial Potential: A Review.	Mateos-Maces L, Chavez-Servia JL, Vera-Guzman AM, Aquino-Bolanos EN, Alba-Jimenez JE, Villagomez-Gonzalez BB.	Antioxidants (Basel)	10.3390/antiox9060541	2020
	A Sequence of Developmental Events Occurs Underneath Growing Bacillus subtilis Pellicles.	Lee LM, Rosenberg G, Rubinstein SM.	Front Microbiol	10.3389/fmicb.2019.00842	2019
	Collective Vortex-Like Movement of Bacillus subtilis Facilitates the Generation of Floating Biofilms.	Steinberg N, Rosenberg G, Keren-Paz A, Kolodkin-Gal I.	Front Microbiol	10.3389/fmicb.2018.00590	2018
Metabolism	Genome analysis of a Bacillus subtilis strain reveals genetic mutations determining biocontrol properties.	Boka B, Manczinger L, Kocsube S, Shine K, Alharbi NS, Khaled JM, Munsterkotter M, Vagvolgyi C, Kredics L.	World J Microbiol Biotechnol	10.1007/s11274-019-2625-x	2019
	eDNA Provides a Scaffold for Autoaggregation of B. subtilis in Bacterioplankton Suspension.	Dogsa I, Kostanjsek R, Stopar D.	Microorganisms	10.3390/microorganisms11020332	2023
	Administration of probiotics affects Artemia franciscana metanauplii intestinal ultrastructure and offers resistance against a Photobacterium damselae ssp. piscicida induced oxidative stress response.	Touraki M, Chanou A, Mavridou V, Tsertseli V, Tsiridi M, Panteris E.	Fish Shellfish Immunol Rep	10.1016/j.fsirep.2023.100113	2023
Metabolism	Bacillaene Mediates the Inhibitory Effect of Bacillus subtilis on Campylobacter jejuni Biofilms.	Erega A, Stefanic P, Dogsa I, Danevcic T, Simunovic K, Klancnik A, Smole Mozina S, Mandic Mulec I.	Appl Environ Microbiol	10.1128/aem.02955-20	2021
Genetics	DNA Replication-Transcription Conflicts Do Not Significantly Contribute to Spontaneous Mutations Due to Replication Errors in Escherichia coli.	Foster PL, Niccum BA, Lee H.	mBio	10.1128/mbio.02503-21	2021
	Comparative Genome Characterization of a Petroleum-Degrading Bacillus subtilis Strain DM2.	Li SW, Liu MY, Yang RQ.	Int J Genomics	10.1155/2019/7410823	2019
	Mixed-species bacterial swarms show an interplay of mixing and segregation across scales.	Natan G, Worlitzer VM, Ariel G, Be'er A.	Sci Rep	10.1038/s41598-022-20644-3	2022
	Three-dimensional biofilm colony growth supports a mutualism involving matrix and nutrient sharing.	Arjes HA, Willis L, Gui H, Xiao Y, Peters J, Gross C, Huang KC.	Elife	10.7554/elife.64145	2021
Metabolism	Biodegradation of Petroleum Hydrocarbons by Bacillus subtilis BL-27, a Strain with Weak Hydrophobicity.	Wang D, Lin J, Lin J, Wang W, Li S.	Molecules	10.3390/molecules24173021	2019
Enzymology	Bacilli glutamate dehydrogenases diverged via coevolution of transcription and enzyme regulation.	Noda-Garcia L, Romero Romero ML, Longo LM, Kolodkin-Gal I, Tawfik DS.	EMBO Rep	10.15252/embr.201743990	2017
	Bacillus subtilis biofilm matrix components target seed oil bodies to promote growth and anti-fungal resistance in melon.	Berlanga-Clavero MV, Molina-Santiago C, Caraballo-Rodriguez AM, Petras D, Diaz-Martinez L, Perez-Garcia A, de Vicente A, Carrion VJ, Dorrestein PC, Romero D.	Nat Microbiol	10.1038/s41564-022-01134-8	2022
	Spoilage Bacteria Identification and Food Safety Risk Assessment of Whole Soybean Curd.	Wang C, Du Q, Yao T, Dong H, Wu D, Qin W, Raheem D, Zhang Q.	Indian J Microbiol	10.1007/s12088-019-00778-1	2019
	Bridelia ferruginea Benth.; An ethnomedicinal, phytochemical, pharmacological and toxicological review.	Yeboah GN, Owusu FWA, Archer MA, Kyene MO, Kumadoh D, Ayertey F, Mintah SO, Atta-Adjei Junior P, Appiah AA.	Heliyon	10.1016/j.heliyon.2022.e10366	2022
	Migration of surface-associated microbial communities in spaceflight habitats.	Marra D, Karapantsios T, Caserta S, Secchi E, Holynska M, Labarthe S, Polizzi B, Ortega S, Kostoglou M, Lasseur C, Karapanagiotis I, Lecuyer S, Bridier A, Noirot-Gros MF, Briandet R.	Biofilm	10.1016/j.bioflm.2023.100109	2023
Genetics	The Impact of RNA-DNA Hybrids on Genome Integrity in Bacteria.	McLean EK, Nye TM, Lowder FC, Simmons LA.	Annu Rev Microbiol	10.1146/annurev-micro-102521-014450	2022
	Involvement of E. coli 6S RNA in Oxidative Stress Response.	Burenina OY, Elkina DA, Ovcharenko A, Bannikova VA, Schluter MAC, Oretskaya TS, Hartmann RK, Kubareva EA.	Int J Mol Sci	10.3390/ijms23073653	2022
	Mechanisms driving spatial distribution of residents in colony biofilms: an interdisciplinary perspective.	Eigentler L, Davidson FA, Stanley-Wall NR.	Open Biol	10.1098/rsob.220194	2022
	Appraising the therapeutical potentials of Alchornea laxiflora (Benth.) Pax & K. Hoffm., an underexplored medicinal herb: A systematic review.	Jain NK, Tailang M, Kumar S, Chandrasekaran B, Alghazwani Y, Chandramoorthy HC, Kumar A, Deshpande H, Wal P, Balamurugan M, Chidambaram K.	Front Pharmacol	10.3389/fphar.2022.958453	2022
	Elasticity and wrinkled morphology of Bacillus subtilis pellicles.	Trejo M, Douarche C, Bailleux V, Poulard C, Mariot S, Regeard C, Raspaud E.	Proc Natl Acad Sci U S A	10.1073/pnas.1217178110	2013
Metabolism	Cyclic di-AMP Acts as an Extracellular Signal That Impacts Bacillus subtilis Biofilm Formation and Plant Attachment.	Townsley L, Yannarell SM, Huynh TN, Woodward JJ, Shank EA.	mBio	10.1128/mbio.00341-18	2018
	Presence of Calcium Lowers the Expansion of Bacillus subtilis Colony Biofilms.	Mhatre E, Sundaram A, Holscher T, Muhlstadt M, Bossert J, Kovacs AT.	Microorganisms	10.3390/microorganisms5010007	2017
	Specificity of the DNA Mismatch Repair System (MMR) and Mutagenesis Bias in Bacteria.	Long H, Miller SF, Williams E, Lynch M.	Mol Biol Evol	10.1093/molbev/msy134	2018
	Two MarR-Type Repressors Balance Precursor Uptake and Glycine Betaine Synthesis in Bacillus subtilis to Provide Cytoprotection Against Sustained Osmotic Stress.	Warmbold B, Ronzheimer S, Freibert SA, Seubert A, Hoffmann T, Bremer E.	Front Microbiol	10.3389/fmicb.2020.01700	2020
	Competition between growth and shear stress drives intermittency in preferential flow paths in porous medium biofilms.	Kurz DL, Secchi E, Carrillo FJ, Bourg IC, Stocker R, Jimenez-Martinez J.	Proc Natl Acad Sci U S A	10.1073/pnas.2122202119	2022
Genetics	Rates of Mutations and Transcript Errors in the Foodborne Pathogen Salmonella enterica subsp. enterica.	Pan J, Li W, Ni J, Wu K, Konigsberg I, Rivera CE, Tincher C, Gregory C, Zhou X, Doak TG, Lee H, Wang Y, Gao X, Lynch M, Long H.	Mol Biol Evol	10.1093/molbev/msac081	2022
	Synthesis, characterization, optical and antimicrobial studies of polyvinyl alcohol-silver nanocomposites.	Mahmoud KH.	Spectrochim Acta A Mol Biomol Spectrosc	10.1016/j.saa.2014.11.074	2015
	Monitoring Spatial Segregation in Surface Colonizing Microbial Populations.	Holscher T, Dragos A, Gallegos-Monterrosa R, Martin M, Mhatre E, Richter A, Kovacs AT.	J Vis Exp	10.3791/54752	2016
Pathogenicity	Bacillus subtilis Early Colonization of Arabidopsis thaliana Roots Involves Multiple Chemotaxis Receptors.	Allard-Massicotte R, Tessier L, Lecuyer F, Lakshmanan V, Lucier JF, Garneau D, Caudwell L, Vlamakis H, Bais HP, Beauregard PB.	mBio	10.1128/mbio.01664-16	2016
Metabolism	Lysinibacillus fusiformis M5 Induces Increased Complexity in Bacillus subtilis 168 Colony Biofilms via Hypoxanthine.	Gallegos-Monterrosa R, Kankel S, Gotze S, Barnett R, Stallforth P, Kovacs AT.	J Bacteriol	10.1128/jb.00204-17	2017
	Bacterial response to graphene oxide and reduced graphene oxide integrated in agar plates.	Mokkapati VRSS, Pandit S, Kim J, Martensson A, Lovmar M, Westerlund F, Mijakovic I.	R Soc Open Sci	10.1098/rsos.181083	2018
Metabolism	Mouse intestinal microbiota reduction favors local intestinal immunity triggered by antigens displayed in Bacillus subtilis biofilm.	Vogt CM, Hilbe M, Ackermann M, Aguilar C, Eichwald C.	Microb Cell Fact	10.1186/s12934-018-1030-8	2018
	Species-Independent Attraction to Biofilms through Electrical Signaling.	Humphries J, Xiong L, Liu J, Prindle A, Yuan F, Arjes HA, Tsimring L, Suel GM.	Cell	10.1016/j.cell.2016.12.014	2017
Phylogeny	Detectability of biosignatures in a low-biomass simulation of martian sediments.	Stevens AH, McDonald A, de Koning C, Riedo A, Preston LJ, Ehrenfreund P, Wurz P, Cockell CS.	Sci Rep	10.1038/s41598-019-46239-z	2019
Metabolism	The nucleotide messenger (p)ppGpp is an anti-inducer of the purine synthesis transcription regulator PurR in Bacillus.	Anderson BW, Schumacher MA, Yang J, Turdiev A, Turdiev H, Schroeder JW, He Q, Lee VT, Brennan RG, Wang JD.	Nucleic Acids Res	10.1093/nar/gkab1281	2022
	Secretion of poly-gamma-glutamic acid by Bacillus atrophaeus NX-12 enhanced its root colonization and biocontrol activity.	Xue J, Tong T, Wang R, Qiu Y, Gu Y, Sun L, Xu H, Lei P.	Front Microbiol	10.3389/fmicb.2022.972393	2022
	Comparative Study of Bacillus-Based Plant Biofertilizers: A Proposed Index.	Barros-Rodriguez A, Pacheco P, Penas-Corte M, Fernandez-Gonzalez AJ, Cobo-Diaz JF, Enrique-Cruz Y, Manzanera M.	Biology (Basel)	10.3390/biology13090668	2024
Metabolism	Resolving the conflict between antibiotic production and rapid growth by recognition of peptidoglycan of susceptible competitors.	Maan H, Itkin M, Malitsky S, Friedman J, Kolodkin-Gal I.	Nat Commun	10.1038/s41467-021-27904-2	2022
	Long-distance Transport in Bacterial Swarms Revealed by Single Nanoparticle Tracking.	Feng J, He Y.	Bio Protoc	10.21769/bioprotoc.3812	2020
	Methodologies for Studying B. subtilis Biofilms as a Model for Characterizing Small Molecule Biofilm Inhibitors.	Bucher T, Kartvelishvily E, Kolodkin-Gal I.	J Vis Exp	10.3791/54612	2016
	A prospectus of plant growth promoting endophytic bacterium from orchid (Vanda cristata).	Shah S, Chand K, Rekadwad B, Shouche YS, Sharma J, Pant B.	BMC Biotechnol	10.1186/s12896-021-00676-9	2021
	Encoding Membrane-Potential-Based Memory within a Microbial Community.	Yang CY, Bialecka-Fornal M, Weatherwax C, Larkin JW, Prindle A, Liu J, Garcia-Ojalvo J, Suel GM.	Cell Syst	10.1016/j.cels.2020.04.002	2020
	Promising role of Lawsonia inermis L. leaves extract and its nano-formulation as double treatment against aflatoxin toxicity in ulcerated-rats: Application in milk beverage.	Mohammed DM, El-Said MM, Badr AN, Abou Baker DH, Hathout AS, Sabry BA.	Heliyon	10.1016/j.heliyon.2023.e19290	2023
Pathogenicity	Swarming bacteria undergo localized dynamic phase transition to form stress-induced biofilms.	Grobas I, Polin M, Asally M.	Elife	10.7554/elife.62632	2021
Metabolism	YuaB functions synergistically with the exopolysaccharide and TasA amyloid fibers to allow biofilm formation by Bacillus subtilis.	Ostrowski A, Mehert A, Prescott A, Kiley TB, Stanley-Wall NR.	J Bacteriol	10.1128/jb.00223-11	2011
	Facultative cheating supports the coexistence of diverse quorum-sensing alleles.	Pollak S, Omer-Bendori S, Even-Tov E, Lipsman V, Bareia T, Ben-Zion I, Eldar A.	Proc Natl Acad Sci U S A	10.1073/pnas.1520615113	2016
Metabolism	Endophyte Bacillus subtilis evade plant defense by producing lantibiotic subtilomycin to mask self-produced flagellin.	Deng Y, Chen H, Li C, Xu J, Qi Q, Xu Y, Zhu Y, Zheng J, Peng D, Ruan L, Sun M.	Commun Biol	10.1038/s42003-019-0614-0	2019
	A Microfluidic Approach for Quantitative Study of Spatial Heterogeneity in Bacterial Biofilms.	Zhang Y, Cai Y, Zeng L, Liu P, Ma LZ, Liu J.	Small Sci	10.1002/smsc.202200047	2022
	Mitigating Milk-Associated Bacteria through Inducing Zinc Ions Antibiofilm Activity.	Hutchings C, Rajasekharan SK, Reifen R, Shemesh M.	Foods	10.3390/foods9081094	2020
Metabolism	Signal Percolation within a Bacterial Community.	Larkin JW, Zhai X, Kikuchi K, Redford SE, Prindle A, Liu J, Greenfield S, Walczak AM, Garcia-Ojalvo J, Mugler A, Suel GM.	Cell Syst	10.1016/j.cels.2018.06.005	2018
Metabolism	Induction of antibacterial proteins and peptides in the coprophilous mushroom Coprinopsis cinerea in response to bacteria.	Kombrink A, Tayyrov A, Essig A, Stockli M, Micheller S, Hintze J, van Heuvel Y, Durig N, Lin CW, Kallio PT, Aebi M, Kunzler M.	ISME J	10.1038/s41396-018-0293-8	2019
	Tracking Root Interactions System (TRIS) Experiment and Quality Control.	Massalha H, Korenblum E, Shapiro OH, Aharoni A.	Bio Protoc	10.21769/bioprotoc.3211	2019
Metabolism	Surfactin Stimulated by Pectin Molecular Patterns and Root Exudates Acts as a Key Driver of the Bacillus-Plant Mutualistic Interaction.	Hoff G, Arguelles Arias A, Boubsi F, Prsic J, Meyer T, Ibrahim HMM, Steels S, Luzuriaga P, Legras A, Franzil L, Lequart-Pillon M, Rayon C, Osorio V, de Pauw E, Lara Y, Deboever E, de Coninck B, Jacques P, Deleu M, Petit E, Van Wuytswinkel O, Ongena M.	mBio	10.1128/mbio.01774-21	2021
	A dynamic rhizosphere interplay between tree roots and soil bacteria under drought stress.	Oppenheimer-Shaanan Y, Jakoby G, Starr ML, Karliner R, Eilon G, Itkin M, Malitsky S, Klein T.	Elife	10.7554/elife.79679	2022
	Kin discrimination between sympatric Bacillus subtilis isolates.	Stefanic P, Kraigher B, Lyons NA, Kolter R, Mandic-Mulec I.	Proc Natl Acad Sci U S A	10.1073/pnas.1512671112	2015
	The Slowdown of Growth Rate Controls the Single-Cell Distribution of Biofilm Matrix Production via an SinI-SinR-SlrR Network.	Chen Z, Zarazua-Osorio B, Srivastava P, Fujita M, Igoshin OA.	mSystems	10.1128/msystems.00622-22	2023
Metabolism	The Bacillus subtilis tyrZ gene encodes a highly selective tyrosyl-tRNA synthetase and is regulated by a MarR regulator and T box riboswitch.	Williams-Wagner RN, Grundy FJ, Raina M, Ibba M, Henkin TM.	J Bacteriol	10.1128/jb.00008-15	2015
	Stochastic pulsing of gene expression enables the generation of spatial patterns in Bacillus subtilis biofilms.	Nadezhdin E, Murphy N, Dalchau N, Phillips A, Locke JCW.	Nat Commun	10.1038/s41467-020-14431-9	2020
	Pervasive prophage recombination occurs during evolution of spore-forming Bacilli.	Dragos A, Priyadarshini B, Hasan Z, Strube ML, Kempen PJ, Maroti G, Kaspar C, Bose B, Burton BM, Bischofs IB, Kovacs AT.	ISME J	10.1038/s41396-020-00854-1	2021
Genetics	Universally high transcript error rates in bacteria.	Li W, Lynch M.	Elife	10.7554/elife.54898	2020
	Impact of Fungal Hyphae on Growth and Dispersal of Obligate Anaerobic Bacteria in Aerated Habitats.	Xiong BJ, Kleinsteuber S, Strauber H, Dusny C, Harms H, Wick LY.	mBio	10.1128/mbio.00769-22	2022
	TnFLXopen: Markerless Transposons for Functional Fluorescent Fusion Proteins and Protein Interaction Prediction.	Dempwolff F, Kearns DB.	Microbiol Spectr	10.1128/spectrum.02428-21	2022
	An early mechanical coupling of planktonic bacteria in dilute suspensions.	Sretenovic S, Stojkovic B, Dogsa I, Kostanjsek R, Poberaj I, Stopar D.	Nat Commun	10.1038/s41467-017-00295-z	2017
Pathogenicity	Novel antibiofilm chemotherapies target nitrogen from glutamate and glutamine.	Hassanov T, Karunker I, Steinberg N, Erez A, Kolodkin-Gal I.	Sci Rep	10.1038/s41598-018-25401-z	2018
Metabolism	The FsrA sRNA and FbpB protein mediate the iron-dependent induction of the Bacillus subtilis lutABC iron-sulfur-containing oxidases.	Smaldone GT, Antelmann H, Gaballa A, Helmann JD.	J Bacteriol	10.1128/jb.05567-11	2012
	Single-cell analysis reveals individual spore responses to simulated space vacuum.	He L, Wang S, Cortesao M, Wu M, Moeller R, Setlow P, Li YQ.	NPJ Microgravity	10.1038/s41526-018-0059-7	2018
	Distribution and functional analysis of the phosphopantetheinyl transferase superfamily in Actinomycetales microorganisms.	Kim JH, Komatsu M, Shin-Ya K, Omura S, Ikeda H.	Proc Natl Acad Sci U S A	10.1073/pnas.1800715115	2018
	Evaluation of Antibacterial and Antifungal Properties of Alchornea laxiflora (Benth.) Pax. & Hoffman.	Akinpelu DA, Abioye EO, Aiyegoro OA, Akinpelu OF, Okoh AI.	Evid Based Complement Alternat Med	10.1155/2015/684839	2015
	Modeling of the Bacillus subtilis Bacterial Biofilm Growing on an Agar Substrate.	Wang X, Wang G, Hao M.	Comput Math Methods Med	10.1155/2015/581829	2015
	Dipeptide-Based Metabolic Labeling of Bacterial Cells for Endogenous Antibody Recruitment.	Fura JM, Pidgeon SE, Birabaharan M, Pires MM.	ACS Infect Dis	10.1021/acsinfecdis.6b00007	2016
Phylogeny	Multifaceted Interfaces of Bacterial Competition.	Stubbendieck RM, Straight PD.	J Bacteriol	10.1128/jb.00275-16	2016
Enzymology	Large scale identification of pellicle and cell-free liquid phase associated proteins in Bacillus amyloliquefaciens L-17.	Ouidir T, Hardouin J, Marcato-Romain CE, Girbal-Neuhauser E, Nait Chabane Y.	Curr Res Microb Sci	10.1016/j.crmicr.2025.100387	2025
Metabolism	Contributions of crust proteins to spore surface properties in Bacillus subtilis.	Shuster B, Khemmani M, Abe K, Huang X, Nakaya Y, Maryn N, Buttar S, Gonzalez AN, Driks A, Sato T, Eichenberger P.	Mol Microbiol	10.1111/mmi.14194	2019
	Comparison of Bacillus subtilis transcriptome profiles from two separate missions to the International Space Station.	Morrison MD, Fajardo-Cavazos P, Nicholson WL.	NPJ Microgravity	10.1038/s41526-018-0061-0	2019
Metabolism	Bacterial competition reveals differential regulation of the pks genes by Bacillus subtilis.	Vargas-Bautista C, Rahlwes K, Straight P.	J Bacteriol	10.1128/jb.01022-13	2014
	Liquid transport facilitated by channels in Bacillus subtilis biofilms.	Wilking JN, Zaburdaev V, De Volder M, Losick R, Brenner MP, Weitz DA.	Proc Natl Acad Sci U S A	10.1073/pnas.1216376110	2013
Metabolism	Surface Sensing for Paenibacillus sp. NAIST15-1 Flagellar Gene Expression on Solid Medium.	Kobayashi K, Kanesaki Y, Yoshikawa H.	Appl Environ Microbiol	10.1128/aem.00585-17	2017
Metabolism	Functional analysis of the accessory protein TapA in Bacillus subtilis amyloid fiber assembly.	Romero D, Vlamakis H, Losick R, Kolter R.	J Bacteriol	10.1128/jb.01363-13	2014
	Hampered motility promotes the evolution of wrinkly phenotype in Bacillus subtilis.	Richter A, Holscher T, Pausch P, Sehrt T, Brockhaus F, Bange G, Kovacs AT.	BMC Evol Biol	10.1186/s12862-018-1266-2	2018
	Molecular Evolutionary Dynamics of Energy Limited Microorganisms.	Shoemaker WR, Polezhaeva E, Givens KB, Lennon JT.	Mol Biol Evol	10.1093/molbev/msab195	2021
	A Novel Cell Type Enables B. subtilis to Escape from Unsuccessful Sporulation in Minimal Medium.	Defeu Soufo HJ.	Front Microbiol	10.3389/fmicb.2016.01810	2016
Metabolism	ABC transporter genes ABC-C6 and ABC-G33 alter plant-microbe-parasite interactions in the rhizosphere.	Cox DE, Dyer S, Weir R, Cheseto X, Sturrock M, Coyne D, Torto B, Maule AG, Dalzell JJ.	Sci Rep	10.1038/s41598-019-56493-w	2019
	Not so simple, not so subtle: the interspecies competition between Bacillus simplex and Bacillus subtilis and its impact on the evolution of biofilms.	Rosenberg G, Steinberg N, Oppenheimer-Shaanan Y, Olender T, Doron S, Ben-Ari J, Sirota-Madi A, Bloom-Ackermann Z, Kolodkin-Gal I.	NPJ Biofilms Microbiomes	10.1038/npjbiofilms.2015.27	2016
Metabolism	Metabolic co-dependence gives rise to collective oscillations within biofilms.	Liu J, Prindle A, Humphries J, Gabalda-Sagarra M, Asally M, Lee DY, Ly S, Garcia-Ojalvo J, Suel GM.	Nature	10.1038/nature14660	2015
	Preliminary phytochemical screening and antibacterial properties of crude stem bark extracts and fractions of Parkia biglobosa (Jacq.).	Abioye EO, Akinpelu DA, Aiyegoro OA, Adegboye MF, Oni MO, Okoh AI.	Molecules	10.3390/molecules18078485	2013
Metabolism	High throughput microencapsulation of Bacillus subtilis in semi-permeable biodegradable polymersomes for selenium remediation.	Barlow J, Gozzi K, Kelley CP, Geilich BM, Webster TJ, Chai Y, Sridhar S, van de Ven AL.	Appl Microbiol Biotechnol	10.1007/s00253-016-7896-7	2017
	Pectic homogalacturonan sensed by Bacillus acts as host associated cue to promote establishment and persistence in the rhizosphere.	Boubsi F, Hoff G, Arguelles Arias A, Steels S, Andric S, Anckaert A, Roulard R, Rigolet A, van Wuytswinkel O, Ongena M.	iScience	10.1016/j.isci.2023.107925	2023
Metabolism	Characterization of a Novel Iron Acquisition Activity That Coordinates the Iron Response with Population Density under Iron-Replete Conditions in Bacillus subtilis.	Roy EM, Griffith KL.	J Bacteriol	10.1128/jb.00487-16	2017
	Inhibition of bacterial attachment and biofilm formation by a novel intravenous catheter material using an in vitro percutaneous catheter insertion model.	Pathak R, Bierman SF, d'Arnaud P.	Med Devices (Auckl)	10.2147/mder.s183409	2018
Genetics	High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies.	Srivatsan A, Han Y, Peng J, Tehranchi AK, Gibbs R, Wang JD, Chen R.	PLoS Genet	10.1371/journal.pgen.1000139	2008
Metabolism	A novel factor controlling bistability in Bacillus subtilis: the YmdB protein affects flagellin expression and biofilm formation.	Diethmaier C, Pietack N, Gunka K, Wrede C, Lehnik-Habrink M, Herzberg C, Hubner S, Stulke J.	J Bacteriol	10.1128/jb.05360-11	2011
	Low Concentrations of Vitamin C Reduce the Synthesis of Extracellular Polymers and Destabilize Bacterial Biofilms.	Pandit S, Ravikumar V, Abdel-Haleem AM, Derouiche A, Mokkapati VRSS, Sihlbom C, Mineta K, Gojobori T, Gao X, Westerlund F, Mijakovic I.	Front Microbiol	10.3389/fmicb.2017.02599	2017
Metabolism	Viscous drag on the flagellum activates Bacillus subtilis entry into the K-state.	Diethmaier C, Chawla R, Canzoneri A, Kearns DB, Lele PP, Dubnau D.	Mol Microbiol	10.1111/mmi.13770	2017
Metabolism	Protein lysine acetylation plays a regulatory role in Bacillus subtilis multicellularity.	Reverdy A, Chen Y, Hunter E, Gozzi K, Chai Y.	PLoS One	10.1371/journal.pone.0204687	2018
	Biochemical characterization of immobilized recombinant subtilisin and synthesis and functional characterization of recombinant subtilisin capped silver and zinc oxide nanoparticles.	Shettar SS, Bagewadi ZK, Yunus Khan TM, Mohamed Shamsudeen S, Kolvekar HN.	Saudi J Biol Sci	10.1016/j.sjbs.2024.104009	2024
	Insights Into the Cultivable Microbial Ecology of "Manna" Ash Products Extracted From Fraxinus angustifolia (Oleaceae) Trees in Sicily, Italy.	Guarcello R, Gaglio R, Todaro A, Alfonzo A, Schicchi R, Cirlincione F, Moschetti G, Francesca N.	Front Microbiol	10.3389/fmicb.2019.00984	2019
Metabolism	Heterogeneity in respiratory electron transfer and adaptive iron utilization in a bacterial biofilm.	Qin Y, He Y, She Q, Larese-Casanova P, Li P, Chai Y.	Nat Commun	10.1038/s41467-019-11681-0	2019
	Metabolic basis of brain-like electrical signalling in bacterial communities.	Martinez-Corral R, Liu J, Prindle A, Suel GM, Garcia-Ojalvo J.	Philos Trans R Soc Lond B Biol Sci	10.1098/rstb.2018.0382	2019
	Spatio-temporal assembly of functional mineral scaffolds within microbial biofilms.	Oppenheimer-Shaanan Y, Sibony-Nevo O, Bloom-Ackermann Z, Suissa R, Steinberg N, Kartvelishvily E, Brumfeld V, Kolodkin-Gal I.	NPJ Biofilms Microbiomes	10.1038/npjbiofilms.2015.31	2016
	A versatile microfluidic platform measures hyphal interactions between Fusarium graminearum and Clonostachys rosea in real-time.	Gimeno A, Stanley CE, Ngamenie Z, Hsung MH, Walder F, Schmieder SS, Bindschedler S, Junier P, Keller B, Vogelgsang S.	Commun Biol	10.1038/s42003-021-01767-1	2021
	Genetic Analysis of Collective Motility of Paenibacillus sp. NAIST15-1.	Kobayashi K, Kanesaki Y, Yoshikawa H.	PLoS Genet	10.1371/journal.pgen.1006387	2016
Metabolism	Biosurfactant production and surface translocation are regulated by PlcR in Bacillus cereus ATCC 14579 under low-nutrient conditions.	Hsueh YH, Somers EB, Lereclus D, Ghelardi E, Wong AC.	Appl Environ Microbiol	10.1128/aem.00690-07	2007
	The presence of conjugative plasmid pLS20 affects global transcription of Its Bacillus subtilis host and confers beneficial stress resistance to cells.	Rosch TC, Golman W, Hucklesby L, Gonzalez-Pastor JE, Graumann PL.	Appl Environ Microbiol	10.1128/aem.03154-13	2014
Metabolism	Metabolic Remodeling during Biofilm Development of Bacillus subtilis.	Pisithkul T, Schroeder JW, Trujillo EA, Yeesin P, Stevenson DM, Chaiamarit T, Coon JJ, Wang JD, Amador-Noguez D.	mBio	10.1128/mbio.00623-19	2019
	OpuF, a New Bacillus Compatible Solute ABC Transporter with a Substrate-Binding Protein Fused to the Transmembrane Domain.	Teichmann L, Kummel H, Warmbold B, Bremer E.	Appl Environ Microbiol	10.1128/aem.01728-18	2018
	Syntheses, Characterization, Resolution, and Biological Studies of Coordination Compounds of Aspartic Acid and Glycine.	Aiyelabola T, Akinkunmi E, Ojo I, Obuotor E, Adebajo C, Isabirye D.	Bioinorg Chem Appl	10.1155/2017/2956145	2017
	Diversity, distribution, and antagonistic activities of rhizobacteria of Panax notoginseng.	Fan ZY, Miao CP, Qiao XG, Zheng YK, Chen HH, Chen YW, Xu LH, Zhao LX, Guan HL.	J Ginseng Res	10.1016/j.jgr.2015.05.003	2016
Metabolism	A complex of YlbF, YmcA and YaaT regulates sporulation, competence and biofilm formation by accelerating the phosphorylation of Spo0A.	Carabetta VJ, Tanner AW, Greco TM, Defrancesco M, Cristea IM, Dubnau D.	Mol Microbiol	10.1111/mmi.12186	2013
	Live imaging of root-bacteria interactions in a microfluidics setup.	Massalha H, Korenblum E, Malitsky S, Shapiro OH, Aharoni A.	Proc Natl Acad Sci U S A	10.1073/pnas.1618584114	2017
Metabolism	Bacillus subtilis biofilm induction by plant polysaccharides.	Beauregard PB, Chai Y, Vlamakis H, Losick R, Kolter R.	Proc Natl Acad Sci U S A	10.1073/pnas.1218984110	2013
Pathogenicity	Probable mechanisms of biocidal action of Cocos nucifera Husk extract and fractions on bacteria isolates.	Akinpelu DA, Alayande KA, Aiyegoro OA, Akinpelu OF, Okoh AI.	BMC Complement Altern Med	10.1186/s12906-015-0634-3	2015
	In-situ quantification of the interfacial rheological response of bacterial biofilms to environmental stimuli.	Ruhs PA, Boni L, Fuller GG, Inglis RF, Fischer P.	PLoS One	10.1371/journal.pone.0078524	2013
	Role of Hsp100/Clp Protease Complexes in Controlling the Regulation of Motility in Bacillus subtilis.	Moliere N, Hossmann J, Schafer H, Turgay K.	Front Microbiol	10.3389/fmicb.2016.00315	2016
	Sticking together: building a biofilm the Bacillus subtilis way.	Vlamakis H, Chai Y, Beauregard P, Losick R, Kolter R.	Nat Rev Microbiol	10.1038/nrmicro2960	2013
	Single-cell analysis of Bacillus subtilis biofilms using fluorescence microscopy and flow cytometry.	Garcia-Betancur JC, Yepes A, Schneider J, Lopez D.	J Vis Exp	10.3791/3796	2012
	Antagonistic action of Bacillus subtilis strain SG6 on Fusarium graminearum.	Zhao Y, Selvaraj JN, Xing F, Zhou L, Wang Y, Song H, Tan X, Sun L, Sangare L, Folly YM, Liu Y.	PLoS One	10.1371/journal.pone.0092486	2014
	Complete genome sequence of the motile actinomycete Actinoplanes missouriensis 431(T) (= NBRC 102363(T)).	Yamamura H, Ohnishi Y, Ishikawa J, Ichikawa N, Ikeda H, Sekine M, Harada T, Horinouchi S, Otoguro M, Tamura T, Suzuki K, Hoshino Y, Arisawa A, Nakagawa Y, Fujita N, Hayakawa M.	Stand Genomic Sci	10.4056/sigs.3196539	2012
Metabolism	MstX and a putative potassium channel facilitate biofilm formation in Bacillus subtilis.	Lundberg ME, Becker EC, Choe S.	PLoS One	10.1371/journal.pone.0060993	2013
Metabolism	Extracellular vesicles produced by the Gram-positive bacterium Bacillus subtilis are disrupted by the lipopeptide surfactin.	Brown L, Kessler A, Cabezas-Sanchez P, Luque-Garcia JL, Casadevall A.	Mol Microbiol	10.1111/mmi.12650	2014
	A multiphase theory for spreading microbial swarms and films.	Srinivasan S, Kaplan CN, Mahadevan L.	Elife	10.7554/elife.42697	2019
Pathogenicity	Colibactin: More Than a New Bacterial Toxin.	Fais T, Delmas J, Barnich N, Bonnet R, Dalmasso G.	Toxins (Basel)	10.3390/toxins10040151	2018
	A Synthetic Quorum Sensing System Reveals a Potential Private Benefit for Public Good Production in a Biofilm.	Zhang F, Kwan A, Xu A, Suel GM.	PLoS One	10.1371/journal.pone.0132948	2015
	Osmotic pressure can regulate matrix gene expression in Bacillus subtilis.	Rubinstein SM, Kolodkin-Gal I, McLoon A, Chai L, Kolter R, Losick R, Weitz DA.	Mol Microbiol	10.1111/j.1365-2958.2012.08201.x	2012
Pathogenicity	Vitamin C Pretreatment Enhances the Antibacterial Effect of Cold Atmospheric Plasma.	Helgadottir S, Pandit S, Mokkapati VR, Westerlund F, Apell P, Mijakovic I.	Front Cell Infect Microbiol	10.3389/fcimb.2017.00043	2017
	Spatio-temporal remodeling of functional membrane microdomains organizes the signaling networks of a bacterium.	Schneider J, Klein T, Mielich-Suss B, Koch G, Franke C, Kuipers OP, Kovacs AT, Sauer M, Lopez D.	PLoS Genet	10.1371/journal.pgen.1005140	2015
Metabolism	An accessory protein required for anchoring and assembly of amyloid fibres in B. subtilis biofilms.	Romero D, Vlamakis H, Losick R, Kolter R.	Mol Microbiol	10.1111/j.1365-2958.2011.07653.x	2011
Metabolism	An atypical orphan carbohydrate-NRPS genomic island encodes a novel lytic transglycosylase.	Guo X, Crawford JM.	Chem Biol	10.1016/j.chembiol.2014.07.025	2014
	Interspecies interactions induce exploratory motility in Pseudomonas aeruginosa.	Limoli DH, Warren EA, Yarrington KD, Donegan NP, Cheung AL, O'Toole GA.	Elife	10.7554/elife.47365	2019
	D-Amino Acid Probes for Penicillin Binding Protein-based Bacterial Surface Labeling.	Fura JM, Kearns D, Pires MM.	J Biol Chem	10.1074/jbc.m115.683342	2015
Metabolism	Evolution and multiplicity of arginine decarboxylases in polyamine biosynthesis and essential role in Bacillus subtilis biofilm formation.	Burrell M, Hanfrey CC, Murray EJ, Stanley-Wall NR, Michael AJ.	J Biol Chem	10.1074/jbc.m110.163154	2010
Genetics	MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities.	Cao L, Gurevich A, Alexander KL, Naman CB, Leao T, Glukhov E, Luzzatto-Knaan T, Vargas F, Quinn R, Bouslimani A, Nothias LF, Singh NK, Sanders JG, Benitez RAS, Thompson LR, Hamid MN, Morton JT, Mikheenko A, Shlemov A, Korobeynikov A, Friedberg I, Knight R, Venkateswaran K, Gerwick WH, Gerwick L, Dorrestein PC, Pevzner PA, Mohimani H.	Cell Syst	10.1016/j.cels.2019.09.004	2019
Metabolism	Comparative metabolomics and structural characterizations illuminate colibactin pathway-dependent small molecules.	Vizcaino MI, Engel P, Trautman E, Crawford JM.	J Am Chem Soc	10.1021/ja503450q	2014
Metabolism	Respiration control of multicellularity in Bacillus subtilis by a complex of the cytochrome chain with a membrane-embedded histidine kinase.	Kolodkin-Gal I, Elsholz AK, Muth C, Girguis PR, Kolter R, Losick R.	Genes Dev	10.1101/gad.215244.113	2013
Metabolism	In vivo characterization of the scaffold activity of flotillin on the membrane kinase KinC of Bacillus subtilis.	Schneider J, Mielich-Suss B, Bohme R, Lopez D.	Microbiology (Reading)	10.1099/mic.0.000137	2015
	Identification of Poly-N-acetylglucosamine as a Major Polysaccharide Component of the Bacillus subtilis Biofilm Matrix.	Roux D, Cywes-Bentley C, Zhang YF, Pons S, Konkol M, Kearns DB, Little DJ, Howell PL, Skurnik D, Pier GB.	J Biol Chem	10.1074/jbc.m115.648709	2015
	Deconvolving molecular signatures of interactions between microbial colonies.	Harn YC, Powers MJ, Shank EA, Jojic V.	Bioinformatics	10.1093/bioinformatics/btv251	2015
	Death Becomes Them: Bacterial Community Dynamics and Stilbene Antibiotic Production in Cadavers of Galleria mellonella Killed by Heterorhabditis and Photorhabdus spp.	Wollenberg AC, Jagdish T, Slough G, Hoinville ME, Wollenberg MS.	Appl Environ Microbiol	10.1128/aem.01211-16	2016
	A LuxS-dependent cell-to-cell language regulates social behavior and development in Bacillus subtilis.	Lombardia E, Rovetto AJ, Arabolaza AL, Grau RR.	J Bacteriol	10.1128/jb.00165-06	2006
	Fungi-on-a-Chip: microfluidic platforms for single-cell studies on fungi.	Richter F, Bindschedler S, Calonne-Salmon M, Declerck S, Junier P, Stanley CE.	FEMS Microbiol Rev	10.1093/femsre/fuac039	2022
Metabolism	Galactose metabolism plays a crucial role in biofilm formation by Bacillus subtilis.	Chai Y, Beauregard PB, Vlamakis H, Losick R, Kolter R.	mBio	10.1128/mbio.00184-12	2012
Metabolism	Ion channels enable electrical communication in bacterial communities.	Prindle A, Liu J, Asally M, Ly S, Garcia-Ojalvo J, Suel GM.	Nature	10.1038/nature15709	2015
Metabolism	Relation between chemotaxis and consumption of amino acids in bacteria.	Yang Y, M Pollard A, Hofler C, Poschet G, Wirtz M, Hell R, Sourjik V.	Mol Microbiol	10.1111/mmi.13006	2015
	Norspermidine is not a self-produced trigger for biofilm disassembly.	Hobley L, Kim SH, Maezato Y, Wyllie S, Fairlamb AH, Stanley-Wall NR, Michael AJ.	Cell	10.1016/j.cell.2014.01.012	2014
Metabolism	Nucleoid Size Scaling and Intracellular Organization of Translation across Bacteria.	Gray WT, Govers SK, Xiang Y, Parry BR, Campos M, Kim S, Jacobs-Wagner C.	Cell	10.1016/j.cell.2019.05.017	2019
Metabolism	Structured silicon for revealing transient and integrated signal transductions in microbial systems.	Gao X, Jiang Y, Lin Y, Kim KH, Fang Y, Fang Y, Yi J, Meng L, Lee HC, Lu Z, Leddy O, Zhang R, Tu Q, Feng W, Nair V, Griffin PJ, Shi F, Shekhawat GS, Dinner AR, Park HG, Tian B.	Sci Adv	10.1126/sciadv.aay2760	2020
	Deciphering a survival strategy during the interspecific competition between Bacillus cereus MSM-S1 and Pseudomonas sp. MSM-M1.	Chakraborty B, Mallick A, Annagiri S, Sengupta S, Sengupta TK.	R Soc Open Sci	10.1098/rsos.160438	2016
	Bacterial biofilm shows persistent resistance to liquid wetting and gas penetration.	Epstein AK, Pokroy B, Seminara A, Aizenberg J.	Proc Natl Acad Sci U S A	10.1073/pnas.1011033108	2011
	Bacillus subtilis as potential producer for polyhydroxyalkanoates.	Singh M, Patel SK, Kalia VC.	Microb Cell Fact	10.1186/1475-2859-8-38	2009
Enzymology	Bacillus subtilis two-component system sensory kinase DegS is regulated by serine phosphorylation in its input domain.	Jers C, Kobir A, Sondergaard EO, Jensen PR, Mijakovic I.	PLoS One	10.1371/journal.pone.0014653	2011
	Evidence for cyclic Di-GMP-mediated signaling in Bacillus subtilis.	Chen Y, Chai Y, Guo JH, Losick R.	J Bacteriol	10.1128/jb.01092-12	2012
	Antimicrobial and antioxidant activities of some Nigerian medicinal plants.	Aladesanmi AJ, Iwalewa EO, Adebajo AC, Akinkunmi EO, Taiwo BJ, Olorunmola FO, Lamikanra A.	Afr J Tradit Complement Altern Med	10.4314/ajtcam.v4i2.31206	2006
Metabolism	Genetic requirements for potassium ion-dependent colony spreading in Bacillus subtilis.	Kinsinger RF, Kearns DB, Hale M, Fall R.	J Bacteriol	10.1128/jb.187.24.8462-8469.2005	2005
Metabolism	CsrA-FliW interaction governs flagellin homeostasis and a checkpoint on flagellar morphogenesis in Bacillus subtilis.	Mukherjee S, Yakhnin H, Kysela D, Sokoloski J, Babitzke P, Kearns DB.	Mol Microbiol	10.1111/j.1365-2958.2011.07822.x	2011
	Characterization of Lactococcus lactis phage 949 and comparison with other lactococcal phages.	Samson JE, Moineau S.	Appl Environ Microbiol	10.1128/aem.00796-10	2010
Metabolism	The structure and assembly dynamics of plasmid actin AlfA imply a novel mechanism of DNA segregation.	Polka JK, Kollman JM, Agard DA, Mullins RD.	J Bacteriol	10.1128/jb.00676-09	2009
Genetics	Genome mining: Prediction of lipopeptides and polyketides from Bacillus and related Firmicutes.	Aleti G, Sessitsch A, Brader G.	Comput Struct Biotechnol J	10.1016/j.csbj.2015.03.003	2015
	Identification of regulatory RNAs in Bacillus subtilis.	Irnov I, Sharma CM, Vogel J, Winkler WC.	Nucleic Acids Res	10.1093/nar/gkq454	2010
	Identification and antibacterial evaluation of bioactive compounds from Garcinia kola (Heckel) seeds.	Seanego CT, Ndip RN.	Molecules	10.3390/molecules17066569	2012
Cultivation	A defined medium to investigate sliding motility in a Bacillus subtilis flagella-less mutant.	Fall R, Kearns DB, Nguyen T.	BMC Microbiol	10.1186/1471-2180-6-31	2006
Metabolism	Activity screening of carrier domains within nonribosomal peptide synthetases using complex substrate mixtures and large molecule mass spectrometry.	Dorrestein PC, Blackhall J, Straight PD, Fischbach MA, Garneau-Tsodikova S, Edwards DJ, McLaughlin S, Lin M, Gerwick WH, Kolter R, Walsh CT, Kelleher NL.	Biochemistry	10.1021/bi052333k	2006
	Control of cell fate by the formation of an architecturally complex bacterial community.	Vlamakis H, Aguilar C, Losick R, Kolter R.	Genes Dev	10.1101/gad.1645008	2008
Phenotype	Phenotypic Heterogeneity and the Evolution of Bacterial Life Cycles.	van Gestel J, Nowak MA.	PLoS Comput Biol	10.1371/journal.pcbi.1004764	2016
Metabolism	Functional Activation of the Flagellar Type III Secretion Export Apparatus.	Phillips AM, Calvo RA, Kearns DB.	PLoS Genet	10.1371/journal.pgen.1005443	2015
Genetics	Key Impact of an Uncommon Plasmid on Bacillus amyloliquefaciens subsp. plantarum S499 Developmental Traits and Lipopeptide Production.	Molinatto G, Franzil L, Steels S, Puopolo G, Pertot I, Ongena M.	Front Microbiol	10.3389/fmicb.2017.00017	2017
Metabolism	A long-term cultivation of an anaerobic methane-oxidizing microbial community from deep-sea methane-seep sediment using a continuous-flow bioreactor.	Aoki M, Ehara M, Saito Y, Yoshioka H, Miyazaki M, Saito Y, Miyashita A, Kawakami S, Yamaguchi T, Ohashi A, Nunoura T, Takai K, Imachi H.	PLoS One	10.1371/journal.pone.0105356	2014
Metabolism	Natural products version 2.0: connecting genes to molecules.	Walsh CT, Fischbach MA.	J Am Chem Soc	10.1021/ja909118a	2010
	The microbiological assay of cefuroxime.	Microbiology Division, Glaxo Research Ltd.	Proc R Soc Med	10.1177/00359157770700s946	1977
	Pharmacology of Cefuroxime as the 1-acetoxyethyl ester in volunteers.	Harding SM, Williams PE, Ayrton J.	Antimicrob Agents Chemother	10.1128/aac.25.1.78	1984
Genetics	Evaluation of the biofilm-forming ability and molecular characterization of dairy Bacillus spp. isolates.	Catania AM, Di Ciccio P, Ferrocino I, Civera T, Cannizzo FT, Dalmasso A.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1229460	2023
	Fast-Disintegrating Oral Films Containing Nisin-Loaded Niosomes.	Amer AA, Karkar Y, Bingle L, Elkordy AA, Chaw CS.	Molecules	10.3390/molecules30183715	2025
	Development of Vancomycin, a Glycopeptide Antibiotic, in a Suitable Nanoform for Oral Delivery.	Amer AA, Bingle L, Chaw CS, Elkordy AA.	Molecules	10.3390/molecules30071624	2025
Metabolism	A Mutation in the Bacillus subtilis rsbU Gene That Limits RNA Synthesis during Sporulation.	Rothstein DM, Lazinski D, Osburne MS, Sonenshein AL.	J Bacteriol	10.1128/jb.00212-17	2017
