Name: Streptomyces sp. JCM 30923
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163903

Type strain:

Species: Streptomyces sp.

Culture col. no.: JCM 30923

Strain history: N. Nakaew; Dept. of Microbiol. & Parasitol., Fac. of Med. Sci., Naresuan Univ., Thailand; TM32.

NCBI tax ID(s): 1931 (species)

Special Collections

Other strains from Streptomyces sp.

Section

Streptomyces sp. JCM 30923 is a spore-forming bacterium that was isolated from Rhizospheric soils of turmeric .

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Full Scientific Name (LPSN)	Streptomyces Waksman and Henrici 1943 (Approved Lists 1980)

	Synonym	"Microechinospora"
	Synonym	Carbonactinospora
	Synonym	Actinosporangium
	Synonym	Actinopycnidium
	Synonym	Elytrosporangium
	Synonym	Streptoverticillium
	Synonym	Chainia
	Synonym	"Indiella"
	Synonym	Actinacidiphila
	Synonym	Kitasatoa
	Synonym	Microellobosporia

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

aerobe Confidence in %92.899

[Ref.: #67770]

Observation

Suppression of white root disease caused by Rigidoporus sp. in rubber trees

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Rhizospheric soils of turmeric (Curcuma longa)
[Ref.: #67770]	Host species	Curcuma longa
[Ref.: #67770]	Country	Thailand
[Ref.: #67770]	Country ISO 3 Code	THA
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces sp. TM32 16S ribosomal RNA gene, partial sequence	KR534214	1452	GenBank ENA	1652669 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces sp. TM32	GCA_004122755	contig	GenBank ENA	1652669 tax ID

[Ref.: #67770]

GC-content

71.39 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces sp. TM32 TM32 NCBI: GCA_004122755.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	89.161	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.286	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	92.899	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	88.557	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.5	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 30923

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Streptomyces sp. TM32 TM32

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