Name: Bacillus subtilis DSM 1088
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 962

Type strain:

Species: Bacillus subtilis

Culture col. no.: DSM 1088, IFO 13169, NBRC 13169, OUT 8353

Strain history: <- OUT, 8353 <- IFO <- S. Yamauchi (Bacillus natto)

NCBI tax ID(s): 1423 (species)

SI-ID 47322

DSM 1088, IFO 13169, CCRC14716, NBRC 13169, BCRC 14716, NRRL B-14200

Other strains from Bacillus subtilis

Section

Bacillus subtilis DSM 1088 is a mesophilic human pathogen of the family Bacillaceae.

human pathogen
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Bacillus*
	Species	**Bacillus subtilis**
	Full Scientific Name (LPSN)	Bacillus subtilis (Ehrenberg 1835) Cohn 1872 (Approved Lists 1980)

Synonym

"Vibrio subtilis"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #500]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #500]

Culture medium growth

[Ref.: #500]

Culture medium link

Medium recipe at MediaDive

[Ref.: #500]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #500]			growth	30 °C

[Ref.: #500]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #500]	Geographic location (country and/or sea, region)	From natto
[Ref.: #500]	Country	Japan
[Ref.: #500]	Country ISO 3 Code	JPN
[Ref.: #500]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence HQ231914 (>99% sequence identity) for Bacillus from Microbeatlas

Aquatic Samples	2854
Soil Samples	3768
Animal Samples	9674
Plant Samples	1905
Total Samples	18201

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #500]	Pathogenicity (human)	yes, in single cases
[Ref.: #500]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Bacillus subtilis gene for 16S rRNA, partial sequence, strain: NBRC 13169	AB680377	1475	ENA	1423 tax ID	*
[Ref.: #20218]	Bacillus subtilis subsp. subtilis strain MPA 1035 16S ribosomal RNA gene, partial sequence	HQ231914	1447	ENA	135461 tax ID	*

Availability in culture collections External links

[Ref.: #500]

Culture collection no.

DSM 1088, IFO 13169, NBRC 13169, OUT 8353

[Ref.: #70635]

SI-ID 47322

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Isolation and characterization of four types of plasmids from Bacillus subtilis (natto).	Tanaka T, Koshikawa T	J Bacteriol	10.1128/jb.131.2.699-701.1977	1977	*

References

#500	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1088

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#70635

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47322.1 )

* These data were automatically processed and therefore are not curated

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