Enzymology	A disclosure gel for visual detection of live Bacillus anthracis spores.	Robinson CV, Bishop AH.	J Appl Microbiol	10.1111/jam.14226	2019
	Laccase from Aspergillus niger: A novel tool to graft multifunctional materials of interests and their characterization.	Iqbal HMN, Kyazze G, Tron T, Keshavarz T.	Saudi J Biol Sci	10.1016/j.sjbs.2016.01.027	2018
	Production and characterization of antimicrobial active substance from Spirulina platensis.	El-Sheekh MM, Daboor SM, Swelim MA, Mohamed S.	Iran J Microbiol		2014
Metabolism	Purification and characterization of a surfactin-like molecule produced by Bacillus sp. H2O-1 and its antagonistic effect against sulfate reducing bacteria.	Korenblum E, de Araujo LV, Guimaraes CR, de Souza LM, Sassaki G, Abreu F, Nitschke M, Lins U, Freire DM, Barreto-Bergter E, Seldin L.	BMC Microbiol	10.1186/1471-2180-12-252	2012
	Antibacterial activities of the extracts and conessine from Holarrhena floribunda G. Don. (Apocynaceae).	Bogne KP, Penlap BV, Lontsi D, Etoa FX.	Afr J Tradit Complement Altern Med	10.4314/ajtcam.v4i3.31229	2007
Metabolism	Bacterial flagellin promotes viral entry via an NF-kB and Toll Like Receptor 5 dependent pathway.	Benedikz EK, Bailey D, Cook CNL, Goncalves-Carneiro D, Buckner MMC, Blair JMA, Wells TJ, Fletcher NF, Goodall M, Flores-Langarica A, Kingsley RA, Madsen J, Teeling J, Johnston SL, MacLennan CA, Balfe P, Henderson IR, Piddock LJV, Cunningham AF, McKeating JA.	Sci Rep	10.1038/s41598-019-44263-7	2019
Phylogeny	Differences in the hybridization pattern of Bacillus subtilis genes coding for rDNA depend on the method of DNA preparation.	Waterhouse RN, Glover LA.	Appl Environ Microbiol	10.1128/aem.59.3.919-921.1993	1993
Genetics	DNA and protein sequence conservation at the replication terminus in Bacillus subtilis 168 and W23.	Lewis PJ, Wake RG.	J Bacteriol	10.1128/jb.171.3.1402-1408.1989	1989
	Mapping of rRNA genes with integrable plasmids in Bacillus subtilis.	LaFauci G, Widom RL, Eisner RL, Jarvis ED, Rudner R.	J Bacteriol	10.1128/jb.165.1.204-214.1986	1986
	Mechanism of the Heat Sensitization of Bacillus subtilis Spores by Ethidium Bromide.	Hanlin JH, Slepecky RA.	Appl Environ Microbiol	10.1128/aem.49.6.1396-1400.1985	1985
Phylogeny	New degenerate Cytophaga-Flexibacter-Bacteroides-specific 16S ribosomal DNA-targeted oligonucleotide probes reveal high bacterial diversity in River Taff epilithon.	O'Sullivan LA, Weightman AJ, Fry JC.	Appl Environ Microbiol	10.1128/aem.68.1.201-210.2002	2002
	Cell walls, peptidoglycans, and teichoic acids of Gram-positive bacteria as polyclonal inducers and immunomodulators of proliferative and lymphokine responses of human B and T lymphocytes.	Rasanen L, Arvilommi H.	Infect Immun	10.1128/iai.35.2.523-527.1982	1982
	Experimental induction of rheumatoid factor and joint lesions in rabbits after intravenous injections of killed bacteria.	Hanglow AC, Welsh CJ, Conn P, Pitts JM, Rampling A, Coombs RR.	Ann Rheum Dis	10.1136/ard.45.1.50	1986
Phylogeny	Differentiation of Campylobacter coli, Campylobacter jejuni, Campylobacter lari, and Campylobacter upsaliensis by a multiplex PCR developed from the nucleotide sequence of the lipid A gene lpxA.	Klena JD, Parker CT, Knibb K, Ibbitt JC, Devane PM, Horn ST, Miller WG, Konkel ME.	J Clin Microbiol	10.1128/jcm.42.12.5549-5557.2004	2004
Pathogenicity	New antibacterial agent isolated from the avocado pear.	Neeman I, Lifshitz A, Kashman Y.	Appl Microbiol	10.1128/am.19.3.470-473.1970	1970
Metabolism	Promoter recognition by phage SP01-modified RNA polymerase.	Talkington C, Pero J.	Proc Natl Acad Sci U S A	10.1073/pnas.75.3.1185	1978
Metabolism	Highly asymmetric transcription by RNA polymerase containing phage-SP01-induced polypeptides and a new host protein.	Pero J, Nelson J, Fox TD.	Proc Natl Acad Sci U S A	10.1073/pnas.72.4.1589	1975
Metabolism	Restriction cleavage map of SP01 DNA: general location of early, middle, and late genes.	Pero J, Hannett NM, Talkington C.	J Virol	10.1128/jvi.31.1.156-171.1979	1979
Enzymology	Molecular properties of succinate dehydrogenase isolated from Micrococcus luteus (lysodeikticus).	Crowe BA, Owen P.	J Bacteriol	10.1128/jb.153.3.1493-1501.1983	1983
	Electron microscopic study of membranes and walls of bacteria and changes occurring during growth initiation.	Hurst A, Stubbs JM.	J Bacteriol	10.1128/jb.97.3.1466-1479.1969	1969
	Change in the absorbancy of bacterial suspensions before initiation of growth.	Hurst A.	J Bacteriol	10.1128/jb.97.3.1062-1068.1969	1969
	CORRELATION BETWEEN BASE COMPOSITION OF DEOXYRIBONUCLEIC ACID AND AMINO ACID COMPOSITION OF PROTEIN.	Sueoka N.	Proc Natl Acad Sci U S A	10.1073/pnas.47.8.1141	1961
	Biocontrol potential of lipopeptides produced by the novel Bacillus subtilis strain Y17B against postharvest Alternaria fruit rot of cherry.	Ahmad T, Xing F, Nie C, Cao C, Xiao Y, Yu X, Moosa A, Liu Y.	Front Microbiol	10.3389/fmicb.2023.1150217	2023
	Antimicrobial and Antioxidant Efficacy of the Lipophilic Extract of Cirsium vulgare.	Aydin Kurc M, Orak HH, Gulen D, Caliskan H, Argon M, Sabudak T.	Molecules	10.3390/molecules28207177	2023
	s-Triazine Derivatives Functionalized with Alkylating 2-Chloroethylamine Fragments as Promising Antimicrobial Agents: Inhibition of Bacterial DNA Gyrases, Molecular Docking Studies, and Antibacterial and Antifungal Activity.	Maliszewski D, Demirel R, Wrobel A, Baradyn M, Ratkiewicz A, Drozdowska D.	Pharmaceuticals (Basel)	10.3390/ph16091248	2023
	Synthesis, Molecular Docking, Dynamics, Quantum-Chemical Computation, and Antimicrobial Activity Studies of Some New Benzimidazole-Thiadiazole Hybrids.	Celik I, Cevik UA, Karayel A, Isik A, Kayis U, Gul UD, Bostanci HE, Konca SF, Ozkay Y, Kaplancikli ZA.	ACS Omega	10.1021/acsomega.2c06142	2022
	Innovations and developments in single cell protein: Bibliometric review and patents analysis.	Ribeiro GO, Rodrigues LAP, Dos Santos TBS, Alves JPS, Oliveira RS, Nery TBR, Barbosa JDV, Soares MBP.	Front Microbiol	10.3389/fmicb.2022.1093464	2022
	Synthesis, DFT Calculations, In Silico Studies, and Antimicrobial Evaluation of Benzimidazole-Thiadiazole Derivatives.	Isik A, Acar Cevik U, Karayel A, Ahmad I, Patel H, Celik I, Gul UD, Bayazit G, Bostanci HE, Kocak A, Ozkay Y, Kaplancikli ZA.	ACS Omega	10.1021/acsomega.4c00543	2024
	Probiotic Characteristics of Lactobacillus brevis KT38-3 Isolated from an Artisanal Tulum Cheese.	Hacioglu S, Kunduhoglu B.	Food Sci Anim Resour	10.5851/kosfa.2021.e49	2021
	Enhancement Methods of Antioxidant Capacity in Rice Bran: A Review.	Andriani R, Subroto T, Ishmayana S, Kurnia D.	Foods	10.3390/foods11192994	2022
	Antimicrobial Activity of a Bacteriocin Produced by Enterococcus faecalis KT11 against Some Pathogens and Antibiotic-Resistant Bacteria.	Abanoz HS, Kunduhoglu B.	Korean J Food Sci Anim Resour	10.5851/kosfa.2018.e40	2018
	Functionalized Calixarenes as Promising Antibacterial Drugs to Face Antimicrobial Resistance.	Mourer M, Regnouf-de-Vains JB, Duval RE.	Molecules	10.3390/molecules28196954	2023
Metabolism	Long-Term Warming Alters Carbohydrate Degradation Potential in Temperate Forest Soils.	Pold G, Pold G, Billings AF, Blanchard JL, Burkhardt DB, Frey SD, Melillo JM, Schnabel J, van Diepen LT, DeAngelis KM.	Appl Environ Microbiol	10.1128/aem.02012-16	2016
	Inactivation of bglH, a key beta-glucosidase gene involved in isoflavone aglycone production, in Bacillus subtilis strain Miyagino.	Inagaki S.	Biosci Biotechnol Biochem	10.1093/bbb/zbaf115	2025
Phylogeny	Enhanced nattokinase production by optimized fermentation conditions of douchi-derived Bacillus subtilis natto NK11 and evaluation of its thrombolytic activity.	Ye Y, Yue W, Hu R, Li X, Li L, Chen Y, Li B, Li Z, Hong J.	Antonie Van Leeuwenhoek	10.1007/s10482-025-02198-2	2025
Genetics	A novel antimicrobial peptide NDYT-8 with broad-spectrum activity from Bacillus subtilis natto: Antibacterial mechanism and sequence simplification.	Yi Y, Liu D, Cheng C, Chen M, Coldea TE, Zhao H.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2025.111349	2025
	New insights into the role of cellular states, cell-secreted metabolites, and essential nutrients in biofilm formation and menaquinone-7 biosynthesis in Bacillus subtilis natto.	Yi Y, Chen M, Yang H, Zong X, Coldea TE, Zhao H.	Food Res Int	10.1016/j.foodres.2025.116052	2025
	New insights into the role of cellular states, cell-secreted metabolites, and essential nutrients in biofilm formation and menaquinone-7 biosynthesis in Bacillus subtilis natto	Yi Y, Chen M, Yang H, Zong X, Coldea TE, Zhao H.	Food Research International.		2025
	Scaling up biofilm bioreactors for enhanced menaquinone-7 production.	Berenjian A, Mahdinia E, Demirci A.	Bioprocess Biosyst Eng	10.1007/s00449-025-03155-z	2025
	Sequential fermentation of Ginkgo biloba seeds by Bacillus subtilis natto and Lactobacillus plantarum enhanced nutrition, flavor and lipid-lowering activity.	Bai Y, Fang X, Jiang Y, Xu J, Wu L, Li Q, Cao F, Zhao L.	J Sci Food Agric	10.1002/jsfa.14033	2025
	Genome Mining Reveals a Sactipeptide Biosynthetic Cluster in Staphylococcus pseudintermedius.	Elsakhawy OK, Abouelkhair MA.	Vet Sci	10.3390/vetsci12070635	2025
	Effects of quadric probiotic blends on rumen fermentation, nutrient degradability, and methane emission in sheep: an in vitro study.	Saleem ASA, Al-Marakby KM, Elaref MY, Bassiony SM, Helal AA, Abdel-Monem UM, Abdelnour SA.	AMB Express	10.1186/s13568-025-01955-w	2025
	Soy protein hydrolysates induce menaquinone-7 biosynthesis by enhancing the biofilm formation of Bacillus subtilis natto.	Yi Y, Chen M, Coldea TE, Yang H, Zhao H.	Food Microbiol	10.1016/j.fm.2024.104599	2024
	A bioprocess optimization study to enhance the production of Menaquinone-7 using Bacillus subtilis MM26.	M M, C SD.	Microb Cell Fact	10.1186/s12934-025-02735-8	2025
	Hyperproduction of nattokinase from Bacillus subtilis VIT MS2 using random mutagenesis and statistical optimization through central composite design.	S MK, V M, M M, C SD.	BMC Microbiol	10.1186/s12866-025-04150-w	2025
	Two-Component Response Regulators CitT, YvcP, and YycI Differentially Control Pectin and Hemicellulose Degradation in Degumming of Ramie Fibers by Bacillus subtilis Strain 168.	Yang Q, Ma S, Cheng L, Zhou X, Xi G, Chen C, Peng Z, Hu Y, Tan S, Duan S.	Polymers (Basel)	10.3390/polym17182473	2025
	Biological Characterization and Glucosinolate Degradation Mechanisms of Bacillus subtilis BSY82 in Rapeseed Meal.	Lu HY, Shi AN, Wang J, Liu LJ, Tang JY, Wang YJ, Zhu XZ, Zhang DF, Liu LY, Wang Q.	Aquac Nutr	10.1155/anu/3661772	2025
Enzymology	Poly-gamma-glutamic production by solid-state fermentation of Bacillus natto in ammonia nitrogen movement and soil water retention processes.	Wang X, Gao J, Wu J, Li X, Li J, Li H, Wang S.	Enzyme Microb Technol	10.1016/j.enzmictec.2024.110543	2025
	Enhanced Urea Production in the Diazotroph Azotobacter vinelandii as a Means of Stable Nitrogen Biofertiliser Production.	Barney BM, Dietz BR.	Microb Biotechnol	10.1111/1751-7915.70187	2025
	Effects of adding Bacillus subtilis natto NTU-18 in paste feed on growth, intestinal morphology, gastrointestinal microbiota diversity, immunity, and disease resistance of Anguilla japonica glass eels.	Lin YT, Hung YC, Chen LH, Lee KT, Han YS.	Fish Shellfish Immunol	10.1016/j.fsi.2024.109556	2024
	Probiotic-Vaccine Synergy in Fish Aquaculture: Exploring Microbiome-Immune Interactions for Enhanced Vaccine Efficacy.	Tayyab M, Islam W, Waqas W, Zhang Y.	Biology (Basel)	10.3390/biology14060629	2025
	Comparative genomics analysis and transposon mutagenesis provides new insights into high menaquinone-7 biosynthetic potential of Bacillus subtilis natto.	Jiang C, Zhao G, Wang H, Zheng W, Zhang R, Wang L, Zheng Z.	Gene	10.1016/j.gene.2024.148264	2024
	Sustainable menaquinone-7 production through continuous fermentation in biofilm bioreactors.	Berenjian A, Mahdinia E, Demirci A.	Bioprocess Biosyst Eng	10.1007/s00449-024-03040-1	2024
	Enhanced nattokinase production by Bacillus subtilis from glycerol and okara: optimization of culture medium via response surface methodology.	Duan Y, Du W, Xu Y, Guo G, Liu Z, Hao N.	Front Microbiol	10.3389/fmicb.2025.1577292	2025
	Bacillus subtilis natto NTU-18 attenuates atherosclerosis progression by modulating peripheral immune cell alterations.	Lin JD, Ye YZ, Wang SR, Kao WY, Lee KT.	Appl Microbiol Biotechnol	10.1007/s00253-025-13604-0	2025
	Degradation of Nonribosomal Peptide Synthetase Megasynthetases SrfAA and SrfAB by Acyldepsipeptide-Activated ClpP in Bacillus Subtilis.	Ishikawa F, Uchida C, Ohnishi R, Imai T, Tanabe G.	Chembiochem	10.1002/cbic.202500135	2025
	Probiotic supplementation in sustainable sheep production: impacts on health, performance, and methane mitigation.	Saleem ASA, Abdelnour S, Bassiony SM, Abdel-Monem UM, Elaref MY, Al-Marakby KM.	Trop Anim Health Prod	10.1007/s11250-025-04439-y	2025
	Filamentous structure of the CotVW complex, the crust proteins of the Bacillus subtilis endospore.	Jo E, Kim D, Baek Y, Park M, Lee H, Ha NC.	J Biol Chem	10.1016/j.jbc.2025.110714	2025
	Combination of SPH and SP80 prolongs the lifespan of Bacillus subtilis natto to enhance industrial menaquinone-7 biosynthesis.	Hu LX, Chen Y, Zhou HP, Tao W, Gao XL, Wu CC, Zhang HM, Han RM, Li YQ, Liu Y.	Front Microbiol	10.3389/fmicb.2025.1578160	2025
	Mfd deficiency decreases the abundance of complete transcripts of sporulation genes and alters sporogenesis and the structure of dormant Bacillus subtilis spores.	Martin HA, Heron R, Leyva-Sanchez H, Perez RK, Callaway A, Ermi T, Picard A, Grifaldo J, Barnes JL, Pedraza-Reyes M, Robleto EA.	Front Microbiol	10.3389/fmicb.2025.1680580	2025
	Bacterial Cytochrome P450 Involvement in the Biodegradation of Fluorinated Pyrethroids.	Khan MF, Liao J, Liu Z, Chugh G.	J Xenobiot	10.3390/jox15020058	2025
	Chlorophyllin-Mediated Photodynamic Inactivation: Dosage and Time Dependency in the Inhibition of Bacillus subtilis.	Pohland S, Vourvoutsiotou J, Brandtner L, Geissler D, Wiesmeth S, Scudlo V, Richter P, Burkovski A, Lebert M.	Microorganisms	10.3390/microorganisms13061189	2025
	Characterization of K-binding factor involved in water-soluble complex of menaquinone-7 produced by Bacillus subtilis natto.	Chatake T, Yanagisawa Y, Murakami R, Ohsugi T, Sumi H, Takata T, Okuda A, Morishima K, Inoue R, Sugiyama M.	J Biochem	10.1093/jb/mvad051	2023
	Enhancement of Menaquinone-7 production in Bacillus subtilis by optimizing the medium components through response surface methodology	Zhang R, Wang H, Wang L, Zheng Z.	Bioresour Bioprocess		2025
	Effects of Aqua-Glycerol Uptake Facilitator Protein GlpF on Spore Germination of Bacillus subtilis.	Cui T, Zhang Z, Mu K, Shi Y, Chen F, Dong L, Hu X.	Foods	10.3390/foods14050750	2025
	Fermentation of millet bran with Bacillus natto: enhancement of bioactivity levels and the bioactivity of bran extract.	Zhang S, Wang A, Lu Z, Lu F, Zhao H.	J Sci Food Agric	10.1002/jsfa.13455	2024
	Mechanism of lateral cell-wall expansion at a constant diameter in Bacillus subtilis.	Liang Y, Bellard L, Wong YS, Morlot C, Hugonnet JE, Rusconi F, Arthur M.	Nat Commun	10.1038/s41467-025-61900-0	2025
Enzymology	Functional Characterization of Two Glutamate Dehydrogenase Genes in Bacillus altitudinis AS19 and Optimization of Soluble Recombinant Expression.	Wang F, Lv X, Guo Z, Wang X, Long Y, Liu H.	Curr Issues Mol Biol	10.3390/cimb47080603	2025
	A Novel Fast HPLC-UV Method for Menaquinone-7 Determination in Fermentation Broth.	Celiento A, Giuliani A, Laini M, Longoni M, Rizzi G, Dei Nobili M.	ACS Omega	10.1021/acsomega.5c00483	2025
	The Significance of Probiotics in Aquaculture: A Review of Research Trend and Latest Scientific Findings.	Mohammed EAH, Ahmed AEM, Kovacs B, Pal K.	Antibiotics (Basel)	10.3390/antibiotics14030242	2025
	Biodegradation of Polyhydroxybutyrate, Polylactide, and Their Blends by Microorganisms, Including Antarctic Species: Insights from Weight Loss, XRD, and Thermal Studies.	Skorokhoda V, Semeniuk I, Peretyatko T, Kochubei V, Ivanukh O, Melnyk Y, Stetsyshyn Y.	Polymers (Basel)	10.3390/polym17050675	2025
	Simultaneous Expression of Recombinant Cellulase and Protease in An Indigenous Bacillus Cereus Strain.	Farhangi Z, Tabatabaee Yazdi F, Yakhchali B.	Iran J Biotechnol	10.30498/ijb.2024.427242.3840	2024
	Widely Targeted Metabolomics Revealed the Metabolic Basis of Physiological Function and Flavor of Natto.	Yin X, Wang X, Xu L, Zhao J, Li C, Lin J.	Metabolites	10.3390/metabo14120663	2024
	Increasing Vitamin K₂ Synthesis in Bacillus subtilis by Controlling the Expression of MenD and Stabilizing MenA.	Huang W, Li J, Zhu Q, Lv J, Zhu R, Pu C, Zhao H, Fu G, Zhang D.	J Agric Food Chem	10.1021/acs.jafc.4c07385	2024
Metabolism	Valorization of soybean pulp for sustainable alpha-ketoisocaproate production using engineered Bacillus subtilis whole-cell biocatalyst.	Huang E, Yan JS, Gicana RG, Chiang YR, Yeh FI, Huang CC, Wang PH.	Chemosphere	10.1016/j.chemosphere.2023.138200	2023
	Industrial-Scale Bioconversion of Three-Phase Residue by Musca domestica Larvae: Dynamics of Gut Microbiota and Their Ecological Driver.	Long W, Pang J, Yan W, Hu N.	Insects	10.3390/insects16070686	2025
	Dietary Bacillus subtilis benefits meat quality by regulating the muscle fiber type and antioxidant capacity of broilers.	Wang H, Xiao C, Li J, Liang R, Liu Y, Song Z, Buyse J, Zhu L.	Poult Sci	10.1016/j.psj.2024.104267	2024
	Process optimization and evaluation of quality properties of natto with co-culture of Bacillus subtilis natto and Limosilactobacillus fermentum.	Ma YN, Xu X, Chen LF, Zhou JP, Cao ZH, Lin QY.	Curr Res Microb Sci	10.1016/j.crmicr.2025.100347	2025
	Enhancing menaquinone-7 biosynthesis through strengthening precursor supply and product secretion.	Hu P, Peng C, Zhang B, Hu X, Milon RB, Ren L.	Bioprocess Biosyst Eng	10.1007/s00449-023-02955-5	2024
	Effective plasmid delivery to a plasmid-free Bacillus natto strain by a conjugational transfer system.	Itaya M, Sato M, Watanabe S, Kataoka M.	J Biochem	10.1093/jb/mvac069	2022
	Phosphorelay changes and plasticity underlie the life history evolution of Bacillus subtilis sporulation and germination in serial batch culture.	Sagarin KA, Ouanemalay E, Asante-Nyame H, Hong V, De Palo C, Cohan FM.	Microbiology (Reading)	10.1099/mic.0.001540	2025
Biotechnology	Mechanisms of Arsenic Interaction in Bacillus subtilis and Related Species with Biotechnological Potential.	Valenzuela-Garcia LI, Alarcon-Herrera MT, Cisneros-Lozano E, Pedraza-Reyes M, Ayala-Garcia VM.	Int J Mol Sci	10.3390/ijms262110277	2025
	Immunomodulatory effects of live and UV-killed Bacillus subtilis natto on inflammatory response in human colorectal adenocarcinoma cell line in vitro.	Abedi Elkhichi P, Aslanimehr M, Javadi A, Yadegar A.	Iran J Microbiol	10.18502/ijm.v16i4.16301	2024
	Comparative Secretory Efficiency of Two Chitosanase Signal Peptides from Bacillus subtilis in Escherichia coli.	Eom TY, Gang Y, Lee Y, Kang YH, Jo E, Marasinghe SD, Park HS, Park GH, Oh C.	J Microbiol	10.1007/s12275-024-00186-1	2024
Biotechnology	Identification and characterization of integrated prophages and CRISPR-Cas system in Bacillus subtilis RS10 genome.	Iqbal S, Begum F.	Braz J Microbiol	10.1007/s42770-024-01249-6	2024
	Research Progress of Nattokinase in Reducing Blood Lipid.	Wei C, Cai R, Song Y, Liu X, Xu HL.	Nutrients	10.3390/nu17111784	2025
Pathogenicity	Effects of Bacillus subtilis natto JLCC513 on gut microbiota and intestinal barrier function in obese rats.	Sun R, Niu H, Sun M, Miao X, Jin X, Xu X, Yanping C, Mei H, Wang J, Da L, Su Y.	J Appl Microbiol	10.1111/jam.15797	2022
	Fermentation of rose residue by Lactiplantibacillus plantarum B7 and Bacillus subtilis natto promotes polyphenol content and beneficial bioactivity.	Hu Y, Wang XY, Qin CQ, Li TT, Liu WH, Ren DF.	J Biosci Bioeng	10.1016/j.jbiosc.2022.08.002	2022
	Brij-58 supplementation enhances menaquinone-7 biosynthesis and secretion in Bacillus natto.	Yi Y, Jin X, Chen M, Coldea TE, Yang H, Zhao H.	Appl Microbiol Biotechnol	10.1007/s00253-023-12640-y	2023
	Surface display of the COE antigen of porcine epidemic diarrhoea virus on Bacillus subtilis spores.	Tian Y, Wang Z, Sun J, Gu J, Xu X, Cai X.	Microb Biotechnol	10.1111/1751-7915.14518	2024
	Crystal structure of the AlbEF complex involved in subtilosin A biosynthesis.	Ishida K, Nakamura A, Kojima S.	Structure	10.1016/j.str.2022.10.002	2022
	The influence of growth rate-controlling feeding strategy on the surfactin production in Bacillus subtilis bioreactor processes.	Hiller E, Off M, Hermann A, Vahidinasab M, Benatto Perino EH, Lilge L, Hausmann R.	Microb Cell Fact	10.1186/s12934-024-02531-w	2024
	Bacillus subtilis spores displaying Toxoplasma gondii GRA12 induce immunity against acute toxoplasmosis.	Sun HC, Yuan XF, Zhou W, Zhou ZJ, Su F, Fu Y, Hao LL, Liu X, Zhou X, Ye SY, Xu LH, Yu B, Li JX, Shi TY.	Front Immunol	10.3389/fimmu.2025.1457560	2025
	Transcriptomic analysis of gene expression of menaquinone-7 in Bacillus subtilis natto toward different oxygen supply	Peng C, Zhu S, Lu J, Hu X, Ren L.	Food Res Int		2022
	Exploring the potential of soapstock over a glycerol in vitamin K2 production by Bacillus subtilis natto: a comparative analysis.	Ansari F, Nouri H, Moghimi H.	Microb Cell Fact	10.1186/s12934-024-02629-1	2024
	New Bacillus subtilis vector, pSSbeta, as genetic tool for site-specific integration and excision of cloned DNA, and prophage elimination.	Suzuki S, Osada S, Imamura D, Sato T.	J Gen Appl Microbiol	10.2323/jgam.2021.10.004	2022
	Antioxidant capacity of fermented corn gluten meal in broiler chickens: a solid-state approach with mixed microbial fermentation.	Zhao Y, Deng Y, Guo T, Wu H, Lv T, Liu X.	Poult Sci	10.1016/j.psj.2024.104318	2024
	Antimicrobial potential of actinomycetes from high altitude Nepalese soils.	Aryal S, Adhikari R, Regmi B, Joshi DR.	Sci Rep	10.1038/s41598-025-09357-5	2025
	Single-strain probiotics enhance growth, anti-pathogen immunity, and resistance to Nocardia seriolae in grey mullet (Mugil cephalus) via gut microbiota modulation.	Chan CH, Chen LH, Chen KY, Chen IH, Lee KT, Lai LC, Tsai MH, Chuang EY, Lin MT, Yan TR.	Anim Microbiome	10.1186/s42523-024-00353-0	2024
	Revolutionary self-powered transducing mechanism for long-lasting and stable glucose monitoring: achieving selective and sensitive bacterial endospore germination in microengineered paper-based platforms.	Gao Y, Elhadad A, Choi S.	Microsyst Nanoeng	10.1038/s41378-024-00836-9	2024
	Soy protein degradation drives diversity of amino-containing compounds via Bacillus subtilis natto fermentation.	Zhang L, Wu JL, Xu P, Guo S, Zhou T, Li N.	Food Chem	10.1016/j.foodchem.2022.133034	2022
	Structural Characterization and Properties of Modified Soybean Meal Protein via Solid-State Fermentation by Bacillus subtilis.	Miao X, Niu H, Sun M, Li D, Hua M, Wang J, Su Y.	Molecules	10.3390/molecules28248015	2023
	Nattokinase-driven remodeling of tumor microenvironment enhances the efficacy of MSLN-targeted CAR-T cell therapy in solid tumors.	Zhao L, Zhang Y, Yang X, Chen T, Liu J, Guo Z.	Cancer Immunol Immunother	10.1007/s00262-025-04167-0	2025
	Systematic modulation of bacterial resource allocation by perturbing RNA polymerase availability via synthetic transcriptional switches.	Zhu M, Dai X.	Nucleic Acids Res	10.1093/nar/gkaf814	2025
Metabolism	Pan-genome-scale metabolic modeling of Bacillus subtilis reveals functionally distinct groups.	Neal M, Brakewood W, Betenbaugh M, Zengler K.	mSystems	10.1128/msystems.00923-24	2024
	A novel polysaccharide in the envelope of S. aureus influences the septal secretion of preproteins with a YSIRK/GXXS motif.	Ibrahim AM, Missiakas D.	J Bacteriol	10.1128/jb.00478-24	2025
	Biotransformation of Deoxynivalenol to the Novel Metabolite Deoxynivalenol-8,15-hemiketal-7-glucoside by the Bacillus subtilis Glycosyltransferase YjiC.	Hoogstra SJ, Renaud JB, McMullin DR, Kelman MJ, Garnham CP, Sumarah MW.	ACS Omega	10.1021/acsomega.5c01301	2025
	Enhanced anti-influenza activity of fermented yellow soybean extract and daidzein co-treatment on MDCK cells.	Noh M, Cho SY, Choi J, Song SH, Cho JY, Vaidya B, Kim D.	Food Sci Biotechnol	10.1007/s10068-024-01673-2	2025
	Quantitative analyses for several nutrients and volatile components during fermentation of soybean by Bacillus subtilis natto.	Chen X, Lu Y, Zhao A, Wu Y, Zhang Y, Yang X.	Food Chem	10.1016/j.foodchem.2021.131725	2022
	Co-production of surfactin and fengycin by Bacillus subtilis BBW1542 isolated from marine sediment: a promising biocontrol agent against foodborne pathogens.	Yan L, Li G, Liang Y, Tan M, Fang J, Peng J, Li K.	J Food Sci Technol	10.1007/s13197-023-05864-3	2024
	From Sea to Soil: Marine Bacillus subtilis enhancing chickpea production through in vitro and in vivo plant growth promoting traits.	Rathod K, Rana S, Dhandhukia P, Thakker JN.	Braz J Microbiol	10.1007/s42770-023-01238-1	2024
	Inhibition of nattokinase against the production of poly (gamma-glutamic Acid) in Bacillus subtilis natto	Wang L, Liu N, Yu C, Chen J, Hong K, Zang Y, Wang M, Nie G.	Biotechnol Lett		2021
	Molecular characterization and antifungal activity of lipopeptides produced from Bacillus subtilis against plant fungal pathogen Alternaria alternata.	Harish BN, Nagesha SN, Ramesh BN, Shyamalamma S, Nagaraj MS, Girish HC, Pradeep C, Shiva Kumar KS, Tharun Kumar KS, Pavan SN, Kavan Kumar V.	BMC Microbiol	10.1186/s12866-023-02922-w	2023
	Vitamin K (Menaquinone) from marine Kocuria sp. RAM1: optimization, characterization and potential in vitro biological activities	Metwally R, El-Sersy N, Sikaily A, Sabry S, Ghozlan H.	Microb Cell Fact		2025
	Serine peptidase Vpr forms enzymatically active fibrils outside Bacillus bacteria revealed by cryo-EM.	Cheng Y, Han J, Song M, Zhang S, Cao Q.	Nat Commun	10.1038/s41467-023-43359-z	2023
	Preparation of pH-sensitive carboxymethyl cellulose/chitosan/alginate hydrogel beads with reticulated shell structure to deliver Bacillus subtilis natto.	Wang M, Zang Y, Hong K, Zhao X, Yu C, Liu D, An Z, Wang L, Yue W, Nie G.	Int J Biol Macromol	10.1016/j.ijbiomac.2021.10.019	2021
	Harzianic acid exerts antimicrobial activity against Gram-positive bacteria and targets the cell membrane.	Ouyang X, Hoeksma J, Beenker WAG, van der Beek S, den Hertog J.	Front Microbiol	10.3389/fmicb.2024.1332774	2024
	Synthesis and biochemical characterization of naphthoquinone derivatives targeting bacterial histidine kinases.	Ishikawa T, Eguchi Y, Igarashi M, Okajima T, Mita K, Yamasaki Y, Sumikura K, Okumura T, Tabuchi Y, Hayashi C, Pasqua M, Coluccia M, Prosseda G, Colonna B, Kohayakawa C, Tani A, Haruta JI, Utsumi R.	J Antibiot (Tokyo)	10.1038/s41429-024-00726-2	2024
	Microbially induced calcium carbonate precipitation through CO₂ sequestration via an engineered Bacillus subtilis.	Gilmour KA, Ghimire PS, Wright J, Haystead J, Dade-Robertson M, Zhang M, James P.	Microb Cell Fact	10.1186/s12934-024-02437-7	2024
	Effect of AgNPs on PLA-Based Biocomposites with Polysaccharides: Biodegradability, Antibacterial Activity and Features.	Aleksanyan KV, Mastalygina EE, Smykovskaya RS, Samoilova NA, Novikov VA, Shakhov AM, Ryzhmanova YV, Kochkina GA, Ivanushkina NE.	Int J Mol Sci	10.3390/ijms262210916	2025
	Penicillium citrinum CFAM 521 Isolated From the Amazon Region: A Novel Source of a Fibrinolytic Enzyme.	de Souza TC, Schwarz MGA, da Silva DM, Maia CR, de Araujo CPM, Balieiro AADS, de Oliveira LA, Degrave WMS, Fernandes OCC, Mendonca-Lima L.	Int J Microbiol	10.1155/2024/5306083	2024
Biotechnology	Brown Algae as a Valuable Substrate for the Cost-Effective Production of Poly-gamma-Glutamic Acid for Applications in Cream Formulations.	Parati M, Philip C, Allinson SL, Mendrek B, Khalil I, Tchuenbou-Magaia F, Kowalczuk M, Adamus G, Radecka I.	Polymers (Basel)	10.3390/polym16142091	2024
	Secretion of the cytoplasmic and high molecular weight beta-galactosidase of Paenibacillus wynnii with Bacillus subtilis.	Senger J, Seitl I, Pross E, Fischer L.	Microb Cell Fact	10.1186/s12934-024-02445-7	2024
	Bacteria encode post-mortem protein catabolism that enables altruistic nutrient recycling.	Gibson SER, Frost I, Hierons SJ, Moses T, Poon WCK, West SA, Cann MJ.	Nat Commun	10.1038/s41467-025-56761-6	2025
	Comparison of four multilocus sequence typing schemes and amino acid biosynthesis based on genomic analysis of Bacillus subtilis.	Lee G, Heo S, Kim T, Na HE, Lee JH, Jeong DW.	PLoS One	10.1371/journal.pone.0282092	2023
	Changes in IgE binding capacity, structure, physicochemical properties of peanuts through fermentation with Bacillus natto and Lactobacillus plantarum along with autoclave pretreatment.	Pi X, Fu G, Yang Y, Wan Y, Xie M.	Food Chem	10.1016/j.foodchem.2022.133208	2022
	Surfactin inhibits enterococcal biofilm formation via interference with pilus and exopolysaccharide biosynthesis.	Wu CY, Huang HT, Chiang YT, Lee KT.	BMC Microbiol	10.1186/s12866-025-03786-y	2025
	Evaluation of the Immunity Responses in Mice to Recombinant Bacillus subtilis Displaying Newcastle Disease Virus HN Protein Truncations.	Li J, Yang M, Chen B, Wang Z, Cao Y, Yang Y, Zhang M, Zhang D, Ni X, Zeng Y, Pan K.	Microorganisms	10.3390/microorganisms12030439	2024
	A CRISPR-Cas9 system for knock-out and knock-in of high molecular weight DNA enables module-swapping of the pikromycin synthase in its native host.	Wang ZC, Stegall H, Miyazawa T, Keatinge-Clay AT.	Microb Cell Fact	10.1186/s12934-025-02741-w	2025
	DarA-the central processing unit for the integration of osmotic with potassium and amino acid homeostasis in Bacillus subtilis.	Warneke R, Herzberg C, Weiss M, Schramm T, Hertel D, Link H, Stulke J.	J Bacteriol	10.1128/jb.00190-24	2024
	Microbial biosurfactants: Green alternatives and sustainable solution for augmenting pesticide remediation and management of organic waste.	Markam SS, Raj A, Kumar A, Khan ML.	Curr Res Microb Sci	10.1016/j.crmicr.2024.100266	2024
Enzymology	Recombinant Bile Salt Hydrolase Enhances the Inhibition Efficiency of Taurodeoxycholic Acid against Clostridium perfringens Virulence.	Alenezi T, Alrubaye B, Fu Y, Shrestha J, Algehani S, Wang H, Liyanage R, Sun X.	Pathogens	10.3390/pathogens13060464	2024
Enzymology	Comprehensive biochemical, molecular and structural characterization of subtilisin with fibrinolytic potential in bioprocessing.	Shettar SS, Bagewadi ZK, Alasmary M, Mannasaheb BA, Shaikh IA, Khan AA.	Bioresour Bioprocess	10.1186/s40643-025-00860-1	2025
	Bacillus subtilis Induces Human Beta Defensin-2 Through its Lipoproteins in Human Intestinal Epithelial Cells.	So YJ, Park OJ, Kwon Y, Im J, Lee D, Yun SH, Cho K, Yun CH, Han SH.	Probiotics Antimicrob Proteins	10.1007/s12602-024-10224-4	2025
	Effective microorganism combinations improve the quality of compost-bedded pack products in heifer barns: exploring pack bacteria-fungi interaction mechanisms.	Zhang Z, Gu Y, Wang S, Zhen Y, Chen Y, Wang Y, Mao Y, Meng J, Duan Z, Xu J, Wang M.	BMC Microbiol	10.1186/s12866-024-03447-6	2024
Pathogenicity	Bifunctional mechanisms of autophagy and apoptosis regulations in melanoma from Bacillus subtilis natto fermentation extract.	Chou HY, Liu LH, Chen CY, Lin IF, Ali D, Yueh-Luen Lee A, David Wang HM.	Food Chem Toxicol	10.1016/j.fct.2021.112020	2021
Genetics	Metabolic Profile of the Genome-Reduced Bacillus subtilis Strain IIG-Bs-27-39: An Attractive Chassis for Recombinant Protein Production.	Aguilar Suarez R, Kohlstedt M, Oktem A, Neef J, Wu Y, Ikeda K, Yoshida KI, Altenbuchner J, Wittmann C, van Dijl JM.	ACS Synth Biol	10.1021/acssynbio.4c00254	2024
	Virtual screening, activity evaluation, and stability of pancreatic lipase inhibitors in the gastrointestinal degradation of nattokinase.	Yang L, Cao S, Xie M, Shi T.	Heliyon	10.1016/j.heliyon.2024.e24868	2024
	8-OxoG-Dependent Regulation of Global Protein Responses Leads to Mutagenesis and Stress Survival in Bacillus subtilis.	Martinez LE, Gomez G, Ramirez N, Franco B, Robleto EA, Pedraza-Reyes M.	Antioxidants (Basel)	10.3390/antiox13030332	2024
	Extensive cellular multi-tasking within Bacillus subtilis biofilms.	Yannarell SM, Beaudoin ES, Talley HS, Schoenborn AA, Orr G, Anderton CR, Chrisler WB, Shank EA.	mSystems	10.1128/msystems.00891-22	2023
	Broad-Spectrum Virus Elimination by Nasal Mucosa-Colonized Wild-Type Bacillus subtilis.	Li Y, Yang C, Tang R, Wang C, Li Y, Chao W, Cui A, Liang C, Duan Y, Zeng H, Yang Q.	Research (Wash D C)	10.34133/research.0781	2025
Phylogeny	Complete list of canonical post-transcriptional modifications in the Bacillus subtilis ribosome and their link to RbgA driven large subunit assembly.	Popova AM, Jain N, Dong X, Abdollah-Nia F, Britton RA, Williamson JR.	Nucleic Acids Res	10.1093/nar/gkae626	2024
Metabolism	Inhibition of nattokinase against the production of poly (gamma-glutamic Acid) in Bacillus subtilis natto.	Wang L, Liu N, Yu C, Chen J, Hong K, Zang Y, Wang M, Nie G.	Biotechnol Lett	10.1007/s10529-020-02941-x	2020
Transcriptome	A transcriptional plasticity-aware framework for RNA-seq differential expression analysis.	Bei C, Wang X, Gan M, Takiff HE, Rubin EJ, Zhu J, Gao Q, Liu Q.	Brief Bioinform	10.1093/bib/bbaf557	2025
	Cell immobilization for enhanced milk clotting enzyme production from Bacillus amyloliquefacien and cheese quality.	Karam EA, Hassan ME, Elattal NA, Kansoh AL, Esawy MA.	Microb Cell Fact	10.1186/s12934-024-02521-y	2024
	A functional dairy product rich in Menaquinone-7 and FeOOH nanoparticles	Novin D, van der Wel J, Seifan M, Ebrahiminezhad A, Ghasemi Y, Berenjian A.	Lebensm Wiss Technol	10.1016/j.lwt.2020.109564	2021
	Foldclass and Merizo-search: scalable structural similarity search for single- and multi-domain proteins using geometric learning.	Kandathil SM, Lau AM, Buchan DWA, Jones DT.	Bioinformatics	10.1093/bioinformatics/btaf277	2025
	Co-fermentation of lentils using lactic acid bacteria and Bacillus subtilis natto increases functional and antioxidant components.	Chen K, Gao C, Han X, Li D, Wang H, Lu F.	J Food Sci	10.1111/1750-3841.15349	2020
Enzymology	Discovery of a glyphosate oxidase in nature.	Ma M, Ardalan A, Van Dyk A, Charles TC, Horsman GP.	FEMS Microbiol Lett	10.1093/femsle/fnae086	2024
	Dietary Bacillus spp. supplementation to both sow and progenies improved post-weaning growth rate, gut function, and reduce the pro-inflammatory cytokine production in weaners challenged with Escherichia coli K88.	Sampath V, Cho S, Jeong J, Mun S, Lee CH, Hermes RG, Taechavasonyoo A, Smeets N, Kirwan S, Han K, Kim IH.	Anim Microbiome	10.1186/s42523-024-00290-y	2024
	Dietary live microorganisms and depression-driven mortality in hypertensive patients: NHANES 2005-2018.	Huang X, Hu L, Li J, Xie X, Meng C, Liu Y, Wei X.	J Health Popul Nutr	10.1186/s41043-025-00861-y	2025
	The effect of manipulating glucuronic acid biosynthetic pathway in Bacillus subtilis strain on hyaluronic acid production.	Afrasiabi S, Zanjani FSA, Ahmadian G, Cohan RA, Keramati M.	AMB Express	10.1186/s13568-023-01567-2	2023
	In vitro investigations on interference of selected probiotic candidates with Campylobacter jejuni adhesion and invasion of primary chicken derived cecal and Caco-2 cells.	Willer T, Han Z, Pielsticker C, Rautenschlein S.	Gut Pathog	10.1186/s13099-024-00623-x	2024
	Efficacy of Clostridium butyricum Supplementation Combined with Phototherapy for Neonatal Hyperbilirubinemia: A Systematic Review and Meta-Analysis.	Kim EJ, Go HY, Sung HK.	Microorganisms	10.3390/microorganisms13071441	2025
Transcriptome	Transcriptomic analysis of gene expression of menaquinone-7 in Bacillus subtilis natto toward different oxygen supply.	Peng C, Zhu S, Lu J, Hu X, Ren L.	Food Res Int	10.1016/j.foodres.2020.109700	2020
	The effect of aeration and mixing in developing a dairy-based functional food rich in menaquinone-7.	Novin D, van der Wel J, Seifan M, Berenjian A.	Bioprocess Biosyst Eng	10.1007/s00449-020-02366-w	2020
Genetics	A microfluidic platform for extraction and analysis of bacterial genomic DNA.	Joesaar A, Holub M, Lutze L, Emanuele M, Kerssemakers J, Pabst M, Dekker C.	Lab Chip	10.1039/d4lc00839a	2025
	Nutritional Health Perspective of Natto: A Critical Review.	Afzaal M, Saeed F, Islam F, Ateeq H, Asghar A, Shah YA, Ofoedu CE, Chacha JS.	Biochem Res Int	10.1155/2022/5863887	2022
	Research advances in the identification of regulatory mechanisms of surfactin production by Bacillus: a review.	Qiao J, Borriss R, Sun K, Zhang R, Chen X, Liu Y, Liu Y.	Microb Cell Fact	10.1186/s12934-024-02372-7	2024
	Prevalence and influencing factors of probiotic usage among colorectal cancer patients in China: A national database study.	Yao D, He W, Hu Y, Yuan Y, Xu H, Wang J, Dai H.	PLoS One	10.1371/journal.pone.0291864	2023
	Effect of nattokinase on the pathological conditions in streptozotocin induced diabetic rats.	Yamaguchi M, Fukuyama R, Fujita M.	Heliyon	10.1016/j.heliyon.2024.e28835	2024
	Motility in Periweissella Species: Genomic and Phenotypic Characterization and Update on Motility in Lactobacillaceae.	Fanelli F, Montemurro M, Chieffi D, Cho GS, Low HZ, Hille F, Franz CMAP, Fusco V.	Microorganisms	10.3390/microorganisms11122923	2023
	Characterization of the 3,4-Dichloroaniline Degradation Gene Cluster in Acinetobacter soli GFJ2.	Gibu N, Kasai D, Sato S, Tabata M, Vangnai A, Fukuda M.	Microorganisms	10.3390/microorganisms12030613	2024
Enzymology	Catalytic Synthesis of (S)-CHBE by Directional Coupling and Immobilization of Carbonyl Reductase and Glucose Dehydrogenase.	Wang Y, Sun R, Chen P, Wang F.	Biomolecules	10.3390/biom14040504	2024
	Safety evaluation of vitamin K2 (menaquinone-7) via toxicological tests.	Hwang SB, Choi MJ, Lee HJ, Han JJ.	Sci Rep	10.1038/s41598-024-56151-w	2024
