Name: Pseudomonas aeruginosa MW3a
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 131881

Type strain:

Species: Pseudomonas aeruginosa

Strain Designation: MW3a

Culture col. no.: DSM 100465

Strain history: <- X. Y. Chan, Quorum Sensing Lab, Univ. of Malaya, Kuala Lumpur, Malaysia; MW3a <- C.-S. Chong, Univ. of Malaya, Division of Genetics and Molecular Biology, Kuala Lumpur, Malaysia

NCBI tax ID(s): 287 (species)

SI-ID 405450

DSM 100465

Other strains from Pseudomonas aeruginosa

Section

Pseudomonas aeruginosa MW3a is a mesophilic human pathogen that was isolated from seawater from 5 cm beneath sea level.

human pathogen
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Species	**Pseudomonas aeruginosa**
	Full Scientific Name (LPSN)	Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)

Synonym

"Bacterium aeruginosum"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23673]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #23673]

Culture medium growth

[Ref.: #23673]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23673]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23673]			growth	37 °C

[Ref.: #23673]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23673]

Name of produced compound

N acyl homoserine lactones

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	+	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	+	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	+	3.5.3.6	* from API 20NE
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE
[Ref.: #68369]	gelatinase	+		* from API 20NE
[Ref.: #68369]	urease	+	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #23673]	23422	+	-	-	+	+	-	+	-	+	-	-	+	-	-	+	+	+	+	+	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23673]	Sample type/isolated from	seawater from 5 cm beneath sea level
[Ref.: #23673]	Geographic location (country and/or sea, region)	Strait of Malacca
[Ref.: #23673]	Country	Malaysia
[Ref.: #23673]	Country ISO 3 Code	MYS
[Ref.: #23673]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #23673]	Pathogenicity (human)	yes
[Ref.: #23673]	Pathogenicity (animal)	yes
[Ref.: #23673]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudomonas aeruginosa MW3a	GCA_000590905	contig	GenBank	1449980 tax ID	*
[Ref.: #66792]	Pseudomonas aeruginosa MW3a	1449980.3	wgs	PATRIC	1449980 tax ID	*
[Ref.: #66792]	Pseudomonas aeruginosa MW3a	2579779000	draft	JGI IMG/M	1449980 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudomonas aeruginosa MW3a PATRIC: 1449980.3
[Ref.: #69480]	motile	yes	89.426	no
[Ref.: #69480]	gram-positive	no	98.471	no
[Ref.: #69480]	anaerobic	no	98.372	no
[Ref.: #69480]	halophile	no	91.881	no
[Ref.: #69480]	spore-forming	no	92.51	no
[Ref.: #69480]	glucose-util	yes	89.871	yes
[Ref.: #69480]	thermophile	no	99.782	yes
[Ref.: #69480]	aerobic	yes	92.786	no
[Ref.: #69480]	flagellated	yes	82.466	no
[Ref.: #69480]	glucose-ferment	no	90.44	yes

Availability in culture collections External links

[Ref.: #23673]

Culture collection no.

DSM 100465

[Ref.: #90269]

SI-ID 405450

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23673

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100465

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68369

Automatically annotated from API 20NE .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#90269

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405450.1 )

* These data were automatically processed and therefore are not curated

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