Name: Streptomyces sp. DSM 40532
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15695

Type strain:

Species: Streptomyces sp.

Culture col. no.: DSM 40532, ATCC 27460, CBS 736.72, IFO 13435, ISP 5532, NBRC 13435, NRRL 3151, RIA 1396, JCM 4819, RIA 1936, VKM Ac-750

Strain history: KCC S-0819 <-- IFO 13435 <-- SAJ <-- ISP 5532 <-- NRRL 3151 <-- Upjohn Co., USA.

NCBI tax ID(s): 1931 (species)

SI-ID 39013

ATCC 27460, IFO 13435, DSM 40532, NRRL 3151, JCM 4819, VKM Ac-750, NRRL B-3151, CBS 736.72, NBRC 13435, BCRC 15190, CCRC 15190

Special Collections

DSMZ
JCM

Other strains from Streptomyces sp.

Section

Streptomyces sp. DSM 40532 is a spore-forming, Gram-positive bacterium of the family Streptomycetaceae.

Gram-positive
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Full Scientific Name (LPSN)	Streptomyces Waksman and Henrici 1943 (Approved Lists 1980)

	Synonym	"Microechinospora"
	Synonym	Carbonactinospora
	Synonym	Actinosporangium
	Synonym	Actinopycnidium
	Synonym	Elytrosporangium
	Synonym	Streptoverticillium
	Synonym	Chainia
	Synonym	"Indiella"
	Synonym	Actinacidiphila
	Synonym	Kitasatoa
	Synonym	Microellobosporia

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %90.859

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9621]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9621]

Culture medium growth

[Ref.: #9621]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9621]

Culture medium composition

expand / minimize

[Ref.: #9621]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #9621]

Culture medium growth

[Ref.: #9621]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9621]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

aerobe Confidence in %90.133

[Ref.: #69480]	Ability of spore formation	yes Confidence in %92.212
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence AB184400 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	44
Soil Samples	755
Animal Samples	39
Plant Samples	300
Total Samples	1138

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces regalis gene for 16S rRNA, partial sequence, strain: NBRC 13435	AB184400	1477	GenBank ENA	68262 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces regalis NRRL 3151	GCA_001509475	contig	GenBank ENA	68262 tax ID
[Ref.: #66792]	Streptomyces regalis strain NRRL 3151	68262.3	wgs	PATRIC	68262 tax ID	*
[Ref.: #66792]	Streptomyces regalis NRRL 3151	2767802101	draft	JGI IMG/M	68262 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces regalis strain NRRL 3151 PATRIC: 68262.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces regalis strain NRRL 3151 PATRIC: 68262.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	90.859	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.867	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	92.212	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	90.133	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	87	no

Availability in culture collections External links

[Ref.: #9621]

Culture collection no.

DSM 40532, ATCC 27460, CBS 736.72, IFO 13435, ISP 5532, NBRC 13435, NRRL 3151, RIA 1396, JCM 4819, RIA 1936, VKM Ac-750

[Ref.: #84781]

SI-ID 39013

References

#9621

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40532

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84781

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID39013.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces regalis strain NRRL 3151

Streptomyces regalis strain NRRL 3151

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Change proposal