Phylogeny	Comprehensive genomic analysis of Brevibacillus brevis BF19 reveals its biocontrol potential against bitter gourd wilt.	Song L, Shen Y, Zhang H, Zhang H, Zhang Y, Wang M, Zhang M, Wang F, Zhou L, Wen C, Zhao Y.	BMC Microbiol	10.1186/s12866-024-03519-7	2024
Enzymology	Identification of six important amino acid residues of MenA from Bacillus subtilis natto for enzyme activity and formation of menaquinone.	Hu LX, Feng JJ, Wu J, Li W, Gningue SM, Yang ZM, Wang Z, Liu Y, Xue ZL.	Enzyme Microb Technol	10.1016/j.enzmictec.2020.109583	2020
Metabolism	Production of fructooligosaccharides by Bacillus subtilis natto CCT7712 and their antiproliferative potential.	Magri A, Oliveira MR, Baldo C, Tischer CA, Sartori D, Mantovani MS, Celligoi MAPC.	J Appl Microbiol	10.1111/jam.14569	2020
	Nattokinase crude extract enhances oral mucositis healing.	Zhang J, Tang Y, Yuan T, Yang M, Fang W, Li L, Fei F, Gong A.	BMC Oral Health	10.1186/s12903-021-01914-4	2021
	Engineering Bacillus subtilis for production of 3-hydroxypropanoic acid.	Garg A, Jers C, Hwang HJ, Kalantari A, Ventina I, Mijakovic I.	Front Bioeng Biotechnol	10.3389/fbioe.2023.1101232	2023
	Evaluation of flavor properties in rice bran by solid-state fermentation with yeast	Wang Y, Liang H, Hu Z, Chen L, Zhu L, Zhuang K, Ding W, Shen Q.	Food Chem X		2025
Biotechnology	Safety Evaluation of Bacillus subtilis IDCC1101, Newly Isolated from Cheonggukjang, for Industrial Applications.	Kim SH, Yehuala GA, Bang WY, Yang J, Jung YH, Park MK.	Microorganisms	10.3390/microorganisms10122494	2022
	Evaluation of the prebiotic activities of edible starch films with the addition of nystose from Bacillus subtilis natto	Bersaneti GT, Garcia S, Mali S, Pedrine Colabone Celligoi MA.	Lebensm Wiss Technol		2019
	The ability of Bacillus subtilis and Bacillus natto to degrade zearalenone and its application in food	Ju J, Tinyiro SE, Yao W, Yu H, Guo Y, Qian H, Xie Y.	Journal of food processing and preservation.		2019
Metabolism	High poly-gamma-glutamic acid-containing natto improves lipid metabolism and alters intestinal microbiota in mice fed a high-fat diet.	Tamura M, Watanabe J, Noguchi T, Nishikawa T.	J Clin Biochem Nutr	10.3164/jcbn.23-35	2024
Biotechnology	A circular bioprocess application of algal-based substrate for Bacillus subtilis natto production of gamma-PGA.	Parati M, Philip C, Mendrek B, Townrow D, Khalil I, Tchuenbou-Magaia F, Stanley M, Kowalczuk M, Adamus G, Radecka I.	Front Chem	10.3389/fchem.2023.1158147	2023
Genetics	Exploring extreme environments in Türkiye for novel P450s through metagenomic analysis.	Mumcu H, Zaugg J, Keles I, Kayrav A, Balci N, Nelson DR, Hugenholtz P, Gillam EMJ, Gul Karaguler N.	PLoS One	10.1371/journal.pone.0330523	2025
Enzymology	Diverse origins of fibrinolytic enzymes: A comprehensive review.	Hazare C, Bhagwat P, Singh S, Pillai S.	Heliyon	10.1016/j.heliyon.2024.e26668	2024
	Preparation of Cellulose-Based Flocculant and Its Application in the Enrichment of Vitamin K₂ in Fermentation Supernatant.	Ma G, Zheng Z, Wang H, Wang L, Zhao G, Tang H, Ding X, Wang P.	Polymers (Basel)	10.3390/polym14122410	2022
	The Efficacy of Probiotics Supplementation on the Quality of Life of Patients with Gastrointestinal Disease: A Systematic Review of Clinical Studies.	Moludi J, Saber A, Zozani MA, Moradi S, Azamian Y, Hajiahmadi S, Pasdar Y, Moradi F.	Prev Nutr Food Sci	10.3746/pnf.2024.29.3.237	2024
	Study on the Effect of Radish Sprouts on Short-Chain Fatty Acids and Gut Microbial Diversity in Healthy Individuals.	Li R, Chen X, Shi C, Zhu Y.	Foods	10.3390/foods14020170	2025
Transcriptome	Effects of Alkali Stress on the Growth and Menaquinone-7 Metabolism of Bacillus subtilis natto.	Chen X, Shang C, Zhang H, Sun C, Zhang G, Liu L, Li C, Li A, Du P.	Front Microbiol	10.3389/fmicb.2022.899802	2022
	Isolation and characterization of a mycosubtilin homologue antagonizing Verticillium dahliae produced by Bacillus subtilis strain Z15.	Lin R, Zhang Q, Yin L, Zhang Y, Yang Q, Liu K, Wang Y, Han S, Zhao H, Zhao H.	PLoS One	10.1371/journal.pone.0269861	2022
	Effects of Bacillus subtilis Natto Strains on Antiviral Responses in Resiquimod-Stimulated Human M1-Phenotype Macrophages.	Fujii K, Kubo Y, Noguchi T, Tobita K.	Foods	10.3390/foods12020313	2023
	Enhancing Protease and Amylase Activities in Bacillus licheniformis XS-4 for Traditional Soy Sauce Fermentation Using ARTP Mutagenesis.	Zhang A, Ma Y, Deng Y, Zhou Z, Cao Y, Yang B, Bai J, Sun Q.	Foods	10.3390/foods12122381	2023
	A Paper-Based Wearable Moist-Electric Generator for Sustained High-Efficiency Power Output and Enhanced Moisture Capture.	Gao Y, Elhadad A, Choi S.	Small	10.1002/smll.202408182	2024
Genetics	Genomic and Phenotypic Insights into the Potential of Bacillus subtilis YB-15 Isolated from Rhizosphere to Biocontrol against Crown Rot and Promote Growth of Wheat.	Xu W, Yang Q, Xie X, Goodwin PH, Deng X, Zhang J, Sun R, Wang Q, Xia M, Wu C, Yang L.	Biology (Basel)	10.3390/biology11050778	2022
	Crystal structure report of the ImmR transcriptional regulator DNA-binding domain of the Bacillus subtilis ICEBs1 transposon.	Caliandro R, de Diego I, Gomis-Ruth FX.	Sci Rep	10.1038/s41598-022-09237-2	2022
	Radical S-Adenosylmethionine Sulfurtransferase MybB Catalyzed Formation of the 4-Thiazolidinone Core in Mycobacidin Represents an Intersection between Primary and Secondary Metabolism.	Zhao H, Bu J, Liu HW.	J Am Chem Soc	10.1021/jacs.4c13760	2025
	A single residue affects the dynamics and shape of a tetrameric GH43 beta-1,4-d-xylosidase from Levilactobacillus brevis DSM1269.	Linares-Pasten JA, Faryar R, Torrez Alvarez S, Albasri K, Shuoker B, Abou Hachem M, Logan DT, Karlsson EN.	Protein Sci	10.1002/pro.70299	2025
	Proteomic characterization of peanut flour fermented by Rhizopus oryzae.	Mattison CP, Dupre RA, Clermont K, Gibbons JG, Yu JH.	Heliyon	10.1016/j.heliyon.2024.e34793	2024
	The Genetic Determinants of Extreme UV Radiation and Desiccation Tolerance in a Bacterium Recovered from the Stratosphere.	Ellington AJ, Schult TJ, Reisch CR, Christner BC.	Microorganisms	10.3390/microorganisms13040756	2025
	Evaluation of Hypoglycemic and Antioxidant Activities of Soybean Meal Products Fermented by Lactobacillus plantarum FPS 2520 and Bacillus subtilis N1 in Rats Fed with High-Fat Diet.	Huang CH, Chen CL, Shieh CC, Chang SH, Tsai GJ.	Metabolites	10.3390/metabo12050442	2022
Enzymology	Improvement of menaquinone-7 production by Bacillus subtilis natto in a novel residue-free medium by increasing the redox potential.	Wang H, Liu H, Wang L, Zhao G, Tang H, Sun X, Ni W, Yang Q, Wang P, Zheng Z.	Appl Microbiol Biotechnol	10.1007/s00253-019-10044-5	2019
	Wild Hops in Breadmaking Among Bulgarians: From History to Modern Perspectives and Future Potentials.	Nedelcheva A, Zocchi DM, Sulaiman N, Soukand R, Pieroni A, Pasqualone A.	Foods	10.3390/foods14101767	2025
	Effect of Adding Bifidobacterium animalis BZ25 on the Flavor, Functional Components and Biogenic Amines of Natto by Bacillus subtilis GUTU09.	Zhang Q, Lan G, Tian X, He L, Li C, Tao H, Zeng X, Wang X.	Foods	10.3390/foods11172674	2022
Metabolism	Efficient modification of the Pseudomonas aeruginosa toxin 2-heptyl-1-hydroxyquinolin-4-one by three Bacillus glycosyltransferases with broad substrate ranges.	Thierbach S, Sartor P, Yucel O, Fetzner S.	J Biotechnol	10.1016/j.jbiotec.2019.11.015	2020
	Effects of Bacillus subtilis Natto NB205 and Its Mutant NBMK308 on Egg Quality in Aging Laying Hens.	Liao C, Cui J, Lei J, Guo Y, Zhang B.	Life (Basel)	10.3390/life13051109	2023
	Regulation of prophage induction and lysogenization by phage communication systems.	Bruce JB, Lion S, Buckling A, Westra ER, Gandon S.	Curr Biol	10.1016/j.cub.2021.08.073	2021
	Fermented jellyfish (Rhopilema esculentum) collagen enhances antioxidant activity and cartilage protection on surgically induced osteoarthritis in obese rats.	Sudirman S, Chen CY, Chen CK, Felim J, Kuo HP, Kong ZL.	Front Pharmacol	10.3389/fphar.2023.1117893	2023
	Hyaluronic acid production and characterization by novel Bacillus subtilis harboring truncated Hyaluronan Synthase.	Amjad Zanjani FS, Afrasiabi S, Norouzian D, Ahmadian G, Hosseinzadeh SA, Fayazi Barjin A, Cohan RA, Keramati M.	AMB Express	10.1186/s13568-022-01429-3	2022
Genetics	Prokaryotic and viral genomes recovered from 787 Japanese gut metagenomes revealed microbial features linked to diets, populations, and diseases.	Tomofuji Y, Kishikawa T, Maeda Y, Ogawa K, Otake-Kasamoto Y, Kawabata S, Nii T, Okuno T, Oguro-Igashira E, Kinoshita M, Takagaki M, Oyama N, Todo K, Yamamoto K, Sonehara K, Yagita M, Hosokawa A, Motooka D, Matsumoto Y, Matsuoka H, Yoshimura M, Ohshima S, Shinzaki S, Nakamura S, Iijima H, Inohara H, Kishima H, Takehara T, Mochizuki H, Takeda K, Kumanogoh A, Okada Y.	Cell Genom	10.1016/j.xgen.2022.100219	2022
	Influence of host-specific and locally isolated multi-strain probiotics on piglet performance, mortality, inflammatory response, and gut microbiome.	Sahatsanon K, Sivapirunthep P, Sringarm K, Arjin C, Hnokaew P, Chaweewan K, Chaosap C.	Anim Biosci	10.5713/ab.24.0556	2025
	Ligand-binding pockets in RNA and where to find them.	Veenbaas SD, Koehn JT, Irving PS, Lama NN, Weeks KM.	Proc Natl Acad Sci U S A	10.1073/pnas.2422346122	2025
	Coproduction of menaquinone-7 and nattokinase by Bacillus subtilis using soybean curd residue as a renewable substrate combined with a dissolved oxygen control strategy	Wang H, Sun X, Wang L, Wu H, Zhao G, Liu H, Wang P, Zheng Z.	Ann Microbiol		2018
	Determination of 14 Isoflavone Isomers in Natto by UPLC-ESI-MS/MS and Antioxidation and Antiglycation Profiles.	Xiang A, Wang J, Xie B, Hu K, Chen M, Sun Z.	Foods	10.3390/foods11152229	2022
	Preclinical Safety Assessment of Bacillus subtilis BS50 for Probiotic and Food Applications.	Brutscher LM, Borgmeier C, Garvey SM, Spears JL.	Microorganisms	10.3390/microorganisms10051038	2022
	6-Bromoindole- and 6-Bromoindazole-Based Inhibitors of Bacterial Cystathionine gamma-Lyase Containing 3-Aminothiophene-2-Carboxylate Moiety.	Novikov RA, Platonov DN, Belyy AY, Potapov KV, Novikov MA, Tomilov YV, Kechko OI, Seregina TA, Zemskaya AS, Solyev PN, Mitkevich VA.	Molecules	10.3390/molecules30020388	2025
Biotechnology	Adaptation of the binding domain of Lactobacillus acidophilus S-layer protein as a molecular tag for affinity chromatography development.	Muruaga EJ, Uriza PJ, Eckert GAK, Pepe MV, Duarte CM, Roset MS, Briones G.	Front Microbiol	10.3389/fmicb.2023.1210898	2023
	Enhancing menaquinone-7 biosynthesis by adaptive evolution of Bacillus natto through chemical modulator.	Zhang B, Peng C, Lu J, Hu X, Ren L.	Bioresour Bioprocess	10.1186/s40643-022-00609-0	2022
	Biodegradable Interpolycomplexes for Anti-Erosion Stabilization of Soil and Sand.	Novoskoltseva OA, Belov AA, Loiko NG, Nikolaev YA, Panova IG, Yaroslavov AA.	Polymers (Basel)	10.3390/polym14245383	2022
	Sorption of Cellulases in Biofilm Enhances Cellulose Degradation by Bacillus subtilis.	Deng Y, Wang SY.	Microorganisms	10.3390/microorganisms10081505	2022
	Optimization of subtilisin production from Bacillus subtilis strain ZK3 and biological and molecular characterization of synthesized subtilisin capped nanoparticles.	Shettar SS, Bagewadi ZK, Kolvekar HN, Yunus Khan TM, Shamsudeen SM.	Saudi J Biol Sci	10.1016/j.sjbs.2023.103807	2023
	A novel method for transforming Geobacillus kaustophilus with a chromosomal segment of Bacillus subtilis transferred via pLS20-dependent conjugation.	Mori K, Fukui K, Amatsu R, Ishikawa S, Verrone V, Wipat A, Meijer WJJ, Yoshida KI.	Microb Cell Fact	10.1186/s12934-022-01759-8	2022
	Evaluation of MENAQUINONE-7 and fat-soluble vitamin production by starter cultures during fermentation in dairy products using RPLC method.	Altuncu V, Kaymaz A, Ertekin Filiz B, Cubuk Demiralay E, Kok Tas T.	Food Sci Nutr	10.1002/fsn3.4474	2024
	Intrinsic tet(L) sub-class in Bacillus velezensis and Bacillus amyloliquefaciens is associated with a reduced susceptibility toward tetracycline.	Nohr-Meldgaard K, Struve C, Ingmer H, Agerso Y.	Front Microbiol	10.3389/fmicb.2022.966016	2022
	Genome Sequence of Bacillus subtilis natto VK161, a Novel Strain That Produces Vitamin K₂.	Parks D, Chung IH, Lee IK, Kim EJ, Niraula S, Chang WS.	Microbiol Resour Announc	10.1128/mra.00444-19	2019
	Surfactin Shows Relatively Low Antimicrobial Activity against Bacillus subtilis and Other Bacterial Model Organisms in the Absence of Synergistic Metabolites.	Lilge L, Ersig N, Hubel P, Aschern M, Pillai E, Klausmann P, Pfannstiel J, Henkel M, Morabbi Heravi K, Hausmann R.	Microorganisms	10.3390/microorganisms10040779	2022
	Identification of a novel 5-aminomethyl-2-thiouridine methyltransferase in tRNA modification.	Cho G, Lee J, Kim J.	Nucleic Acids Res	10.1093/nar/gkad048	2023
	Extracellular proteolysis of tandemly duplicated pheromone propeptides affords additional complexity to bacterial quorum sensing.	Felipe-Ruiz A, Zamora-Caballero S, Bendori SO, Penades JR, Eldar A, Marina A.	PLoS Biol	10.1371/journal.pbio.3002744	2024
Phylogeny	Fluctuations in Intestinal Microbiota Following Ingestion of Natto Powder Containing Bacillus subtilis var. natto SONOMONO Spores: Considerations Using a Large-Scale Intestinal Microflora Database.	Kono K, Murakami Y, Ebara A, Okuma K, Tokuno H, Odachi A, Ogasawara K, Hidaka E, Mori T, Satoh K, Kimoto S, Masuyama H, Takeda M, Managi S.	Nutrients	10.3390/nu14183839	2022
Metabolism	Implementation of fed-batch strategies for vitamin K (menaquinone-7) production by Bacillus subtilis natto in biofilm reactors.	Mahdinia E, Demirci A, Berenjian A.	Appl Microbiol Biotechnol	10.1007/s00253-018-9340-7	2018
	Impact of Bacillus in fermented soybean foods on human health.	Gopikrishna T, Suresh Kumar HK, Perumal K, Elangovan E.	Ann Microbiol	10.1186/s13213-021-01641-9	2021
	Bacillus subtilis YtpP and Thioredoxin A Are New Players in the Coenzyme-A-Mediated Defense Mechanism against Cellular Stress.	Tossounian MA, Baczynska M, Dalton W, Peak-Chew SY, Undzenas K, Korza G, Filonenko V, Skehel M, Setlow P, Gout I.	Antioxidants (Basel)	10.3390/antiox12040938	2023
	Using probiotics to improve nutrient digestibility and gut-health of weaned pigs: a comparison of maternal and nursery supplementation strategies.	Galli GM, Andretta I, Levesque C, Stefanello T, Carvalho CL, Perez Pelencia JY, Bueno Martins G, Souza de Lima Cony B, Romeiro de Oliveira C, Franceschi CH, Kipper M.	Front Vet Sci	10.3389/fvets.2024.1356455	2024
	Effects of pH and Osmotic Changes on the Metabolic Expressions of Bacillus subtilis Strain 168 in Metabolite Pathways including Leucine Metabolism.	Park MK, Lee S, Kim YS.	Metabolites	10.3390/metabo12020112	2022
Genetics	A Comparative Analysis of the Core Proteomes within and among the Bacillus subtilis and Bacillus cereus Evolutionary Groups Reveals the Patterns of Lineage- and Species-Specific Adaptations.	Nikolaidis M, Hesketh A, Mossialos D, Iliopoulos I, Oliver SG, Amoutzias GD.	Microorganisms	10.3390/microorganisms10091720	2022
Metabolism	Effects of medium components in a glycerol-based medium on vitamin K (menaquinone-7) production by Bacillus subtilis natto in biofilm reactors.	Mahdinia E, Demirci A, Berenjian A.	Bioprocess Biosyst Eng	10.1007/s00449-018-2027-8	2019
	Antibacterial Activity of Isobavachalcone (IBC) Is Associated with Membrane Disruption.	Assis LR, Theodoro RDS, Costa MBS, Nascentes JAS, Rocha MDD, Bessa MAS, Menezes RP, Dilarri G, Hypolito GB, Santos VRD, Duque C, Ferreira H, Martins CHG, Regasini LO.	Membranes (Basel)	10.3390/membranes12030269	2022
Metabolism	Development of fermented chestnut with Bacillus natto: Functional and sensory properties.	Dong MZ, An JY, Wang LT, Fan XH, Lv MJ, Zhu YW, Chang YH, Meng D, Yang Q, Fu YJ.	Food Res Int	10.1016/j.foodres.2019.108941	2020
	High-Efficiency Fermentation of Nattokinase by Recombinant PSP2 Using Oyster Protein Hydrolysate as a Substrate.	Tian M, Ning C, Peng S, Li D, Jin R, Zhang Y, Liu Z, Mou H, Zhu C.	Foods	10.3390/foods12061252	2023
	Effect of Fermentation Parameters on Natto and Its Thrombolytic Property.	Yang Y, Lan G, Tian X, He L, Li C, Zeng X, Wang X.	Foods	10.3390/foods10112547	2021
	Research on Phenolic Content and Its Antioxidant Activities in Fermented Rosa rugosa 'Dianhong' Petals with Brown Sugar.	Cai Y, Abla M, Gao L, Wu J, Yang L.	Antioxidants (Basel)	10.3390/antiox13050607	2024
	Predicting stress response and improved protein overproduction in Bacillus subtilis.	Tibocha-Bonilla JD, Zuniga C, Lekbua A, Lloyd C, Rychel K, Short K, Zengler K.	NPJ Syst Biol Appl	10.1038/s41540-022-00259-0	2022
	Optimization of EPA-Nattokinase Nanoemulsions Processed by High-Pressure Homogenization to Enhance Stability and Thrombolytic Efficacy.	Wang J, Xu S, Chen L, Zheng P, Song R, Song Y, Sun J, Zhang B.	Foods	10.3390/foods14203482	2025
	Study on preparation of chickpea peptide and its effect on blood glucose.	Ma X, Fan X, Wang D, Li X, Wang X, Yang J, Qiu C, Liu X, Pang G, Abra R, Wang L.	Front Nutr	10.3389/fnut.2022.988628	2022
Genetics	A model industrial workhorse: Bacillus subtilis strain 168 and its genome after a quarter of a century.	Bremer E, Calteau A, Danchin A, Harwood C, Helmann JD, Medigue C, Palsson BO, Sekowska A, Vallenet D, Zuniga A, Zuniga C.	Microb Biotechnol	10.1111/1751-7915.14257	2023
Metabolism	Enhanced Vitamin K (Menaquinone-7) Production by Bacillus subtilis natto in Biofilm Reactors by Optimization of Glucose-based Medium.	Mahdinia E, Demirci A, Berenjian A.	Curr Pharm Biotechnol	10.2174/1389201020666181126120401	2018
	Invited review: Remediation strategies for mycotoxin control in feed.	Liu M, Zhao L, Gong G, Zhang L, Shi L, Dai J, Han Y, Wu Y, Khalil MM, Sun L.	J Anim Sci Biotechnol	10.1186/s40104-021-00661-4	2022
	Soluble expression of recombinant active cellulase in E.coli using B.subtilis (natto strain) cellulase gene.	Vadala BS, Deshpande S, Apte-Deshpande A.	J Genet Eng Biotechnol	10.1186/s43141-020-00103-0	2021
Pathogenicity	Myristic Acid Inhibits the Activity of the Bacterial ABC Transporter BmrA.	Oepen K, Ozbek H, Schuffler A, Liermann JC, Thines E, Schneider D.	Int J Mol Sci	10.3390/ijms222413565	2021
	In vitro and in vivo antioxidant activities of soy protein isolate fermented with Bacillus subtilis natto.	Zhang X, Sun X, Li W, Huang X, Tao L, Li T, Li S.	J Food Sci Technol	10.1007/s13197-020-04823-6	2021
Metabolism	Improved physicochemical and functional properties of dietary fiber from millet bran fermented by Bacillus natto.	Chu J, Zhao H, Lu Z, Lu F, Bie X, Zhang C.	Food Chem	10.1016/j.foodchem.2019.05.035	2019
	Optimization of Bacillus subtilis natto growth parameters in glycerol-based medium for vitamin K (Menaquinone-7) production in biofilm reactors.	Mahdinia E, Demirci A, Berenjian A.	Bioprocess Biosyst Eng	10.1007/s00449-017-1857-0	2018
	Activity-Induced Enhancement of Superdiffusive Transport in Bacterial Turbulence.	Xie C, Liu Y, Luo H, Jing G.	Micromachines (Basel)	10.3390/mi13050746	2022
	New Antimicrobial Peptide with Two CRAC Motifs: Activity against Escherichia coli and Bacillus subtilis.	Koksharova O, Safronova N, Dunina-Barkovskaya A.	Microorganisms	10.3390/microorganisms10081538	2022
Transcriptome	Understanding the Effect of Different Glucose Concentrations in the Oligotrophic Bacterium Bacillus subtilis BS-G1 through Transcriptomics Analysis.	Chen L, Wang C, Su J.	Microorganisms	10.3390/microorganisms11102401	2023
	The VanS sensor histidine kinase from type-B vancomycin-resistant enterococci recognizes vancomycin directly.	Maciunas LJ, Rotsides P, D'Lauro EJ, Brady S, Beld J, Loll PJ.	J Biol Chem	10.1016/j.jbc.2025.110276	2025
	Environmental Dependence of Competitive Fitness in Rifampin-Resistant rpoB Mutants of Bacillus subtilis.	Leehan JD, Nicholson WL.	Appl Environ Microbiol	10.1128/aem.02422-21	2022
	Pressure and Temperature Combined With Microbial Supernatant Effectively Inactivate Bacillus subtilis Spores.	Li J, Sun Y, Chen F, Hu X, Dong L.	Front Microbiol	10.3389/fmicb.2021.642501	2021
	Biological and Cosmetical Importance of Fermented Raw Materials: An Overview.	Majchrzak W, Motyl I, Smigielski K.	Molecules	10.3390/molecules27154845	2022
Pathogenicity	Development and In Vivo Characterization of Probiotic Lysate-Treated Chitosan Nanogel as a Novel Biocompatible Formulation for Wound Healing.	Ashoori Y, Mohkam M, Heidari R, Abootalebi SN, Mousavi SM, Hashemi SA, Golkar N, Gholami A.	Biomed Res Int	10.1155/2020/8868618	2020
	In Vivo Efficacy of Bacillus velezensis Isolated from Korean Gochang Bokbunja Vinegar against Carbapenem-Resistant Klebsiella pneumoniae Infections.	Ghorbanian F, Seo H, Tajdozian H, Lee Y, Rahim MA, Kim S, Jung IY, Lee S, Song HY.	Pol J Microbiol	10.33073/pjm-2022-051	2022
	Response of Growth Performance, Blood Biochemistry Indices, and Rumen Bacterial Diversity in Lambs to Diets Containing Supplemental Probiotics and Chinese Medicine Polysaccharides.	Chen H, Guo B, Yang M, Luo J, Hu Y, Qu M, Song X.	Front Vet Sci	10.3389/fvets.2021.681389	2021
Genetics	A temperature-induced metabolic shift in the emerging human pathogen Photorhabdus asymbiotica.	Carter EL, Waterfield NR, Constantinidou C, Alam MT.	mSystems	10.1128/msystems.00970-23	2024
Metabolism	Metabolic engineering of Bacillus subtilis for production of D-lactic acid.	Awasthi D, Wang L, Rhee MS, Wang Q, Chauliac D, Ingram LO, Shanmugam KT.	Biotechnol Bioeng	10.1002/bit.26472	2018
	Study on the preparation process of quinoa anti-hypertensive peptide and its stability.	Fan X, Ma X, Maimaitiyiming R, Aihaiti A, Yang J, Li X, Wang X, Pang G, Liu X, Qiu C, Abra R, Wang L.	Front Nutr	10.3389/fnut.2022.1119042	2022
	Bottom-up synthetic biology approach for improving the efficiency of menaquinone-7 synthesis in Bacillus subtilis.	Ding X, Zheng Z, Zhao G, Wang L, Wang H, Yang Q, Zhang M, Li L, Wang P.	Microb Cell Fact	10.1186/s12934-022-01823-3	2022
	Integrating Metabolomics and Genomics to Uncover Antimicrobial Compounds in Lactiplantibacillus plantarum UTNGt2, a Cacao-Originating Probiotic from Ecuador.	Molina D, Angamarca E, Marinescu GC, Popescu RG, Tenea GN.	Antibiotics (Basel)	10.3390/antibiotics14020123	2025
Enzymology	Molecular and Enzymatic Features of Homoserine Dehydrogenase from Bacillus subtilis.	Kim DH, Nguyen QT, Ko GS, Yang JK.	J Microbiol Biotechnol	10.4014/jmb.2004.04060	2020
	Transcriptome-Wide Effects of NusA on RNA Polymerase Pausing in Bacillus subtilis.	Jayasinghe OT, Mandell ZF, Yakhnin AV, Kashlev M, Babitzke P.	J Bacteriol	10.1128/jb.00534-21	2022
Phylogeny	Live Bacillus subtilis natto Promotes Rumen Fermentation by Modulating Rumen Microbiota In Vitro.	Chang M, Ma F, Wei J, Liu J, Nan X, Sun P.	Animals (Basel)	10.3390/ani11061519	2021
Enzymology	Co-production of Fructooligosaccharides and Levan by Levansucrase from Bacillus subtilis natto with Potential Application in the Food Industry.	Bersaneti GT, Pan NC, Baldo C, Celligoi MAPC.	Appl Biochem Biotechnol	10.1007/s12010-017-2587-0	2018
	Bacillus subtilis natto Derivatives Inhibit Enterococcal Biofilm Formation via Restructuring of the Cell Envelope.	Lin YC, Wu CY, Huang HT, Lu MK, Hu WS, Lee KT.	Front Microbiol	10.3389/fmicb.2021.785351	2021
	Source and succession of microbial communities and tetramethylpyrazine during the brewing process of compound-flavor Baijiu.	Cheng W, Lan W, Chen X, Xue X, Liang H, Zeng H, Li R, Pan T, Li N, Yang H.	Front Microbiol	10.3389/fmicb.2024.1450997	2024
	Biopolymer-Levan Characterization in Bacillus Species Isolated from Traditionally Fermented Soybeans (Thua Nao).	Wannasutta R, Laopeng S, Yuensuk S, McCloskey S, Riddech N, Mongkolthanaruk W.	ACS Omega	10.1021/acsomega.4c09641	2025
	Methanol-Free Protein Expression in Komagataella phaffii With Magnetic or Non-Magnetic Heating.	Dagci I, Arslan SY, Solak K, Acar M, Unver Y, Mavi A.	Microb Biotechnol	10.1111/1751-7915.70183	2025
Biotechnology	Recent Applications and Prospects of Enzymes in Quality and Safety Control of Fermented Foods.	Dai Y, Chen Y, Lin X, Zhang S.	Foods	10.3390/foods13233804	2024
Metabolism	Study on the mechanism of production of gamma-PGA and nattokinase in Bacillus subtilis natto based on RNA-seq analysis.	Li M, Zhang Z, Li S, Tian Z, Ma X.	Microb Cell Fact	10.1186/s12934-021-01570-x	2021
Metabolism	Effect of Bacillus natto solid-state fermentation on the functional constituents and properties of Ginkgo seeds.	Guo N, Jiang YW, Song XR, Li YY, Liu ZM, Fu YJ.	J Food Biochem	10.1111/jfbc.12820	2019
	Inactivation of Bacillus subtilis by Curcumin-Mediated Photodynamic Technology through Inducing Oxidative Stress Response.	Dong L, Qin J, Tai L, Mou K, Liao X, Chen F, Hu X.	Microorganisms	10.3390/microorganisms10040802	2022
Biotechnology	Bacillus subtilis, a Swiss Army Knife in Science and Biotechnology.	Stulke J, Gruppen A, Bramkamp M, Pelzer S.	J Bacteriol	10.1128/jb.00102-23	2023
	The influence of probiotic administration on the phagocytic and oxidative burst activity of neutrophils and monocytes in the peripheral blood of dairy cows during different lactation periods.	Brodzki P, Gorzkos H, Marczuk J, Lisiecka U, Junkuszew A, Krakowski L, Szczubial M, Brodzki N, Glodkowska K.	J Vet Res	10.2478/jvetres-2024-0043	2024
	Strain and plastic composite support (PCS) selection for vitamin K (Menaquinone-7) production in biofilm reactors.	Mahdinia E, Demirci A, Berenjian A.	Bioprocess Biosyst Eng	10.1007/s00449-017-1807-x	2017
Genetics	In Silico Safety Assessment of Bacillus Isolated from Polish Bee Pollen and Bee Bread as Novel Probiotic Candidates.	Bin Hafeez A, Pelka K, Worobo R, Szweda P.	Int J Mol Sci	10.3390/ijms25010666	2024
Metabolism	Influence of B. subtilis 3NA mutations in spo0A and abrB on surfactin production in B. subtilis 168.	Klausmann P, Lilge L, Aschern M, Hennemann K, Henkel M, Hausmann R, Morabbi Heravi K.	Microb Cell Fact	10.1186/s12934-021-01679-z	2021
	Effect of Fermentation on the Nutritional Quality of the Selected Vegetables and Legumes and Their Health Effects.	Knez E, Kadac-Czapska K, Grembecka M.	Life (Basel)	10.3390/life13030655	2023
Metabolism	Engineering Bacillus subtilis ATCC 6051a for the production of recombinant catalases.	Ji M, Liu Y, Wu H, Li S, Duan H, Shi J, Sun J.	J Ind Microbiol Biotechnol	10.1093/jimb/kuab024	2021
	Surface Display of Peptides Corresponding to the Heptad Repeat 2 Domain of the Feline Enteric Coronavirus Spike Protein on Bacillus subtilis Spores Elicits Protective Immune Responses Against Homologous Infection in a Feline Aminopeptidase-N-Transduced Mouse Model.	Chen C, Li YL, Lv FL, Xu LD, Huang YW.	Front Immunol	10.3389/fimmu.2022.925922	2022
Metabolism	First Biochemical Characterization of a Methylcitric Acid Cycle from Bacillus subtilis Strain 168.	Reddick JJ, Sirkisoon S, Dahal RA, Hardesty G, Hage NE, Booth WT, Quattlebaum AL, Mills SN, Meadows VG, Adams SLH, Doyle JS, Kiel BE.	Biochemistry	10.1021/acs.biochem.7b00778	2017
	Development of Poly(lactic acid)-Based Biocomposites with Silver Nanoparticles and Investigation of Their Characteristics.	Aleksanyan KV, Smykovskaya RS, Samoilova NA, Novikov VA, Shakhov AM, Aybush AV, Kuznetsova OP, Lomakin SM, Ryzhmanova YV.	Polymers (Basel)	10.3390/polym16192758	2024
Metabolism	Synthetic antimicrobial peptides delocalize membrane bound proteins thereby inducing a cell envelope stress response.	Omardien S, Drijfhout JW, van Veen H, Schachtschabel S, Riool M, Hamoen LW, Brul S, Zaat SAJ.	Biochim Biophys Acta Biomembr	10.1016/j.bbamem.2018.06.005	2018
	Ruthenium(II) Polypyridyl Complexes and Metronidazole Derivatives: A Powerful Combination in the Design of Photoresponsive Antibacterial Agents Effective under Hypoxic Conditions.	Giacomazzo GE, Conti L, Fagorzi C, Pagliai M, Andreini C, Guerri A, Perito B, Mengoni A, Valtancoli B, Giorgi C.	Inorg Chem	10.1021/acs.inorgchem.3c00214	2023
	Fruit quality retention and shelf-life extension of papaya through organic coating.	Jahan S, Gomasta J, Hassan J, Rahman MH, Kader MA, Kayesh E.	Heliyon	10.1016/j.heliyon.2024.e41293	2025
	Structural and functional characterization of MrpR, the master repressor of the Bacillus subtilis prophage SPbeta.	Kohm K, Jalomo-Khayrova E, Kruger A, Basu S, Steinchen W, Bange G, Frunzke J, Hertel R, Commichau FM, Czech L.	Nucleic Acids Res	10.1093/nar/gkad675	2023
	Moderate High-Pressure Superdormancy in Bacillus Spores: Properties of Superdormant Spores and Proteins Potentially Influencing Moderate High-Pressure Germination.	Delbruck AI, Tritten Y, Nanni P, Heydenreich R, Mathys A.	Appl Environ Microbiol	10.1128/aem.02406-21	2022
	Molecular architecture of the assembly of Bacillus spore coat protein GerQ revealed by cryo-EM.	Cheng Y, Kreutzberger MAB, Han J, Egelman EH, Cao Q.	Nat Commun	10.1038/s41467-024-52422-2	2024
	Computational-approach understanding the structure-function prophecy of Fibrinolytic Protease RFEA1 from Bacillus cereus RSA1.	Sharma C, Nigam A, Singh R.	PeerJ	10.7717/peerj.11570	2021
Genetics	Enrichment of gut microbiome strains for cultivation-free genome sequencing using droplet microfluidics.	Pryszlak A, Wenzel T, Seitz KW, Hildebrand F, Kartal E, Cosenza MR, Benes V, Bork P, Merten CA.	Cell Rep Methods	10.1016/j.crmeth.2021.100137	2022
Biotechnology	Characterization of a Nattokinase from the Newly Isolated Bile Salt-Resistant Bacillus mojavensis LY-06.	Li Y, Tang X, Chen L, Xu X, Li J.	Foods	10.3390/foods11162403	2022
	A Systematic Comparative Study on the Physicochemical Properties, Volatile Compounds, and Biological Activity of Typical Fermented Soy Foods.	Guo Q, Peng J, He Y.	Foods	10.3390/foods13030415	2024
	Characterization of S-glycosylated glycocins containing three disulfides.	Martini RM, Padhi C, van der Donk WA.	J Ind Microbiol Biotechnol	10.1093/jimb/kuaf028	2024
Metabolism	Correlation between the key aroma compounds and gDNA copies of Bacillus during fermentation and maturation of natto.	Liu Y, Song H, Luo H.	Food Res Int	10.1016/j.foodres.2018.06.033	2018
Genetics	Whole Genome Sequencing and Root Colonization Studies Reveal Novel Insights in the Biocontrol Potential and Growth Promotion by Bacillus subtilis MBI 600 on Cucumber.	Samaras A, Nikolaidis M, Antequera-Gomez ML, Camara-Almiron J, Romero D, Moschakis T, Amoutzias GD, Karaoglanidis GS.	Front Microbiol	10.3389/fmicb.2020.600393	2020
	Unique Structural Fold of LonBA Protease from Bacillus subtilis, a Member of a Newly Identified Subfamily of Lon Proteases.	Gustchina A, Li M, Andrianova AG, Kudzhaev AM, Lountos GT, Sekula B, Cherry S, Tropea JE, Smirnov IV, Wlodawer A, Rotanova TV.	Int J Mol Sci	10.3390/ijms231911425	2022
Metabolism	Metabolic engineering design to enhance (R,R)-2,3-butanediol production from glycerol in Bacillus subtilis based on flux balance analysis.	Vikromvarasiri N, Shirai T, Kondo A.	Microb Cell Fact	10.1186/s12934-021-01688-y	2021
Genetics	Horizontal transfer and evolution of wall teichoic acid gene cassettes in Bacillus subtilis.	Sutton G, Fogel GB, Abramson B, Brinkac L, Michael T, Liu ES, Thomas S.	F1000Res	10.12688/f1000research.51874.1	2021
	CRISPRi screen for enhancing heterologous alpha-amylase yield in Bacillus subtilis.	Geissler AS, Fehler AO, Poulsen LD, Gonzalez-Tortuero E, Kallehauge TB, Alkan F, Anthon C, Seemann SE, Rasmussen MD, Breuner A, Hjort C, Vinther J, Gorodkin J.	J Ind Microbiol Biotechnol	10.1093/jimb/kuac028	2023
Metabolism	Biocontrol of the internalization of Salmonella enterica and Enterohaemorrhagic Escherichia coli in mung bean sprouts with an endophytic Bacillus subtilis.	Shen Z, Mustapha A, Lin M, Zheng G.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2017.03.016	2017
Genetics	Comparative genomics reveals insights into the potential of Lysinibacillus irui as a plant growth promoter.	Hilario S, Goncalves MFM, Matos I, Rangel LF, Sousa JA, Santos MJ, Ayra-Pardo C.	Appl Microbiol Biotechnol	10.1007/s00253-024-13210-6	2024
	Potential influence of antimicrobial resistance gene content in probiotic bacteria on the gut resistome ecosystems.	Radovanovic M, Kekic D, Gajic I, Kabic J, Jovicevic M, Kekic N, Opavski N, Ranin L.	Front Nutr	10.3389/fnut.2023.1054555	2023
	Bacteriostatic effects of high-intensity ultrasonic treatment on Bacillus subtilis vegetative cells.	Luo W, Wang J, Wang Y, Tang J, Ren Y, Geng F.	Ultrason Sonochem	10.1016/j.ultsonch.2021.105862	2021
	Characterization and discrimination of volatile organic compounds and alpha-glucosidase inhibitory activity of soybeans (Glycine max L.) during solid-state fermentation with Eurotium cristatum YL-1.	Xiao Y, Chen H, Wang Y, Ma J, Hou A, Wang Y, Chen Y, Lu X.	Curr Res Food Sci	10.1016/j.crfs.2024.100854	2024
	Bacterial Homologs of Progestin and AdipoQ Receptors (PAQRs) Affect Membrane Energetics Homeostasis but Not Fluidity.	Melchionna MV, Gullett JM, Bouveret E, Shrestha HK, Abraham PE, Hettich RL, Alexandre G.	J Bacteriol	10.1128/jb.00583-21	2022
Biotechnology	Microbial Poly-gamma-Glutamic Acid (gamma-PGA) as an Effective Tooth Enamel Protectant.	Parati M, Clarke L, Anderson P, Hill R, Khalil I, Tchuenbou-Magaia F, Stanley MS, McGee D, Mendrek B, Kowalczuk M, Radecka I.	Polymers (Basel)	10.3390/polym14142937	2022
	In Vitro synergy of Farnesyltransferase inhibitors in combination with colistin against ESKAPE bacteria.	Klose M, Weber L, Bachmann HS.	PLoS One	10.1371/journal.pone.0331440	2025
	Consortium of selected yeasts to produce healthy soy fermented beverage: Evaluation of microbial evolution, analytical, sensorial, and functional features.	Agarbati A, Ciani M, Canonico L, Comitini F.	Heliyon	10.1016/j.heliyon.2023.e20979	2023
Metabolism	Direct high-pressure NMR observation of dipicolinic acid leaking from bacterial spore: A crucial step for thermal inactivation.	Akasaka K, Maeno A, Yamazaki A.	Biophys Chem	10.1016/j.bpc.2017.04.008	2017
Biotechnology	Genetic tools for the electrotroph Sporomusa ovata and autotrophic biosynthesis.	Tremblay P-L, Zhang T.	Appl Environ Microbiol	10.1128/aem.01757-23	2024
	The Effect of Probiotics Use on Salivary Cariogenic Bacteria in Orthodontic Patients with Various Caries Risk Status.	Chen LR, Lai CL, Chen JP, Kao CT.	Nutrients	10.3390/nu14153196	2022
Metabolism	Bacterial inducible expression of plant cell wall-binding protein YesO through conflict between Glycine max and saprophytic Bacillus subtilis.	Sugiura H, Nagase A, Oiki S, Mikami B, Watanabe D, Hashimoto W.	Sci Rep	10.1038/s41598-020-75359-0	2020
	Dietary supplementation of Bacillus subtilis PB6 improves sow reproductive performance and reduces piglet birth intervals.	Zhang Q, Li J, Cao M, Li Y, Zhuo Y, Fang Z, Che L, Xu S, Feng B, Lin Y, Jiang X, Zhao X, Wu.	Anim Nutr	10.1016/j.aninu.2020.04.002	2020
Metabolism	Combinatorial Methylerythritol Phosphate Pathway Engineering and Process Optimization for Increased Menaquinone-7 Synthesis in Bacillus subtilis.	Chen T, Xia H, Cui S, Lv X, Li X, Liu Y, Li J, Du G, Liu L.	J Microbiol Biotechnol	10.4014/jmb.1912.12008	2020
	Data Recorded in Real Life Support the Safety of Nattokinase in Patients with Vascular Diseases.	Gallelli G, Di Mizio G, Palleria C, Siniscalchi A, Rubino P, Muraca L, Cione E, Salerno M, De Sarro G, Gallelli L.	Nutrients	10.3390/nu13062031	2021
Biotechnology	Studies on solvent precipitation of levan synthesized using Bacillus subtilis MTCC 441.	Chidambaram JSCA, Veerapandian B, Sarwareddy KK, Mani KP, Shanmugam SR, Venkatachalam P.	Heliyon	10.1016/j.heliyon.2019.e02414	2019
Metabolism	Heterologous production of active form of beta-lytic protease by Bacillus subtilis and improvement of staphylolytic activity by protein engineering.	Hioki T, Yamashita D, Tohata M, Endo K, Kawahara A, Okuda M.	Microb Cell Fact	10.1186/s12934-021-01724-x	2021
Metabolism	Inactivation by Pulsed Light of Bacillus subtilis Spores with Impaired Protection Factors.	Esbelin J, Mallea S, Clair G, Carlin F.	Photochem Photobiol	10.1111/php.12568	2016
Metabolism	Intracellular response of Bacillus natto in response to different oxygen supply and its influence on menaquinone-7 biosynthesis.	Ma XC, Zhu SY, Luo MM, Hu XC, Peng C, Huang H, Ren LJ.	Bioprocess Biosyst Eng	10.1007/s00449-019-02085-x	2019
Metabolism	Effects of Bacillus subtilis natto and Different Components in Culture on Rumen Fermentation and Rumen Functional Bacteria In Vitro.	Sun P, Li J, Bu D, Nan X, Du H.	Curr Microbiol	10.1007/s00284-016-0986-z	2016
	Bacillus subtilis and Enterococcus faecium co-fermented feed regulates lactating sow's performance, immune status and gut microbiota.	Wang C, Wei S, Xu B, Hao L, Su W, Jin M, Wang Y.	Microb Biotechnol	10.1111/1751-7915.13672	2021
	Structural basis of transcription activation by the global regulator Spx.	Shi J, Li F, Wen A, Yu L, Wang L, Wang F, Jin Y, Jin S, Feng Y, Lin W.	Nucleic Acids Res	10.1093/nar/gkab790	2021
	Patterns of the Nutrients and Metabolites in Apostichopus japonicus Fermented by Bacillus natto and Their Ability to Alleviate Acute Alcohol Intoxication.	Gu X, Zhao R, Li H, Dong X, Meng M, Li T, Zhao Q, Li Y.	Foods	10.3390/foods13020262	2024
	Formulation and Functional Characterization of a Cannabidiol-Loaded Nanoemulsion in Canine Mammary Carcinoma Cells	Medina F, Velasco G, Villamizar-Sarmiento M, Torres C, Oyarzun-Ampuero F.	Pharmaceutics		2025
	RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity.	Morici M, Gabrielli S, Fujiwara K, Paternoga H, Beckert B, Bock LV, Chiba S, Wilson DN.	Nat Commun	10.1038/s41467-024-46761-3	2024
	The impact of PrsA over-expression on the Bacillus subtilis transcriptome during fed-batch fermentation of alpha-amylase production.	Geissler AS, Poulsen LD, Doncheva NT, Anthon C, Seemann SE, Gonzalez-Tortuero E, Breuner A, Jensen LJ, Hjort C, Vinther J, Gorodkin J.	Front Microbiol	10.3389/fmicb.2022.909493	2022
	Heat Activation and Inactivation of Bacterial Spores: Is There an Overlap?	Wen J, Smelt JPPM, Vischer NOE, de Vos AL, Setlow P, Brul S.	Appl Environ Microbiol	10.1128/aem.02324-21	2022
