Name: Streptomyces pristinaespiralis 5647
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15657

Type strain:

Species: Streptomyces pristinaespiralis

Strain Designation: 5647

Culture col. no.: DSM 40338, ATCC 25486, CBS 914.69, IFO 13074, ISP 5338, JCM 4507, NBRC 13074, NRRL 2958, RIA 1266, BCRC 12096, CGMCC 4.1352

Strain history: KCC S-0507 <-- IFO 13074 <-- SAJ <-- ISP 5338 <-- NRRL 2958 <-- Rhône-Poulenc 5647.

NCBI tax ID(s): 1931 (species)

SI-ID 44720

ATCC 25486, IFO 13074, NRRL 2958, DSM 40338, JCM 4507, CCRC 12096, NRRL B-2958, CBS 914.69, AS 4.1352, NBRC 13074, BCRC 12096, CGMCC 4.1352

Section

Streptomyces pristinaespiralis 5647 is a spore-forming, mesophilic, Gram-positive bacterium that produces antibiotic compounds.

antibiotic compound production
Gram-positive
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	"Streptomyces pristinaespiralis"
	Full Scientific Name (LPSN)	Streptomyces pristinaespiralis Mancy et al. 1969

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

Multimedia content

[Ref.: #9470]

Caption:

Medium 65 28°C

[Ref.: #9470]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9470]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9470]

Culture medium growth

[Ref.: #9470]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9470]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9470]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9470]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %96
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #9470]

Name of produced compound

pristinamycin

	Metabolite production	Metabolite	Production
[Ref.: #67770]		pristinamycin ChEBI	yes

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces pristinaespiralis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4507	D44197	120	ENA	38300 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces pristinaespiralis ATCC 25486	GCA_000154945	chromosome	GenBank	457429 tax ID	*
[Ref.: #66792]	Streptomyces pristinaespiralis ATCC 25486	457429.3	wgs	PATRIC	457429 tax ID	*
[Ref.: #66792]	Streptomyces pristinaespiralis strain HCCB 10218	38300.4	complete	PATRIC	38300 tax ID	*
[Ref.: #66792]	Streptomyces pristinaespiralis ATCC 25486	648861016	draft	JGI IMG/M	457429 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces pristinaespiralis strain HCCB 10218 PATRIC: 38300.4
[Ref.: #69481]	spore-forming	yes	96	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces pristinaespiralis strain HCCB 10218 PATRIC: 38300.4
[Ref.: #69480]	gram-positive	yes	90.023	no
[Ref.: #69480]	anaerobic	no	99.179	no
[Ref.: #69480]	halophile	no	90.879	no
[Ref.: #69480]	spore-forming	yes	95.529	no
[Ref.: #69480]	glucose-util	yes	89.372	no
[Ref.: #69480]	aerobic	yes	93.475	no
[Ref.: #69480]	motile	no	93.602	no
[Ref.: #69480]	flagellated	no	97.889	no
[Ref.: #69480]	thermophile	no	98.958	yes
[Ref.: #69480]	glucose-ferment	no	89.547	no

Availability in culture collections External links

[Ref.: #9470]

Culture collection no.

DSM 40338, ATCC 25486, CBS 914.69, IFO 13074, ISP 5338, JCM 4507, NBRC 13074, NRRL 2958, RIA 1266, BCRC 12096, CGMCC 4.1352

[Ref.: #84743]

SI-ID 44720

References

#9470

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40338

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84743

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID44720.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Streptomyces sp. in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Streptomyces pristinaespiralis strain HCCB 10218

Streptomyces pristinaespiralis strain HCCB 10218

Change proposal

Change proposal