Name: Pseudomonas aeruginosa JCM 20079
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162733

Type strain:

Species: Pseudomonas aeruginosa

Culture col. no.: JCM 20079, IAM 1156, IFO 3446, NBRC 3446, OUT 8228

Strain history: IAM 1156 <-- IFO 3446 <-- RIMD, MK.

NCBI tax ID(s): 287 (species)

SI-ID 46572

ATCC 21036, IFO 3446, NBRC 3446, IAM 1156, JCM 20079

Special Collections

Other strains from Pseudomonas aeruginosa

Section

Pseudomonas aeruginosa JCM 20079 is a bacterium that was isolated from Urine.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Species	**Pseudomonas aeruginosa**
	Full Scientific Name (LPSN)	Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

Synonym

"Bacterium aeruginosum"

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Urine
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB680078 (>99% sequence identity) for Pseudomonas aeruginosa from Microbeatlas

Aquatic Samples	5046
Soil Samples	1669
Animal Samples	14748
Plant Samples	1294
Total Samples	22757

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pseudomonas aeruginosa gene for 16S rRNA, partial sequence, strain: NBRC 3446	AB680078	1461	GenBank ENA	287 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 20079, IAM 1156, IFO 3446, NBRC 3446, OUT 8228

[Ref.: #113555]

SI-ID 46572

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#113555

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID46572.1 )

* These data were automatically processed and therefore are not curated

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