	The influence of probiotic administration on selected leukocyte subpopulations and the serum amyloid A concentration in the peripheral blood of dairy cows during different lactation periods.	Brodzki P, Marczuk J, Gorzkos H, Lisiecka U, Szczubial M, Brodzki A, Dabrowski R, Krakowski L, Glodkowska K, Brodzki N.	J Vet Res	10.2478/jvetres-2024-0057	2024
	Antibacterial Activity of Metergoline Analogues: Revisiting the Ergot Alkaloid Scaffold for Antibiotic Discovery.	Johnson JW, Ellis MJ, Piquette ZA, MacNair C, Carfrae L, Bhando T, Ritchie NE, Saliba P, Brown ED, Magolan J.	ACS Med Chem Lett	10.1021/acsmedchemlett.1c00648	2022
	Biochemical Characterization of Cellulase From Bacillus subtilis Strain and its Effect on Digestibility and Structural Modifications of Lignocellulose Rich Biomass.	Malik WA, Javed S.	Front Bioeng Biotechnol	10.3389/fbioe.2021.800265	2021
Genetics	Diagnosis and mitigation of the systemic impact of genome reduction in Escherichia coli DGF-298.	Champie A, Lachance J-C, Sastry A, Matteau D, Lloyd CJ, Grenier F, Lamoureux CR, Jeanneau S, Feist AM, Jacques P-E, Palsson BO, Rodrigue S.	mBio	10.1128/mbio.00873-24	2024
	Problem-Solving Exercise for Undergraduate Students Involving the Japanese Fermented Food Natto.	Yoshiyama Y, Shima J, Fushiki T.	J Microbiol Biol Educ	10.1128/jmbe.v20i1.1614	2019
	Effects of Bacillus megatherium 1259 on Growth Performance, Nutrient Digestibility, Rumen Fermentation, and Blood Biochemical Parameters in Holstein Bull Calves.	Deng B, Chen Y, Gong X, Dai Y, Zhan K, Lin M, Wang L, Zhao G.	Animals (Basel)	10.3390/ani11082379	2021
	Chitooligosaccharide enhanced the efficacy of Bacillus amyloliquefaciens CAS02 for the control of tobacco black shank.	Zeng X, Zhang X, Peng B, Xie B, Yuan Y, Yao H, You X, Wei J, Li Y.	Front Microbiol	10.3389/fmicb.2023.1296916	2023
Proteome	A Methanolic Urea-Enhanced Protein Extraction Enabling the Largest Bacterial Phosphorylation Resource.	Wu PS, Chen TA, Chen BY, Ishihama Y, Lin MH.	Mol Cell Proteomics	10.1016/j.mcpro.2025.101019	2025
	Structure-function studies reveal ComEA contains an oligomerization domain essential for transformation in gram-positive bacteria.	Ahmed I, Hahn J, Henrickson A, Khaja FT, Demeler B, Dubnau D, Neiditch MB.	Nat Commun	10.1038/s41467-022-35129-0	2022
Metabolism	Magnetic immobilization of Bacillus subtilis natto cells for menaquinone-7 fermentation.	Ebrahiminezhad A, Varma V, Yang S, Berenjian A.	Appl Microbiol Biotechnol	10.1007/s00253-015-6977-3	2016
Enzymology	Heterologous Gene Regulation in Clostridia: Rationally Designed Gene Regulation for Industrial and Medical Applications.	Zhang Y, Bailey TS, Kubiak AM, Lambin P, Theys J.	ACS Synth Biol	10.1021/acssynbio.2c00401	2022
	Two cases of type 2 diabetes mellitus successfully treated with probiotics.	Cardinali N, Bauman C, Rodriguez Ayala F, Grau R.	Clin Case Rep	10.1002/ccr3.3354	2020
	Conjugation Operons in Gram-Positive Bacteria with and without Antitermination Systems.	Miguel-Arribas A, Wu LJ, Michaelis C, Yoshida KI, Grohmann E, Meijer WJJ.	Microorganisms	10.3390/microorganisms10030587	2022
Metabolism	A membrane transporter required for 3-hydroxybutyrate uptake during the early sporulation stage in Bacillus subtilis.	Shen YC, Shaw GC.	FEMS Microbiol Lett	10.1093/femsle/fnv165	2015
Metabolism	Evaluation of various methods of selection of B. subtilis strains capable of secreting surface-active compounds.	Koim-Puchowska B, Klosowski G, Mikulski D, Menka A.	PLoS One	10.1371/journal.pone.0225108	2019
	Extraordinary long-stem confers resistance of intrinsic terminators to processive antitermination.	Miguel-Arribas A, Martin-Maria A, Alaerds ECW, Val-Calvo J, Yuste L, Rojo F, Abia D, Wu LJ, Meijer WJJ.	Nucleic Acids Res	10.1093/nar/gkad333	2023
	The Recent Trend in the Use of Multistrain Probiotics in Livestock Production: An Overview.	Lambo MT, Chang X, Liu D.	Animals (Basel)	10.3390/ani11102805	2021
	Growth and sporulation defects in Bacillus subtilis mutants with a single rrn operon can be suppressed by amplification of the rrn operon.	Yano K, Masuda K, Akanuma G, Wada T, Matsumoto T, Shiwa Y, Ishige T, Yoshikawa H, Niki H, Inaoka T, Kawamura F.	Microbiology (Reading)	10.1099/mic.0.000207	2016
	Changes in Functionality of Germinated and Non-Germinated Brown Rice Fermented by Bacillus natto.	Wang HJ, Chang L, Lin YS.	Foods	10.3390/foods10112779	2021
	Quorum Quenching Activity of the PGPR Bacillus subtilis UD1022 Alters Nodulation Efficiency of Sinorhizobium meliloti on Medicago truncatula.	Rosier A, Beauregard PB, Bais HP.	Front Microbiol	10.3389/fmicb.2020.596299	2020
Genetics	Perception of Biocontrol Potential of Bacillus inaquosorum KR2-7 against Tomato Fusarium Wilt through Merging Genome Mining with Chemical Analysis.	Kamali M, Guo D, Naeimi S, Ahmadi J.	Biology (Basel)	10.3390/biology11010137	2022
	Germination-Arrest Bacillus subtilis Spores as An Oral Delivery Vehicle of Grass Carp Reovirus (GCRV) Vp7 Antigen Augment Protective Immunity in Grass Carp (Ctenopharyngodon idella).	Sun R, Zhang M, Chen H, Wei Y, Ning D.	Genes (Basel)	10.3390/genes11111351	2020
	Fluorometric Liposome Screen for Inhibitors of a Physiologically Important Bacterial Ion Channel.	Fernandes AS, Pombinho A, Teixeira-Duarte CM, Morais-Cabral JH, Harley CA.	Front Microbiol	10.3389/fmicb.2021.603700	2021
	De novo designed protein guiding targeted protein degradation.	Li Z, Qiao G, Wang X, Wang M, Cheng J, Hu G, Li X, Wu J, Liu J, Gao C, Liu L.	Nat Commun	10.1038/s41467-025-62050-z	2025
Metabolism	Oxalate-Degrading Bacillus subtilis Mitigates Urolithiasis in a Drosophila melanogaster Model.	Al KF, Daisley BA, Chanyi RM, Bjazevic J, Razvi H, Reid G, Burton JP.	mSphere	10.1128/msphere.00498-20	2020
	Association between gut microbiota and locomotive syndrome risk in healthy Japanese adults: a cross-sectional study.	Nishiyama M, Nakamura S, Matsuki T, Narimatsu H.	NPJ Aging	10.1038/s41514-024-00184-y	2024
Metabolism	Positioning Bacillus subtilis as terpenoid cell factory.	Pramastya H, Song Y, Elfahmi EY, Sukrasno S, Quax WJ.	J Appl Microbiol	10.1111/jam.14904	2021
Metabolism	Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins.	Zhang P, Zhao X, Wang Y, Du K, Wang Z, Yu J, Chang G, Matthews S, Wang H, Liu B.	Proc Natl Acad Sci U S A	10.1073/pnas.2116278119	2022
	pheS ^* , an effective host-genotype-independent counter-selectable marker for marker-free chromosome deletion in Bacillus amyloliquefaciens.	Zhou C, Shi L, Ye B, Feng H, Zhang J, Zhang R, Yan X.	Appl Microbiol Biotechnol	10.1007/s00253-016-7906-9	2017
Pathogenicity	Association with a novel protective microbe facilitates host adaptation to a stressful environment.	Hoang KL, Gerardo NM, Morran LT.	Evol Lett	10.1002/evl3.223	2021
Genetics	Genomic analysis of acid tolerance genes and deciphering the function of ydaG gene in mitigating acid tolerance in Priestia megaterium.	Sharma D, Chetri PB, Ranga V, Sen S, Sarmah BK, Barooah M.	Front Microbiol	10.3389/fmicb.2024.1414777	2024
	Structural basis for recognition and methylation of p97 by METTL21D, a valosin-containing protein lysine methyltransferase.	Nguyen TQ, Koh S, Kwon J, Jang S, Kang W, Yang JK.	iScience	10.1016/j.isci.2023.107222	2023
Pathogenicity	Coevolution's conflicting role in the establishment of beneficial associations.	Hoang KL, Choi H, Gerardo NM, Morran LT.	Evolution	10.1111/evo.14472	2022
	Observation of Cytotoxicity of Phosphonium Derivatives Is Explained: Metabolism Inhibition and Adhesion Alteration.	Nazarov PA, Khrulnova SA, Kessenikh AG, Novoyatlova US, Kuznetsova SB, Bazhenov SV, Sorochkina AI, Karakozova MV, Manukhov IV.	Antibiotics (Basel)	10.3390/antibiotics12040720	2023
	Targeted and high-throughput gene knockdown in diverse bacteria using synthetic sRNAs.	Cho JS, Yang D, Prabowo CPS, Ghiffary MR, Han T, Choi KR, Moon CW, Zhou H, Ryu JY, Kim HU, Lee SY.	Nat Commun	10.1038/s41467-023-38119-y	2023
Metabolism	Two Ways To Convert a Low-Affinity Potassium Channel to High Affinity: Control of Bacillus subtilis KtrCD by Glutamate.	Kruger L, Herzberg C, Warneke R, Poehlein A, Stautz J, Weiss M, Daniel R, Hanelt I, Stulke J.	J Bacteriol	10.1128/jb.00138-20	2020
Metabolism	RNA-Seq reveals transcriptomic interactions of Bacillus subtilis natto and Bifidobacterium animalis subsp. lactis in whole soybean solid-state co-fermentation.	Wang HK, Ng YK, Koh E, Yao L, Chien AS, Lin HX, Lee YK.	Food Microbiol	10.1016/j.fm.2015.04.012	2015
	Exploring the Potential for Fungal Antagonism and Cell Wall Attack by Bacillus subtilis natto.	Schonbichler A, Diaz-Moreno SM, Srivastava V, McKee LS.	Front Microbiol	10.3389/fmicb.2020.00521	2020
Metabolism	The bacterial multidrug resistance regulator BmrR distorts promoter DNA to activate transcription.	Fang C, Li L, Zhao Y, Wu X, Philips SJ, You L, Zhong M, Shi X, O'Halloran TV, Li Q, Zhang Y.	Nat Commun	10.1038/s41467-020-20134-y	2020
	Repurposing CRISPR RNA-guided integrases system for one-step, efficient genomic integration of ultra-long DNA sequences.	Cheng ZH, Wu J, Liu JQ, Min D, Liu DF, Li WW, Yu HQ.	Nucleic Acids Res	10.1093/nar/gkac554	2022
Proteome	The Association of Biomolecular Resource Facilities Proteome Informatics Research Group Study on Metaproteomics (iPRG-2020).	Jagtap PD, Hoopmann MR, Neely BA, Harvey A, Kall L, Perez-Riverol Y, Abajorga MK, Thomas JA, Weintraub ST, Palmblad M.	J Biomol Tech	10.7171/3fc1f5fe.a058bad4	2023
	Secondary metabolites of Bacillus subtilis impact the assembly of soil-derived semisynthetic bacterial communities.	Kiesewalter HT, Lozano-Andrade CN, Strube ML, Kovacs AT.	Beilstein J Org Chem	10.3762/bjoc.16.248	2020
Metabolism	Evolution of Ribosomal Protein S14 Demonstrated by the Reconstruction of Chimeric Ribosomes in Bacillus subtilis.	Akanuma G, Kawamura F, Watanabe S, Watanabe M, Okawa F, Natori Y, Nanamiya H, Asai K, Chibazakura T, Yoshikawa H, Soma A, Hishida T, Kato-Yamada Y.	J Bacteriol	10.1128/jb.00599-20	2021
	Structural, Physicochemical, and Functional Properties of Wheat Bran Insoluble Dietary Fiber Modified With Probiotic Fermentation.	Liao AM, Zhang J, Yang ZL, Huang JH, Pan L, Hou YC, Li XX, Zhao PH, Dong YQ, Hu ZY, Hui M.	Front Nutr	10.3389/fnut.2022.803440	2022
	Synthesis of Poly-gamma-Glutamic Acid and Its Application in Biomedical Materials.	Cai M, Han Y, Zheng X, Xue B, Zhang X, Mahmut Z, Wang Y, Dong B, Zhang C, Gao D, Sun J.	Materials (Basel)	10.3390/ma17010015	2023
	B. subtilis MutS2 splits stalled ribosomes into subunits without mRNA cleavage.	Park EN, Mackens-Kiani T, Berhane R, Esser H, Erdenebat C, Burroughs AM, Berninghausen O, Aravind L, Beckmann R, Green R, Buskirk AR.	EMBO J	10.1038/s44318-023-00010-3	2024
	Metabolic Profiling-Based Evaluation of the Fermentative Behavior of Aspergillus oryzae and Bacillus subtilis for Soybean Residues Treated at Different Temperatures.	Hyeon H, Min CW, Moon K, Cha J, Gupta R, Park SU, Kim ST, Kim JK.	Foods	10.3390/foods9020117	2020
	Complete Genome Sequence of Bacillus subtilis Strain CU1050, Which Is Sensitive to Phage SPbeta.	Johnson CM, Grossman AD.	Genome Announc	10.1128/genomea.00262-16	2016
	A unique self-truncation of bacterial GH5 endoglucanases leads to enhanced activity and thermostability.	Wu MH, Kao MR, Li CW, Yu SM, Ho TD.	BMC Biol	10.1186/s12915-022-01334-y	2022
Pathogenicity	Immunomodulation and Generation of Tolerogenic Dendritic Cells by Probiotic Bacteria in Patients with Inflammatory Bowel Disease.	Ghavami SB, Yadegar A, Aghdaei HA, Sorrentino D, Farmani M, Mir AS, Azimirad M, Balaii H, Shahrokh S, Zali MR.	Int J Mol Sci	10.3390/ijms21176266	2020
Genetics	Genomics Analysis of Bacillus megaterium 1259 as a Probiotic and Its Effects on Performance in Lactating Dairy Cows.	Deng B, Wang L, Ma Q, Yu T, Liu D, Dai Y, Zhao G.	Animals (Basel)	10.3390/ani11020397	2021
	Effect of a Multispecies Probiotic Mixture on the Growth and Incidence of Diarrhea, Immune Function, and Fecal Microbiota of Pre-weaning Dairy Calves.	Wu Y, Wang L, Luo R, Chen H, Nie C, Niu J, Chen C, Xu Y, Li X, Zhang W.	Front Microbiol	10.3389/fmicb.2021.681014	2021
Pathogenicity	Enhancing Menaquinone-7 Production by Bacillus natto R127 Through the Nutritional Factors and Surfactant.	Hu XC, Liu WM, Luo MM, Ren LJ, Ji XJ, Huang H.	Appl Biochem Biotechnol	10.1007/s12010-017-2423-6	2017
Pathogenicity	Bacteriophage Twort protein Gp168 is a beta-clamp inhibitor by occupying the DNA sliding channel.	Liu B, Li S, Liu Y, Chen H, Hu Z, Wang Z, Zhao Y, Zhang L, Ma B, Wang H, Matthews S, Wang Y, Zhang K.	Nucleic Acids Res	10.1093/nar/gkab875	2021
	Physicochemical and sensory characteristics of commercially available rice-based Doenjang and their correlation to consumer acceptability for Korean young adults.	Jo Y, Lee J, Kim MK.	Food Sci Biotechnol	10.1007/s10068-022-01224-7	2023
Metabolism	Iron Homeostasis in Bacillus subtilis Requires Siderophore Production and Biofilm Formation.	Rizzi A, Roy S, Bellenger JP, Beauregard PB.	Appl Environ Microbiol	10.1128/aem.02439-18	2019
Pathogenicity	The effects of Bacillus subtilis on Caenorhabditis elegans fitness after heat stress.	Hoang KL, Gerardo NM, Morran LT.	Ecol Evol	10.1002/ece3.4983	2019
	Cloning, heterologous expression and structural characterization of an alkaline serine protease from sea water haloalkaliphilic bacterium	Raval VH, Rawal CM, Pandey S, Bhatt HB, Dahima BR, Singh SP.	Ann Microbiol	10.1007/s13213-014-0869-0	2015
	Genotoxic Agents Produce Stressor-Specific Spectra of Spectinomycin Resistance Mutations Based on Mechanism of Action and Selection in Bacillus subtilis.	Korry BJ, Lee SYE, Chakrabarti AK, Choi AH, Ganser C, Machan JT, Belenky P.	Antimicrob Agents Chemother	10.1128/aac.00891-21	2021
Metabolism	Fatty acid metabolism and the oxidative stress response support bacterial predation.	Jain R, Le NH, Bertaux L, Baudry J, Bibette J, Denis Y, Habermann BH, Mignot T.	Proc Natl Acad Sci U S A	10.1073/pnas.2420875122	2025
	Bioinformatics Modelling and Metabolic Engineering of the Branched Chain Amino Acid Pathway for Specific Production of Mycosubtilin Isoforms in Bacillus subtilis.	Guez JS, Coucheney F, Guy J, Bechet M, Fontanille P, Chihib NE, Niehren J, Coutte F, Jacques P.	Metabolites	10.3390/metabo12020107	2022
	Engineered endosymbionts that alter mammalian cell surface marker, cytokine and chemokine expression.	Madsen CS, Makela AV, Greeson EM, Hardy JW, Contag CH.	Commun Biol	10.1038/s42003-022-03851-6	2022
Enzymology	Nattokinase: production and application.	Dabbagh F, Negahdaripour M, Berenjian A, Behfar A, Mohammadi F, Zamani M, Irajie C, Ghasemi Y.	Appl Microbiol Biotechnol	10.1007/s00253-014-6135-3	2014
Metabolism	Titration of supplemental Bacillus subtilis subsp. subtilis American Type Culture Collection PTA-125135 to broiler chickens fed diets of 2 different metabolizable energy concentrations.	Krueger LA, Spangler DA, Sims MD.	Poult Sci	10.1016/j.psj.2020.04.027	2020
Enzymology	Thrombolytic Potential of Novel Thiol-Dependent Fibrinolytic Protease from Bacillus cereus RSA1.	Sharma C, Salem GEM, Sharma N, Gautam P, Singh R.	Biomolecules	10.3390/biom10010003	2019
Enzymology	Protein complexes in cells by AI-assisted structural proteomics.	O'Reilly FJ, Graziadei A, Forbrig C, Bremenkamp R, Charles K, Lenz S, Elfmann C, Fischer L, Stulke J, Rappsilber J.	Mol Syst Biol	10.15252/msb.202311544	2023
	Antibiotic Resistance and Probiotics: Knowledge Gaps, Market Overview and Preliminary Screening.	Zavisic G, Popovic M, Stojkov S, Medic D, Gusman V, Jovanovic Ljeskovic N, Jovanovic Galovic A.	Antibiotics (Basel)	10.3390/antibiotics12081281	2023
Metabolism	Effect of probiotics on blood fatty acid metabolism during the late middle stage of fattening period in Japanese Black cattle.	Yoneshige R, Kusuda E, Ando T.	J Vet Med Sci	10.1292/jvms.21-0354	2022
Metabolism	NamZ1 and NamZ2 from the Oral Pathogen Tannerella forsythia Are Peptidoglycan Processing Exo-beta-N-Acetylmuramidases with Distinct Substrate Specificities.	Borisova M, Balbuchta K, Lovering A, Titz A, Mayer C.	J Bacteriol	10.1128/jb.00597-21	2022
	The Gut Microbiota-Related Antihyperglycemic Effect of Metformin.	Szymczak-Pajor I, Drzewoski J, Kozlowska M, Krekora J, Sliwinska A.	Pharmaceuticals (Basel)	10.3390/ph18010055	2025
Metabolism	Improving the Production of Salt-Tolerant Glutaminase by Integrating Multiple Copies of Mglu into the Protease and 16S rDNA Genes of Bacillus subtilis 168.	Zhang X, Xu Z, Liu S, Qian K, Xu M, Yang T, Xu J, Rao Z.	Molecules	10.3390/molecules24030592	2019
	Bacillus subtilis Systems Biology: Applications of -Omics Techniques to the Study of Endospore Formation.	Bate AR, Bonneau R, Eichenberger P.	Microbiol Spectr	10.1128/microbiolspec.tbs-0019-2013	2014
Metabolism	Biocatalytic synthesis of lactosucrose using a recombinant thermostable beta-fructofuranosidase from Arthrobacter sp. 10138.	Chen C, Deng J, Lv X, Li J, Du G, Li H, Liu L.	Bioengineered	10.1080/21655979.2020.1739404	2020
	A potential therapeutic strategy of an innovative probiotic formulation toward topical treatment of diabetic ulcer: an in vivo study.	Karimi F, Montazeri-Najafabady N, Mohammadi F, Azadi A, Koohpeyma F, Gholami A.	Nutr Diabetes	10.1038/s41387-024-00320-3	2024
	RNA-DNA interactomes of three prokaryotes uncovered by proximity ligation.	Gavrilov AA, Evko GS, Galitsyna AA, Ulianov SV, Kochetkova TV, Merkel AY, Tyakht AV, Razin SV.	Commun Biol	10.1038/s42003-023-04853-8	2023
	Biochemical Characterization of Two Rhamnogalacturonan Lyases From Bacteroides ovatus ATCC 8483 With Preference for RG-I Substrates.	Wang W, Wang Y, Yi H, Liu Y, Zhang G, Zhang L, Mayo KH, Yuan Y, Zhou Y.	Front Microbiol	10.3389/fmicb.2021.799875	2021
Metabolism	Analysis of disulphide bond linkage between CoA and protein cysteine thiols during sporulation and in spores of Bacillus species.	Zhyvoloup A, Yu BYK, Bakovic J, Davis-Lunn M, Tossounian MA, Thomas N, Tsuchiya Y, Peak-Chew SY, Wigneshweraraj S, Filonenko V, Skehel M, Setlow P, Gout I.	FEMS Microbiol Lett	10.1093/femsle/fnaa174	2020
	Differential Age-Based Response Induced by a Commercial Probiotic Supplementation in Pastured Goats.	Ndegwa E, Elhadedy DE, Richey C, Kim C, Yousuf AB.	Probiotics Antimicrob Proteins	10.1007/s12602-024-10337-w	2025
	RbgA ensures the correct timing in the maturation of the 50S subunits functional sites.	Seffouh A, Trahan C, Wasi T, Jain N, Basu K, Britton RA, Oeffinger M, Ortega J.	Nucleic Acids Res	10.1093/nar/gkac059	2022
	Algal methylated compounds shorten the lag phase of Phaeobacter inhibens bacteria.	Sperfeld M, Narvaez-Barragan DA, Malitsky S, Frydman V, Yuda L, Rocha J, Segev E.	Nat Microbiol	10.1038/s41564-024-01742-6	2024
Metabolism	Identification of an amphipathic peptide sensor of the Bacillus subtilis fluid membrane microdomains.	Jiang Y, Dai X, Qin M, Guo Z.	Commun Biol	10.1038/s42003-019-0562-8	2019
Proteome	The ins and outs of Bacillus proteases: activities, functions and commercial significance.	Harwood CR, Kikuchi Y.	FEMS Microbiol Rev	10.1093/femsre/fuab046	2022
	Synergistic Degradation of Pyrethroids by the Quorum Sensing-Regulated Carboxylesterase of Bacillus subtilis BSF01.	Xiao Y, Lu Q, Yi X, Zhong G, Liu J.	Front Bioeng Biotechnol	10.3389/fbioe.2020.00889	2020
Metabolism	An Alkylpyrazine Synthesis Mechanism Involving l-Threonine-3-Dehydrogenase Describes the Production of 2,5-Dimethylpyrazine and 2,3,5-Trimethylpyrazine by Bacillus subtilis.	Zhang L, Cao Y, Tong J, Xu Y.	Appl Environ Microbiol	10.1128/aem.01807-19	2019
Metabolism	[Transformation of baicalin and wogonoside through liquid fermentation with Bacillus natto].	Long HN, Zhang S, Yao L, Zhang M, Wang PJ, Meng XX, Gao X, Zhang RP.	Zhongguo Zhong Yao Za Zhi	10.4268/cjcmm20152316	2015
	Antidiarrheal Effect of Fermented Millet Bran on Diarrhea Induced by Senna Leaf in Mice.	Chen S, Hao M, Zhang L.	Foods	10.3390/foods11142082	2022
Metabolism	Burkholderia thailandensis Methylated Hydroxyalkylquinolines: Biosynthesis and Antimicrobial Activity in Cocultures.	Klaus JR, Majerczyk C, Moon S, Eppler NA, Smith S, Tuma E, Groleau MC, Asfahl KL, Smalley NE, Hayden HS, Piochon M, Ball P, Dandekar AA, Gauthier C, Deziel E, Chandler JR.	Appl Environ Microbiol	10.1128/aem.01452-20	2020
	Changes in Chemical Composition of Lentils, Including Gamma-Aminobutyric Acid and Volatile Compound Formation during Submerged and Solid-State Fermentation with Pediococcus acidilactici.	Mockus E, Starkute V, Klupsaite D, Bartkevics V, Borisova A, Sarunaite L, Arlauskiene A, Rocha JM, Bartkiene E.	Foods	10.3390/foods13081249	2024
Enzymology	Purification and side chain selective chemical modifications of glutamate dehydrogenase from Bacillus subtilis natto.	Ni Y, Wang J, Qian B, Song G, Yao X, Zhang JH.	Appl Biochem Biotechnol	10.1007/s12010-014-0788-3	2014
	Network Reconstruction and Modelling Made Reproducible with moped.	Saadat NP, van Aalst M, Ebenhoh O.	Metabolites	10.3390/metabo12040275	2022
	Evaluation of Enterococcal Probiotic Usage and Review of Potential Health Benefits, Safety, and Risk of Antibiotic-Resistant Strain Emergence.	Im EJ, Lee HH, Kim M, Kim MK.	Antibiotics (Basel)	10.3390/antibiotics12081327	2023
Metabolism	Minimalistic mycoplasmas harbor different functional toxin-antitoxin systems.	Hill V, Akarsu H, Barbarroja RS, Cippa VL, Kuhnert P, Heller M, Falquet L, Heller M, Stoffel MH, Labroussaa F, Jores J.	PLoS Genet	10.1371/journal.pgen.1009365	2021
	Cryo-EM resolves the structure of the archaeal dsDNA virus HFTV1 from head to tail.	Zhang DX, Isupov MN, Davies RM, Schwarzer S, McLaren M, Stuart WS, Gold VAM, Oksanen HM, Quax TEF, Daum B.	Sci Adv	10.1126/sciadv.adx1178	2025
	Surface display of OmpC of Salmonella serovar Pullorum on Bacillus subtilis spores.	Dai X, Liu M, Pan K, Yang J.	PLoS One	10.1371/journal.pone.0191627	2018
	Differentiation of Vegetative Cells into Spores: a Kinetic Model Applied to Bacillus subtilis.	Gauvry E, Mathot AG, Couvert O, Leguerinel I, Jules M, Coroller L.	Appl Environ Microbiol	10.1128/aem.00322-19	2019
	Efficacy and Safety of Probiotics Combined With Traditional Chinese Medicine for Ulcerative Colitis: A Systematic Review and Meta-Analysis.	Hu Y, Ye Z, She Y, Li L, Wu M, Qin K, Li Y, He H, Hu Z, Yang M, Lu F, Ye Q.	Front Pharmacol	10.3389/fphar.2022.844961	2022
Metabolism	[Proteomic analysis of Bacillus subtilis 168 transforming cis-propenylphosphonic acid to fosfomycin].	Xie F, Chao Y, Shi J, Zhang G, Yang J, Qian S.	Sheng Wu Gong Cheng Xue Bao		2013
	Enterococcal bacteremia in mice is prevented by oral administration of probiotic Bacillus spores.	Piewngam P, Chiou J, Ling J, Liu R, Pupa P, Zheng Y, Otto M.	Sci Transl Med	10.1126/scitranslmed.abf4692	2021
Enzymology	Development of a rifampicin-resistant Bacillus subtilis strain for natto-fermentation showing enhanced exoenzyme production.	Kubo Y, Inaoka T, Hachiya T, Miyake M, Hase S, Nakagawa R, Hasegawa H, Funane K, Sakakibara Y, Kimura K.	J Biosci Bioeng	10.1016/j.jbiosc.2012.12.012	2013
	ppGpp accumulation reduces the expression of the global nitrogen homeostasis-modulating NtcA regulon by affecting 2-oxoglutarate levels.	Hidese R, Ohbayashi R, Kato Y, Matsuda M, Tanaka K, Imamura S, Ashida H, Kondo A, Hasunuma T.	Commun Biol	10.1038/s42003-023-05632-1	2023
Enzymology	Investigation of spore coat display of Bacillus subtilis beta-galactosidase for developing of whole cell biocatalyst.	Tavassoli S, Hinc K, Iwanicki A, Obuchowski M, Ahmadian G.	Arch Microbiol	10.1007/s00203-013-0867-9	2013
Genetics	Conservation and Evolution of the Sporulation Gene Set in Diverse Members of the Firmicutes.	Galperin MY, Yutin N, Wolf YI, Vera Alvarez R, Koonin EV.	J Bacteriol	10.1128/jb.00079-22	2022
Metabolism	Methylphosphonate Degradation and Salt-Tolerance Genes of Two Novel Halophilic Marivita Metagenome-Assembled Genomes from Unrestored Solar Salterns.	Bueno de Mesquita CP, Zhou J, Theroux S, Tringe SG.	Genes (Basel)	10.3390/genes13010148	2022
Metabolism	An Lrp-type transcriptional regulator controls expression of the Bacillus subtilis chromate transporter.	Aguilar-Barajas E, Jacobo-Arreola S, Verduzco-Rosas LA, Jimenez-Mejia R, Ramirez-Diaz MI, Julian-Sanchez A, Riveros-Rosas H, Cervantes C.	Antonie Van Leeuwenhoek	10.1007/s10482-013-0013-3	2013
Enzymology	Purification and Characterization of a Thrombolytic Enzyme Produced by a New Strain of Bacillus subtil.	Frias J, Toubarro D, Fraga A, Botelho C, Teixeira J, Pedrosa J, Simoes N.	J Microbiol Biotechnol	10.4014/jmb.2008.08010	2021
Metabolism	Ochratoxin A reduction ability of biocontrol agent Bacillus subtilis isolated from Korean traditional fermented food Kimchi.	Shukla S, Park JH, Chung SH, Kim M.	Sci Rep	10.1038/s41598-018-26162-5	2018
	Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING.	Hou MH, Wang YC, Yang CS, Liao KF, Chang JW, Shih O, Yeh YQ, Sriramoju MK, Weng TW, Jeng US, Hsu SD, Chen Y.	Nat Commun	10.1038/s41467-023-44052-x	2023
Enzymology	High-level extracellular production of recombinant nattokinase in Bacillus subtilis WB800 by multiple tandem promoters.	Liu Z, Zheng W, Ge C, Cui W, Zhou L, Zhou Z.	BMC Microbiol	10.1186/s12866-019-1461-3	2019
	Effect of biofilm formation by Bacillus subtilis natto on menaquinone-7 biosynthesis.	Berenjian A, Chan NL, Mahanama R, Talbot A, Regtop H, Kavanagh J, Dehghani F.	Mol Biotechnol	10.1007/s12033-012-9576-x	2013
	Engineering Escherichia coli for efficient aerobic conversion of glucose to fumaric acid.	Skorokhodova AY, Gulevich AY, Debabov VG.	Biotechnol Rep (Amst)	10.1016/j.btre.2022.e00703	2022
Pathogenicity	Peptidoglycan in osteoarthritis synovial tissue is associated with joint inflammation.	Holub MN, Wahhab A, Rouse JR, Danner R, Hackner LG, Duris CB, McClune ME, Dressler JM, Strle K, Jutras BL, Edelstein AI, Lochhead RB.	Arthritis Res Ther	10.1186/s13075-024-03293-x	2024
	The Effect of Feed Supplementation with EM Bokashi® Multimicrobial Probiotic Preparation on Selected Parameters of Sow Colostrum and Milk as Indicators of the Specific and Nonspecific Immune Response.	Jarosz L, Ciszewski A, Marek A, Gradzki Z, Kaczmarek B, Rysiak A.	Probiotics Antimicrob Proteins	10.1007/s12602-021-09850-z	2022
	Recombinant HcGAPDH Protein Expressed on Probiotic Bacillus subtilis Spores Protects Sheep from Haemonchus contortus Infection by Inducing both Humoral and Cell-Mediated Responses.	Yang Y, Zhang G, Wu J, Chen X, Tong D, Yang Y, Shi H, Yao C, Zhuang L, Wang J, Du A.	mSystems	10.1128/msystems.00239-20	2020
	Fermentation products of Danshen relieved dextran sulfate sodium-induced experimental ulcerative colitis in mice.	Su L, Su Y, An Z, Zhang P, Yue Q, Zhao C, Sun X, Zhang S, Liu X, Li K, Zhao L.	Sci Rep	10.1038/s41598-021-94594-7	2021
Genetics	BSGatlas: a unified Bacillus subtilis genome and transcriptome annotation atlas with enhanced information access.	Geissler AS, Anthon C, Alkan F, Gonzalez-Tortuero E, Poulsen LD, Kallehauge TB, Breuner A, Seemann SE, Vinther J, Gorodkin J.	Microb Genom	10.1099/mgen.0.000524	2021
	Agar Plates Made from Common Supermarket Substances and Bacillus subtilis Natto as an Inexpensive Approach to Microbiology Education.	Scharfenberg FJ, Marquardt AK.	J Microbiol Biol Educ	10.1128/jmbe.v16i2.942	2015
Metabolism	Designing of an intensification process for biosynthesis and recovery of menaquinone-7.	Berenjian A, Mahanama R, Talbot A, Regtop H, Kavanagh J, Dehghani F.	Appl Biochem Biotechnol	10.1007/s12010-013-0602-7	2014
	WhyD tailors surface polymers to prevent premature bacteriolysis and direct cell elongation in Streptococcus pneumoniae.	Flores-Kim J, Dobihal GS, Bernhardt TG, Rudner DZ.	Elife	10.7554/elife.76392	2022
	The Enrichment of Whey Protein Isolate Hydrogels with Poly-gamma-Glutamic Acid Promotes the Proliferation and Osteogenic Differentiation of Preosteoblasts.	Baines DK, Platania V, Tavernaraki NN, Parati M, Wright K, Radecka I, Chatzinikolaidou M, Douglas TEL.	Gels	10.3390/gels10010018	2023
Enzymology	Computational design of glutamate dehydrogenase in Bacillus subtilis natto.	Chen LL, Wang JL, Hu Y, Qian BJ, Yao XM, Wang JF, Zhang JH.	J Mol Model	10.1007/s00894-013-1755-6	2013
	A Conserved Class II Type Thioester Domain-Containing Adhesin Is Required for Efficient Conjugation in Bacillus subtilis.	Gago-Cordoba C, Val-Calvo J, Abia D, Diaz-Talavera A, Miguel-Arribas A, Aguilar Suarez R, van Dijl JM, Wu LJ, Meijer WJJ.	mBio	10.1128/mbio.00104-21	2021
Metabolism	Antiparallel membrane topology of paired short-chain chromate transport proteins in Bacillus subtilis.	Martinez-Valencia R, Reyes-Cortes G, Ramirez-Diaz MI, Riveros-Rosas H, Cervantes C.	FEMS Microbiol Lett	10.1111/j.1574-6968.2012.02661.x	2012
Metabolism	IL-1 Fragment Modulates Immune Response Elicited by Recombinant Bacillus subtilis Spores Presenting an Antigen/Adjuvant Chimeric Protein.	Potocki W, Negri A, Peszynska-Sularz G, Hinc K, Obuchowski M, Iwanicki A.	Mol Biotechnol	10.1007/s12033-018-0117-0	2018
Genetics	An assessment of genome annotation coverage across the bacterial tree of life.	Lobb B, Tremblay BJ, Moreno-Hagelsieb G, Doxey AC.	Microb Genom	10.1099/mgen.0.000341	2020
	Integrated omics analysis reveals the alteration of gut microbiota and fecal metabolites in Cervus elaphus kansuensis.	Zhang Z, Bao C, Li Z, He C, Jin W, Li C, Chen Y.	Appl Microbiol Biotechnol	10.1007/s00253-023-12841-5	2024
	In vitro antioxidant, anti-glycation, and bile acid-lowering capacity of peanut milk fermented with Lactiplantibacillus plantarum Kinko-SU4.	Yamamoto M, Handa N, Nakamura A, Takahashi H, Kuda T.	Curr Res Food Sci	10.1016/j.crfs.2022.06.003	2022
	Synthesis and Application of Amine Functionalized Iron Oxide Nanoparticles on Menaquinone-7 Fermentation: A Step towards Process Intensification.	Ebrahiminezhad A, Varma V, Yang S, Ghasemi Y, Berenjian A.	Nanomaterials (Basel)	10.3390/nano6010001	2015
	Effect of processing and soybean cultivar on natto quality using response surface methodology.	Pradhananga M.	Food Sci Nutr	10.1002/fsn3.848	2019
Metabolism	Alkaline serine protease AprE plays an essential role in poly-gamma-glutamate production during natto fermentation.	Kada S, Ishikawa A, Ohshima Y, Yoshida K.	Biosci Biotechnol Biochem	10.1271/bbb.120965	2013
Metabolism	Rap Protein Paralogs of Bacillus thuringiensis: a Multifunctional and Redundant Regulatory Repertoire for the Control of Collective Functions.	Gastelum G, de la Torre M, Rocha J.	J Bacteriol	10.1128/jb.00747-19	2020
Metabolism	Stepwise modifications of genetic parts reinforce the secretory production of nattokinase in Bacillus subtilis.	Cui W, Suo F, Cheng J, Han L, Hao W, Guo J, Zhou Z.	Microb Biotechnol	10.1111/1751-7915.13298	2018
Metabolism	LanI-Mediated Lantibiotic Immunity in Bacillus subtilis: Functional Analysis.	Geiger C, Korn SM, Hasler M, Peetz O, Martin J, Kotter P, Morgner N, Entian KD.	Appl Environ Microbiol	10.1128/aem.00534-19	2019
Metabolism	A Decrease in Serine Levels during Growth Transition Triggers Biofilm Formation in Bacillus subtilis.	Greenwich J, Reverdy A, Gozzi K, Di Cecco G, Tashjian T, Godoy-Carter V, Chai Y.	J Bacteriol	10.1128/jb.00155-19	2019
Metabolism	Optimization of alkaline extraction of hemicellulose from sweet sorghum bagasse and its direct application for the production of acidic xylooligosaccharides by Bacillus subtilis strain MR44.	Wei L, Yan T, Wu Y, Chen H, Zhang B.	PLoS One	10.1371/journal.pone.0195616	2018
	Comparison of chemical composition and antimicrobial activity of essential oils from three Pinus species	Kim H, Lee B, Yun Kw.	Industrial crops and products.	10.1016/j.indcrop.2012.10.026	2013
	Surfactin Like Broad Spectrum Antimicrobial Lipopeptide Co-produced With Sublancin From Bacillus subtilis Strain A52: Dual Reservoir of Bioactives.	Sharma D, Singh SS, Baindara P, Sharma S, Khatri N, Grover V, Patil PB, Korpole S.	Front Microbiol	10.3389/fmicb.2020.01167	2020
	Enhanced Biosynthesis of 2-Deoxy-scyllo-inosose in Metabolically Engineered Bacillus subtilis Recombinants.	Lim JH, Hwang HH, Lee NJ, Lee JW, Seo EG, Son HB, Kim HJ, Yoon YJ, Park JW.	Front Microbiol	10.3389/fmicb.2018.02333	2018
Metabolism	A process for high-efficiency isoflavone deglycosylation using Bacillus subtilis natto NTU-18.	Kuo LC, Wu RY, Lee KT.	Appl Microbiol Biotechnol	10.1007/s00253-012-3884-8	2012
Pathogenicity	Five Surfactin Isomers Produced during Cheonggukjang Fermentation by Bacillus pumilus HY1 and Their Properties.	Hong SY, Lee DH, Lee JH, Haque MA, Cho KM.	Molecules	10.3390/molecules26154478	2021
	Research Advances in the Treatment of Allergic Rhinitis by Probiotics.	Liu P, Hu T, Kang C, Liu J, Zhang J, Ran H, Zeng X, Qiu S.	J Asthma Allergy	10.2147/jaa.s382978	2022
	Cationic Amphipathic Antimicrobial Peptides Perturb the Inner Membrane of Germinated Spores Thus Inhibiting Their Outgrowth.	Omardien S, Drijfhout JW, Zaat SA, Brul S.	Front Microbiol	10.3389/fmicb.2018.02277	2018
	Preventive Effects of Different Fermentation Times of Shuidouchi on Diphenoxylate-Induced Constipation in Mice.	Chen L, Zhang J, Suo H, Wang W, Wang H, Zhang Y, Hu Q, Zhao X, Li J.	Foods	10.3390/foods8030086	2019
	Structural insights into the regulation of SigB activity by RsbV and RsbW.	Pathak D, Jin KS, Tandukar S, Kim JH, Kwon E, Kim DY.	IUCrJ	10.1107/s2052252520007617	2020
	Probiotics and prebiotics: potential prevention and therapeutic target for nutritional management of COVID-19?	Batista KS, de Albuquerque JG, Vasconcelos MHA, Bezerra MLR, da Silva Barbalho MB, Pinheiro RO, Aquino JS.	Nutr Res Rev	10.1017/s0954422421000317	2023
Pathogenicity	A simplified curcumin targets the membrane of Bacillus subtilis.	Morao LG, Polaquini CR, Kopacz M, Torrezan GS, Ayusso GM, Dilarri G, Cavalca LB, Zielinska A, Scheffers DJ, Regasini LO, Ferreira H.	Microbiologyopen	10.1002/mbo3.683	2019
Metabolism	In Bacillus subtilis, the SatA (Formerly YyaR) Acetyltransferase Detoxifies Streptothricin via Lysine Acetylation.	Burckhardt RM, Escalante-Semerena JC.	Appl Environ Microbiol	10.1128/aem.01590-17	2017
Metabolism	Extracellular production of cycloisomaltooligosaccharide glucanotransferase and cyclodextran by a protease-deficient Bacillus subtilis host-vector system.	Kawabata Y, Kimura K, Funane K.	Appl Microbiol Biotechnol	10.1007/s00253-011-3671-y	2012
	Screening antimicrobial peptides and probiotics using multiple deep learning and directed evolution strategies.	Zhang Y, Liu LH, Xu B, Zhang Z, Yang M, He Y, Chen J, Zhang Y, Hu Y, Chen X, Sun Z, Ge Q, Wu S, Lei W, Li K, Cui H, Yang G, Zhao X, Wang M, Xia J, Cao Z, Jiang A, Wu YR.	Acta Pharm Sin B	10.1016/j.apsb.2024.05.003	2024
Metabolism	Identification of the S-transferase like superfamily bacillithiol transferases encoded by Bacillus subtilis.	Perera VR, Lapek JD, Newton GL, Gonzalez DJ, Pogliano K.	PLoS One	10.1371/journal.pone.0192977	2018
	Antagonistic interactions between phage and host factors control arbitrium lysis-lysogeny decision.	Zamora-Caballero S, Chmielowska C, Quiles-Puchalt N, Brady A, Gallego Del Sol F, Mancheno-Bonillo J, Felipe-Ruiz A, Meijer WJJ, Penades JR, Marina A.	Nat Microbiol	10.1038/s41564-023-01550-4	2024
Metabolism	Low phosphatase activity of LiaS and strong LiaR-DNA affinity explain the unusual LiaS to LiaR in vivo stoichiometry.	Jani S, Sterzenbach K, Adatrao V, Tajbakhsh G, Mascher T, Golemi-Kotra D.	BMC Microbiol	10.1186/s12866-020-01796-6	2020
Genetics	Redirected Stress Responses in a Genome-Minimized 'midiBacillus' Strain with Enhanced Capacity for Protein Secretion.	Aguilar Suarez R, Antelo-Varela M, Maass S, Neef J, Becher D, van Dijl JM.	mSystems	10.1128/msystems.00655-21	2021
	Widespread divergent transcription from bacterial and archaeal promoters is a consequence of DNA-sequence symmetry.	Warman EA, Forrest D, Guest T, Haycocks JJRJ, Wade JT, Grainger DC.	Nat Microbiol	10.1038/s41564-021-00898-9	2021
	Development of a novel strategy for robust synthetic bacterial promoters based on a stepwise evolution targeting the spacer region of the core promoter in Bacillus subtilis.	Han L, Cui W, Suo F, Miao S, Hao W, Chen Q, Guo J, Liu Z, Zhou L, Zhou Z.	Microb Cell Fact	10.1186/s12934-019-1148-3	2019
	Evaluating novel synthetic compounds active against Bacillus subtilis and Bacillus cereus spores using Live imaging with SporeTrackerX.	Omardien S, Ter Beek A, Vischer N, Montijn R, Schuren F, Brul S.	Sci Rep	10.1038/s41598-018-27529-4	2018
Genetics	Isolation and characterization of Bacillus sp. GFP-2, a novel Bacillus strain with antimicrobial activities, from Whitespotted bamboo shark intestine.	Wu J, Xu G, Jin Y, Sun C, Zhou L, Lin G, Xu R, Wei L, Fei H, Wang D, Chen J, Lv Z, Liu K.	AMB Express	10.1186/s13568-018-0614-3	2018
	Vibriocidal efficacy of Bifidobacterium bifidum and Lactobacillus acidophilus cell-free supernatants encapsulated in chitosan nanoparticles against multi-drug resistant Vibrio cholerae O1 El Tor.	Derakhshan-Sefidi M, Bakhshi B, Rasekhi A.	BMC Infect Dis	10.1186/s12879-024-09810-2	2024
	Probiotics Supplementation during Pregnancy: Can They Exert Potential Beneficial Effects against Adverse Pregnancy Outcomes beyond Gestational Diabetes Mellitus?	Poulios E, Pavlidou E, Papadopoulou SK, Rempetsioti K, Migdanis A, Mentzelou M, Chatzidimitriou M, Migdanis I, Androutsos O, Giaginis C.	Biology (Basel)	10.3390/biology13030158	2024
	Effect of Chromium Nanoparticles and Switching from a High-Fat to a Low-Fat Diet on the Cecal Microenvironment in Obese Rats.	Fotschki B, Ognik K, Cholewinska E, Grzelak-Blaszczyk K, Myszczynski K, Krauze M, Juskiewicz J.	Nutrients	10.3390/nu15143118	2023
Metabolism	The torpedo effect in Bacillus subtilis: RNase J1 resolves stalled transcription complexes.	Sikova M, Wiedermannova J, Prevorovsky M, Barvik I, Sudzinova P, Kofronova O, Benada O, Sanderova H, Condon C, Krasny L.	EMBO J	10.15252/embj.2019102500	2020
	Alterations in the Spectrum of Spontaneous Rifampicin-Resistance Mutations in the Bacillus subtilis rpoB Gene after Cultivation in the Human Spaceflight Environment.	Fajardo-Cavazos P, Leehan JD, Nicholson WL.	Front Microbiol	10.3389/fmicb.2018.00192	2018
	Analysis of the mRNAs in Spores of Bacillus subtilis.	Korza G, Camilleri E, Green J, Robinson J, Nagler K, Moeller R, Caimano MJ, Setlow P.	J Bacteriol	10.1128/jb.00007-19	2019
	Angucycline-like Aromatic Polyketide from a Novel Streptomyces Species Reveals Freshwater Snail Physa acuta as Underexplored Reservoir for Antibiotic-Producing Actinomycetes.	Safaei N, Mast Y, Steinert M, Huber K, Bunk B, Wink J.	Antibiotics (Basel)	10.3390/antibiotics10010022	2020
Metabolism	Fengycins, Cyclic Lipopeptides from Marine Bacillus subtilis Strains, Kill the Plant-Pathogenic Fungus Magnaporthe grisea by Inducing Reactive Oxygen Species Production and Chromatin Condensation.	Zhang L, Sun C.	Appl Environ Microbiol	10.1128/aem.00445-18	2018
Metabolism	Effects of Bacillus subtilis natto on milk production, rumen fermentation and ruminal microbiome of dairy cows.	Sun P, Wang JQ, Deng LF.	Animal	10.1017/s1751731112001188	2013
	A Dual-Species Biofilm with Emergent Mechanical and Protective Properties.	Yannarell SM, Grandchamp GM, Chen SY, Daniels KE, Shank EA.	J Bacteriol	10.1128/jb.00670-18	2019
	Non-human peptides revealed in blood reflect the composition of intestinal microbiota.	Arapidi GP, Urban AS, Osetrova MS, Shender VO, Butenko IO, Bukato ON, Kuznetsov AA, Saveleva TM, Nos GA, Ivanova OM, Lopukhov LV, Laikov AV, Sharova NI, Nikonova MF, Mitin AN, Martinov AI, Grigorieva TV, Ilina EN, Ivanov VT, Govorun VM.	BMC Biol	10.1186/s12915-024-01975-1	2024
	Partial Purification and Biochemical Evaluation of Protease Fraction (MA-1) from Mycoleptodonoides aitchisonii and Its Fibrinolytic Effect.	Lee SH, Song SY, Choi JH, Kim S, Lee HJ, Park JW, Park DH, Bae CS, Cho SS.	Antioxidants (Basel)	10.3390/antiox12081558	2023
	Comparison of Antifungal Activity of Bacillus Strains against Fusarium graminearum In Vitro and In Planta.	Jimenez-Quiros C, Okechukwu EC, Hong Y, Baysal O, Tor M.	Plants (Basel)	10.3390/plants11151999	2022
	Effects of Bacillus subtilis natto on performance and immune function of preweaning calves.	Sun P, Wang JQ, Zhang HT.	J Dairy Sci	10.3168/jds.2010-3263	2010
Metabolism	Understanding the transfer reaction network behind the non-processive synthesis of low molecular weight levan catalyzed by Bacillus subtilis levansucrase.	Raga-Carbajal E, Lopez-Munguia A, Alvarez L, Olvera C.	Sci Rep	10.1038/s41598-018-32872-7	2018
Genetics	Using QC-Blind for Quality Control and Contamination Screening of Bacteria DNA Sequencing Data Without Reference Genome.	Xi W, Gao Y, Cheng Z, Chen C, Han M, Yang P, Xiong G, Ning K.	Front Microbiol	10.3389/fmicb.2019.01560	2019
Metabolism	The Role of Fnr Paralogs in Controlling Anaerobic Metabolism in the Diazotroph Paenibacillus polymyxa WLY78.	Shi H, Li Y, Hao T, Liu X, Zhao X, Chen S.	Appl Environ Microbiol	10.1128/aem.03012-19	2020
	Differentiation of Naturally Produced Extracellular Membrane Vesicles from Lipid Aggregation by Glucuronoxylomannan Immunogold Transmission Electron Microscopy in Bacillus subtilis.	Brown L, Perumal G, Casadevall A.	Bio Protoc	10.21769/bioprotoc.1408	2015
	Bacteriocin formation by dominant aerobic sporeformers isolated from traditional maari.	Kabore D, Thorsen L, Nielsen DS, Berner TS, Sawadogo-Lingani H, Diawara B, Dicko MH, Jakobsen M.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2011.12.003	2012
Enzymology	Enzymatic and genetic characterization of lignin depolymerization by Streptomyces sp. S6 isolated from a tropical environment.	Riyadi FA, Tahir AA, Yusof N, Sabri NSA, Noor MJMM, Akhir FNMD, Othman N, Zakaria Z, Hara H.	Sci Rep	10.1038/s41598-020-64817-4	2020
Enzymology	Crystal structures of two Bacillus carboxylesterases with different enantioselectivities.	Rozeboom HJ, Godinho LF, Nardini M, Quax WJ, Dijkstra BW.	Biochim Biophys Acta	10.1016/j.bbapap.2014.01.003	2014
	Biosynthesis of highly pure poly-gamma-glutamic acid for biomedical applications.	Pereira CL, Antunes JC, Goncalves RM, Ferreira-da-Silva F, Barbosa MA.	J Mater Sci Mater Med	10.1007/s10856-012-4639-x	2012
	Membrane-Disrupting Activity of Cobra Cytotoxins Is Determined by Configuration of the N-Terminal Loop.	Dubovskii PV, Ignatova AA, Alekseeva AS, Starkov VG, Boldyrev IA, Feofanov AV, Utkin YN.	Toxins (Basel)	10.3390/toxins15010006	2022
	The microbiome shifts throughout the gastrointestinal tract of Bradford cattle in the Pampa biome.	de Freitas AS, Gan FC, de David DB, Wurdig Roesch LF.	PLoS One	10.1371/journal.pone.0279386	2022
Genetics	Genomic Insights Into Cadmium Resistance of a Newly Isolated, Plasmid-Free Cellulomonas sp. Strain Y8.	Chen J, Wang L, Li W, Zheng X, Li X.	Front Microbiol	10.3389/fmicb.2021.784575	2021
Biotechnology	Economical production of vitamin K₂ using crude glycerol from the by-product of biodiesel.	Zhang C, Wu D, Ren H.	Sci Rep	10.1038/s41598-020-62737-x	2020
	Biocontrol activity and action mechanism of Paenibacillus polymyxa strain Nl4 against pear Valsa canker caused by Valsa pyri.	Yuan H, Yuan M, Shi B, Wang Z, Huang T, Qin G, Hou H, Wang L, Tu H.	Front Microbiol	10.3389/fmicb.2022.950742	2022
	Clinical Approach to Post-acute Sequelae After COVID-19 Infection and Vaccination.	Hulscher N, Procter BC, Wynn C, McCullough PA.	Cureus	10.7759/cureus.49204	2023
	The Antibacterial Type VII Secretion System of Bacillus subtilis: Structure and Interactions of the Pseudokinase YukC/EssB.	Tassinari M, Doan T, Bellinzoni M, Chabalier M, Ben-Assaya M, Martinez M, Gaday Q, Alzari PM, Cascales E, Fronzes R, Gubellini F.	mBio	10.1128/mbio.00134-22	2022
	Rapid conjugative mobilization of a 100 kb segment of Bacillus subtilis chromosomal DNA is mediated by a helper plasmid with no ability for self-transfer.	Miyano M, Tanaka K, Ishikawa S, Takenaka S, Miguel-Arribas A, Meijer WJJ, Yoshida KI.	Microb Cell Fact	10.1186/s12934-017-0855-x	2018
Enzymology	A rapid and efficient method for the extraction and identification of menaquinones from Actinomycetes in wet biomass.	Xie F, Pei S, Lin X, Tian Y, Zhang G.	BMC Microbiol	10.1186/s12866-021-02240-z	2021
Metabolism	Stabilization of Bacillus subtilis Spx under cell wall stress requires the anti-adaptor protein YirB.	Rojas-Tapias DF, Helmann JD.	PLoS Genet	10.1371/journal.pgen.1007531	2018
Genetics	Complete Genomes of Bacillus coagulans S-lac and Bacillus subtilis TO-A JPC, Two Phylogenetically Distinct Probiotics.	Khatri I, Sharma S, Ramya TN, Subramanian S.	PLoS One	10.1371/journal.pone.0156745	2016
	Towards the Anaerobic Production of Surfactin Using Bacillus subtilis.	Hoffmann M, Fernandez Cano Luna DS, Xiao S, Stegemuller L, Rief K, Heravi KM, Lilge L, Henkel M, Hausmann R.	Front Bioeng Biotechnol	10.3389/fbioe.2020.554903	2020
	Flavor and Metabolite Profiles of Meat, Meat Substitutes, and Traditional Plant-Based High-Protein Food Products Available in Australia.	Kaczmarska K, Taylor M, Piyasiri U, Frank D.	Foods	10.3390/foods10040801	2021
	Effect of media and fermentation conditions on surfactin and iturin homologues produced by Bacillus natto NT-6: LC-MS analysis.	Sun D, Liao J, Sun L, Wang Y, Liu Y, Deng Q, Zhang N, Xu D, Fang Z, Wang W, Gooneratne R.	AMB Express	10.1186/s13568-019-0845-y	2019
	Mfd Affects Global Transcription and the Physiology of Stressed Bacillus subtilis Cells.	Martin HA, Sundararajan A, Ermi TS, Heron R, Gonzales J, Lee K, Anguiano-Mendez D, Schilkey F, Pedraza-Reyes M, Robleto EA.	Front Microbiol	10.3389/fmicb.2021.625705	2021
Metabolism	Effect of feeding Bacillus subtilis natto fermentation product on milk production and composition, blood metabolites and rumen fermentation in early lactation dairy cows.	Peng H, Wang JQ, Kang HY, Dong SH, Sun P, Bu DP, Zhou LY.	J Anim Physiol Anim Nutr (Berl)	10.1111/j.1439-0396.2011.01173.x	2012
	Effects of supplementation of Bacillus subtilis natto Na and N1 strains on rumen development in dairy calves	Sun P, Wang JQ, Zhang HT.	Anim Feed Sci Technol	10.1016/j.anifeedsci.2011.01.003	2011
	Presenting Influenza A M2e Antigen on Recombinant Spores of Bacillus subtilis.	Lega T, Weiher P, Obuchowski M, Nidzworski D.	PLoS One	10.1371/journal.pone.0167225	2016
Metabolism	Investigation of the phosphorylation of Bacillus subtilis LTA synthases by the serine/threonine kinase PrkC.	Pompeo F, Rismondo J, Grundling A, Galinier A.	Sci Rep	10.1038/s41598-018-35696-7	2018
	Stress-Induced, Highly Efficient, Donor Cell-Dependent Cell-to-Cell Natural Transformation in Bacillus subtilis.	Zhang X, Jin T, Deng L, Wang C, Zhang Y, Chen X.	J Bacteriol	10.1128/jb.00267-18	2018
	Microbiome Analysis of Sugarcane Juices and Biofilms from Louisiana Raw Sugar Factories.	Qi Y, Bruni GO, Klasson KT.	Microbiol Spectr	10.1128/spectrum.04345-22	2023
	Magnesium Suppresses Defects in the Formation of 70S Ribosomes as Well as in Sporulation Caused by Lack of Several Individual Ribosomal Proteins.	Akanuma G, Yamazaki K, Yagishi Y, Iizuka Y, Ishizuka M, Kawamura F, Kato-Yamada Y.	J Bacteriol	10.1128/jb.00212-18	2018
Metabolism	Bacillus subtilis IolQ (DegA) is a transcriptional repressor of iolX encoding NAD⁺-dependent scyllo-inositol dehydrogenase.	Kang DM, Michon C, Morinaga T, Tanaka K, Takenaka S, Ishikawa S, Yoshida KI.	BMC Microbiol	10.1186/s12866-017-1065-8	2017
Metabolism	Efficient media for high menaquinone-7 production: response surface methodology approach.	Berenjian A, Mahanama R, Talbot A, Biffin R, Regtop H, Valtchev P, Kavanagh J, Dehghani F.	N Biotechnol	10.1016/j.nbt.2011.07.007	2011
	Long-term outcomes of antibiotic combination therapy for ulcerative colitis.	Nishikawa Y, Sato N, Tsukinaga S, Uchiyama K, Koido S, Ishikawa D, Ohkusa T.	Ther Adv Chronic Dis	10.1177/20406223211028790	2021
	Non-essential ribosomal proteins in bacteria and archaea identified using COGs.	Galperin MY, Wolf YI, Garushyants SK, Vera Alvarez R, Koonin EV.	J Bacteriol	10.1128/jb.00058-21	2021
	Unprecedented tunability of riboswitch structure and regulatory function by sub-millimolar variations in physiological Mg2.	McCluskey K, Boudreault J, St-Pierre P, Perez-Gonzalez C, Chauvier A, Rizzi A, Beauregard PB, Lafontaine DA, Penedo JC.	Nucleic Acids Res	10.1093/nar/gkz316	2019
	Enhancement of vitamin B₆ production driven by omics analysis combined with fermentation optimization.	Tian Z, Liu L, Wu L, Yang Z, Zhang Y, Du L, Zhang D.	Microb Cell Fact	10.1186/s12934-024-02405-1	2024
Genetics	Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement.	Borriss R, Danchin A, Harwood CR, Medigue C, Rocha EPC, Sekowska A, Vallenet D.	Microb Biotechnol	10.1111/1751-7915.13043	2018
	Importance of eps genes from Bacillus subtilis in biofilm formation and swarming.	Nagorska K, Ostrowski A, Hinc K, Holland IB, Obuchowski M.	J Appl Genet	10.1007/bf03208867	2010
Genetics	From Root to Tips: Sporulation Evolution and Specialization in Bacillus subtilis and the Intestinal Pathogen Clostridioides difficile.	Ramos-Silva P, Serrano M, Henriques AO.	Mol Biol Evol	10.1093/molbev/msz175	2019
	Surface Exclusion Revisited: Function Related to Differential Expression of the Surface Exclusion System of Bacillus subtilis Plasmid pLS20.	Gago-Cordoba C, Val-Calvo J, Miguel-Arribas A, Serrano E, Singh PK, Abia D, Wu LJ, Meijer WJJ.	Front Microbiol	10.3389/fmicb.2019.01502	2019
Metabolism	Fungal mycelia and bacterial thiamine establish a mutualistic growth mechanism.	Abeysinghe G, Kuchira M, Kudo G, Masuo S, Ninomiya A, Takahashi K, Utada AS, Hagiwara D, Nomura N, Takaya N, Obana N, Takeshita N.	Life Sci Alliance	10.26508/lsa.202000878	2020
	The Effect of Iron Oxide Nanoparticles on the Menaquinone-7 Isomer Composition and Synthesis of the Biologically Significant All-Trans Isomer.	Lal N, Seifan M, Ebrahiminezhad A, Berenjian A.	Nanomaterials (Basel)	10.3390/nano13121825	2023
Metabolism	Identification of a metabolic disposal route for the oncometabolite S-(2-succino)cysteine in Bacillus subtilis.	Niehaus TD, Folz J, McCarty DR, Cooper AJL, Moraga Amador D, Fiehn O, Hanson AD.	J Biol Chem	10.1074/jbc.ra118.002925	2018
	pCold-assisted expression of a thermostable xylanase from Bacillus amyloliquefaciens: cloning, expression and characterization.	Patel DK, Dave G.	3 Biotech	10.1007/s13205-022-03315-y	2022
Metabolism	An expansin-like protein expands forage cell walls and synergistically increases hydrolysis, digestibility and fermentation of livestock feeds by fibrolytic enzymes.	Pech-Cervantes AA, Ogunade IM, Jiang Y, Irfan M, Arriola KG, Amaro FX, Gonzalez CF, DiLorenzo N, Bromfield JJ, Vyas D, Adesogan AT.	PLoS One	10.1371/journal.pone.0224381	2019
	Inactivation of aprE Gene in Bacillus subtilis 168 by Homologus Recombination.	Rabbani M, Soleymani S, Sadeghi HM, Soleimani N, Moazen F.	Avicenna J Med Biotechnol		2014
	Rhizobacterial syntrophy between a helper and a beneficiary promotes tomato plant health.	Lee SM, Thapa Magar R, Jung MK, Kong HG, Song JY, Kwon JH, Choi M, Lee HJ, Lee SY, Khan R, Kim JF, Lee SW.	ISME J	10.1093/ismejo/wrae120	2024
	In-situ generation of large numbers of genetic combinations for metabolic reprogramming via CRISPR-guided base editing.	Wang Y, Cheng H, Liu Y, Liu Y, Wen X, Zhang K, Ni X, Gao N, Fan L, Zhang Z, Liu J, Chen J, Wang L, Guo Y, Zheng P, Wang M, Sun J, Ma Y.	Nat Commun	10.1038/s41467-021-21003-y	2021
	Angiotensin-converting enzyme inhibitory peptides and isoflavonoids from soybean [Glycine max (L.) Merr.].	Ramlal A, Nautiyal A, Baweja P, Kumar V, Mehta S, Mahto RK, Tripathi S, Shanmugam A, Pujari Mallikarjuna B, Raman P, Lal SK, Raju D, Rajendran A.	Front Nutr	10.3389/fnut.2022.1068388	2022
Enzymology	Variants of the Bacillus subtilis LysR-Type Regulator GltC With Altered Activator and Repressor Function.	Dormeyer M, Lentes S, Richts B, Heermann R, Ischebeck T, Commichau FM.	Front Microbiol	10.3389/fmicb.2019.02321	2019
Metabolism	Engineering of a Bacillus amyloliquefaciens Strain with High Neutral Protease Producing Capacity and Optimization of Its Fermentation Conditions.	Wang H, Yang L, Ping Y, Bai Y, Luo H, Huang H, Yao B.	PLoS One	10.1371/journal.pone.0146373	2016
Metabolism	Signal Peptidase Is Necessary and Sufficient for Site 1 Cleavage of RsiV in Bacillus subtilis in Response to Lysozyme.	Castro AN, Lewerke LT, Hastie JL, Ellermeier CD.	J Bacteriol	10.1128/jb.00663-17	2018
Metabolism	DNA gyrase activity regulates DnaA-dependent replication initiation in Bacillus subtilis.	Samadpour AN, Merrikh H.	Mol Microbiol	10.1111/mmi.13920	2018
	The Impact of Amine-Functionalised Iron Oxide Nanoparticles on the Menaquinone-7 Isomer Profile and Production of the Bioactive Isomer.	Lal N, Seifan M, Ebrahiminezhad A, Berenjian A.	Mol Biotechnol	10.1007/s12033-023-00832-w	2024
Pathogenicity	Vitamin K as a Diet Supplement with Impact in Human Health: Current Evidence in Age-Related Diseases.	Simes DC, Viegas CSB, Araujo N, Marreiros C.	Nutrients	10.3390/nu12010138	2020
	Crystallization and preliminary X-ray diffraction analysis of YisP protein from Bacillus subtilis subsp. subtilis strain 168.	Hu Y, Jia S, Ren F, Huang CH, Ko TP, Mitchell DA, Guo RT, Zheng Y.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309112049330	2013
	Phosphorylation of the Bacillus subtilis Replication Controller YabA Plays a Role in Regulation of Sporulation and Biofilm Formation.	Garcia Garcia T, Ventroux M, Derouiche A, Bidnenko V, Correia Santos S, Henry C, Mijakovic I, Noirot-Gros MF, Poncet S.	Front Microbiol	10.3389/fmicb.2018.00486	2018
Phenotype	Cultivation in Space Flight Produces Minimal Alterations in the Susceptibility of Bacillus subtilis Cells to 72 Different Antibiotics and Growth-Inhibiting Compounds.	Morrison MD, Fajardo-Cavazos P, Nicholson WL.	Appl Environ Microbiol	10.1128/aem.01584-17	2017
	Isolated Bacillus subtilis strain 330-2 and its antagonistic genes identified by the removing PCR.	Ahmad Z, Wu J, Chen L, Dong W.	Sci Rep	10.1038/s41598-017-01940-9	2017
Enzymology	X-ray structure determination and deuteration of nattokinase.	Yanagisawa Y, Chatake T, Naito S, Ohsugi T, Yatagai C, Sumi H, Kawaguchi A, Chiba-Kamosida K, Ogawa M, Adachi T, Morimoto Y.	J Synchrotron Radiat	10.1107/s0909049513020700	2013
	GP4: an integrated Gram-Positive Protein Prediction Pipeline for subcellular localization mimicking bacterial sorting.	Grasso S, van Rij T, van Dijl JM.	Brief Bioinform	10.1093/bib/bbaa302	2021
	Visualization of Probiotic-Mediated Ca²⁺ Signaling in Intestinal Epithelial Cells In Vivo.	Adachi T, Kakuta S, Aihara Y, Kamiya T, Watanabe Y, Osakabe N, Hazato N, Miyawaki A, Yoshikawa S, Usami T, Karasuyama H, Kimoto-Nira H, Hirayama K, Tsuji NM.	Front Immunol	10.3389/fimmu.2016.00601	2016
	The significance of proline and glutamate on butanol chaotropic stress in Bacillus subtilis 168.	Mahipant G, Paemanee A, Roytrakul S, Kato J, Vangnai AS.	Biotechnol Biofuels	10.1186/s13068-017-0811-3	2017
Enzymology	A simple and cost-saving approach to optimize the production of subtilisin NAT by submerged cultivation of Bacillus subtilis natto.	Ku TW, Tsai RL, Pan TM.	J Agric Food Chem	10.1021/jf8024198	2009
	Corynebacterium glutamicum Regulation beyond Transcription: Organizing Principles and Reconstruction of an Extended Regulatory Network Incorporating Regulations Mediated by Small RNA and Protein-Protein Interactions.	Escorcia-Rodriguez JM, Tauch A, Freyre-Gonzalez JA.	Microorganisms	10.3390/microorganisms9071395	2021
Metabolism	Maturation of polycistronic mRNAs by the endoribonuclease RNase Y and its associated Y-complex in Bacillus subtilis.	DeLoughery A, Lalanne JB, Losick R, Li GW.	Proc Natl Acad Sci U S A	10.1073/pnas.1803283115	2018
Enzymology	Gene cloning and characterization of a xylanase from a newly isolated Bacillus subtilis strain R5.	Jalal A, Rashid N, Rasool N, Akhtar M.	J Biosci Bioeng	10.1016/j.jbiosc.2008.12.005	2009
Metabolism	Heterologous expression of antigenic peptides in Bacillus subtilis biofilms.	Vogt CM, Schraner EM, Aguilar C, Eichwald C.	Microb Cell Fact	10.1186/s12934-016-0532-5	2016
Metabolism	Pneumolysin Induces 12-Lipoxygenase-Dependent Neutrophil Migration during Streptococcus pneumoniae Infection.	Adams W, Bhowmick R, Bou Ghanem EN, Wade K, Shchepetov M, Weiser JN, McCormick BA, Tweten RK, Leong JM.	J Immunol	10.4049/jimmunol.1800748	2020
Metabolism	Suppression of pullulanase-induced cytotoxic T cell response with a dual promoter in GSD IIIa mice.	Lim JA, Kishnani PS, Sun B.	JCI Insight	10.1172/jci.insight.152970	2022
	Molecular characterization of an unauthorized genetically modified Bacillus subtilis production strain identified in a vitamin B₂ feed additive.	Paracchini V, Petrillo M, Reiting R, Angers-Loustau A, Wahler D, Stolz A, Schonig B, Matthies A, Bendiek J, Meinel DM, Pecoraro S, Busch U, Patak A, Kreysa J, Grohmann L.	Food Chem	10.1016/j.foodchem.2017.03.042	2017
Metabolism	Aspartate deficiency limits peptidoglycan synthesis and sensitizes cells to antibiotics targeting cell wall synthesis in Bacillus subtilis.	Zhao H, Roistacher DM, Helmann JD.	Mol Microbiol	10.1111/mmi.14078	2018
Genetics	Unveiling the complete genome sequence of Alicyclobacillus acidoterrestris DSM 3922T, a taint-producing strain.	Leonardo IC, Barreto Crespo MT, Gaspar FB.	G3 (Bethesda)	10.1093/g3journal/jkac225	2022
	Phylogenetic distribution of malonate semialdehyde decarboxylase (MSAD) genes among strains within the genus Mycobacterium: evidence of MSAD gene loss in the evolution of pathogenic mycobacteria.	Lee D, Kim DH, Seo H, Choi S, Kim BJ.	Front Microbiol	10.3389/fmicb.2023.1275616	2023
	Bacillus amyloliquefaciens-9 Reduces Somatic Cell Count and Modifies Fecal Microbiota in Lactating Goats.	Li Y, Jiang N, Zhang W, Lv Z, Liu J, Shi H.	Mar Drugs	10.3390/md19080404	2021
	Reversible regulation of conjugation of Bacillus subtilis plasmid pLS20 by the quorum sensing peptide responsive anti-repressor RappLS20.	Singh PK, Serrano E, Ramachandran G, Miguel-Arribas A, Gago-Cordoba C, Val-Calvo J, Lopez-Perez A, Alfonso C, Wu LJ, Luque-Ortega JR, Meijer WJJ.	Nucleic Acids Res	10.1093/nar/gkaa797	2020
	Identification of conserved slow codons that are important for protein expression and function.	Perach M, Zafrir Z, Tuller T, Lewinson O.	RNA Biol	10.1080/15476286.2021.1901185	2021
Pathogenicity	Genomic and metabolic insights into the first host-associated isolate of Psychrilyobacter.	Liu M, Wei G, Lai Q, Huang Z, Li M, Shao Z.	Microbiol Spectr	10.1128/spectrum.03990-22	2023
Metabolism	Amyloid-degrading ability of nattokinase from Bacillus subtilis natto.	Hsu RL, Lee KT, Wang JH, Lee LY, Chen RP.	J Agric Food Chem	10.1021/jf803072r	2009
Metabolism	Inhibition of NHEJ repair by type II-A CRISPR-Cas systems in bacteria.	Bernheim A, Calvo-Villamanan A, Basier C, Cui L, Rocha EPC, Touchon M, Bikard D.	Nat Commun	10.1038/s41467-017-02350-1	2017
	Construction and Application of a Plasmid-Based Signal Peptide Library for Improved Secretion of Recombinant Proteins with Priestia megaterium.	Mayer J, Knuuti T, Baumgarten L, Menke E, Bischoff L, Bunk B, Biedendieck R.	Microorganisms	10.3390/microorganisms10040777	2022
	Effects of the synbiotic composed of mangiferin and Lactobacillus reuteri 1-12 on type 2 diabetes mellitus rats.	Meng F, Zhang F, Meng M, Chen Q, Yang Y, Wang W, Xie H, Li X, Gu W, Yu J.	Front Microbiol	10.3389/fmicb.2023.1158652	2023
	Lesson from Ecotoxicity: Revisiting the Microbial Lipopeptides for the Management of Emerging Diseases for Crop Protection.	Malviya D, Sahu PK, Singh UB, Paul S, Gupta A, Gupta AR, Singh S, Kumar M, Paul D, Rai JP, Singh HV, Brahmaprakash GP.	Int J Environ Res Public Health	10.3390/ijerph17041434	2020
Metabolism	Expression of multiple Bacillus subtilis genes is controlled by decay of slrA mRNA from Rho-dependent 3' ends.	Liu B, Kearns DB, Bechhofer DH.	Nucleic Acids Res	10.1093/nar/gkw069	2016
Metabolism	Phosphoglycerol-type wall and lipoteichoic acids are enantiomeric polymers differentiated by the stereospecific glycerophosphodiesterase GlpQ.	Walter A, Unsleber S, Rismondo J, Jorge AM, Peschel A, Grundling A, Mayer C.	J Biol Chem	10.1074/jbc.ra120.012566	2020
Pathogenicity	Berkchaetoazaphilone B has antimicrobial activity and affects energy metabolism.	Ouyang X, Hoeksma J, van der Velden G, Beenker WAG, van Triest MH, Burgering BMT, den Hertog J.	Sci Rep	10.1038/s41598-021-98252-w	2021
Metabolism	Genetically Engineering Bacillus subtilis with a Heat-Resistant Arsenite Methyltransferase for Bioremediation of Arsenic-Contaminated Organic Waste.	Huang K, Chen C, Shen Q, Rosen BP, Zhao FJ.	Appl Environ Microbiol	10.1128/aem.01535-15	2015
	THE Effects of dipicolinic acid on the thrombolytic activity of human cells	OHSUGI T, SUMI H.	J Food Biochem	10.1111/j.1745-4514.2010.00388.x	2011
Metabolism	Transcriptional and translational S-box riboswitches differ in ligand-binding properties.	Bhagdikar D, Grundy FJ, Henkin TM.	J Biol Chem	10.1074/jbc.ra120.012853	2020
	PamR, a new MarR-like regulator affecting prophages and metabolic genes expression in Bacillus subtilis.	De San Eustaquio-Campillo A, Cornilleau C, Guerin C, Carballido-Lopez R, Chastanet A.	PLoS One	10.1371/journal.pone.0189694	2017
Metabolism	Comparative Genomics of Bacillus amyloliquefaciens Strains Reveals a Core Genome with Traits for Habitat Adaptation and a Secondary Metabolites Rich Accessory Genome.	Belbahri L, Chenari Bouket A, Rekik I, Alenezi FN, Vallat A, Luptakova L, Petrovova E, Oszako T, Cherrad S, Vacher S, Rateb ME.	Front Microbiol	10.3389/fmicb.2017.01438	2017
Metabolism	Cloning, expression, and characterization of two beta-glucosidases from isoflavone glycoside-hydrolyzing Bacillus subtilis natto.	Kuo LC, Lee KT.	J Agric Food Chem	10.1021/jf072287q	2008
	Improvement of Biological Indicators by Uniformly Distributing Bacillus subtilis Spores in Monolayers To Evaluate Enhanced Spore Decontamination Technologies.	Raguse M, Fiebrandt M, Stapelmann K, Madela K, Laue M, Lackmann JW, Thwaite JE, Setlow P, Awakowicz P, Moeller R.	Appl Environ Microbiol	10.1128/aem.03934-15	2016
Metabolism	A novel bipartite antitermination system widespread in conjugative elements of Gram-positive bacteria.	Miguel-Arribas A, Val-Calvo J, Gago-Cordoba C, Izquierdo JM, Abia D, Wu LJ, Errington J, Meijer WJJ.	Nucleic Acids Res	10.1093/nar/gkab360	2021
	Effect of Feeding Bacillus subtilis natto on Hindgut Fermentation and Microbiota of Holstein Dairy Cows.	Song DJ, Kang HY, Wang JQ, Peng H, Bu DP.	Asian-Australas J Anim Sci	10.5713/ajas.2013.13522	2014
	Induction of apoptosis in human leukemia K562 cells by cyclic lipopeptide from Bacillus subtilis natto T-2.	Wang CL, Ng TB, Yuan F, Liu ZK, Liu F.	Peptides	10.1016/j.peptides.2007.06.014	2007
	SpoVG is Necessary for Sporulation in Bacillus anthracis.	Chen M, Lyu Y, Feng E, Zhu L, Pan C, Wang D, Liu X, Wang H.	Microorganisms	10.3390/microorganisms8040548	2020
	Stationary-Phase Mutagenesis in Stressed Bacillus subtilis Cells Operates by Mfd-Dependent Mutagenic Pathways.	Gomez-Marroquin M, Martin HA, Pepper A, Girard ME, Kidman AA, Vallin C, Yasbin RE, Pedraza-Reyes M, Robleto EA.	Genes (Basel)	10.3390/genes7070033	2016
	Experimental evolution of enhanced growth by Bacillus subtilis at low atmospheric pressure: genomic changes revealed by whole-genome sequencing.	Waters SM, Waters SM, Zeigler DR, Nicholson WL.	Appl Environ Microbiol	10.1128/aem.01690-15	2015
Metabolism	Bacillus subtilis 5'-nucleotidases with various functions and substrate specificities.	Terakawa A, Natsume A, Okada A, Nishihata S, Kuse J, Tanaka K, Takenaka S, Ishikawa S, Yoshida KI.	BMC Microbiol	10.1186/s12866-016-0866-5	2016
	Use of Nonspecific, Glutamic Acid-Free, Media and High Glycerol or High Amylase as Inducing Parameters for Screening Bacillus Isolates Having High Yield of Polyglutamic Acid.	Baxi NN.	Int Sch Res Notices	10.1155/2014/608739	2014
Enzymology	The protein tyrosine kinases EpsB and PtkA differentially affect biofilm formation in Bacillus subtilis.	Gerwig J, Kiley TB, Gunka K, Stanley-Wall N, Stulke J.	Microbiology (Reading)	10.1099/mic.0.074971-0	2014
Enzymology	Potential Application of Hippophae Rhamnoides in Wheat Bread Production.	Ghendov-Mosanu A, Cristea E, Patras A, Sturza R, Padureanu S, Deseatnicova O, Turculet N, Boestean O, Niculaua M.	Molecules	10.3390/molecules25061272	2020
Phylogeny	Classification of a new phytoplasmas subgroup 16SrII-W associated with Crotalaria witches' broom diseases in Oman based on multigene sequence analysis.	Al-Subhi A, Hogenhout SA, Al-Yahyai RA, Al-Sadi AM.	BMC Microbiol	10.1186/s12866-017-1130-3	2017
	Structural analysis of Clostridium acetobutylicum ATCC 824 glycoside hydrolase from CAZy family GH105.	Germane KL, Servinsky MD, Gerlach ES, Sund CJ, Hurley MM.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x15012121	2015
	Study of the tensile properties of individual multicellular fibres generated by Bacillus subtilis.	Ye X, Zhao L, Liang J, Li X, Chen GQ.	Sci Rep	10.1038/srep46052	2017
Metabolism	PksS from Bacillus subtilis is a cytochrome P450 involved in bacillaene metabolism.	Reddick JJ, Antolak SA, Raner GM.	Biochem Biophys Res Commun	10.1016/j.bbrc.2007.04.151	2007
	The Bacillus subtilis Conjugative Plasmid pLS20 Encodes Two Ribbon-Helix-Helix Type Auxiliary Relaxosome Proteins That Are Essential for Conjugation.	Miguel-Arribas A, Hao JA, Luque-Ortega JR, Ramachandran G, Val-Calvo J, Gago-Cordoba C, Gonzalez-Alvarez D, Abia D, Alfonso C, Wu LJ, Meijer WJJ.	Front Microbiol	10.3389/fmicb.2017.02138	2017
	Dietary Probiotic Compound Improves Reproductive Performance of Porcine Epidemic Diarrhea Virus-Infected Sows Reared in a Japanese Commercial Swine Farm under Vaccine Control Condition.	Inatomi T, Amatatsu M, Romero-Perez GA, Inoue R, Tsukahara T.	Front Immunol	10.3389/fimmu.2017.01877	2017
Stress	Germination, Outgrowth, and Vegetative-Growth Kinetics of Dry-Heat-Treated Individual Spores of Bacillus Species.	He L, Chen Z, Wang S, Wu M, Setlow P, Li YQ.	Appl Environ Microbiol	10.1128/aem.02618-17	2018
Metabolism	Reconstitution and Minimization of a Micrococcin Biosynthetic Pathway in Bacillus subtilis.	Bennallack PR, Bewley KD, Burlingame MA, Robison RA, Miller SM, Griffitts JS.	J Bacteriol	10.1128/jb.00396-16	2016
	High-Quality Genome-Scale Models From Error-Prone, Long-Read Assemblies.	Broddrick JT, Szubin R, Norsigian CJ, Monk JM, Palsson BO, Parenteau MN.	Front Microbiol	10.3389/fmicb.2020.596626	2020
	Characterization of lpaH2 gene corresponding to lipopeptide synthesis in Bacillus amyloliquefaciens HAB-2.	Jin P, Wang H, Liu W, Miao W.	BMC Microbiol	10.1186/s12866-017-1134-z	2017
Metabolism	Surfactin and fengycin lipopeptides of Bacillus subtilis as elicitors of induced systemic resistance in plants.	Ongena M, Jourdan E, Adam A, Paquot M, Brans A, Joris B, Arpigny JL, Thonart P.	Environ Microbiol	10.1111/j.1462-2920.2006.01202.x	2007
Genetics	Codon Usage Optimization in the Prokaryotic Tree of Life: How Synonymous Codons Are Differentially Selected in Sequence Domains with Different Expression Levels and Degrees of Conservation.	Lopez JL, Lozano MJ, Fabre ML, Lagares A.	mBio	10.1128/mbio.00766-20	2020
Metabolism	Aag Hypoxanthine-DNA Glycosylase Is Synthesized in the Forespore Compartment and Involved in Counteracting the Genotoxic and Mutagenic Effects of Hypoxanthine and Alkylated Bases in DNA during Bacillus subtilis Sporulation.	Ayala-Garcia VM, Valenzuela-Garcia LI, Setlow P, Pedraza-Reyes M.	J Bacteriol	10.1128/jb.00625-16	2016
Metabolism	c-di-AMP, a likely master regulator of bacterial K⁺ homeostasis machinery, activates a K⁺ exporter.	Cereija TB, Guerra JPL, Jorge JMP, Morais-Cabral JH.	Proc Natl Acad Sci U S A	10.1073/pnas.2020653118	2021
Enzymology	Effects of Effective Microorganisms on Meat Quality, Microstructure of the Longissimus Lumborum Muscle, and Electrophoretic Protein Separation in Pigs Fed on Different Diets.	Reszka P, Cygan-Szczegielniak D, Jankowiak H, Cebulska A, Mikolajczak B, Bogucka J.	Animals (Basel)	10.3390/ani10101755	2020
	pLS20 is the archetype of a new family of conjugative plasmids harboured by Bacillus species.	Val-Calvo J, Miguel-Arribas A, Abia D, Wu LJ, Meijer WJJ.	NAR Genom Bioinform	10.1093/nargab/lqab096	2021
	Bacillus subtilis Bactofilins Are Essential for Flagellar Hook- and Filament Assembly and Dynamically Localize into Structures of Less than 100 nm Diameter underneath the Cell Membrane.	El Andari J, Altegoer F, Bange G, Graumann PL.	PLoS One	10.1371/journal.pone.0141546	2015
Enzymology	In vitro imaging of bacteria using ¹⁸F-fluorodeoxyglucose micro positron emission tomography.	Heuker M, Sijbesma JWA, Aguilar Suarez R, de Jong JR, Boersma HH, Luurtsema G, Elsinga PH, Glaudemans AWJM, van Dam GM, van Dijl JM, Slart RHJA, van Oosten M.	Sci Rep	10.1038/s41598-017-05403-z	2017
Metabolism	Exposure of Bacillus subtilis to low pressure (5 kilopascals) induces several global regulons, including those involved in the SigB-mediated general stress response.	Waters SM, Waters SM, Robles-Martinez JA, Nicholson WL.	Appl Environ Microbiol	10.1128/aem.00885-14	2014
	Isolation of a novel mutant from Bacillus subtilis natto.	Yoshida K.	Nucleic Acids Symp Ser (Oxf)	10.1093/nass/nrl136	2006
Metabolism	Impact of Hfq on the Bacillus subtilis transcriptome.	Hammerle H, Amman F, Vecerek B, Stulke J, Hofacker I, Blasi U.	PLoS One	10.1371/journal.pone.0098661	2014
Metabolism	Nattokinase-promoted tissue plasminogen activator release from human cells.	Yatagai C, Maruyama M, Kawahara T, Sumi H.	Pathophysiol Haemost Thromb	10.1159/000252817	2008
	Genome sequencing of biocontrol strain Bacillus amyloliquefaciens Bam1 and further analysis of its heavy metal resistance mechanism.	Luo Y, Chen L, Lu Z, Zhang W, Liu W, Chen Y, Wang X, Du W, Luo J, Wu H.	Bioresour Bioprocess	10.1186/s40643-022-00563-x	2022
	Separation of Heat-Stable Antifungal Factor From Lysobacter enzymogenes Fermentation Broth via Photodegradation and Macroporous Resin Adsorption.	Tang B, Wu L, Wang J, Sun W, Zhao Y, Liu F.	Front Microbiol	10.3389/fmicb.2021.663065	2021
Metabolism	CotG-Like Modular Proteins Are Common among Spore-Forming Bacilli.	Saggese A, Isticato R, Cangiano G, Ricca E, Baccigalupi L.	J Bacteriol	10.1128/jb.00023-16	2016
	Dendrobium officinale Enzyme Changing the Structure and Behaviors of Chitosan/gamma-poly(glutamic acid) Hydrogel for Potential Skin Care.	Wang M, Zhang E, Yu C, Liu D, Zhao S, Xu M, Zhao X, Yue W, Nie G.	Polymers (Basel)	10.3390/polym14102070	2022
Enzymology	A method for extracting RNA from dormant and germinating Bacillus subtilis strain 168 endospores.	Moeller R, Horneck G, Rettberg P, Mollenkopf HJ, Stackebrandt E, Nicholson WL.	Curr Microbiol	10.1007/s00284-006-0099-1	2006
Metabolism	Automation assisted anaerobic phenotyping for metabolic engineering.	Raj K, Venayak N, Diep P, Golla SA, Yakunin AF, Mahadevan R.	Microb Cell Fact	10.1186/s12934-021-01675-3	2021
	Insights into the mechanism of action of the arbitrium communication system in SPbeta phages.	Gallego Del Sol F, Quiles-Puchalt N, Brady A, Penades JR, Marina A.	Nat Commun	10.1038/s41467-022-31144-3	2022
Metabolism	Discovery of a widespread prokaryotic 5-oxoprolinase that was hiding in plain sight.	Niehaus TD, Elbadawi-Sidhu M, de Crecy-Lagard V, Fiehn O, Hanson AD.	J Biol Chem	10.1074/jbc.m117.805028	2017
Metabolism	Stabilizing displayed proteins on vegetative Bacillus subtilis cells.	Huang GL, Gosschalk JE, Kim YS, Ogorzalek Loo RR, Clubb RT.	Appl Microbiol Biotechnol	10.1007/s00253-018-9062-x	2018
	Mucosal adjuvant activity of IL-2 presenting spores of bacillus subtilis in a murine model of Helicobacter pylori vaccination.	Hinc K, Stasilojc M, Piatek I, Peszynska-Sularz G, Isticato R, Ricca E, Obuchowski M, Iwanicki A.	PLoS One	10.1371/journal.pone.0095187	2014
	Role of Probiotics in Modulating Human Gut Microbiota Populations and Activities in Patients with Colorectal Cancer-A Systematic Review of Clinical Trials.	Wierzbicka A, Mankowska-Wierzbicka D, Mardas M, Stelmach-Mardas M.	Nutrients	10.3390/nu13041160	2021
Enzymology	Enhanced thermal stability and hydrolytic ability of Bacillus subtilis aminopeptidase by removing the thermal sensitive domain in the non-catalytic region.	Gao X, Liu Z, Cui W, Zhou L, Tian Y, Zhou Z.	PLoS One	10.1371/journal.pone.0092357	2014
Metabolism	A system of vectors for Bacillus subtilis spore surface display.	Iwanicki A, Piatek I, Stasilojc M, Grela A, Lega T, Obuchowski M, Hinc K.	Microb Cell Fact	10.1186/1475-2859-13-30	2014
	Bacillus pumilus B12 Degrades Polylactic Acid and Degradation Is Affected by Changing Nutrient Conditions.	Bonifer KS, Wen X, Hasim S, Phillips EK, Dunlap RN, Gann ER, DeBruyn JM, Reynolds TB.	Front Microbiol	10.3389/fmicb.2019.02548	2019
	OmpA signal peptide leads to heterogenous secretion of B. subtilis chitosanase enzyme from E. coli expression system.	Pechsrichuang P, Songsiriritthigul C, Haltrich D, Roytrakul S, Namvijtr P, Bonaparte N, Yamabhai M.	Springerplus	10.1186/s40064-016-2893-y	2016
	Interaction of Bacillus subtilis Polynucleotide Phosphorylase and RNase Y: STRUCTURAL MAPPING AND EFFECT ON mRNA TURNOVER.	Salvo E, Alabi S, Liu B, Schlessinger A, Bechhofer DH.	J Biol Chem	10.1074/jbc.m115.711044	2016
	Molecular characterization of a novel strain of Bacillus halotolerans protecting wheat from sheath blight disease caused by Rhizoctonia solani Kühn.	Feng Z, Xu M, Yang J, Zhang R, Geng Z, Mao T, Sheng Y, Wang L, Zhang J, Zhang H.	Front Plant Sci	10.3389/fpls.2022.1019512	2022
Metabolism	Characterization of the regulation of a plant polysaccharide utilization operon and its role in biofilm formation in Bacillus subtilis.	Habib C, Yu Y, Gozzi K, Ching C, Shemesh M, Chai Y.	PLoS One	10.1371/journal.pone.0179761	2017
Metabolism	Identification and solution structures of a single domain biotin/lipoyl attachment protein from Bacillus subtilis.	Cui G, Nan B, Hu J, Wang Y, Jin C, Xia B.	J Biol Chem	10.1074/jbc.m602660200	2006
	Targeting FMN, TPP, SAM-I, and glmS Riboswitches with Chimeric Antisense Oligonucleotides for Completely Rational Antibacterial Drug Development.	Pavlova N, Traykovska M, Penchovsky R.	Antibiotics (Basel)	10.3390/antibiotics12111607	2023
	The Transcription Factor CpcR Determines Cell Fate by Modulating the Initiation of Sporulation in Bacillus thuringiensis.	Hou S, Zhang R, Lereclus D, Peng Q, Zhang J, Slamti L, Song F.	Appl Environ Microbiol	10.1128/aem.02374-21	2022
	Antibacterial activity of silver nanoparticles obtained by pulsed laser ablation in pure water and in chloride solution.	Perito B, Giorgetti E, Marsili P, Muniz-Miranda M.	Beilstein J Nanotechnol	10.3762/bjnano.7.40	2016
Metabolism	Nitrite modulates aminoglycoside tolerance by inhibiting cytochrome heme-copper oxidase in bacteria.	Zhang Y, Guo K, Meng Q, Gao H.	Commun Biol	10.1038/s42003-020-0991-4	2020
	Stoichiometric Conversion of Maltose for Biomanufacturing by In Vitro Synthetic Enzymatic Biosystems.	Li G, Wei X, Wu R, Zhou W, Li Y, Zhu Z, You C.	Biodes Res	10.34133/2022/9806749	2022
	Midecamycin Is Inactivated by Several Different Sugar Moieties at Its Inactivation Site.	Lin R, Hong LL, Jiang ZK, Li KM, He WQ, Kong JQ.	Int J Mol Sci	10.3390/ijms222312636	2021
	Homogeneity and heterogeneity in amylase production by Bacillus subtilis under different growth conditions.	Ploss TN, Reilman E, Monteferrante CG, Denham EL, Piersma S, Lingner A, Vehmaanpera J, Lorenz P, van Dijl JM.	Microb Cell Fact	10.1186/s12934-016-0455-1	2016
Metabolism	Hydrolysis of black soybean isoflavone glycosides by Bacillus subtilis natto.	Kuo LC, Cheng WY, Wu RY, Huang CJ, Lee KT.	Appl Microbiol Biotechnol	10.1007/s00253-006-0474-7	2006
	A newly derived protein from Bacillus subtilis natto with both antithrombotic and fibrinolytic effects.	Omura K, Hitosugi M, Zhu X, Ikeda M, Maeda H, Tokudome S.	J Pharmacol Sci	10.1254/jphs.fp0050408	2005
	Importance of Individual Germination Receptor Subunits in the Cooperative Function between GerA and Ynd.	Aspholm M, Borch-Pedersen K, O'Sullivan K, Fjellheim S, Aardal IB, Granum PE, Lindback T.	J Bacteriol	10.1128/jb.00451-19	2019
Metabolism	Glutamate Dehydrogenase Functions in Glutamic Acid Metabolism and Stress Resistance in Pyropia haitanensis.	Li S, Shao Z, Lu C, Yao J, Zhou Y, Duan D.	Molecules	10.3390/molecules26226793	2021
Enzymology	Efficient constitutive expression of Bacillus subtilis xylanase A in Escherichia coli DH5alpha under the control of the Bacillus BsXA promoter.	Ruller R, Ruller R, Rosa JC, Faca VM, Greene LJ, Ward RJ.	Biotechnol Appl Biochem	10.1042/ba20050016	2006
Metabolism	Metabolic flux responses to genetic modification for shikimic acid production by Bacillus subtilis strains.	Liu DF, Ai GM, Zheng QX, Liu C, Jiang CY, Liu LX, Zhang B, Liu YM, Yang C, Liu SJ.	Microb Cell Fact	10.1186/1475-2859-13-40	2014
	In vitro study of the antioxidative and antiproliferative capabilities of Lactobacillus casei 16-fermented soymilk.	Qian F, Zhang J, Hou K, Zhang Y, Wang Z, Luo P, Tuo Y.	Food Sci Nutr	10.1002/fsn3.1214	2020
	Mosquito larvicidal effectiveness of EcoBio-Block S: a novel integrated water-purifying concrete block formulation containing insect growth regulator pyriproxyfen.	Kawada H, Saita S, Shimabukuro K, Hirano M, Koga M, Iwashita T, Takagi M.	J Am Mosq Control Assoc	10.2987/8756-971x(2006)22[451:mleoes]2.0.co;2	2006
Metabolism	A New Type of YumC-Like Ferredoxin (Flavodoxin) Reductase Is Involved in Ribonucleotide Reduction.	Chen J, Shen J, Solem C, Jensen PR.	mBio	10.1128/mbio.01132-15	2015
Enzymology	Correlation of temperature induced conformation change with optimum catalytic activity in the recombinant G/11 xylanase A from Bacillus subtilis strain 168 (1A1).	Murakami MT, Arni RK, Vieira DS, Degreve L, Ruller R, Ruller R, Ward RJ.	FEBS Lett	10.1016/j.febslet.2005.10.039	2005
Metabolism	Identification of two major ammonia-releasing reactions involved in secondary natto fermentation.	Kada S, Yabusaki M, Kaga T, Ashida H, Yoshida K.	Biosci Biotechnol Biochem	10.1271/bbb.80129	2008
Metabolism	Depletion of Undecaprenyl Pyrophosphate Phosphatases Disrupts Cell Envelope Biogenesis in Bacillus subtilis.	Zhao H, Sun Y, Peters JM, Gross CA, Garner EC, Helmann JD.	J Bacteriol	10.1128/jb.00507-16	2016
Metabolism	Overlapping and Distinct Functions of the Paralogous PagR Regulators of Bacillus anthracis.	Corsi ID, Koehler TM.	J Bacteriol	10.1128/jb.00208-22	2022
	Relationship between cardiolipin metabolism and oxygen availability in Bacillus subtilis.	Lobasso S, Palese LL, Angelini R, Corcelli A.	FEBS Open Bio	10.1016/j.fob.2013.02.002	2013
	Multidrug-Resistant Bacterial Isolates Recovered from Herbal Medicinal Products Sold in Nairobi, Kenya.	Korir R, Anzala O, Jaoko W, Bii C, Keter L.	East Afr Health Res J	10.24248/eahrj-d-17-00027	2017
	Development of triaryl antimicrobials by scaffold hopping from an aminopropanol hit targeting bacterial RNA polymerase-NusG interactions.	Liu T, Kan CH, Zheng Y, Tsang TF, Liu Y, Tsang MW, Fang H, Lam LY, Yang X, Ma C.	J Enzyme Inhib Med Chem	10.1080/14756366.2025.2543923	2025
Pathogenicity	Cytosolic Phospholipase A₂alpha Promotes Pulmonary Inflammation and Systemic Disease during Streptococcus pneumoniae Infection.	Bhowmick R, Clark S, Bonventre JV, Leong JM, McCormick BA.	Infect Immun	10.1128/iai.00280-17	2017
	Novel Genetic Dysregulations and Oxidative Damage in Fusarium graminearum Induced by Plant Defense Eliciting Psychrophilic Bacillus atrophaeus TS1.	Zubair M, Farzand A, Mumtaz F, Khan AR, Sheikh TMM, Haider MS, Yu C, Wang Y, Ayaz M, Gu Q, Gao X, Wu H.	Int J Mol Sci	10.3390/ijms222212094	2021
	Inhibition of SRP-dependent protein secretion by the bacterial alarmone (p)ppGpp.	Czech L, Mais CN, Kratzat H, Sarmah P, Giammarinaro P, Freibert SA, Esser HF, Musial J, Berninghausen O, Steinchen W, Beckmann R, Koch HG, Bange G.	Nat Commun	10.1038/s41467-022-28675-0	2022
Metabolism	CLP induces apoptosis in human leukemia K562 cells through Ca(2+) regulating extracellular-related protein kinase ERK activation.	Wang CL, Ng TB, Cao XH, Jiang Y, Liu ZK, Wen TY, Liu F.	Cancer Lett	10.1016/j.canlet.2008.11.007	2009
	Open reading frame yjbI of Bacillus subtilis codes for truncated hemoglobin.	Choudhary ML, Jawaid S, Ahuja MK, Shiva NK, Gupta P, Bhuyan AK, Khatri GS.	Protein Expr Purif	10.1016/j.pep.2005.02.022	2005
Metabolism	Importance of Glutamate Dehydrogenase (GDH) in Clostridium difficile Colonization In Vivo.	Girinathan BP, Braun S, Sirigireddy AR, Lopez JE, Govind R.	PLoS One	10.1371/journal.pone.0160107	2016
	Optimization of the production and characterization of milk clotting enzymes by Bacillus subtilis natto.	Wu FC, Chang CW, Shih IL.	Springerplus	10.1186/2193-1801-2-33	2013
Metabolism	Regulation of alginate catabolism involves a GntR family repressor in the marine flavobacterium Zobellia galactanivorans DsijT.	Dudek M, Dieudonne A, Jouanneau D, Rochat T, Michel G, Sarels B, Thomas F.	Nucleic Acids Res	10.1093/nar/gkaa533	2020
Metabolism	Hydrolysis of peptidoglycan is modulated by amidation of meso-diaminopimelic acid and Mg²⁺ in Bacillus subtilis.	Dajkovic A, Tesson B, Chauhan S, Courtin P, Keary R, Flores P, Marliere C, Filipe SR, Chapot-Chartier MP, Carballido-Lopez R.	Mol Microbiol	10.1111/mmi.13673	2017
Pathogenicity	Discovery of novel cell wall-active compounds using P ywaC, a sensitive reporter of cell wall stress, in the model gram-positive bacterium Bacillus subtilis.	Czarny TL, Perri AL, French S, Brown ED.	Antimicrob Agents Chemother	10.1128/aac.02352-14	2014
Metabolism	Deciphering the Molecular Mechanism Underpinning Phage Arbitrium Communication Systems.	Gallego Del Sol F, Penades JR, Marina A.	Mol Cell	10.1016/j.molcel.2019.01.025	2019
Enzymology	Purification, crystallization and preliminary X-ray diffraction experiment of nattokinase from Bacillus subtilis natto.	Yanagisawa Y, Chatake T, Chiba-Kamoshida K, Naito S, Ohsugi T, Sumi H, Yasuda I, Morimoto Y.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309110043137	2010
Metabolism	gamma-PGA Hydrolases of Phage Origin in Bacillus subtilis and Other Microbial Genomes.	Mamberti S, Prati P, Cremaschi P, Seppi C, Morelli CF, Galizzi A, Fabbi M, Calvio C.	PLoS One	10.1371/journal.pone.0130810	2015
	Synthesis and antimicrobial properties of 4-acylaminobenzenethiosulfoacid S-esters.	Lubenets V, Vasylyuk S, Monka N, Bolibrukh K, Komarovska-Porokhnyavets O, Baranovych D, Musyanovych R, Zaczynska E, Czarny A, Nawrot U, Novikov V.	Saudi Pharm J	10.1016/j.jsps.2016.06.007	2017
	X-shaped structure of bacterial heterotetrameric tRNA synthetase suggests cryptic prokaryote functions and a rationale for synthetase classifications.	Ju Y, Han L, Chen B, Luo Z, Gu Q, Xu J, Yang XL, Schimmel P, Zhou H.	Nucleic Acids Res	10.1093/nar/gkab707	2021
	Genetic analysis of an incomplete bio operon in a biotin auxotrophic strain of Bacillus subtilis natto OK2.	Sasaki M, Kawamura F, Kurusu Y.	Biosci Biotechnol Biochem	10.1271/bbb.68.739	2004
Enzymology	Glr, a glutamate racemase, supplies D-glutamate to both peptidoglycan synthesis and poly-gamma-glutamate production in gamma-PGA-producing Bacillus subtilis.	Kada S, Nanamiya H, Kawamura F, Horinouchi S.	FEMS Microbiol Lett	10.1016/j.femsle.2004.05.028	2004
	Mechanism of bacterial gene rearrangement: SprA-catalyzed precise DNA recombination and its directionality control by SprB ensure the gene rearrangement and stable expression of spsM during sporulation in Bacillus subtilis.	Abe K, Takamatsu T, Sato T.	Nucleic Acids Res	10.1093/nar/gkx466	2017
Metabolism	Crystal structure of the thioesterification conformation of Bacillus subtilis o-succinylbenzoyl-CoA synthetase reveals a distinct substrate-binding mode.	Chen Y, Li TL, Lin X, Li X, Li XD, Guo Z.	J Biol Chem	10.1074/jbc.m117.790410	2017
	Endophytic Akanthomyces sp. LN303 from Edelweiss Produces Emestrin and Two New 2-Hydroxy-4 Pyridone Alkaloids.	Oberhofer M, Wackerlig J, Zehl M, Buyuk H, Cao JJ, Prado-Roller A, Urban E, Zotchev SB.	ACS Omega	10.1021/acsomega.0c05472	2021
	Structure of the Bacillus subtilis 70S ribosome reveals the basis for species-specific stalling.	Sohmen D, Chiba S, Shimokawa-Chiba N, Innis CA, Berninghausen O, Beckmann R, Ito K, Wilson DN.	Nat Commun	10.1038/ncomms7941	2015
Enzymology	A novel glycoside hydrolase family 105: the structure of family 105 unsaturated rhamnogalacturonyl hydrolase complexed with a disaccharide in comparison with family 88 enzyme complexed with the disaccharide.	Itoh T, Ochiai A, Mikami B, Hashimoto W, Murata K.	J Mol Biol	10.1016/j.jmb.2006.04.047	2006
	A Novel Gene Therapy Approach for GSD III Using an AAV Vector Encoding a Bacterial Glycogen Debranching Enzyme.	Lim JA, Choi SJ, Gao F, Kishnani PS, Sun B.	Mol Ther Methods Clin Dev	10.1016/j.omtm.2020.05.034	2020
Pathogenicity	Alanylated lipoteichoic acid primer in Bacillus subtilis.	Luo Y.	F1000Res	10.12688/f1000research.8007.2	2016
Metabolism	Evolution of the SpoIISABC Toxin-Antitoxin-Antitoxin System in Bacilli.	Gabrisko M, Barak I.	Toxins (Basel)	10.3390/toxins8060180	2016
	A mobile genetic element profoundly increases heat resistance of bacterial spores.	Berendsen EM, Boekhorst J, Kuipers OP, Wells-Bennik MH.	ISME J	10.1038/ismej.2016.59	2016
Enzymology	Successful conversion of the Bacillus subtilis BirA Group II biotin protein ligase into a Group I ligase.	Henke SK, Cronan JE.	PLoS One	10.1371/journal.pone.0096757	2014
Metabolism	Undecaprenyl pyrophosphate involvement in susceptibility of Bacillus subtilis to rare earth elements.	Inaoka T, Ochi K.	J Bacteriol	10.1128/jb.01147-12	2012
	Structural insights into stressosome assembly.	Kwon E, Pathak D, Kim HU, Dahal P, Ha SC, Lee SS, Jeong H, Jeoung D, Chang HW, Jung HS, Kim DY.	IUCrJ	10.1107/s205225251900945x	2019
Enzymology	Crystal structure of the Bacillus subtilis phosphodiesterase PhoD reveals an iron and calcium-containing active site.	Rodriguez F, Lillington J, Johnson S, Timmel CR, Lea SM, Berks BC.	J Biol Chem	10.1074/jbc.m114.604892	2014
Proteome	Factors that mediate and prevent degradation of the inactive and unstable GudB protein in Bacillus subtilis.	Stannek L, Gunka K, Care RA, Gerth U, Commichau FM.	Front Microbiol	10.3389/fmicb.2014.00758	2014
	A large-scale metagenomic survey dataset of the post-weaning piglet gut lumen.	Gaio D, DeMaere MZ, Anantanawat K, Eamens GJ, Liu M, Zingali T, Falconer L, Chapman TA, Djordjevic SP, Darling AE.	Gigascience	10.1093/gigascience/giab039	2021
	Density of founder cells affects spatial pattern formation and cooperation in Bacillus subtilis biofilms.	van Gestel J, Weissing FJ, Kuipers OP, Kovacs AT.	ISME J	10.1038/ismej.2014.52	2014
Metabolism	Display of Bombyx mori alcohol dehydrogenases on the Bacillus subtilis spore surface to enhance enzymatic activity under adverse conditions.	Wang N, Chang C, Yao Q, Li G, Qin L, Chen L, Chen K.	PLoS One	10.1371/journal.pone.0021454	2011
	Aerospace medicine in China: advancements and perspectives.	Wang A, Yang J, Tang S, Cui Y, Zhao J, Wang J, Li X, Zhao Y, Wang G, Du J.	NPJ Microgravity	10.1038/s41526-024-00453-w	2024
Enzymology	Discovery of a new family of relaxases in Firmicutes bacteria.	Ramachandran G, Miguel-Arribas A, Abia D, Singh PK, Crespo I, Gago-Cordoba C, Hao JA, Luque-Ortega JR, Alfonso C, Wu LJ, Boer DR, Meijer WJ.	PLoS Genet	10.1371/journal.pgen.1006586	2017
	Relevance of GC content to the conservation of DNA polymerase III/mismatch repair system in Gram-positive bacteria.	Akashi M, Yoshikawa H.	Front Microbiol	10.3389/fmicb.2013.00266	2013
	NRPquest: Coupling Mass Spectrometry and Genome Mining for Nonribosomal Peptide Discovery.	Mohimani H, Liu WT, Kersten RD, Moore BS, Dorrestein PC, Pevzner PA.	J Nat Prod	10.1021/np500370c	2014
Metabolism	Improved production of secreted heterologous enzyme in Bacillus subtilis strain MGB874 via modification of glutamate metabolism and growth conditions.	Manabe K, Kageyama Y, Morimoto T, Shimizu E, Takahashi H, Kanaya S, Ara K, Ozaki K, Ogasawara N.	Microb Cell Fact	10.1186/1475-2859-12-18	2013
	Synergistic effects of probiotic Leuconostoc mesenteroides and Bacillus subtilis in malted ragi (Eleucine corocana) food for antagonistic activity against V. cholerae and other beneficial properties.	VidyaLaxme B, Rovetto A, Grau R, Agrawal R.	J Food Sci Technol	10.1007/s13197-012-0834-5	2014
Metabolism	The use of Prevotella bryantii 3C5 for modulation of the ruminal environment in an ovine model.	Fraga M, Fernandez S, Perelmuter K, Pomies N, Cajarville C, Zunino P.	Braz J Microbiol	10.1016/j.bjm.2018.07.004	2018
	Molecular Pathways and Roles for Vitamin K2-7 as a Health-Beneficial Nutraceutical: Challenges and Opportunities.	Jadhav N, Ajgaonkar S, Saha P, Gurav P, Pandey A, Basudkar V, Gada Y, Panda S, Jadhav S, Mehta D, Nair S.	Front Pharmacol	10.3389/fphar.2022.896920	2022
Enzymology	Structural and spectroscopic analyses of the sporulation killing factor biosynthetic enzyme SkfB, a bacterial AdoMet radical sactisynthase.	Grell TAJ, Kincannon WM, Bruender NA, Blaesi EJ, Krebs C, Bandarian V, Drennan CL.	J Biol Chem	10.1074/jbc.ra118.005369	2018
Metabolism	Production of high-molecular-weight ribonuclease Bsn from the recombinant strain of Bacillus subtilis.	Kharitonova MA, Znamenskaya LV, Leshchinskaya IB.	Med Sci Monit		2003
	The first structure in a family of peptidase inhibitors reveals an unusual Ig-like fold.	Rigden DJ, Xu Q, Chang Y, Eberhardt RY, Finn RD, Rawlings ND.	F1000Res	10.12688/f1000research.2-154.v2	2013
Metabolism	Alanine Tails Signal Proteolysis in Bacterial Ribosome-Associated Quality Control.	Lytvynenko I, Paternoga H, Thrun A, Balke A, Muller TA, Chiang CH, Nagler K, Tsaprailis G, Anders S, Bischofs I, Maupin-Furlow JA, Spahn CMT, Joazeiro CAP.	Cell	10.1016/j.cell.2019.05.002	2019
	Antibacterial activity and mechanism of action of a thiophenyl substituted pyrimidine derivative.	Fang Z, Li Y, Zheng Y, Li X, Lu YJ, Yan SC, Wong WL, Chan KF, Wong KY, Sun N.	RSC Adv	10.1039/c9ra01001g	2019
	The Comparative Evaluation of Fermented and Non-fermented Soybean Extract on Antioxidation and Whitening.	Chae GY, Ha BJ.	Toxicol Res	10.5487/tr.2011.27.4.205	2011
	Bacillus subtilis natto: a non-toxic source of poly-gamma-glutamic acid that could be used as a cryoprotectant for probiotic bacteria.	Bhat AR, Irorere VU, Bartlett T, Hill D, Kedia G, Morris MR, Charalampopoulos D, Radecka I.	AMB Express	10.1186/2191-0855-3-36	2013
Enzymology	Electrostatic Energetics of Bacillus subtilis Ribonuclease P Protein Determined by Nuclear Magnetic Resonance-Based Histidine pKa Measurements.	Mosley PL, Daniels KG, Oas TG.	Biochemistry	10.1021/acs.biochem.5b00138	2015
Pathogenicity	Elements in the LftR Repressor Operator Interface Contributing to Regulation of Aurantimycin Resistance in Listeria monocytogenes.	Hauf S, Engelgeh T, Halbedel S.	J Bacteriol	10.1128/jb.00503-20	2021
	Cloning and Expression of Randomly Mutated Bacillus subtilis alpha-Amylase Genes in HB101.	Rabbani M, Mirmohammad Sadeghi H, Moazen F, Rahimi M, Salehi G.	Biotechnol Res Int	10.4061/2011/305956	2011
	Lactate oxidase/catalase-displaying nanoparticles efficiently consume lactate in the tumor microenvironment to effectively suppress tumor growth.	Choi H, Yeo M, Kang Y, Kim HJ, Park SG, Jang E, Park SH, Kim E, Kang S.	J Nanobiotechnology	10.1186/s12951-022-01762-6	2023
Enzymology	alpha-Galacturonidase(s): a new class of Family 4 glycoside hydrolases with strict specificity and a unique CHEV active site motif.	Thompson J, Pikis A, Rich J, Hall BG, Withers SG.	FEBS Lett	10.1016/j.febslet.2013.02.004	2013
	Structure-Activity Relationship of Flavin Analogues That Target the Flavin Mononucleotide Riboswitch.	Vicens Q, Mondragon E, Reyes FE, Coish P, Aristoff P, Berman J, Kaur H, Kells KW, Wickens P, Wilson J, Gadwood RC, Schostarez HJ, Suto RK, Blount KF, Batey RT.	ACS Chem Biol	10.1021/acschembio.8b00533	2018
Enzymology	Quantitative phosphoproteome analysis of Bacillus subtilis reveals novel substrates of the kinase PrkC and phosphatase PrpC.	Ravikumar V, Shi L, Krug K, Derouiche A, Jers C, Cousin C, Kobir A, Mijakovic I, Macek B.	Mol Cell Proteomics	10.1074/mcp.m113.035949	2014
Enzymology	Molecular cloning, overexpression, purification, crystallization and preliminary X-ray diffraction analysis of a purine nucleoside phosphorylase from Bacillus subtilis strain 168.	Martins NH, Meza AN, Santos CR, de Giuseppe PO, Murakami MT.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309111010414	2011
	Induction of Plasmid Conjugation in Bacillus subtilis Is Bistable and Driven by a Direct Interaction of a Rap/Phr Quorum-sensing System with a Master Repressor.	Rosch TC, Graumann PL.	J Biol Chem	10.1074/jbc.m115.664110	2015
	A dual protein expression system in Bacillus subtilis.	Chan AY, Chan MM, Lo HM, Leung YC, Lim BL.	Protein Expr Purif	10.1016/s1046-5928(02)00552-1	2002
Metabolism	Induction of L-form-like cell shape change of Bacillus subtilis under microculture conditions.	Shingaki R, Kasahara Y, Iwano M, Kuwano M, Takatsuka T, Inoue T, Kokeguchi S, Fukui K.	Microbiology (Reading)	10.1099/mic.0.26259-0	2003
	Profiling and tandem mass spectrometry analysis of aminoacylated phospholipids in Bacillus subtilis .	Atila M, Luo Y.	F1000Res	10.12688/f1000research.7842.2	2016
Metabolism	Allantoin transport protein, PucI, from Bacillus subtilis: evolutionary relationships, amplified expression, activity and specificity.	Ma P, Patching SG, Ivanova E, Baldwin JM, Sharples D, Baldwin SA, Henderson PJF.	Microbiology (Reading)	10.1099/mic.0.000266	2016
Metabolism	Changes in the Acetylome and Succinylome of Bacillus subtilis in Response to Carbon Source.	Kosono S, Tamura M, Suzuki S, Kawamura Y, Yoshida A, Nishiyama M, Yoshida M.	PLoS One	10.1371/journal.pone.0131169	2015
Metabolism	Changes in the material characteristics of maize straw during the pretreatment process of methanation.	Feng Y, Zhao X, Guo Y, Yang G, Xi J, Ren G.	J Biomed Biotechnol	10.1155/2012/325426	2012
	Transcriptome analysis documents induced competence of Bacillus subtilis during nitrogen limiting conditions.	Jarmer H, Berka R, Knudsen S, Saxild HH.	FEMS Microbiol Lett	10.1111/j.1574-6968.2002.tb11009.x	2002
	Synthetic photosynthetic consortia define interactions leading to robustness and photoproduction.	Hays SG, Yan LLW, Silver PA, Ducat DC.	J Biol Eng	10.1186/s13036-017-0048-5	2017
Metabolism	Activation of Antibiotic Production in Bacillus spp. by Cumulative Drug Resistance Mutations.	Tojo S, Tanaka Y, Ochi K.	Antimicrob Agents Chemother	10.1128/aac.01932-15	2015
	The Great Five-an artificial bacterial consortium with antagonistic activity towards Pectobacterium spp. and Dickeya spp.: formulation, shelf life, and the ability to prevent soft rot of potato in storage.	Maciag T, Krzyzanowska DM, Jafra S, Siwinska J, Czajkowski R.	Appl Microbiol Biotechnol	10.1007/s00253-020-10550-x	2020
	The Use of Selected Bacteria and Yeasts to Control Vibrio spp. in Live Food.	Sahandi J, Sorgeloos P, Xiao H, Wang X, Qi Z, Zheng Y, Tang X.	Antibiotics (Basel)	10.3390/antibiotics8030095	2019
Metabolism	In-Culture Cross-Linking of Bacterial Cells Reveals Large-Scale Dynamic Protein-Protein Interactions at the Peptide Level.	de Jong L, de Koning EA, Roseboom W, Buncherd H, Wanner MJ, Dapic I, Jansen PJ, van Maarseveen JH, Corthals GL, Lewis PJ, Hamoen LW, de Koster CG.	J Proteome Res	10.1021/acs.jproteome.7b00068	2017
	C4 Bacterial Volatiles Improve Plant Health.	Silva Dias BH, Jung SH, Castro Oliveira JV, Ryu CM.	Pathogens	10.3390/pathogens10060682	2021
Metabolism	Decoding Biomass-Sensing Regulons of Clostridium thermocellum Alternative Sigma-I Factors in a Heterologous Bacillus subtilis Host System.	Munoz-Gutierrez I, Ortiz de Ora L, Rozman Grinberg I, Garty Y, Bayer EA, Shoham Y, Lamed R, Borovok I.	PLoS One	10.1371/journal.pone.0146316	2016
	Preliminary crystallographic studies of the regulatory domain of response regulator YycF from an essential two-component signal transduction system.	Zhao H, Heroux A, Sequeira RD, Tang L.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309109022696	2009
Metabolism	Engineering the xylan utilization system in Bacillus subtilis for production of acidic Xylooligosaccharides.	Rhee MS, Wei L, Sawhney N, Rice JD, St John FJ, Hurlbert JC, Preston JF.	Appl Environ Microbiol	10.1128/aem.03246-13	2014
Metabolism	Primase is required for helicase activity and helicase alters the specificity of primase in the enteropathogen Clostridium difficile.	van Eijk E, Paschalis V, Green M, Friggen AH, Larson MA, Spriggs K, Briggs GS, Soultanas P, Smits WK.	Open Biol	10.1098/rsob.160272	2016
	The antithrombotic and fibrinolytic effect of natto in hypercholesterolemia rats.	Park KJ, Kang JI, Kim TS, Yeo IH.	Prev Nutr Food Sci	10.3746/pnf.2012.17.1.078	2012
Enzymology	Characterization of a Mannose-6-Phosphate Isomerase from Bacillus amyloliquefaciens and Its Application in Fructose-6-Phosphate Production.	Sigdel S, Singh R, Kim TS, Li J, Kim SY, Kim IW, Jung WS, Pan CH, Kang YC, Lee JK.	PLoS One	10.1371/journal.pone.0131585	2015
Pathogenicity	Genomic-, phenotypic-, and toxicity-based safety assessment and probiotic potency of Bacillus coagulans IDCC 1201 isolated from green malt.	Bang WY, Ban OH, Lee BS, Oh S, Park C, Park MK, Jung SK, Yang J, Yang J, Jung YH.	J Ind Microbiol Biotechnol	10.1093/jimb/kuab026	2021
Pathogenicity	Antimicrobial Peptide Resistance Genes in the Plant Pathogen Dickeya dadantii.	Pandin C, Caroff M, Condemine G.	Appl Environ Microbiol	10.1128/aem.01757-16	2016
Metabolism	Specificity of RppH-dependent RNA degradation in Bacillus subtilis.	Hsieh PK, Richards J, Liu Q, Belasco JG.	Proc Natl Acad Sci U S A	10.1073/pnas.1222670110	2013
Metabolism	Transposon Mutagenesis in Chlamydia trachomatis Identifies CT339 as a ComEC Homolog Important for DNA Uptake and Lateral Gene Transfer.	LaBrie SD, Dimond ZE, Harrison KS, Baid S, Wickstrum J, Suchland RJ, Hefty PS.	mBio	10.1128/mbio.01343-19	2019
	Hyperphosphorylation of DegU cancels CcpA-dependent catabolite repression of rocG in Bacillus subtilis.	Tanaka K, Iwasaki K, Morimoto T, Matsuse T, Hasunuma T, Takenaka S, Chumsakul O, Ishikawa S, Ogasawara N, Yoshida K.	BMC Microbiol	10.1186/s12866-015-0373-0	2015
Metabolism	Inactivation of ribosomal protein genes in Bacillus subtilis reveals importance of each ribosomal protein for cell proliferation and cell differentiation.	Akanuma G, Nanamiya H, Natori Y, Yano K, Suzuki S, Omata S, Ishizuka M, Sekine Y, Kawamura F.	J Bacteriol	10.1128/jb.01544-12	2012
	Natto Bacillus contains a large amount of water-soluble vitamin K (Menaquinone-7)	Yanagisawa Y, Sumi H.	J Food Biochem	10.1111/j.1745-4514.2005.00016.x	2005
	Exploring the low-pressure growth limit: evolution of Bacillus subtilis in the laboratory to enhanced growth at 5 kilopascals.	Nicholson WL, Fajardo-Cavazos P, Fedenko J, Ortiz-Lugo JL, Rivas-Castillo A, Waters SM, Schuerger AC.	Appl Environ Microbiol	10.1128/aem.01126-10	2010
Enzymology	Global analysis of mRNA decay intermediates in Bacillus subtilis wild-type and polynucleotide phosphorylase-deletion strains.	Liu B, Deikus G, Bree A, Durand S, Kearns DB, Bechhofer DH.	Mol Microbiol	10.1111/mmi.12748	2014
Metabolism	AMDORAP: non-targeted metabolic profiling based on high-resolution LC-MS.	Takahashi H, Morimoto T, Ogasawara N, Kanaya S.	BMC Bioinformatics	10.1186/1471-2105-12-259	2011
	Effect of poly-gamma-glutamic acid on the stability of set yoghurts.	Yu H, Liu H, Wang L, Zhang Y, Tian H, Ma X.	J Food Sci Technol	10.1007/s13197-018-3404-7	2018
Transcriptome	Transcriptional Profiling of the Probiotic Escherichia coli Nissle 1917 Strain under Simulated Microgravity.	Yim J, Cho SW, Kim B, Park S, Han YH, Seo SW.	Int J Mol Sci	10.3390/ijms21082666	2020
Enzymology	Preparation, crystallization and preliminary X-ray analysis of protein YtlP from Bacillus subtilis.	Liu C, Li D, Hederstedt L, Li L, Liang YH, Su XD.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s174430910603199x	2006
Metabolism	Phage 29 phi protein p1 promotes replication by associating with the FtsZ ring of the divisome in Bacillus subtilis.	Ballesteros-Plaza D, Holguera I, Scheffers DJ, Salas M, Munoz-Espin D.	Proc Natl Acad Sci U S A	10.1073/pnas.1311524110	2013
	A genome-wide transcriptional profiling of sporulating Bacillus subtilis strain lacking PrpE protein phosphatase.	Iwanicki A, Hinc K, Ronowicz A, Piotrowski A, Woloszyk A, Obuchowski M.	Mol Genet Genomics	10.1007/s00438-013-0763-7	2013
	A tRNA modification with aminovaleramide facilitates AUA decoding in protein synthesis.	Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T.	Nat Chem Biol	10.1038/s41589-024-01726-x	2025
Pathogenicity	Role of Bacillus subtilis error prevention oxidized guanine system in counteracting hexavalent chromium-promoted oxidative DNA damage.	Santos-Escobar F, Gutierrez-Corona JF, Pedraza-Reyes M.	Appl Environ Microbiol	10.1128/aem.01665-14	2014
Pathogenicity	Purification and characterization of 3,3-dihydroxyazetidine from culture medium of Bacillus mesentericus and B. subtilis.	Ozone F, Inoue Y, Shiraishi A, Hamashima H, Masuda K, Shiojima K, Sasatsu M.	J Microbiol Methods	10.1016/s0167-7012(02)00022-2	2002
Metabolism	A Counterselectable Sucrose Sensitivity Marker Permits Efficient and Flexible Mutagenesis in Streptococcus agalactiae.	Hooven TA, Bonakdar M, Chamby AB, Ratner AJ.	Appl Environ Microbiol	10.1128/aem.03009-18	2019
Metabolism	Evolutionary analysis of polyproline motifs in Escherichia coli reveals their regulatory role in translation.	Qi F, Motz M, Jung K, Lassak J, Frishman D.	PLoS Comput Biol	10.1371/journal.pcbi.1005987	2018
	Engineering microbial consortia of Elizabethkingia meningoseptica and Escherichia coli strains for the biosynthesis of vitamin K2.	Yang Q, Zheng Z, Zhao G, Wang L, Wang H, Ding X, Jiang C, Li C, Ma G, Wang P.	Microb Cell Fact	10.1186/s12934-022-01768-7	2022
Metabolism	nhaG Na(+)/H(+) antiporter gene of Bacillus subtilis ATCC9372, which is missing in the complete genome sequence of strain 168, and properties of the antiporter.	Gouda T, Kuroda M, Hiramatsu T, Nozaki K, Kuroda T, Mizushima T, Tsuchiya T.	J Biochem	10.1093/oxfordjournals.jbchem.a003038	2001
Metabolism	Short-chain chromate ion transporter proteins from Bacillus subtilis confer chromate resistance in Escherichia coli.	Diaz-Magana A, Aguilar-Barajas E, Moreno-Sanchez R, Ramirez-Diaz MI, Riveros-Rosas H, Vargas E, Cervantes C.	J Bacteriol	10.1128/jb.00625-09	2009
Phylogeny	Phylogenetic analysis of Bacillus subtilis strains applicable to natto (fermented soybean) production.	Kubo Y, Rooney AP, Tsukakoshi Y, Nakagawa R, Hasegawa H, Kimura K.	Appl Environ Microbiol	10.1128/aem.00448-11	2011
Pathogenicity	Tomatidine Is a Lead Antibiotic Molecule That Targets Staphylococcus aureus ATP Synthase Subunit C.	Lamontagne Boulet M, Isabelle C, Guay I, Brouillette E, Langlois JP, Jacques PE, Rodrigue S, Brzezinski R, Beauregard PB, Bouarab K, Boyapelly K, Boudreault PL, Marsault E, Malouin F.	Antimicrob Agents Chemother	10.1128/aac.02197-17	2018
	Thrombus Degradation by Fibrinolytic Enzyme of Stenotrophomonas sp. Originated from Indonesian Soybean-Based Fermented Food on Wistar Rats.	Nailufar F, Tjandrawinata RR, Suhartono MT.	Adv Pharmacol Sci	10.1155/2016/4206908	2016
Metabolism	A combination of glycerol and manganese promotes biofilm formation in Bacillus subtilis via histidine kinase KinD signaling.	Shemesh M, Chai Y.	J Bacteriol	10.1128/jb.00028-13	2013
Metabolism	Condensin promotes the juxtaposition of DNA flanking its loading site in Bacillus subtilis.	Wang X, Le TB, Lajoie BR, Dekker J, Laub MT, Rudner DZ.	Genes Dev	10.1101/gad.265876.115	2015
	Optimisation of the fermentation media to enhance the production of the bioactive isomer of vitamin menaquinone-7.	Lal N, Seifan M, Berenjian A.	Bioprocess Biosyst Eng	10.1007/s00449-022-02752-6	2022
Enzymology	Bme585 I [5'-CCCGC(4/6)-3'], a new isoschizomer of restriction endonuclease Fau I, isolated from a strain of Bacillus mesentericus.	Davalieva K, Ziberovski J, Efremov GD.	Microbiol Res	10.1016/j.micres.2004.01.010	2004
Enzymology	Crystallographic characterization of a multidomain histidine protein kinase from an essential two-component regulatory system.	Zhao H, Tang L.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s174430910900668x	2009
Enzymology	The YmdB phosphodiesterase is a global regulator of late adaptive responses in Bacillus subtilis.	Diethmaier C, Newman JA, Kovacs AT, Kaever V, Herzberg C, Rodrigues C, Rodrigues C, Boonstra M, Kuipers OP, Lewis RJ, Stulke J.	J Bacteriol	10.1128/jb.00826-13	2014
Metabolism	The L17 ribosomal protein of Bacillus subtilis binds preferentially to curved DNA.	Zouine M, Beloin C, Ghelis C, Le Hegarat F.	Biochimie	10.1016/s0300-9084(00)00184-x	2000
Genetics	The loose evolutionary relationships between transcription factors and other gene products across prokaryotes.	del Grande M, Moreno-Hagelsieb G.	BMC Res Notes	10.1186/1756-0500-7-928	2014
	Structural insights into DNA recognition by AimR of the arbitrium communication system in the SPbeta phage.	Guan Z, Pei K, Wang J, Cui Y, Zhu X, Su X, Zhou Y, Zhang D, Tang C, Yin P, Liu Z, Zou T.	Cell Discov	10.1038/s41421-019-0101-2	2019
	Organization and evolution of the cotG and cotH genes of Bacillus subtilis.	Giglio R, Fani R, Isticato R, De Felice M, Ricca E, Baccigalupi L.	J Bacteriol	10.1128/jb.06121-11	2011
Metabolism	Subtilomycin: a new lantibiotic from Bacillus subtilis strain MMA7 isolated from the marine sponge Haliclona simulans.	Phelan RW, Barret M, Cotter PD, O'Connor PM, Chen R, Morrissey JP, Dobson AD, O'Gara F, Barbosa TM.	Mar Drugs	10.3390/md11061878	2013
Metabolism	The mthA mutation conferring low-level resistance to streptomycin enhances antibiotic production in Bacillus subtilis by increasing the S-adenosylmethionine pool size.	Tojo S, Kim JY, Tanaka Y, Inaoka T, Hiraga Y, Ochi K.	J Bacteriol	10.1128/jb.01441-13	2014
Enzymology	Preparation, crystallization and preliminary X-ray analysis of YjcG protein from Bacillus subtilis.	Li D, Chan C, Liang YH, Zheng X, Li L, Su XD.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309105011012	2005
	Ribosome collisions induce mRNA cleavage and ribosome rescue in bacteria.	Saito K, Kratzat H, Campbell A, Buschauer R, Burroughs AM, Berninghausen O, Aravind L, Green R, Beckmann R, Buskirk AR.	Nature	10.1038/s41586-022-04416-7	2022
Metabolism	Fatty-acid-displaced transcriptional repressor, a conserved regulator of cytochrome P450 102 transcription in Bacillus species.	Gustafsson MC, Palmer CN, Wolf CR, von Wachenfeldt C.	Arch Microbiol	10.1007/s002030100350	2001
Enzymology	Crystallization and crystallographic analysis of Bacillus subtilis xylanase C.	St John FJ, Godwin DK, Preston JF, Pozharski E, Hurlbert JC.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309109013098	2009
Transcriptome	Manganese Stress Adaptation Mechanisms of Bacillus safensis Strain ST7 From Mine Soil.	Ran X, Zhu Z, Long H, Tian Q, You L, Wu X, Liu Q, Huang S, Li S, Niu X, Wang J.	Front Microbiol	10.3389/fmicb.2021.758889	2021
Genetics	Autonomous Replication of the Conjugative Transposon Tn916.	Wright LD, Grossman AD.	J Bacteriol	10.1128/jb.00639-16	2016
Pathogenicity	Deciphering the conserved genetic loci implicated in plant disease control through comparative genomics of Bacillus amyloliquefaciens subsp. plantarum.	Hossain MJ, Ran C, Liu K, Ryu CM, Rasmussen-Ivey CR, Williams MA, Hassan MK, Choi SK, Jeong H, Newman M, Kloepper JW, Liles MR.	Front Plant Sci	10.3389/fpls.2015.00631	2015
	Utilizing Simple Biochemical Measurements to Predict Lifetime Output of Biocatalysts in Continuous Isothermal Processes.	Rogers TA, Bommarius AS.	Chem Eng Sci	10.1016/j.ces.2009.12.005	2010
Enzymology	Structural Basis for the ATP-dependent Configuration of Adenylation Active Site in Bacillus subtilis o-Succinylbenzoyl-CoA Synthetase.	Chen Y, Sun Y, Song H, Guo Z.	J Biol Chem	10.1074/jbc.m115.676304	2015
Enzymology	Potent fibrinolytic enzyme from a mutant of Bacillus subtilis IMR-NK1.	Chang CT, Fan MH, Kuo FC, Sung HY.	J Agric Food Chem	10.1021/jf000020k	2000
	Analysis of genomic rearrangements, horizontal gene transfer and role of plasmids in the evolution of industrial important Thermus species.	Kumwenda B, Litthauer D, Reva O.	BMC Genomics	10.1186/1471-2164-15-813	2014
	Growth of Serratia liquefaciens under 7 mbar, 0°C, and CO2-enriched anoxic atmospheres.	Schuerger AC, Ulrich R, Berry BJ, Nicholson WL.	Astrobiology	10.1089/ast.2011.0811	2013
Metabolism	Discovery of genes required for lipoteichoic acid glycosylation predicts two distinct mechanisms for wall teichoic acid glycosylation.	Rismondo J, Percy MG, Grundling A.	J Biol Chem	10.1074/jbc.ra117.001614	2018
Pathogenicity	Effect of a multispecies probiotic on inflammatory markers in critically ill patients: A randomized, double-blind, placebo-controlled trial.	Sanaie S, Ebrahimi-Mameghani M, Hamishehkar H, Mojtahedzadeh M, Mahmoodpoor A.	J Res Med Sci		2014
	Small regulatory RNA-induced growth rate heterogeneity of Bacillus subtilis.	Mars RA, Nicolas P, Ciccolini M, Reilman E, Reder A, Schaffer M, Mader U, Volker U, van Dijl JM, Denham EL.	PLoS Genet	10.1371/journal.pgen.1005046	2015
Pathogenicity	New role of the disulfide stress effector YjbH in beta-lactam susceptibility of Staphylococcus aureus.	Gohring N, Fedtke I, Xia G, Jorge AM, Pinho MG, Bertsche U, Peschel A.	Antimicrob Agents Chemother	10.1128/aac.00286-11	2011
	A novel member of the subtilisin-like protease family from Bacillus subtilis.	Valbuzzi A, Ferrari E, Albertini AM.	Microbiology (Reading)	10.1099/00221287-145-11-3121	1999
Metabolism	Regulation of the rhaEWRBMA Operon Involved in l-Rhamnose Catabolism through Two Transcriptional Factors, RhaR and CcpA, in Bacillus subtilis.	Hirooka K, Kodoi Y, Satomura T, Fujita Y.	J Bacteriol	10.1128/jb.00856-15	2015
	Probiotics as a Coadjuvant Factor in Active or Quiescent Inflammatory Bowel Disease of Adults-A Meta-Analytical Study.	Pabon-Carrasco M, Ramirez-Baena L, Vilar-Palomo S, Castro-Mendez A, Martos-Garcia R, Rodriguez-Gallego I.	Nutrients	10.3390/nu12092628	2020
	Secretory production of a beta-mannanase and a chitosanase using a Lactobacillus plantarum expression system.	Sak-Ubol S, Namvijitr P, Pechsrichuang P, Haltrich D, Nguyen TH, Mathiesen G, Eijsink VG, Yamabhai M.	Microb Cell Fact	10.1186/s12934-016-0481-z	2016
	A case of radial keratoneuritis in non-Acanthamoeba keratitis.	Mutoh T, Matsumoto Y, Chikuda M.	Clin Ophthalmol	10.2147/opth.s36192	2012
Enzymology	Crystallization and preliminary X-ray analysis of the rhamnogalacturonan lyase YesW from Bacillus subtilis strain 168, a member of polysaccharide lyase family 11.	Ochiai A, Yamasaki M, Itoh T, Mikami B, Hashimoto W, Murata K.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309106011894	2006
Metabolism	New stable anchor protein and peptide linker suitable for successful spore surface display in B. subtilis.	Hinc K, Iwanicki A, Obuchowski M.	Microb Cell Fact	10.1186/1475-2859-12-22	2013
	The SHOCT domain: a widespread domain under-represented in model organisms.	Eberhardt RY, Bartholdson SJ, Punta M, Bateman A.	PLoS One	10.1371/journal.pone.0057848	2013
Metabolism	Amino acid residues in the GerAB protein important in the function and assembly of the alanine spore germination receptor of Bacillus subtilis 168.	Cooper GR, Moir A.	J Bacteriol	10.1128/jb.01397-10	2011
Metabolism	Defect in the formation of 70S ribosomes caused by lack of ribosomal protein L34 can be suppressed by magnesium.	Akanuma G, Kobayashi A, Suzuki S, Kawamura F, Shiwa Y, Watanabe S, Yoshikawa H, Hanai R, Ishizuka M.	J Bacteriol	10.1128/jb.01896-14	2014
	Identification of Bacteria in Two Food Waste Black Soldier Fly Larvae Rearing Residues.	Gold M, von Allmen F, Zurbrugg C, Zhang J, Mathys A.	Front Microbiol	10.3389/fmicb.2020.582867	2020
	The Clostridium difficile cpr locus is regulated by a noncontiguous two-component system in response to type A and B lantibiotics.	Suarez JM, Edwards AN, McBride SM.	J Bacteriol	10.1128/jb.00166-13	2013
	Developmentally-regulated excision of the SPbeta prophage reconstitutes a gene required for spore envelope maturation in Bacillus subtilis.	Abe K, Kawano Y, Iwamoto K, Arai K, Maruyama Y, Eichenberger P, Sato T.	PLoS Genet	10.1371/journal.pgen.1004636	2014
Metabolism	A poly-gamma-glutamate synthetic system of Bacillus subtilis IFO 3336: gene cloning and biochemical analysis of poly-gamma-glutamate produced by Escherichia coli clone cells.	Ashiuchi M, Soda K, Misono H.	Biochem Biophys Res Commun	10.1006/bbrc.1999.1298	1999
	Polar or Charged Residues Located in Four Highly Conserved Motifs Play a Vital Role in the Function or pH Response of a UPF0118 Family Na⁺(Li⁺)/H⁺ Antiporter.	Wang L, Zou Q, Yan M, Wang Y, Guo S, Zhang R, Song Y, Li X, Chen H, Shao L, Meng L, Jiang J.	Front Microbiol	10.3389/fmicb.2020.00841	2020
	The LIKE system, a novel protein expression toolbox for Bacillus subtilis based on the liaI promoter.	Toymentseva AA, Schrecke K, Sharipova MR, Mascher T.	Microb Cell Fact	10.1186/1475-2859-11-143	2012
Enzymology	Crystallization and preliminary X-ray crystallographic analysis of enoyl-ACP reductase III (FabL) from Bacillus subtilis.	Kim KH, Park JK, Ha BH, Moon JH, Kim EE.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309107008469	2007
	Chalcones, stilbenes and ketones have anti-infective properties via inhibition of bacterial drug-efflux and consequential synergism with antimicrobial agents.	Hellewell L, Bhakta S.	Access Microbiol	10.1099/acmi.0.000105	2020
	Identification of a Novel Nematotoxic Protein by Challenging the Model Mushroom Coprinopsis cinerea with a Fungivorous Nematode.	Plaza DF, Schmieder SS, Lipzen A, Lindquist E, Kunzler M.	G3 (Bethesda)	10.1534/g3.115.023069	2015
Metabolism	Secondary Metabolism and Interspecific Competition Affect Accumulation of Spontaneous Mutants in the GacS-GacA Regulatory System in Pseudomonas protegens.	Yan Q, Lopes LD, Shaffer BT, Kidarsa TA, Vining O, Philmus B, Song C, Stockwell VO, Raaijmakers JM, McPhail KL, Andreote FD, Chang JH, Loper JE.	mBio	10.1128/mbio.01845-17	2018
	A Structural, Functional, and Computational Analysis of BshA, the First Enzyme in the Bacillithiol Biosynthesis Pathway.	Winchell KR, Egeler PW, VanDuinen AJ, Jackson LB, Karpen ME, Cook PD.	Biochemistry	10.1021/acs.biochem.6b00472	2016
	Phytases from Enterobacter and Serratia species with desirable characteristics for food and feed applications.	Kalsi HK, Singh R, Dhaliwal HS, Kumar V.	3 Biotech	10.1007/s13205-016-0378-x	2016
Transcriptome	Whole transcriptomic analysis of the plant-beneficial rhizobacterium Bacillus amyloliquefaciens SQR9 during enhanced biofilm formation regulated by maize root exudates.	Zhang N, Yang D, Wang D, Miao Y, Shao J, Zhou X, Xu Z, Li Q, Feng H, Li S, Shen Q, Zhang R.	BMC Genomics	10.1186/s12864-015-1825-5	2015
	Crystallization and preliminary X-ray diffraction analysis of the Bacillus subtilis replication termination protein in complex with the 37-base-pair TerI-binding site.	Vivian JP, Porter C, Wilce JA, Wilce MC.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309106039108	2006
	Inhibitors of bacterial tubulin target bacterial membranes in vivo.	Foss MH, Eun YJ, Grove CI, Pauw DA, Sorto NA, Rensvold JW, Pagliarini DJ, Shaw JT, Weibel DB.	Medchemcomm	10.1039/c2md20127e	2013
	Mechanisms Used by Probiotics to Confer Pathogen Resistance to Teleost Fish.	Simon R, Docando F, Nunez-Ortiz N, Tafalla C, Diaz-Rosales P.	Front Immunol	10.3389/fimmu.2021.653025	2021
Metabolism	ABCF ATPases Involved in Protein Synthesis, Ribosome Assembly and Antibiotic Resistance: Structural and Functional Diversification across the Tree of Life.	Murina V, Kasari M, Takada H, Hinnu M, Saha CK, Grimshaw JW, Seki T, Reith M, Putrins M, Tenson T, Strahl H, Hauryliuk V, Atkinson GC.	J Mol Biol	10.1016/j.jmb.2018.12.013	2019
Enzymology	A cytochrome bb'-type quinol oxidase in Bacillus subtilis strain 168.	Azarkina N, Siletsky S, Borisov V, von Wachenfeldt C, Hederstedt L, Konstantinov AA.	J Biol Chem	10.1074/jbc.274.46.32810	1999
Metabolism	Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch-degrader Ruminococcus bromii.	Mukhopadhya I, Morais S, Laverde-Gomez J, Sheridan PO, Walker AW, Kelly W, Klieve AV, Ouwerkerk D, Duncan SH, Louis P, Koropatkin N, Cockburn D, Kibler R, Cooper PJ, Sandoval C, Crost E, Juge N, Bayer EA, Flint HJ.	Environ Microbiol	10.1111/1462-2920.14000	2018
Enzymology	Atomic model of a cell-wall cross-linking enzyme in complex with an intact bacterial peptidoglycan.	Schanda P, Triboulet S, Laguri C, Bougault CM, Ayala I, Callon M, Arthur M, Simorre JP.	J Am Chem Soc	10.1021/ja5105987	2014
	KinD is a checkpoint protein linking spore formation to extracellular-matrix production in Bacillus subtilis biofilms.	Aguilar C, Vlamakis H, Guzman A, Losick R, Kolter R.	mBio	10.1128/mbio.00035-10	2010
Metabolism	The Staphylococcus aureus group II biotin protein ligase BirA is an effective regulator of biotin operon transcription and requires the DNA binding domain for full enzymatic activity.	Henke SK, Cronan JE.	Mol Microbiol	10.1111/mmi.13470	2016
	REPARATION: ribosome profiling assisted (re-)annotation of bacterial genomes.	Ndah E, Jonckheere V, Giess A, Valen E, Menschaert G, Van Damme P.	Nucleic Acids Res	10.1093/nar/gkx758	2017
	Extracellular DNA release by undomesticated Bacillus subtilis is regulated by early competence.	Zafra O, Lamprecht-Grandio M, de Figueras CG, Gonzalez-Pastor JE.	PLoS One	10.1371/journal.pone.0048716	2012
Genetics	A novel Bacillus natto plasmid pLS32 capable of replication in Bacillus subtilis.	Tanaka T, Ogura M.	FEBS Lett	10.1016/s0014-5793(98)00015-5	1998
	Transcription activity of individual rrn operons in Bacillus subtilis mutants deficient in (p)ppGpp synthetase genes, relA, yjbM, and ywaC.	Natori Y, Tagami K, Murakami K, Yoshida S, Tanigawa O, Moh Y, Masuda K, Wada T, Suzuki S, Nanamiya H, Tozawa Y, Kawamura F.	J Bacteriol	10.1128/jb.00263-09	2009
Metabolism	High external pH enables more efficient secretion of alkaline alpha-amylase AmyK38 by Bacillus subtilis.	Manabe K, Kageyama Y, Tohata M, Ara K, Ozaki K, Ogasawara N.	Microb Cell Fact	10.1186/1475-2859-11-74	2012
	Mobility of the native Bacillus subtilis conjugative plasmid pLS20 is regulated by intercellular signaling.	Singh PK, Ramachandran G, Ramos-Ruiz R, Peiro-Pastor R, Abia D, Wu LJ, Meijer WJ.	PLoS Genet	10.1371/journal.pgen.1003892	2013
Metabolism	Adaptation of the wine bacterium Oenococcus oeni to ethanol stress: role of the small heat shock protein Lo18 in membrane integrity.	Maitre M, Weidmann S, Dubois-Brissonnet F, David V, Coves J, Guzzo J.	Appl Environ Microbiol	10.1128/aem.04178-13	2014
Phylogeny	Bayesian identification of bacterial strains from sequencing data.	Sankar A, Malone B, Bayliss SC, Pascoe B, Meric G, Hitchings MD, Sheppard SK, Feil EJ, Corander J, Honkela A.	Microb Genom	10.1099/mgen.0.000075	2016
Metabolism	Constitutive high level expression of an endoxylanase gene from the newly isolated Bacillus subtilis AQ1 in Escherichia coli.	Helianti I, Nurhayati N, Ulfah M, Wahyuntari B, Setyahadi S.	J Biomed Biotechnol	10.1155/2010/980567	2010
Metabolism	Characterization of the Functional Variance in MbtH-like Protein Interactions with a Nonribosomal Peptide Synthetase.	Schomer RA, Thomas MG.	Biochemistry	10.1021/acs.biochem.7b00517	2017
	Association of RNAs with Bacillus subtilis Hfq.	Dambach M, Irnov I, Winkler WC.	PLoS One	10.1371/journal.pone.0055156	2013
Enzymology	Molecular cloning and the biochemical characterization of two novel phytases from B. subtilis 168 and B. licheniformis.	Tye AJ, Siu FK, Leung TY, Lim BL.	Appl Microbiol Biotechnol	10.1007/s00253-002-1033-5	2002
Metabolism	YjbH-enhanced proteolysis of Spx by ClpXP in Bacillus subtilis is inhibited by the small protein YirB (YuzO).	Kommineni S, Garg SK, Chan CM, Zuber P.	J Bacteriol	10.1128/jb.01350-10	2011
	Utilization of low-pressure plasma to inactivate bacterial spores on stainless steel screws.	Stapelmann K, Fiebrandt M, Raguse M, Awakowicz P, Reitz G, Moeller R.	Astrobiology	10.1089/ast.2012.0949	2013
Metabolism	Surfactin-induced apoptosis through ROS-ERS-Ca2+-ERK pathways in HepG2 cells.	Wang CL, Liu C, Niu LL, Wang LR, Hou LH, Cao XH.	Cell Biochem Biophys	10.1007/s12013-013-9676-7	2013
Genetics	Expanded Phylogenetic Diversity and Metabolic Flexibility of Mercury-Methylating Microorganisms.	McDaniel EA, Peterson BD, Stevens SLR, Tran PQ, Anantharaman K, McMahon KD.	mSystems	10.1128/msystems.00299-20	2020
Metabolism	Biosynthesis of aliphatic polyketides by type III polyketide synthase and methyltransferase in Bacillus subtilis.	Nakano C, Ozawa H, Akanuma G, Funa N, Horinouchi S.	J Bacteriol	10.1128/jb.00407-09	2009
Proteome	Lipid Requirements for the Enzymatic Activity of MraY Translocases and in Vitro Reconstitution of the Lipid II Synthesis Pathway.	Henrich E, Ma Y, Engels I, Munch D, Otten C, Schneider T, Henrichfreise B, Sahl HG, Dotsch V, Bernhard F.	J Biol Chem	10.1074/jbc.m115.664292	2016
Enzymology	Genes encoding thymidylate synthases A and B in the genus Bacillus are members of two distinct families.	Tam NH, Borriss R.	Mol Gen Genet	10.1007/pl00008625	1998
	Expression of a small (p)ppGpp synthetase, YwaC, in the (p)ppGpp(0) mutant of Bacillus subtilis triggers YvyD-dependent dimerization of ribosome.	Tagami K, Nanamiya H, Kazo Y, Maehashi M, Suzuki S, Namba E, Hoshiya M, Hanai R, Tozawa Y, Morimoto T, Ogasawara N, Kageyama Y, Ara K, Ozaki K, Yoshida M, Kuroiwa H, Kuroiwa T, Ohashi Y, Kawamura F.	Microbiologyopen	10.1002/mbo3.16	2012
	A 35.7 kb DNA fragment from the Bacillus subtilis chromosome containing a putative 12.3 kb operon involved in hexuronate catabolism and a perfectly symmetrical hypothetical catabolite-responsive element.	Rivolta C, Soldo B, Lazarevic V, Joris B, Mauel C, Karamat D.	Microbiology (Reading)	10.1099/00221287-144-4-877	1998
Genetics	Sequencing and functional analysis of the genome of Bacillus subtilis strain 168.	Harwood CR, Wipat A.	FEBS Lett	10.1016/0014-5793(96)00524-8	1996
Enzymology	Structural and biochemical analyses of YvgN and YtbE from Bacillus subtilis.	Lei J, Zhou YF, Li LF, Su XD.	Protein Sci	10.1002/pro.178	2009
Metabolism	A Secreted Bacterial Peptidylarginine Deiminase Can Neutralize Human Innate Immune Defenses.	Stobernack T, du Teil Espina M, Mulder LM, Palma Medina LM, Piebenga DR, Gabarrini G, Zhao X, Janssen KMJ, Hulzebos J, Brouwer E, Sura T, Becher D, van Winkelhoff AJ, Gotz F, Otto A, Westra J, van Dijl JM.	mBio	10.1128/mbio.01704-18	2018
Genetics	Impact of metal oxide nanoparticles on in vitro DNA amplification.	Gao CH, Mortimer M, Zhang M, Holden PA, Cai P, Wu S, Xin Y, Wu Y, Huang Q.	PeerJ	10.7717/peerj.7228	2019
Metabolism	Functional interaction between ribosomal protein L6 and RbgA during ribosome assembly.	Gulati M, Jain N, Davis JH, Williamson JR, Britton RA.	PLoS Genet	10.1371/journal.pgen.1004694	2014
Metabolism	Combined effect of improved cell yield and increased specific productivity enhances recombinant enzyme production in genome-reduced Bacillus subtilis strain MGB874.	Manabe K, Kageyama Y, Morimoto T, Ozawa T, Sawada K, Endo K, Tohata M, Ara K, Ozaki K, Ogasawara N.	Appl Environ Microbiol	10.1128/aem.06136-11	2011
Metabolism	A nitric oxide regulated small RNA controls expression of genes involved in redox homeostasis in Bacillus subtilis.	Durand S, Braun F, Lioliou E, Romilly C, Helfer AC, Kuhn L, Quittot N, Nicolas P, Romby P, Condon C.	PLoS Genet	10.1371/journal.pgen.1004957	2015
Enzymology	Recombinant Passenger Proteins Can Be Conveniently Purified by One-Step Affinity Chromatography.	Wang HZ, Chu ZZ, Chen CC, Cao AC, Tong X, Ouyang CB, Yuan QH, Wang MN, Wu ZK, Wang HH, Wang SB.	PLoS One	10.1371/journal.pone.0143598	2015
Metabolism	Structure, bioactivity, and resistance mechanism of streptomonomicin, an unusual lasso Peptide from an understudied halophilic actinomycete.	Metelev M, Tietz JI, Melby JO, Blair PM, Zhu L, Livnat I, Severinov K, Mitchell DA.	Chem Biol	10.1016/j.chembiol.2014.11.017	2015
Metabolism	The biofilm formation defect of a Bacillus subtilis flotillin-defective mutant involves the protease FtsH.	Yepes A, Schneider J, Mielich B, Koch G, Garcia-Betancur JC, Ramamurthi KS, Vlamakis H, Lopez D.	Mol Microbiol	10.1111/j.1365-2958.2012.08205.x	2012
Metabolism	The dnaB-pheA (256 degrees-240 degrees) region of the Bacillus subtilis chromosome containing genes responsible for stress responses, the utilization of plant cell walls and primary metabolism.	Wipat A, Carter N, Brignell SC, Guy BJ, Piper K, Sanders J, Emmerson PT, Harwood CR.	Microbiology (Reading)	10.1099/13500872-142-11-3067	1996
Metabolism	Phosphate-starvation-inducible proteins in Bacillus subtilis: a two-dimensional gel electrophoresis study.	Eymann C, Mach H, Harwood CR, Hecker M.	Microbiology (Reading)	10.1099/13500872-142-11-3163	1996
Metabolism	Subcellular localization of TatAd of Bacillus subtilis depends on the presence of TatCd or TatCy.	Ridder AN, de Jong EJ, Jongbloed JD, Kuipers OP.	J Bacteriol	10.1128/jb.00215-09	2009
Metabolism	Cell Division Protein FtsZ Is Unfolded for N-Terminal Degradation by Antibiotic-Activated ClpP.	Silber N, Pan S, Schakermann S, Mayer C, Brotz-Oesterhelt H, Sass P.	mBio	10.1128/mbio.01006-20	2020
Metabolism	Environmental salinity determines the specificity and need for Tat-dependent secretion of the YwbN protein in Bacillus subtilis.	van der Ploeg R, Mader U, Homuth G, Schaffer M, Denham EL, Monteferrante CG, Miethke M, Marahiel MA, Harwood CR, Winter T, Hecker M, Antelmann H, van Dijl JM.	PLoS One	10.1371/journal.pone.0018140	2011
Metabolism	A Bacillus flagellar motor that can use both Na+ and K+ as a coupling ion is converted by a single mutation to use only Na+.	Terahara N, Sano M, Ito M.	PLoS One	10.1371/journal.pone.0046248	2012
Metabolism	Untwisting of the DNA helix stimulates the endonuclease activity of Bacillus subtilis Nth at AP sites.	Collier C, Machon C, Briggs GS, Smits WK, Soultanas P.	Nucleic Acids Res	10.1093/nar/gkr785	2012
Metabolism	The Bacillus subtilis ydjL (bdhA) gene encodes acetoin reductase/2,3-butanediol dehydrogenase.	Nicholson WL.	Appl Environ Microbiol	10.1128/aem.00881-08	2008
	A Universally Applicable Strategy for Construction of Anti-Biofouling Adsorbents for Enhanced Uranium Recovery from Seawater.	Yu Q, Yuan Y, Wen J, Zhao X, Zhao S, Wang D, Li C, Wang X, Wang N.	Adv Sci (Weinh)	10.1002/advs.201900002	2019
Metabolism	Rare variants of the FMN riboswitch class in Clostridium difficile and other bacteria exhibit altered ligand specificity.	Atilho RM, Perkins KR, Breaker RR.	RNA	10.1261/rna.067975.118	2019
Metabolism	New genes in the 170 degrees region of the Bacillus subtilis genome encode DNA gyrase subunits, a thioredoxin, a xylanase and an amino acid transporter.	Rose M, Entian KD.	Microbiology (Reading)	10.1099/13500872-142-11-3097	1996
Enzymology	Overexpression, purification and preliminary X-ray analysis of pullulanase from Bacillus subtilis strain 168.	Malle D, Itoh T, Hashimoto W, Murata K, Utsumi S, Mikami B.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309106007901	2006
Genetics	A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products.	Buytaers FE, Fraiture MA, Berbers B, Vandermassen E, Hoffman S, Papazova N, Vanneste K, Marchal K, Roosens NHC, De Keersmaecker SCJ.	Food Chem (Oxf)	10.1016/j.fochms.2021.100023	2021
	Differential responses of Bacillus subtilis rRNA promoters to nutritional stress.	Samarrai W, Liu DX, White AM, Studamire B, Edelstein J, Srivastava A, Widom RL, Rudner R.	J Bacteriol	10.1128/jb.00708-10	2011
Metabolism	Activity of the osmotically regulated yqiHIK promoter from Bacillus subtilis is controlled at a distance.	Fischer KE, Bremer E.	J Bacteriol	10.1128/jb.01041-12	2012
	Transcription-associated mutation in Bacillus subtilis cells under stress.	Pybus C, Pedraza-Reyes M, Ross CA, Martin H, Ona K, Yasbin RE, Robleto E.	J Bacteriol	10.1128/jb.00354-10	2010
Biotechnology	Bacillus Pectinases as Key Biocatalysts for a Circular Bioeconomy: From Green Extraction to Process Optimization and Industrial Scale-Up.	Kaissar FZ, Bouacem K, Benine ML, Mechri S, Sharma SR, Singh VK, Bakli M, Lebouachera SEI, Emiliani G.	BioTech (Basel)	10.3390/biotech14030074	2025
	Exploring the agronomic traits, antioxidant and antifungal properties of Hermetia illucens frass extract in durum wheat (Triticum durum Desf.)	Vitti A, Coviello L, Falabella P, Mang S, Scieuzo C, Iannielli F, Ronga D, Nuzzaci M.	BMC Plant Biol		2025
	Assessment and optimization of xylanase production using co-cultures of Bacillus subtilis and Kluyveromyces marxianus.	Yardimci GO, Cekmecelioglu D.	3 Biotech	10.1007/s13205-018-1315-y	2018
	Isolation and Characterization of Endophyte Bacillus velezensis KOF112 from Grapevine Shoot Xylem as Biological Control Agent for Fungal Diseases.	Hamaoka K, Aoki Y, Suzuki S.	Plants (Basel)	10.3390/plants10091815	2021
Enzymology	Optimizing Culture Conditions by Statistical Approach to Enhance Production of Pectinase from Bacillus sp. Y1.	Guo F, Li X, Zhao J, Li G, Gao P, Han X.	Biomed Res Int	10.1155/2019/8146948	2019
	Cloning and characterization of mersacidin like bacteriocin from Bacillus licheniformis MKU3 in Escherichia coli.	Kayalvizhi N, Rameshkumar N, Gunasekaran P.	J Food Sci Technol	10.1007/s13197-016-2195-y	2016
Enzymology	Bioprospecting Kluyveromyces marxianus as a Robust Host for Industrial Biotechnology.	Bilal M, Ji L, Xu Y, Xu S, Lin Y, Iqbal HMN, Cheng H.	Front Bioeng Biotechnol	10.3389/fbioe.2022.851768	2022
	Synthesis, Docking, Computational Studies, and Antimicrobial Evaluations of New Dipeptide Derivatives Based on Nicotinoylglycylglycine Hydrazide.	Khalaf HS, Naglah AM, Al-Omar MA, Moustafa GO, Awad HM, Bakheit AH.	Molecules	10.3390/molecules25163589	2020
	The Synthesis of Molecular Docking Studies, In Vitro Antimicrobial and Antifungal Activities of Novel Dipeptide Derivatives Based on N-(2-(2-Hydrazinyl-2-oxoethylamino)-2-oxoethyl)-nicotinamide.	Moustafa G, Khalaf H, Naglah A, Al-Wasidi A, Al-Jafshar N, Awad H.	Molecules	10.3390/molecules23040761	2018
	Synthesis and Antimicrobial Evaluation of a New Series of Heterocyclic Systems Bearing a Benzosuberone Scaffold.	El-Salam OI, Alsayed AS, Ali KA, Elwahab AA, El-Galil E Amr A, Awad HM.	Molecules	10.3390/molecules201119701	2015
	Autonomous Planetary Liquid Sampler (APLS) for In Situ Sample Acquisition and Handling from Liquid Environments.	Nazarious MI, Becker L, Zorzano MP, Martin-Torres J.	Sensors (Basel)	10.3390/s24186107	2024
	Effect of Probiotics on Tenebrio molitor Larval Development and Resistance against the Fungal Pathogen Metarhizium brunneum.	Dahal S, Jensen AB, Lecocq A.	Insects	10.3390/insects13121114	2022
	In Vitro Antimicrobial and Antibiofilm Properties and Bioaccessibility after Oral Digestion of Chemically Characterized Extracts Obtained from Cistus × incanus L., Scutellaria lateriflora L., and Their Combination.	Ullah H, Minno AD, Filippis A, Sommella E, Buccato DG, Lellis LF, El-Seedi HR, Khalifa SAM, Piccinocchi R, Galdiero M, Campiglia P, Daglia M.	Foods	10.3390/foods12091826	2023
	Discovery, synthesis and antibacterial evaluation of phenolic compounds from Cylicodiscus gabunensis.	Aldulaimi O, Drijfhout F, Uche FI, Horrocks P, Li WW.	BMC Complement Altern Med	10.1186/s12906-019-2589-2	2019
Enzymology	Properties of the glucose phosphotransferase system of Clostridium acetobutylicum NCIB 8052.	Mitchell WJ, Shaw JE, Andrews L.	Appl Environ Microbiol	10.1128/aem.57.9.2534-2539.1991	1991
	A butyrate-producing synbiotic mitigates intestinal inflammation in a murine colitis model.	Sung H, Cho SY, Ma SH, You JS, Yoon MY, Yoon SS.	mLife	10.1002/mlf2.70027	2025
	Omics insights into Bacillus velezensis LMY3-5 defense against Botryosphaeria dothidea in kiwifruit.	Ren C, Liu Y, Su W, Han Z, Wu D, Li W.	Front Microbiol	10.3389/fmicb.2025.1633015	2025
	Tyrosinase Inhibitory Activity of Soybeans Fermented with Bacillus subtilis Capable of Producing a Phenolic Glycoside, Arbutin.	Jin YH, Jeon AR, Mah JH.	Antioxidants (Basel)	10.3390/antiox9121301	2020
	Study on the Identification Methods for Effective Microorganisms in Commercially Available Organic Agriculture Materials.	Bahuguna A, Joe AR, Kumar V, Lee JS, Kim SY, Moon JY, Cho SK, Cho H, Kim M.	Microorganisms	10.3390/microorganisms8101568	2020
	Bacterial Gamma-Glutamyl Transpeptidase, an Emerging Biocatalyst: Insights Into Structure-Function Relationship and Its Biotechnological Applications.	Saini M, Kashyap A, Bindal S, Saini K, Gupta R.	Front Microbiol	10.3389/fmicb.2021.641251	2021
	Effect of Calcium and Manganese Supplementation on Heat Resistance of Spores of Bacillus Species Associated With Food Poisoning, Spoilage, and Fermentation.	Sinnela MT, Pawluk AM, Jin YH, Kim D, Mah JH.	Front Microbiol	10.3389/fmicb.2021.744953	2021
Biotechnology	Secondary metabolite production and the safety of industrially important members of the Bacillus subtilis group.	Harwood CR, Mouillon JM, Pohl S, Arnau J.	FEMS Microbiol Rev	10.1093/femsre/fuy028	2018
	Antimicrobial properties of selected microalgae exopolysaccharide-enriched extracts: influence of antimicrobial assays and targeted microorganisms.	Pointcheval M, Masse A, Floc'hlay D, Chanonat F, Estival J, Durand MJ.	Front Microbiol	10.3389/fmicb.2025.1536185	2025
Pathogenicity	Peptidoglycan potentiates the membrane disrupting effect of the carboxyamidated form of DMS-DA6, a Gram-positive selective antimicrobial peptide isolated from Pachymedusa dacnicolor skin.	Cardon S, Sachon E, Carlier L, Drujon T, Walrant A, Aleman-Navarro E, Martinez-Osorio V, Guianvarc'h D, Sagan S, Fleury Y, Marquant R, Piesse C, Rosenstein Y, Auvynet C, Lacombe C.	PLoS One	10.1371/journal.pone.0205727	2018
Metabolism	Characterization of leucocin B-KM432Bz from Leuconostoc pseudomesenteroides isolated from boza, and comparison of its efficiency to pediocin PA-1.	Makhloufi KM, Carre-Mlouka A, Peduzzi J, Lombard C, van Reenen CA, Dicks LM, Rebuffat S.	PLoS One	10.1371/journal.pone.0070484	2013
	Synthesis of Quinolones and Zwitterionic Quinolonate Derivatives with Broad-Spectrum Antibiotic Activity.	Suay-Garcia B, Bueso-Bordils JI, Anton-Fos G, Perez-Gracia MT, Falco A, Aleman-Lopez P.	Pharmaceuticals (Basel)	10.3390/ph15070818	2022
	Mode of action of netzahualcoyone.	Moujir L, Gutierrez-Navarro AM, Gonzalez AG, Ravelo AG, Luis JG.	Antimicrob Agents Chemother	10.1128/aac.35.1.211	1991
Pathogenicity	PHACOS, a functionalized bacterial polyester with bactericidal activity against methicillin-resistant Staphylococcus aureus.	Dinjaski N, Fernandez-Gutierrez M, Selvam S, Parra-Ruiz FJ, Lehman SM, San Roman J, Garcia E, Garcia JL, Garcia AJ, Prieto MA.	Biomaterials	10.1016/j.biomaterials.2013.09.059	2014
	Characterisation and optimisation of microbial production of transglutaminase produced by Streptoverticillium cinnamoneum.	Kolotylo V, Synowiec A, Piwowarek K, Gientka I, Kieliszek M.	Appl Microbiol Biotechnol	10.1007/s00253-025-13606-y	2025
	Secondary Metabolites with Antimicrobial Activities from Chamaecyparis obtusa var. formosana.	Wu MD, Cheng MJ, Chen JJ, Khamthong N, Lin WW, Kuo YH.	Molecules	10.3390/molecules27020429	2022
Metabolism	Rhizobacteria from 'flowering desert' events contribute to the mitigation of water scarcity stress during tomato seedling germination and growth.	Astorga-Elo M, Gonzalez S, Acuna JJ, Sadowsky MJ, Jorquera MA.	Sci Rep	10.1038/s41598-021-93303-8	2021
	Population and genetic diversity of rhizobia nodulating chickpea in Indo-Gangetic plains of India.	Kumar SC, Kumar M, Singh R, Saxena AK.	Braz J Microbiol	10.1007/s42770-024-01473-0	2024
Metabolism	Dietary Supplementation of Microbial Dextran and Inulin Exerts Hypocholesterolemic Effects and Modulates Gut Microbiota in BALB/c Mice Models.	Jawad I, Bin Tawseen H, Irfan M, Ahmad W, Hassan M, Sattar F, Awan FR, Khaliq S, Akhtar N, Akhtar K, Anwar MA, Munawar N.	Int J Mol Sci	10.3390/ijms24065314	2023
	Antibacterial and Antioxidant Activity of the Fruit of Macaranga tanarius, the Plant Origin of Taiwanese Green Propolis.	Chien YH, Yu YH, Ye SR, Chen YW.	Antioxidants (Basel)	10.3390/antiox11071242	2022
	Green Synthesis of Copper Nano-Drug and Its Dental Application upon Periodontal Disease-Causing Microorganisms.	El-Rab SMFG, Basha S, Ashour AA, Enan ET, Alyamani AA, Felemban NH.	J Microbiol Biotechnol	10.4014/jmb.2106.06008	2021
	Antibacterial activity of propolins from Taiwanese green propolis.	Chen YW, Ye SR, Ting C, Yu YH.	J Food Drug Anal	10.1016/j.jfda.2017.10.002	2018
	Genetic, physiological and biochemical characterization of Bacillus sp. strain RMB7 exhibiting plant growth promoting and broad spectrum antifungal activities.	Ali S, Hameed S, Imran A, Iqbal M, Lazarovits G.	Microb Cell Fact	10.1186/s12934-014-0144-x	2014
	Simultaneous Production of Multiple Antimicrobial Compounds by Bacillus velezensis ML122-2 Isolated From Assam Tea Leaf [Camellia sinensis var. assamica (J.W.Mast.) Kitam.].	Rungsirivanich P, Parlindungan E, O'Connor PM, Field D, Mahony J, Thongwai N, van Sinderen D.	Front Microbiol	10.3389/fmicb.2021.789362	2021
	Community of natural lactic acid bacteria and silage fermentation of corn stover and sugarcane tops in Africa.	Cai Y, Du Z, Yamasaki S, Nguluve D, Tinga B, Macome F, Oya T.	Asian-Australas J Anim Sci	10.5713/ajas.19.0348	2020
Phylogeny	Naturally occurring lactic Acid bacteria isolated from tomato pomace silage.	Wu JJ, Du RP, Gao M, Sui YQ, Xiu L, Wang X.	Asian-Australas J Anim Sci	10.5713/ajas.2013.13670	2014
	Inhibition of pathogenic and spoilage bacteria by a novel biofilm-forming Lactobacillus isolate: a potential host for the expression of heterologous proteins.	Jalilsood T, Baradaran A, Song AA, Foo HL, Mustafa S, Saad WZ, Yusoff K, Rahim RA.	Microb Cell Fact	10.1186/s12934-015-0283-8	2015
Phylogeny	Phylogenetic diversity of lactic acid bacteria associated with paddy rice silage as determined by 16S ribosomal DNA analysis.	Ennahar S, Cai Y, Fujita Y.	Appl Environ Microbiol	10.1128/aem.69.1.444-451.2003	2003
Metabolism	Characterization and identification of Pediococcus species isolated from forage crops and their application for silage preparation.	Cai Y, Kumai S, Ogawa M, Benno Y, Nakase T.	Appl Environ Microbiol	10.1128/aem.65.7.2901-2906.1999	1999
	Discovery and Biosynthesis of Antimicrobial Phenethylamine Alkaloids from the Marine Flavobacterium Tenacibaculum discolor sv11.	Wang L, Linares-Otoya V, Liu Y, Mettal U, Marner M, Armas-Mantilla L, Willbold S, Kurtan T, Linares-Otoya L, Schaberle TF	J Nat Prod	10.1021/acs.jnatprod.1c01173	2022
	Detection and relative quantification of amine oxidase gene (yobN) in Bacillus subtilis: application of real-time quantitative PCR.	Pistekova H, Jancova P, Bunkova L, Sopik T, Marsalkova K, Bercikova L, Bunka F	J Food Sci Technol	10.1007/s13197-021-05090-9	2021
Cultivation	Modeling the time course of ComX: towards molecular process control for Bacillus wild-type cultivations.	Treinen C, Magosch O, Hoffmann M, Klausmann P, Wurtz B, Pfannstiel J, Morabbi Heravi K, Lilge L, Hausmann R, Henkel M	AMB Express	10.1186/s13568-021-01306-5	2021
	Biofilm hydrophobicity in environmental isolates of Bacillus subtilis.	Kalamara M, Abbott JC, MacPhee CE, Stanley-Wall NR	Microbiology (Reading)	10.1099/mic.0.001082	2021
Enzymology	Blanching Pre-Treatment Promotes High Yields, Bioactive Compounds, Antioxidants, Enzyme Inactivation and Antibacterial Activity of 'Wonderful' Pomegranate Peel Extracts at Three Different Harvest Maturities.	Magangana TP, Makunga NP, la Grange C, Stander MA, Fawole OA, Opara UL	Antioxidants (Basel)	10.3390/antiox10071119	2021
Pathogenicity	Diverse LXG toxin and antitoxin systems specifically mediate intraspecies competition in Bacillus subtilis biofilms.	Kobayashi K	PLoS Genet	10.1371/journal.pgen.1009682	2021
Metabolism	Deletion of Rap-Phr systems in Bacillus subtilis influences in vitro biofilm formation and plant root colonization.	Nordgaard M, Mortensen RMR, Kirk NK, Gallegos-Monterrosa R, Kovacs AT	Microbiologyopen	10.1002/mbo3.1212	2021
Biotechnology	Rapid detection and discrimination of food-related bacteria using IR-microspectroscopy in combination with multivariate statistical analysis.	Klein D, Breuch R, Reinmuller J, Engelhard C, Kaul P	Talanta	10.1016/j.talanta.2021.122424	2021
	In ovo administration of Bacillus subtilis serotypes effect hatchability, 21-day performance, and intestinal microflora.	Castaneda CD, Gamble JN, Wamsley KGS, McDaniel CD, Kiess AS	Poult Sci	10.1016/j.psj.2021.101125	2021
Phylogeny	Amycolatomycins A and B, Cyclic Hexapeptides Isolated from an Amycolatopsis sp. 195334CR.	Primahana G, Risdian C, Mozef T, Wink J, Surup F, Stadler M	Antibiotics (Basel)	10.3390/antibiotics10030261	2021
Genetics	Draft Genome Sequence of the Type Strain Bacillus subtilis subsp. subtilis DSM10.	Lilge L, Hertel R, Morabbi Heravi K, Henkel M, Commichau FM, Hausmann R	Microbiol Resour Announc	10.1128/MRA.00158-21	2021
Phylogeny	Antimicrobial Activity of Lactococcus lactis subsp. lactis Isolated from a Stranded Cuvier's Beaked Whale (Ziphius cavirostris) against Gram-Positive and -Negative Bacteria.	Suzuki A, Suzuki M	Microorganisms	10.3390/microorganisms9020243	2021
Biotechnology	Surfactin production is not essential for pellicle and root-associated biofilm development of Bacillus subtilis.	Therien M, Kiesewalter HT, Auria E, Charron-Lamoureux V, Wibowo M, Maroti G, Kovacs AT, Beauregard PB	Biofilm	10.1016/j.bioflm.2020.100021	2020
Pathogenicity	Biomedical Applications of Mycosynthesized Selenium Nanoparticles Using Penicillium expansum ATTC 36200.	Hashem AH, Khalil AMA, Reyad AM, Salem SS	Biol Trace Elem Res	10.1007/s12011-020-02506-z	2021
Metabolism	Construction and description of a constitutive plipastatin mono-producing Bacillus subtilis.	Vahidinasab M, Lilge L, Reinfurt A, Pfannstiel J, Henkel M, Morabbi Heravi K, Hausmann R	Microb Cell Fact	10.1186/s12934-020-01468-0	2020
Phylogeny	Characterization and Quantitative Determination of a Diverse Group of Bacillus subtilis subsp. subtilis NCIB 3610 Antibacterial Peptides.	Karagiota A, Tsitsopoulou H, Tasakis RN, Zoumpourtikoudi V, Touraki M	Probiotics Antimicrob Proteins	10.1007/s12602-020-09706-y	2020
Metabolism	RnhP is a plasmid-borne RNase HI that contributes to genome maintenance in the ancestral strain Bacillus subtilis NCIB 3610.	Nye TM, McLean EK, Burrage AM, Dennison DD, Kearns DB, Simmons LA	Mol Microbiol	10.1111/mmi.14601	2020
Phenotype	6S-2 RNA deletion in the undomesticated B. subtilis strain NCIB 3610 causes a biofilm derepression phenotype.	Thuring M, Ganapathy S, Schluter MAC, Lechner M, Hartmann RK	RNA Biol	10.1080/15476286.2020.1795408	2020
	The Large pBS32/pLS32 Plasmid of Ancestral Bacillus subtilis.	Burton AT, Kearns DB	J Bacteriol	10.1128/JB.00290-20	2020
	Bacillus subtilis and Bacillus velezensis population dynamics and quantification of spores after inoculation on ornamental plants.	Charron-Lamoureux V, Therien M, Konk A, Beauregard PB	Can J Microbiol	10.1139/cjm-2020-0174	2020
Enzymology	A New Citrinin Derivative from the Indonesian Marine Sponge-Associated Fungus Penicillium citrinum.	Sabdaningsih A, Liu Y, Mettal U, Heep J, Riyanti, Wang L, Cristianawati O, Nuryadi H, Triandala Sibero M, Marner M, Radjasa OK, Sabdono A, Trianto A, Schaberle TF	Mar Drugs	10.3390/md18040227	2020
Biotechnology	[gamma-Polyglutamic acid production in Corynebacterium glutamicum using sugar by one-step fermentation].	Cheng H, Chen Y, Zhu Y, Cao R, Xu G, Zhang X, Shi J, Xu Z	Sheng Wu Gong Cheng Xue Bao	10.13345/j.cjb.190071	2020
	Microbial extraction of chitin from seafood waste using sugars derived from fruit waste-stream.	Tan YN, Lee PP, Chen WN	AMB Express	10.1186/s13568-020-0954-7	2020
Pathogenicity	Metal ions weaken the hydrophobicity and antibiotic resistance of Bacillus subtilis NCIB 3610 biofilms.	Falcon Garcia C, Kretschmer M, Lozano-Andrade CN, Schonleitner M, Dragos A, Kovacs AT, Lieleg O	NPJ Biofilms Microbiomes	10.1038/s41522-019-0111-8	2020
Phylogeny	A First Study of the Virulence Potential of a Bacillus subtilis Isolate From Deep-Sea Hydrothermal Vent.	Gu HJ, Sun QL, Luo JC, Zhang J, Sun L	Front Cell Infect Microbiol	10.3389/fcimb.2019.00183	2019
	Importance of the biofilm matrix for the erosion stability of Bacillus subtilis NCIB 3610 biofilms.	Klotz M, Kretschmer M, Goetz A, Ezendam S, Lieleg O, Opitz M	RSC Adv	10.1039/c9ra01955c	2019
Biotechnology	An efficient process for co-production of gamma-aminobutyric acid and probiotic Bacillus subtilis cells.	Wang H, Huang J, Sun L, Xu F, Zhang W, Zhan J	Food Sci Biotechnol	10.1007/s10068-018-0461-7	2018
Genetics	Near-Complete Genome Sequences of Streptomyces sp. Strains AC1-42T and AC1-42W, Isolated from Bat Guano from Cabalyorisa Cave, Mabini, Pangasinan, Philippines.	De Leon MP, Park AY, Montecillo AD, Siringan MAT, Rosana ARR, Kim SG	Microbiol Resour Announc	10.1128/MRA.00904-18	2018
Phylogeny	Complete Genome of Bacillus subtilis subsp. subtilis KCTC 3135(T) and Variation in Cell Wall Genes of B. subtilis Strains.	Ahn S, Jun S, Ro HJ, Kim JH, Kim S	J Microbiol Biotechnol	10.4014/jmb.1712.12006	2018
Biotechnology	Efficient production of extracellular pullulanase in Bacillus subtilis ATCC6051 using the host strain construction and promoter optimization expression system.	Liu X, Wang H, Wang B, Pan L	Microb Cell Fact	10.1186/s12934-018-1011-y	2018
Biotechnology	A single mutation in rapP induces cheating to prevent cheating in Bacillus subtilis by minimizing public good production.	Lyons NA, Kolter R	Commun Biol	10.1038/s42003-018-0136-1	2018
	Complete genome of Bacillussubtilis subsp. subtilis KCTC 3135(T) and variation in cell wall genes of B. subtilis strains.	Ahn S, Jun S, Ro HJ, Kim JH, Kim S	J Microbiol Biotechnol	10.4014/jmb,1712.12006	2018
Pathogenicity	From bugs to drugs: Combating antimicrobial resistance by discovering novel antibiotics.	Abou Fayad A, Itani D, Miari M, Tanelian A, Iweir S, Matar GM	J Infect Dev Ctries	10.3855/jidc.10108	2018
Biotechnology	Optimization of Effective Minerals on Riboflavin Production by Bacillus subtilis subsp. subtilis ATCC 6051 Using Statistical Designs.	Oraei M, Razavi SH, Khodaiyan F	Avicenna J Med Biotechnol		2018
Metabolism	Enzymatic Synthesis and Structural Characterization of Theanderose through Transfructosylation Reaction Catalyzed by Levansucrase from Bacillus subtilis CECT 39.	Ruiz-Aceituno L, Sanz ML, de Las Rivas B, Munoz R, Kolida S, Jimeno ML, Moreno FJ	J Agric Food Chem	10.1021/acs.jafc.7b03092	2017
	Akanthopyrones A-D, alpha-Pyrones Bearing a 4-O-Methyl-beta-d-glucopyranose Moiety from the Spider-Associated Ascomycete Akanthomyces novoguineensis.	Kuephadungphan W, Helaly SE, Daengrot C, Phongpaichit S, Luangsa-Ard JJ, Rukachaisirikul V, Stadler M	Molecules	10.3390/molecules22071202	2017
	Genetic evidence for a novel competence inhibitor in the industrially important Bacillus licheniformis.	Muth C, Buchholz M, Schmidt C, Volland S, Meinhardt F	AMB Express	10.1186/s13568-017-0447-5	2017
Genetics	Complete Genome Sequence of Undomesticated Bacillus subtilis Strain NCIB 3610.	Nye TM, Schroeder JW, Kearns DB, Simmons LA	Genome Announc	10.1128/genomeA.00364-17	2017
Pathogenicity	Sporicidal activity of ceragenin CSA-13 against Bacillus subtilis.	Piktel E, Pogoda K, Roman M, Niemirowicz K, Tokajuk G, Wroblewska M, Szynaka B, Kwiatek WM, Savage PB, Bucki R	Sci Rep	10.1038/srep44452	2017
Metabolism	Specific Bacillus subtilis 168 variants form biofilms on nutrient-rich medium.	Gallegos-Monterrosa R, Mhatre E, Kovacs AT	Microbiology (Reading)	10.1099/mic.0.000371	2016
Metabolism	Studies on bioactivity and secondary metabolites of crude extracts of Bidens pilosa L. (Asteraceae): A medicinal plant used in the Transkei region of South Africa.	Njume C, Gqaza BM, Rozani C, Goduka NI	Pak J Pharm Sci		2016
Phenotype	Characterization of Bacillus subtilis Colony Biofilms via Mass Spectrometry and Fluorescence Imaging.	Si T, Li B, Zhang K, Xu Y, Zhao H, Sweedler JV	J Proteome Res	10.1021/acs.jproteome.6b00127	2016
Pathogenicity	Laxitextines A and B, Cyathane Xylosides from the Tropical Fungus Laxitextum incrustatum.	Mudalungu CM, Richter C, Wittstein K, Abdalla MA, Matasyoh JC, Stadler M, Sussmuth RD	J Nat Prod	10.1021/acs.jnatprod.5b00950	2016
Biotechnology	Substitution of the native srfA promoter by constitutive Pveg in two B. subtilis strains and evaluation of the effect on Surfactin production.	Willenbacher J, Mohr T, Henkel M, Gebhard S, Mascher T, Syldatk C, Hausmann R	J Biotechnol	10.1016/j.jbiotec.2016.03.002	2016
Phylogeny	Rare actinomycetes Nocardia caishijiensis and Pseudonocardia carboxydivorans as endophytes, their bioactivity and metabolites evaluation.	Tanvir R, Sajid I, Hasnain S, Kulik A, Grond S	Microbiol Res	10.1016/j.micres.2016.01.003	2016
Metabolism	Direct Comparison of Physical Properties of Bacillus subtilis NCIB 3610 and B-1 Biofilms.	Kesel S, Grumbein S, Gumperlein I, Tallawi M, Marel AK, Lieleg O, Opitz M	Appl Environ Microbiol	10.1128/AEM.03957-15	2016
Enzymology	Synthesis of potentially-bioactive lactosyl-oligofructosides by a novel bi-enzymatic system using bacterial fructansucrases.	Diez-Municio M, Gonzalez-Santana C, de Las Rivas B, Jimeno ML, Munoz R, Moreno FJ, Herrero M	Food Res Int	10.1016/j.foodres.2015.09.035	2015
Enzymology	Bacillus subtilis vegetative isolate surviving chlorine dioxide exposure: an elusive mechanism of resistance.	Martin DJ, Wesgate RL, Denyer SP, McDonnell G, Maillard JY	J Appl Microbiol	10.1111/jam.12963	2015
Metabolism	Valorization of Cheese and Tofu Whey through Enzymatic Synthesis of Lactosucrose.	Corzo-Martinez M, Luscher A, de Las Rivas B, Munoz R, Moreno FJ	PLoS One	10.1371/journal.pone.0139035	2015
Biotechnology	Enhancement of Surfactin yield by improving the medium composition and fermentation process.	Willenbacher J, Yeremchuk W, Mohr T, Syldatk C, Hausmann R	AMB Express	10.1186/s13568-015-0145-0	2015
Pathogenicity	Development of bio-composites with novel characteristics: Evaluation of phenol-induced antibacterial, biocompatible and biodegradable behaviours.	Iqbal HM, Kyazze G, Locke IC, Tron T, Keshavarz T	Carbohydr Polym	10.1016/j.carbpol.2015.05.046	2015
	Virtual screening of a milk peptide database for the identification of food-derived antimicrobial peptides.	Liu Y, Eichler J, Pischetsrieder M	Mol Nutr Food Res	10.1002/mnfr.201500182	2015
Pathogenicity	Polyelectrolyte-mediated increase of biofilm mass formation.	Bucki R, Niemirowicz K, Wnorowska U, Watek M, Byfield FJ, Cruz K, Wroblewska M, Janmey PA	BMC Microbiol	10.1186/s12866-015-0457-x	2015
	Sterilization of hydrogen peroxide resistant bacterial spores with stabilized chlorine dioxide.	Friedline A, Zachariah M, Middaugh A, Heiser M, Khanna N, Vaishampayan P, Rice CV	AMB Express	10.1186/s13568-015-0109-4	2015
Biotechnology	Foam-free production of Surfactin via anaerobic fermentation of Bacillus subtilis DSM 10(T).	Willenbacher J, Rau JT, Rogalla J, Syldatk C, Hausmann R	AMB Express	10.1186/s13568-015-0107-6	2015
Pathogenicity	Design, synthesis and in vitro bactericidal/fungicidal screening of some vanadyl(IV)complexes with mono- and di-substituted ONS donor triazoles.	Sumrra SH, Hanif M, Chohan ZH	J Enzyme Inhib Med Chem	10.3109/14756366.2014.976565	2015
Phylogeny	Inhibition of the growth of Bacillus subtilis DSM10 by a newly discovered antibacterial protein from the soil metagenome.	O'Mahony MM, Henneberger R, Selvin J, Kennedy J, Doohan F, Marchesi JR, Dobson AD	Bioengineered	10.1080/21655979.2015.1018493	2015
Genetics	Whole genome complete resequencing of Bacillus subtilis natto by combining long reads with high-quality short reads.	Kamada M, Hase S, Sato K, Toyoda A, Fujiyama A, Sakakibara Y	PLoS One	10.1371/journal.pone.0109999	2014
Pathogenicity	Identification of ypqP as a New Bacillus subtilis biofilm determinant that mediates the protection of Staphylococcus aureus against antimicrobial agents in mixed-species communities.	Sanchez-Vizuete P, Le Coq D, Bridier A, Herry JM, Aymerich S, Briandet R	Appl Environ Microbiol	10.1128/AEM.02473-14	2014
Enzymology	Bactericidal activity of nukacin ISK-1: an alternative mode of action.	Roy U, Islam MR, Nagao J, Iida H, Mahin AA, Li M, Zendo T, Nakayama J, Sonomoto K	Biosci Biotechnol Biochem	10.1080/09168451.2014.918485	2014
Metabolism	Carbohydrate coating reduces adhesion of biofilm-forming Bacillus subtilis to gold surfaces.	Kesel S, Mader A, Seeberger PH, Lieleg O, Opitz M	Appl Environ Microbiol	10.1128/AEM.01600-14	2014
Metabolism	Bacillaene and sporulation protect Bacillus subtilis from predation by Myxococcus xanthus.	Muller S, Strack SN, Hoefler BC, Straight PD, Kearns DB, Kirby JR	Appl Environ Microbiol	10.1128/AEM.01621-14	2014
Metabolism	Localization of the Bacillus subtilis beta-propeller phytase transcripts in nodulated roots of Phaseolus vulgaris supplied with phytate.	Maougal RT, Bargaz A, Sahel C, Amenc L, Djekoun A, Plassard C, Drevon JJ	Planta	10.1007/s00425-013-2023-9	2014
Genetics	SP10 infectivity is aborted after bacteriophage SP10 infection induces nonA transcription on the prophage SPbeta region of the Bacillus subtilis genome.	Yamamoto T, Obana N, Yee LM, Asai K, Nomura N, Nakamura K	J Bacteriol	10.1128/JB.01240-13	2013
Metabolism	Menaquinone and iron are essential for complex colony development in Bacillus subtilis.	Pelchovich G, Omer-Bendori S, Gophna U	PLoS One	10.1371/journal.pone.0079488	2013
Enzymology	24-Branched Delta5 sterols from Laurencia papillosa red seaweed with antibacterial activity against human pathogenic bacteria.	Kavita K, Singh VK, Jha B	Microbiol Res	10.1016/j.micres.2013.07.002	2013
Pathogenicity	Plasmid-encoded ComI inhibits competence in the ancestral 3610 strain of Bacillus subtilis.	Konkol MA, Blair KM, Kearns DB	J Bacteriol	10.1128/JB.00696-13	2013
Pathogenicity	Exopolymer diversity and the role of levan in Bacillus subtilis biofilms.	Dogsa I, Brloznik M, Stopar D, Mandic-Mulec I	PLoS One	10.1371/journal.pone.0062044	2013
Phenotype	BacillOndex: an integrated data resource for systems and synthetic biology.	Misirli G, Wipat A, Mullen J, James K, Pocock M, Smith W, Allenby N, Hallinan JS	J Integr Bioinform	10.2390/biecoll-jib-2013-224	2013
Metabolism	A plasmid-encoded phosphatase regulates Bacillus subtilis biofilm architecture, sporulation, and genetic competence.	Parashar V, Konkol MA, Kearns DB, Neiditch MB	J Bacteriol	10.1128/JB.02030-12	2013
Enzymology	Spiralisones A-D: acylphloroglucinol hemiketals from an Australian marine brown alga, Zonaria spiralis.	Zhang H, Xiao X, Conte MM, Khalil Z, Capon RJ	Org Biomol Chem	10.1039/c2ob26988k	2012
Metabolism	Characterization and optimization of Bacillus subtilis ATCC 6051 as an expression host.	Kabisch J, Thurmer A, Hubel T, Popper L, Daniel R, Schweder T	J Biotechnol	10.1016/j.jbiotec.2012.06.034	2012
Metabolism	Abnormal morphology of Bacillus subtilis ugtP mutant cells lacking glucolipids.	Matsuoka S, Chiba M, Tanimura Y, Hashimoto M, Hara H, Matsumoto K	Genes Genet Syst	10.1266/ggs.86.295	2011
Metabolism	Assessment of Tamarindus indica extracts for antibacterial activity.	Nwodo UU, Obiiyeke GE, Chigor VN, Okoh AI	Int J Mol Sci	10.3390/ijms12106385	2011
Enzymology	Inhibitory effect of prophage SPbeta fragments on phage SP10 ribonucleotide reductase function and its multiplication in Bacillus subtilis.	Yee LM, Matsuoka S, Yano K, Sadaie Y, Asai K	Genes Genet Syst	10.1266/ggs.86.7	2011
Metabolism	Enhancing isoprene production by genetic modification of the 1-deoxy-d-xylulose-5-phosphate pathway in Bacillus subtilis.	Xue J, Ahring BK	Appl Environ Microbiol	10.1128/AEM.02341-10	2011
Genetics	Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42.	Ruckert C, Blom J, Chen X, Reva O, Borriss R	J Biotechnol	10.1016/j.jbiotec.2011.01.006	2011
Pathogenicity	Synthesis, characterization, spectrophotometric, structural and antimicrobial studies of the newly charge transfer complex of p-phenylenediamine with pi acceptor picric acid.	Khan IM, Ahmad A, Oves M	Spectrochim Acta A Mol Biomol Spectrosc	10.1016/j.saa.2010.08.073	2010
Genetics	Development of amplified fragment length polymorphism-derived functional strain-specific markers to assess the persistence of 10 bacterial strains in soil microcosms.	Xiang SR, Cook M, Saucier S, Gillespie P, Socha R, Scroggins R, Beaudette LA	Appl Environ Microbiol	10.1128/AEM.00574-10	2010
Cultivation	A new laboratory cultivation of Paramecium bursaria using non-pathogenic bacteria strains.	Bator T	Z Naturforsch C J Biosci	10.1515/znc-2010-7-810	2010
Genetics	Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data.	Nishito Y, Osana Y, Hachiya T, Popendorf K, Toyoda A, Fujiyama A, Itaya M, Sakakibara Y	BMC Genomics	10.1186/1471-2164-11-243	2010
Metabolism	Transformation of environmental Bacillus subtilis isolates by transiently inducing genetic competence.	Nijland R, Burgess JG, Errington J, Veening JW	PLoS One	10.1371/journal.pone.0009724	2010
Metabolism	Anionic polymers of the cell wall of Bacillus subtilis subsp. subtilis VKM B-501(T).	Shashkov AS, Potekhina NV, Senchenkova SN, Kudryashova EB	Biochemistry (Mosc)	10.1134/s0006297909050095	2009
Metabolism	Selected nondigestible carbohydrates and prebiotics support the growth of probiotic fish bacteria mono-cultures in vitro.	Rurangwa E, Laranja JL, Van Houdt R, Delaedt Y, Geraylou Z, Van de Wiele T, Van Loo J, Van Craeyveld V, Courtin CM, Delcour JA, Ollevier F	J Appl Microbiol	10.1111/j.1365-2672.2008.04034.x	2009
Genetics	The origins of 168, W23, and other Bacillus subtilis legacy strains.	Zeigler DR, Pragai Z, Rodriguez S, Chevreux B, Muffler A, Albert T, Bai R, Wyss M, Perkins JB	J Bacteriol	10.1128/JB.00722-08	2008
Metabolism	SlrR/SlrA controls the initiation of biofilm formation in Bacillus subtilis.	Kobayashi K	Mol Microbiol	10.1111/j.1365-2958.2008.06369.x	2008
Enzymology	Properties of the reversible nonoxidative vanillate/4-hydroxybenzoate decarboxylase from Bacillus subtilis.	Lupa B, Lyon D, Shaw LN, Sieprawska-Lupa M, Wiegel J	Can J Microbiol	10.1139/w07-113	2008
	A viable Bacillus subtilis strain without functional extracytoplasmic function sigma genes.	Asai K, Ishiwata K, Matsuzaki K, Sadaie Y	J Bacteriol	10.1128/JB.01859-07	2008
Pathogenicity	Identification by quantitative carrier test of surrogate spore-forming bacteria to assess sporicidal chemicals for use against Bacillus anthracis.	Majcher MR, Bernard KA, Sattar SA	Appl Environ Microbiol	10.1128/AEM.01715-07	2007
Pathogenicity	Regulatory overlap and functional redundancy among Bacillus subtilis extracytoplasmic function sigma factors.	Mascher T, Hachmann AB, Helmann JD	J Bacteriol	10.1128/JB.00904-07	2007
Metabolism	Recombinant expression and characterization of XynD from Bacillus subtilis subsp. subtilis ATCC 6051: a GH 43 arabinoxylan arabinofuranohydrolase.	Bourgois TM, Van Craeyveld V, Van Campenhout S, Courtin CM, Delcour JA, Robben J, Volckaert G	Appl Microbiol Biotechnol	10.1007/s00253-007-0956-2	2007
Biotechnology	Tolerance to challenges miming gastrointestinal transit by spores and vegetative cells of Bacillus clausii.	Cenci G, Trotta F, Caldini G	J Appl Microbiol	10.1111/j.1365-2672.2006.03042.x	2006
Pathogenicity	Investigation of potential antibacterial properties of methanol extracts from fungus Ganoderma applanatum.	Moradali MF, Mostafavi H, Hejaroude GA, Tehrani AS, Abbasi M, Ghods S	Chemotherapy	10.1159/000094866	2006
Cultivation	Analysis of the life cycle of the soil saprophyte Bacillus cereus in liquid soil extract and in soil.	Vilain S, Luo Y, Hildreth MB, Brozel VS	Appl Environ Microbiol	10.1128/AEM.03076-05	2006
Metabolism	Cardiolipin enrichment in spore membranes and its involvement in germination of Bacillus subtilis Marburg.	Kawai F, Hara H, Takamatsu H, Watabe K, Matsumoto K	Genes Genet Syst	10.1266/ggs.81.69	2006
Biotechnology	Difference in transcription levels of cap genes for gamma-polyglutamic acid production between Bacillus subtilis IFO 16449 and Marburg 168.	Urushibata Y, Tokuyama S, Tahara Y	J Biosci Bioeng	10.1263/jbb.93.252	2002
Phylogeny	DNA base composition, susceptibility to bacteriophages and interspecific transformation as criteria for classification in the genus Bacillus.	Ikeda Y, Saito H, Miura K, Takagi J, Aoki H	J Gen Appl Microbiol		2004
Metabolism	Restriction and modification of SP10 phage by BsuM of Bacillus subtilis Marburg.	Matsuoka S, Asai K, Sadaie Y	FEMS Microbiol Lett	10.1016/j.femsle.2005.02.006	2005
Transcriptome	Identification of the nonA and nonB loci of Bacillus subtilis Marburg permitting the growth of SP10 phage.	Matsuoka S, Arai T, Murayama R, Kawamura F, Asai K, Sadaie Y	Genes Genet Syst	10.1266/ggs.79.311	2004
Phylogeny	Comparative analysis of physical maps of four Bacillus subtilis (natto) genomes.	Qiu D, Fujita K, Sakuma Y, Tanaka T, Ohashi Y, Ohshima H, Tomita M, Itaya M	Appl Environ Microbiol	10.1128/AEM.70.10.6247-6256.2004	2004
Phylogeny	A simple method to isolate biofilm-forming Bacillus subtilis and related species from plant roots.	Fall R, Kinsinger RF, Wheeler KA	Syst Appl Microbiol	10.1078/0723-2020-00267	2004
Metabolism	Genes involved in formation of structured multicellular communities by Bacillus subtilis.	Branda SS, Gonzalez-Pastor JE, Dervyn E, Ehrlich SD, Losick R, Kolter R	J Bacteriol	10.1128/JB.186.12.3970-3979.2004	2004
Pathogenicity	Evaluation of extracts of Anthocleista djalonensis, Nauclea latifolia and Uvaria afzalii for activity against bacterial isolates from cases of non-gonococcal urethritis.	Okoli AS, Iroegbu CU	J Ethnopharmacol	10.1016/j.jep.2003.12.015	2004
Enzymology	Validation of the 'Marburg bone bank system' for thermodisinfection of allogenic femoral head transplants using selected bacteria, fungi, and spores.	Pruss A, Seibold M, Benedix F, Frommelt L, von Garrel T, Gurtler L, Dorffel Y, Pauli G, Gobel UB	Biologicals	10.1016/j.biologicals.2003.08.002	2003
Phylogeny	Construction of physical maps of Bacillus subtilis (natto) strains.	Qiu D, Oshima H, Ohashi Y, Itaya M	Nucleic Acids Res Suppl	10.1093/nass/3.1.207	2003
Cultivation	Rapid surface motility in Bacillus subtilis is dependent on extracellular surfactin and potassium ion.	Kinsinger RF, Shirk MC, Fall R	J Bacteriol	10.1128/JB.185.18.5627-5631.2003	2003
Metabolism	Enhanced microbial biomass assay using mutant luciferase resistant to benzalkonium chloride.	Hattori N, Sakakibara T, Kajiyama N, Igarashi T, Maeda M, Murakami S	Anal Biochem	10.1016/s0003-2697(03)00322-1	2003
Phylogeny	Biofilm-specific cross-species induction of antimicrobial compounds in bacilli.	Yan L, Boyd KG, Adams DR, Burgess JG	Appl Environ Microbiol	10.1128/AEM.69.7.3719-3727.2003	2003
Enzymology	Significantly enhanced stability of glucose dehydrogenase by directed evolution.	Baik SH, Ide T, Yoshida H, Kagami O, Harayama S	Appl Microbiol Biotechnol	10.1007/s00253-002-1215-1	2003
Metabolism	Cytokine responses of human intestinal epithelial-like Caco-2 cells to the nonpathogenic bacterium Bacillus subtilis (natto).	Hosoi T, Hirose R, Saegusa S, Ametani A, Kiuchi K, Kaminogawa S	Int J Food Microbiol	10.1016/s0168-1605(02)00311-2	2003
Metabolism	Single-cell protein production from ram horn hydrolysate by bacteria.	Kurbanoglu EB, Algur OF	Bioresour Technol	10.1016/s0960-8524(02)00094-9	2002
Biotechnology	Immobilized bacterial spores for use as bioindicators in the validation of thermal sterilization processes.	Serp D, von Stockar U, Marison IW	J Food Prot	10.4315/0362-028x-65.7.1134	2002
	Molecular organization of intrinsic restriction and modification genes BsuM of Bacillus subtilis Marburg.	Ohshima H, Matsuoka S, Asai K, Sadaie Y	J Bacteriol	10.1128/JB.184.2.381-389.2002	2002
Enzymology	Evaluation of extracts of the root of Landolphia owerrience for antibacterial activity.	Okeke MI, Iroegbu CU, Eze EN, Okoli AS, Esimone CO	J Ethnopharmacol	10.1016/s0378-8741(01)00307-5	2001
Metabolism	Three distinct phases of isoprene formation during growth and sporulation of Bacillus subtilis.	Wagner WP, Nemecek-Marshall M, Fall R	J Bacteriol	10.1128/JB.181.15.4700-4703.1999	1999
Cultivation	The effectiveness of triclosan-incorporated plastic against bacteria on beef surfaces.	Cutter CN	J Food Prot	10.4315/0362-028x-62.5.474	1999
Metabolism	A UDP glucosyltransferase from Bacillus subtilis successively transfers up to four glucose residues to 1,2-diacylglycerol: expression of ypfP in Escherichia coli and structural analysis of its reaction products.	Jorasch P, Wolter FP, Zahringer U, Heinz E	Mol Microbiol	10.1046/j.1365-2958.1998.00930.x	1998
Metabolism	Acquisition of certain streptomycin-resistant (str) mutations enhances antibiotic production in bacteria.	Hosoya Y, Okamoto S, Muramatsu H, Ochi K	Antimicrob Agents Chemother	10.1128/AAC.42.8.2041	1998
Enzymology	Two malate dehydrogenases in Methanobacterium thermoautotrophicum.	Thompson H, Tersteegen A, Thauer RK, Hedderich R	Arch Microbiol	10.1007/s002030050612	1998
Enzymology	Cloning, sequencing, and disruption of the Bacillus subtilis psd gene coding for phosphatidylserine decarboxylase.	Matsumoto K, Okada M, Horikoshi Y, Matsuzaki H, Kishi T, Itaya M, Shibuya I	J Bacteriol	10.1128/JB.180.1.100-106.1998	1998
Enzymology	Purification and characterization of a glutamic-acid-specific endopeptidase from Bacillus subtilis ATCC 6051; application to the recovery of bioactive peptides from fusion proteins by sequence-specific digestion.	Okamoto H, Fujiwara T, Nakamura E, Katoh T, Iwamoto H, Tsuzuki H	Appl Microbiol Biotechnol	10.1007/s002530051010	1997
	Biological dosimetry of solar radiation for different simulated ozone column thicknesses.	Horneck G, Rettberg P, Rabbow E, Strauch W, Seckmeyer G, Facius R, Reitz G, Strauch K, Schott JU	J Photochem Photobiol B	10.1016/1011-1344(95)07219-5	1996
Metabolism	[The effect of growth media on recovery of test microorganisms after exposure to saturated steam under pressure].	Krzywicka H, Jakimiak B, Zarzycka E	Rocz Panstw Zakl Hig		1996
Enzymology	Characterization of a new cell-bound alpha-amylase in Bacillus subtilis 168 Marburg that is only immunologically related to the exocellular alpha-amylase.	Haddaoui E, Petit-Glatron MF, Chambert R	J Bacteriol	10.1128/jb.177.17.5148-5150.1995	1995
Enzymology	Identical amino acid sequence of the aroA(G) gene products of Bacillus subtilis 168 and B. subtilis Marburg strain.	Bolotin A, Khazak V, Stoynova N, Ratmanova K, Yomantas Y, Kozlov Y	Microbiology (Reading)	10.1099/13500872-141-9-2219	1995
Enzymology	[Allozyme variability in strains of soil bacilli related to Bacillus subtilis].	Lukin SA, Malinina TV, Prozorov AA	Genetika		1994
Pathogenicity	Biological activities of lipoteichoic acid and peptidoglycan-teichoic acid of Bacillus subtilis 168 (Marburg).	Himanen JP, Pyhala L, Olander RM, Merimskaya O, Kuzina T, Lysyuk O, Pronin A, Sanin A, Helander IM, Sarvas M	J Gen Microbiol	10.1099/00221287-139-11-2659	1993
Phylogeny	Isolation and characterization of the groES and groEL genes of Bacillus subtilis Marburg.	Tozawa Y, Yoshikawa H, Kawamura F, Itaya M, Takahashi H	Biosci Biotechnol Biochem	10.1271/bbb.56.1995	1992
Biotechnology	[Microbial growth in parenteral nutrition. II. Effects of osmolality].	Vilchez Medina T, Montero Herrero CG, Garcia Curiel A, Lluch Colomer A, Rodriguez Cobacho A, Atienza Fernandez M	Nutr Hosp		1990
Enzymology	Molecular cloning, nucleotide sequencing, and expression of the Bacillus subtilis (natto) IAM1212 alpha-amylase gene, which encodes an alpha-amylase structurally similar to but enzymatically distinct from that of B. subtilis 2633.	Emori M, Takagi M, Maruo B, Yano K	J Bacteriol	10.1128/jb.172.9.4901-4908.1990	1990
Enzymology	Comparison of the three aspartokinase isozymes in Bacillus subtilis Marburg and 168.	Zhang JJ, Hu FM, Chen NY, Paulus H	J Bacteriol	10.1128/jb.172.2.701-708.1990	1990
Biotechnology	Effect of heat and ultrasonic waves on the survival of two strains of Bacillus subtilis.	Garcia ML, Burgos J, Sanz B, Ordonez JA	J Appl Bacteriol	10.1111/j.1365-2672.1989.tb02535.x	1989
Enzymology	[A microbial growth study in parenteral nutrition].	Vilchez Medina T, Montero Herrero CG, Garcia Curiel A, Atienza Fernandez M	Nutr Hosp		1989
Enzymology	Nucleotide sequence of the chromosomal gene coding for the aminoglycoside 6-adenylyltransferase from Bacillus subtilis Marburg 168.	Ohmiya K, Tanaka T, Noguchi N, O'Hara K, Kono M	Gene	10.1016/0378-1119(89)90241-2	1989
Enzymology	DNA methyltransferase of Bacillus subtilis Marburg: purification, properties and further evidence of specificity.	Guha S	Gene	10.1016/0378-1119(88)90256-9	1988
Genetics	Nucleotide sequence homology of the tetracycline-resistance determinant naturally maintained in Bacillus subtilis Marburg 168 chromosome and the tetracycline-resistance gene of B. subtilis plasmid pNS1981.	Sakaguchi R, Amano H, Shishido K	Biochim Biophys Acta	10.1016/0167-4781(88)90142-x	1988
Enzymology	Molecular cloning of a tetracycline-resistance determinant from Bacillus subtilis chromosomal DNA and its expression in Escherichia coli and B. subtilis.	Sakaguchi R, Shishido K	Biochim Biophys Acta	10.1016/0167-4781(88)90053-x	1988
Genetics	Restriction and modification in Bacillus subtilis Marburg 168: target sites and effects on plasmid transformation.	Bron S, Janniere L, Ehrlich SD	Mol Gen Genet	10.1007/BF00338412	1988
Enzymology	The effect of restriction on shotgun cloning and plasmid stability in Bacillus subtilis Marburg.	Haima P, Bron S, Venema G	Mol Gen Genet	10.1007/BF00329663	1987
Pathogenicity	Toxicity of paraquat to microorganisms.	Carr RJ, Bilton RF, Atkinson T	Appl Environ Microbiol	10.1128/aem.52.5.1112-1116.1986	1986
Enzymology	Determination of DNA sequences containing methylcytosine in Bacillus subtilis Marburg.	Guha S	J Bacteriol	10.1128/jb.163.2.573-579.1985	1985
Cultivation	Simplified procedure for producing Bacillus subtilis spores for the Guthrie phenylketonuria and other microbiological screening tests.	Jinks DC, Guthrie R, Naylor EW	J Clin Microbiol	10.1128/jcm.21.5.826-829.1985	1985
Enzymology	The DNA sequence of the gene for the secreted Bacillus subtilis enzyme levansucrase and its genetic control sites.	Steinmetz M, Le Coq D, Aymerich S, Gonzy-Treboul G, Gay P	Mol Gen Genet	10.1007/BF00425427	1985
Genetics	Alterations in the number of rRNA operons within the Bacillus subtilis genome.	Gottlieb P, LaFauci G, Rudner R	Gene	10.1016/0378-1119(85)90233-1	1985
Metabolism	Effect of 5-azacytidine on DNA methylation and on the enzymes of de novo pyrimidine biosynthesis in Bacillus subtilis Marburg strain.	Guha S	Eur J Biochem	10.1111/j.1432-1033.1984.tb08527.x	1984
Metabolism	Initiation of antibiotic production by the stringent response of Bacillus subtilis Marburg.	Ochi K, Ohsawa S	J Gen Microbiol	10.1099/00221287-130-10-2473	1984
Enzymology	Cloning, sequencing, and secretion of Bacillus amyloliquefaciens subtilisin in Bacillus subtilis.	Wells JA, Ferrari E, Henner DJ, Estell DA, Chen EY	Nucleic Acids Res	10.1093/nar/11.22.7911	1983
Phylogeny	Isolation of a tetracycline-resistance plasmid excised from a chromosomal DNA sequence in Bacillus subtilis.	Shishido K, Noguchi N, Kim C, Ando T	Plasmid	10.1016/0147-619x(83)90036-7	1983
Metabolism	Peptidoglycan synthesis by partly autolyzed cells of Bacillus subtilis W23.	Harrington CR, Baddiley J	J Bacteriol	10.1128/jb.155.2.776-792.1983	1983
Enzymology	Teichoicase from Bacillus subtilis Marburg.	Kusser W, Fiedler F	J Bacteriol	10.1128/jb.155.1.302-310.1983	1983
Enzymology	[Genetic analysis of sacB, the structural gene of a secreted enzyme, levansucrase of Bacillus subtilis Marburg].	Steinmetz M, Le Coq D, Djemia HB, Gay P	Mol Gen Genet	10.1007/BF00330901	1983
Stress	Simple, inexpensive, and rapid way to produce Bacillus subtilis spores for the Guthrie bioassay.	Franklin ML, Clark WA	J Clin Microbiol	10.1128/jcm.14.1.113-115.1981	1981
Metabolism	Heat sensitization of bacterial spores after exposure to ethidium bromide, acriflavine, or daunomycin.	Hanlin JH, Cloutier MJ, Slepecky RA	Appl Environ Microbiol	10.1128/aem.42.1.79-82.1981	1981
Metabolism	Restriction and modification of bacteriophage SP10 DNA by Bacillus subtilis Marburg 168: stabilization of SP10 DNA in restricting hosts preinfected with a heterologous phage, SP18.	Witmer H, Franks M	J Virol	10.1128/JVI.37.1.148-155.1981	1981
Genetics	The cell cycle of Bacillus subtilis as studied by electron microscopy.	Nanninga N, Koppes LJ, de Vries-Tijssen FC	Arch Microbiol	10.1007/BF00446817	1979
Enzymology	Membrane-bound and soluble extracellular alpha-amylase from Bacillus subtilis.	Mantsala P, Zalkin H	J Biol Chem	S0021-9258(19)86926-0	1979
Enzymology	Purification and characterization of an endonuclease specific for single-stranded DNA from Bacillus subtilis Marburg.	Matsumoto K, Ando T, Saito H, Ikeda Y	J Biochem	10.1093/oxfordjournals.jbchem.a132566	1979
Enzymology	Intracellular serine proteinase of Bacillus subtilis strain Marburg 168. Comparison with the homologous enzyme from Bacillus subtilis strain A-50.	Strongin AY, Gorodetsky DI, Kuznetsova IA, Yanonis VV, Abramov ZT, Belyanova LP, Baratova LA, Stepanov VM	Biochem J	10.1042/bj1790333	1979
Phenotype	Host-controlled modification and restriction in Bacillus subtilis: Bsu 168-system and BsuR-system in B. subtilis 168.	Ikawa S, Shibata T, Ando T, Saito H	Mol Gen Genet	10.1007/BF00337786	1979
Phenotype	Mapping of genes determining nonpermissiveness and host-specific restriction to bacteriophages in Bacillus subtilis Marburg.	Saito H, Shibata T, Ando T	Mol Gen Genet	10.1007/BF00337785	1979
Metabolism	Control of teichoic acid synthesis during phosphate limitation.	Glaser L, Loewy A	J Bacteriol	10.1128/jb.137.1.327-331.1979	1979
Metabolism	Cell wall assembly in Bacillus subtilis: location of wall material incorporated during pulsed release of phosphate limitation, its accessibility to bacteriophages and concanavalin A, and its susceptibility to turnover.	Anderson AJ, Green RS, Sturman AJ, Archibald AR	J Bacteriol	10.1128/jb.136.3.886-899.1978	1978
Metabolism	Biochemical and genetic study of D-glucitol transport and catabolism in Bacillus subtilis.	Chalumeau H, Delobbe A, Gay P	J Bacteriol	10.1128/jb.134.3.920-928.1978	1978
Metabolism	Alkaline phosphatase possessing alkaline phosphodiesterase activity and other phosphodiesterases in Bacillus subtilis.	Yamane K, Maruo B	J Bacteriol	10.1128/jb.134.1.108-114.1978	1978
Phylogeny	Metabolic products of microorganisms 167. Cyclopaldic acid from Aspergillus duricaulis. 1. Production, isolation and bioloical properties.	Brillinger GU, Heberle W, Weber B, Achenbach H	Arch Microbiol	10.1007/BF00417847	1978
Enzymology	The phosphoenolpyruvate : methyl-alpha-d-glucoside phosphotransferase system in Bacillus subtilis Marburg : kinetic studies of enzyme ii and evidence for a phosphoryl enzyme ii intermediate.	Marquet M, Creignou MC, Dedonder R	Biochimie	10.1016/s0300-9084(79)80445-9	1978
Genetics	Construction of a kit of reference strains for rapid genetic mapping in Bacillus subtilis 168.	Dedonder RA, Lepesant JA, Lepesant-Kejzlarova J, Billault A, Steinmetz M, Kunst F	Appl Environ Microbiol	10.1128/aem.33.4.989-993.1977	1977
Phenotype	Restriction and modification in Bacillus species: genetic transformation of bacteria with DNA from different species, part I.	Uozumi T, Hoshino T, Miwa K, Horinouchi S, Beppu T, Arima K	Mol Gen Genet	10.1007/BF00264941	1977
Metabolism	Sodium effect of growth on aspartate and genetic analysis of a Bacillus subtilis mutant with high aspartase activity.	Iijima T, Diesterhaft MD, Freese E	J Bacteriol	10.1128/jb.129.3.1440-1447.1977	1977
Metabolism	RNA polymerase in vegetative cells of Bacillus subtilis. II. New polypeptide factors, FI and FII, stimulating in vitro RNA synthesis directed by phage M2 DNA.	Ikeda JE, Saito H	J Biochem	10.1093/oxfordjournals.jbchem.a131336	1976
Enzymology	RNA polymerase in vegetative cells of Bacillus subtilis. I. Purification and properties of RNA polymerase L1 and L2.	Ikeda JE, Saito H	J Biochem	10.1093/oxfordjournals.jbchem.a131335	1976
Metabolism	Changes in deoxyribonucleic acid polymerase activities in synthesis of deoxyribonucleic acid during sporulation of Bacillus subtilis.	Honjo M, Shibano Y, Komano T	J Bacteriol	10.1128/jb.128.1.221-227.1976	1976
Metabolism	Uptake and retention of metals by cell walls of Bacillus subtilis.	Beveridge TJ, Murray RG	J Bacteriol	10.1128/jb.127.3.1502-1518.1976	1976
Enzymology	Characterization of the N-acetylmuramic acid L-alanine amidase from Bacillus subtilis.	Lindsay B, Glaser L	J Bacteriol	10.1128/jb.127.2.803-811.1976	1976
Metabolism	Recombination-deficient mutants of Bacillus subtilis.	Sadaie Y, Kada T	J Bacteriol	10.1128/jb.125.2.489-500.1976	1976
Enzymology	The phosphoenolpyruvate : methyl-alpha-D-glucoside phosphotransferase system in Bacillus subtilis Marburg 168 : purification and identification of the phosphocarrier protein (HPr).	Marquet M, Creignou MC, Dedonder R	Biochimie	10.1016/s0300-9084(76)80254-4	1976
Metabolism	Isolation of 30S and 50S active ribosomal subunits of Bacillus subtilis, Marburg strain.	Guha S, Szulmajster J	J Bacteriol	10.1128/jb.124.3.1062-1066.1975	1975
Biotechnology	Mutation of Bacillus subtilis causing hyperproduction of alpha-amylase and protease, and its synergistic effect.	Yoneda Y, Maruo B	J Bacteriol	10.1128/jb.124.1.48-54.1975	1975
Enzymology	Interaction of N-acetylmuramic acid L-alanine amidase with cell wall polymers.	Herbold DR, Glaser L	J Biol Chem	S0021-9258(19)40933-2	1975
Enzymology	Bacillus subtilis N-acetylmuramic acid L-alanine amidase.	Herbold DR, Glaser L	J Biol Chem	S0021-9258(19)41746-8	1975
Metabolism	Existence of two alternative pathways for fructose and sorbitol metabolism in Bacillus subtilis Marburg.	Delobbe A, Chalumeau H, Gay P	Eur J Biochem	10.1111/j.1432-1033.1975.tb03950.x	1975
Enzymology	Identification of the structural gene of the PEP-phosphotransferase enzyme I in Bacillus subtilis Marburg.	Niaudet B, Gay P, Dedonder R	Mol Gen Genet	10.1007/BF00341718	1975
Pathogenicity	[Significance of the antibacterial agent assay of urine for bacteriological diagnosis and control of chemotherapy of urinary tract infections (author's transl)].	Ansorg R, Zappel H, Thomssen R	Zentralbl Bakteriol Orig A		1975
Enzymology	[Purification and properties of an esterase excreted during sporulation of Bacillus subtilis].	Mamas S, Millet J	Biochimie	10.1016/s0300-9084(75)80104-0	1975
Metabolism	Effect of pH on the proportions of polar lipids, in chemostat cultures of Bacillus subtilis.	Minnikin DE, Abdolrahimzadeh H	J Bacteriol	10.1128/jb.120.3.999-1003.1974	1974
Phylogeny	Transformation of Bacillus subtilis in alpha-amylase productivity by deoxyribonucleic acid from B. subtilis var. amylosacchariticus.	Yoneda Y, Yamane K, Yamaguchi K, Nagata Y, Maruo B	J Bacteriol	10.1128/jb.120.3.1144-1150.1974	1974
Metabolism	Genetic mapping in Bacillus subtilis by 5-bromouracil sensitization to ultraviolet inactivation of transforming activities.	Matsumoto K, Shibata T, Saito H	J Bacteriol	10.1128/jb.119.3.666-671.1974	1974
Enzymology	Genetic control of the rate of alpha-amylase synthesis in Bacillus subtilis.	Yamaguchi K, Nagata Y, Maruo B	J Bacteriol	10.1128/jb.119.2.410-415.1974	1974
Enzymology	Genetic and biochemical studies on cell-bound alpha-amylase in Bacillus subtilis Marburg.	Nagata Y, Yamaguchi K, Maruo B	J Bacteriol	10.1128/jb.119.2.425-430.1974	1974
Metabolism	Sensitivity of an early step in the sporulation of Bacillus subtilis to selective inhibition by ethidium bromide.	Rogolsky M, Nakamura HT	J Bacteriol	10.1128/jb.119.1.57-61.1974	1974
Metabolism	Teichoic acid synthesis in Bacillus stearothermophilus.	Kennedy LD	Biochem J	10.1042/bj1380525	1974
Pathogenicity	Ethidium bromide-resistant mutant of Bacillus subtilis.	Bishop PE, Brown LR	J Bacteriol	10.1128/jb.115.3.1077-1083.1973	1973
Pathogenicity	Genetic analysis of ribonucleic acid polymerase mutants of Bacillus subtilis.	Haworth SR, Brown LR	J Bacteriol	10.1128/jb.114.1.103-113.1973	1973
Metabolism	Transport alterations in a phosphatidylethanolamine-deficient mutant of Bacillus subtilis.	Beebe JL	J Bacteriol	10.1128/jb.109.2.939-942.1972	1972
Metabolism	Teichoic acid hydrolase activity in soil bacteria (Bacillus subtilis-sporulation-phosphodiesterase-polyamines-concanavalin A).	Wise EM Jr, Glickman RS, Teimer E	Proc Natl Acad Sci U S A	10.1073/pnas.69.1.233	1972
Phylogeny	Isolation and characterization of a phosphatidylethanolamine-deficient mutnt of Bacillus subtilis.	Beebe JL	J Bacteriol	10.1128/jb.107.3.704-711.1971	1971
Metabolism	Replacement sporulation of Bacillus subtilis 168 in a chemically defined medium.	Ramaley RF, Burden L	J Bacteriol	10.1128/jb.101.1.1-8.1970	1970
Pathogenicity	Length of deoxyribonucleic acid of PBSX-like particles of Bacillus subtilis induced by 4-nitroquinoline-1-oxide.	Hirokawa H, Kadlubar F	J Virol	10.1128/JVI.3.2.205-209.1969	1969
	Ratio of teichoic acid and peptidoglycan in cell walls of Bacillus subtilis following spire germination and during vegetative growth.	Boylen CW, Ensign JC	J Bacteriol	10.1128/jb.96.2.421-427.1968	1968
Metabolism	Separation of two functional roles of L-alanine in the initiation of Bacillus subtilis spore germination.	Wax R, Freese E, Cashel M	J Bacteriol	10.1128/jb.94.3.522-529.1967	1967
Cultivation	Sporulation mutations induced by heat in Bacillus subtilis.	Northrop J, Slepecky RA	Science	10.1126/science.155.3764.838	1967
Stress	Characterization of Bacillus subtilis bacteriophages.	Brodetsky AM, Romig WR	J Bacteriol	10.1128/jb.90.6.1655-1663.1965	1965
Metabolism	PATHWAYS OF GLUCOSE CATABOLISM IN BACILLUS SUBTILIS.	GOLDMAN M, BLUMENTHAL HJ	J Bacteriol	10.1128/jb.86.2.303-311.1963	1963
Metabolism	Expression of degQ gene and its effect on lipopeptide production as well as formation of secretory proteases in Bacillus subtilis strains.	Lilge L, Vahidinasab M, Adiek I, Becker P, Kuppusamy Nesamani C, Treinen C, Hoffmann M, Morabbi Heravi K, Henkel M, Hausmann R	Microbiologyopen	10.1002/mbo3.1241	2021
Metabolism	Molecular Biology of Bacillus subtilis Cytochromes anno 2020.	Hederstedt L	Biochemistry (Mosc)	10.1134/S0006297921010028	2021
Metabolism	The RapP-PhrP quorum-sensing system of Bacillus subtilis strain NCIB3610 affects biofilm formation through multiple targets, due to an atypical signal-insensitive allele of RapP.	Omer Bendori S, Pollak S, Hizi D, Eldar A	J Bacteriol	10.1128/JB.02382-14	2014
	A Whole-Cell Assay for Detection of Antibacterial Activity in Actinomycete Culture Supernatants.	Rutten A, Wohlleben W, Mitousis L, Musiol-Kroll EM	Methods Mol Biol	10.1007/978-1-0716-2855-3_2	2023
Phylogeny	Seven New Alkaloids Isolated from Marine Flavobacterium Tenacibaculum discolor sv11.	Wang L, Marner M, Mettal U, Liu Y, Schaberle TF	Mar Drugs	10.3390/md20100620	2022
	Systematic microscopical analysis reveals obligate synergy between extracellular matrix components during Bacillus subtilis colony biofilm development.	Porter M, Davidson FA, MacPhee CE, Stanley-Wall NR	Biofilm	10.1016/j.bioflm.2022.100082	2022
Transcriptome	Complete Genome Sequence Analysis of Bacillus subtilis Bbv57, a Promising Biocontrol Agent against Phytopathogens.	Thiruvengadam R, Gandhi K, Vaithiyanathan S, Sankarasubramanian H, Loganathan K, Lingan R, Rajagopalan VR, Muthurajan R, Ebenezer Iyadurai J, Kuppusami P	Int J Mol Sci	10.3390/ijms23179732	2022
Metabolism	Fatty Acid Synthesis Knockdown Promotes Biofilm Wrinkling and Inhibits Sporulation in Bacillus subtilis.	Arjes HA, Gui H, Porter R, Atolia E, Peters JM, Gross C, Kearns DB, Huang KC	mBio	10.1128/mbio.01388-22	2022
Genetics	Genome mining reveals polysaccharide-degrading potential and new antimicrobial gene clusters of novel intestinal bacterium Paenibacillus jilinensis sp. nov.	Ma K, Chen W, Yan SQ, Lin XQ, Liu ZZ, Zhang JB, Gao Y, Yang YJ.	BMC Genomics	10.1186/s12864-022-08623-4	2022
Genetics	Winogradskyella luteola sp.nov., Erythrobacter ani sp. nov., and Erythrobacter crassostrea sp.nov., isolated from the hemolymph of the Pacific Oyster Crassostrea gigas.	Pira H, Risdian C, Musken M, Schupp PJ, Wink J.	Arch Microbiol	10.1007/s00203-022-03099-y	2022
	Streptomonospora litoralis sp. nov., a halophilic thiopeptides producer isolated from sand collected at Cuxhaven beach.	Khodamoradi S, Hahnke RL, Mast Y, Schumann P, Kampfer P, Steinert M, Ruckert C, Surup F, Rohde M, Wink J.	Antonie Van Leeuwenhoek	10.1007/s10482-021-01609-4	2021
	Unprecedented Antimicrobial and Cytotoxic Polyketides from Cultures of Diaporthe africana sp. nov.	Matio Kemkuignou B, Lambert C, Stadler M, Kouam Fogue S, Marin-Felix Y.	J Fungi (Basel)	10.3390/jof9070781	2023
	Characterization of Bioactivities and Biosynthesis of Angucycline/Angucyclinone Derivatives Derived from Gephyromycinifex aptenodytis gen. nov., sp. nov.	Zhu WZ, Wang SH, Gao HM, Ge YM, Dai J, Zhang XL, Yang Q.	Mar Drugs	10.3390/md20010034	2021
Phylogeny	Identification of four novel Streptomyces isolated from machair grassland soil using a culture-based bioprospecting strategy: Streptomyces caledonius sp. nov., Streptomyces machairae sp. nov., Streptomyces pratisoli sp. nov. and Streptomyces achmelvichensis sp. nov.	Prole JR, Allenby N, Manning DAC, Goodfellow M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006736	2025
Metabolism	The growth of Steroidobacter agariperforans sp. nov., a novel agar-degrading bacterium isolated from soil, is enhanced by the diffusible metabolites produced by bacteria belonging to Rhizobiales.	Sakai M, Hosoda A, Ogura K, Ikenaga M.	Microbes Environ	10.1264/jsme2.me13169	2014
Genetics	Bacillus ayatagriensis sp. nov., a novel plant growth-promoting rhizobacteria strain isolated from mulberry rhizosphere.	Das S, Mondal R, Mandal P, Kurt H, Chakraborty J, Islam MM, Sarkar B, Shaw S, Manna S, Arabaci N, Jangid K, Sadat A, Gangopadhyay D, Kati A, Mandal AK.	Sci Rep	10.1038/s41598-025-05508-w	2025
	Characterization and Potential Applications of a Selenium Nanoparticle Producing and Nitrate Reducing Bacterium Bacillus oryziterrae sp. nov.	Bao P, Xiao KQ, Wang HJ, Xu H, Xu PP, Jia Y, Haggblom MM, Zhu YG.	Sci Rep	10.1038/srep34054	2016
	Description of Catenibacterium mitsuokai subsp. tridentinum subsp. nov., an anaerobic bacterium isolated from human faeces, and emended description of C. mitsuokai	Ricci L, Selma-Royo M, Golzato D, Servais C, Nabinejad A, Marchi P, Puncochar M, Trenti F, Garcia-Aloy M, Armanini F, Marconi R, Asnicar F, Pinto F, Guella G, Tamburini S, Segata N.	Int J Syst Evol Microbiol		2025
Phylogeny	Genome-based classification of Calidifontibacillus erzurumensis gen. nov., sp. nov., isolated from a hot spring in Turkey, with reclassification of Bacillus azotoformans as Calidifontibacillus azotoformans comb. nov. and Bacillus oryziterrae as Calidifontibacillus oryziterrae comb. nov.	Adiguzel A, Ay H, Baltaci MO, Akbulut S, Albayrak S, Omeroglu MA	Int J Syst Evol Microbiol	10.1099/ijsem.0.004549	2020
Phylogeny	Reclassification of Bacillus saliphilus as Alkalicoccus saliphilus gen. nov., comb. nov., and description of Alkalicoccus halolimnae sp. nov., a moderately halophilic bacterium isolated from a salt lake.	Zhao B, Lu W, Zhang S, Liu K, Yan Y, Li J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001759	2017
Phylogeny	Salipaludibacillus aurantiacus gen. nov., sp. nov. a novel alkali tolerant bacterium, reclassification of Bacillus agaradhaerens as Salipaludibacillus agaradhaerens comb. nov. and Bacillus neizhouensis as Salipaludibacillus neizhouensis comb. nov.	Sultanpuram VR, Mothe T	Int J Syst Evol Microbiol	10.1099/ijsem.0.001117	2016
Phylogeny	Salibacterium halotolerans gen. nov., sp. nov., a bacterium isolated from a salt pan, reclassification of Bacillus qingdaonensis as Salibacterium qingdaonense comb. nov. and Bacillus halochares as Salibacterium halochares comb. nov.	Vishnuvardhan Reddy S, Thirumala M, Sasikala C, Venkata Ramana C	Int J Syst Evol Microbiol	10.1099/ijsem.0.000572	2015
Phylogeny	Bacillus oryzaecorticis sp. nov., a moderately halophilic bacterium isolated from rice husks.	Hong SW, Kwon SW, Kim SJ, Kim SY, Kim JJ, Lee JS, Oh MH, Kim AJ, Chung KS	Int J Syst Evol Microbiol	10.1099/ijs.0.058768-0	2014
Phylogeny	Alteribacillus bidgolensis gen. nov., sp. nov., a moderately halophilic bacterium from a hypersaline lake, and reclassification of Bacillus persepolensis as Alteribacillus persepolensis comb. nov.	Didari M, Amoozegar MA, Bagheri M, Schumann P, Sproer C, Sanchez-Porro C, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.034173-0	2012
Phylogeny	Bacillus siamensis sp. nov., isolated from salted crab (poo-khem) in Thailand.	Sumpavapol P, Tongyonk L, Tanasupawat S, Chokesajjawatee N, Luxananil P, Visessanguan W	Int J Syst Evol Microbiol	10.1099/ijs.0.018879-0	2009

References

#2017	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#36567	; Curators of the CIP;
#44121	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 163 B
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67772	The University of Coimbra Bacteria Culture Collection (UCCCB) ; Curators of the UCCCB;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123359	Collection of Institut Pasteur ; Curators of the CIP; CIP 52.65
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Bacillus subtilis (DSM 10, ATCC 6051, CCM 2216)

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