Pseudomonas aeruginosa 6816/1955-232 is a mesophilic prokaryote of the family Pseudomonadaceae.
mesophilic genome sequence| @ref 20215 |
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|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Pseudomonadaceae |
| Genus Pseudomonas |
| Species Pseudomonas aeruginosa |
| Full scientific name Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980) |
| Synonyms (2) |
| @ref | Motility | Confidence | |
|---|---|---|---|
| 125438 | 90.5 |
| @ref | Name | Growth | Composition | Medium link | |
|---|---|---|---|---|---|
| 34788 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 34788 | CIP Medium 3 | Medium recipe at CIP |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 34788 | positive | growth | 30 | mesophilic |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 34788 | 2 | Risk group (French classification) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 92.90 | no |
| 125439 | motility | BacteriaNetⓘ | no | 75.30 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 79.20 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 96.60 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 85.91 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 89.84 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 86.30 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.44 | yes |
| 125438 | aerobic | aerobicⓘ | no | 96.55 | no |
| 125438 | flagellated | motile2+ⓘ | no | 90.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Enzymology | Capillary electrophoresis-single-strand conformation polymorphism analysis for rapid identification of Pseudomonas aeruginosa and other gram-negative nonfermenting bacilli recovered from patients with cystic fibrosis. | Ghozzi R, Morand P, Ferroni A, Beretti JL, Bingen E, Segonds C, Husson MO, Izard D, Berche P, Gaillard JL. | J Clin Microbiol | 10.1128/jcm.37.10.3374-3379.1999 | 1999 | |
| Avirulent Pseudomonas aeruginosa T3SS-negative strains belonging to Clade 5 produce variable quantities of secondary metabolites. | Garcia-Reyes S, Rusniok C, Robert-Genthon M, Faudry E, Gomez-Valero L, Chenal-Francisque V, Guyon L, Caspar Y, Soberon Chavez G, Buchrieser C, Attree I. | Microlife | 10.1093/femsml/uqaf019 | 2025 | ||
| Enzymology | A New Micromonospora Strain with Antibiotic Activity Isolated from the Microbiome of a Mid-Atlantic Deep-Sea Sponge. | Back CR, Stennett HL, Williams SE, Wang L, Ojeda Gomez J, Abdulle OM, Duffy T, Neal C, Mantell J, Jepson MA, Hendry KR, Powell D, Stach JEM, Essex-Lopresti AE, Willis CL, Curnow P, Race PR. | Mar Drugs | 10.3390/md19020105 | 2021 | |
| Metabolism | lfnA from Pseudomonas aeruginosa O12 and wbuX from Escherichia coli O145 encode membrane-associated proteins and are required for expression of 2,6-dideoxy-2-acetamidino-L-galactose in lipopolysaccharide O antigen. | King JD, Mulrooney EF, Vinogradov E, Kneidinger B, Mead K, Lam JS. | J Bacteriol | 10.1128/jb.01708-07 | 2008 | |
| Metabolism | Evidence that WapB is a 1,2-glucosyltransferase of Pseudomonas aeruginosa involved in Lipopolysaccharide outer core biosynthesis. | Kocincova D, Hao Y, Vinogradov E, Lam JS. | J Bacteriol | 10.1128/jb.00032-11 | 2011 | |
| Protection against experimental Pseudomonas aeruginosa infection by recombinant P. aeruginosa lipoprotein I expressed in Escherichia coli. | Finke M, Duchene M, Eckhardt A, Domdey H, von Specht BU. | Infect Immun | 10.1128/iai.58.7.2241-2244.1990 | 1990 | ||
| Enzymology | Isolation and characterization of monoclonal antibodies against alkaline phosphatase of Pseudomonas aeruginosa. | Husson MO, Mielcarek C, Gavini F, Caron C, Izard D, Leclerc H. | J Clin Microbiol | 10.1128/jcm.27.5.1115-1118.1989 | 1989 | |
| Prevalence of gca, a gene involved in synthesis of A-band common antigen polysaccharide in Pseudomonas aeruginosa. | Currie HL, Lightfoot J, Lam JS. | Clin Diagn Lab Immunol | 10.1128/cdli.2.5.554-562.1995 | 1995 | ||
| Phage display and bacterial expression of a recombinant Fab specific for Pseudomonas aeruginosa serotype O6 lipopolysaccharide. | Tout NL, Lam JS. | Clin Diagn Lab Immunol | 10.1128/cdli.4.2.147-155.1997 | 1997 | ||
| Molecular cloning of genes involved with expression of A-band lipopolysaccharide, an antigenically conserved form, in Pseudomonas aeruginosa. | Lightfoot J, Lam JS. | J Bacteriol | 10.1128/jb.173.18.5624-5630.1991 | 1991 | ||
| TH1 cells trigger tumor necrosis factor alpha-mediated hypersensitivity to Pseudomonas aeruginosa after adoptive transfer into SCID mice. | Fruh R, Blum B, Mossmann H, Domdey H, von Specht BU. | Infect Immun | 10.1128/iai.63.3.1107-1112.1995 | 1995 | ||
| Monoclonal antibodies that distinguish inner core, outer core, and lipid A regions of Pseudomonas aeruginosa lipopolysaccharide. | de Kievit TR, Lam JS. | J Bacteriol | 10.1128/jb.176.23.7129-7139.1994 | 1994 | ||
| Production and characterization of monoclonal antibodies against serotype strains of Pseudomonas aeruginosa. | Lam JS, MacDonald LA, Lam MY, Duchesne LG, Southam GG. | Infect Immun | 10.1128/iai.55.5.1051-1057.1987 | 1987 | ||
| Protection of immunocompromised mice against lethal infection with Pseudomonas aeruginosa by active or passive immunization with recombinant P. aeruginosa outer membrane protein F and outer membrane protein I fusion proteins. | von Specht BU, Knapp B, Muth G, Broker M, Hungerer KD, Diehl KD, Massarrat K, Seemann A, Domdey H. | Infect Immun | 10.1128/iai.63.5.1855-1862.1995 | 1995 | ||
| Enzymology | Pseudomonas aeruginosa outer membrane lipoprotein I gene: molecular cloning, sequence, and expression in Escherichia coli. | Duchene M, Barron C, Schweizer A, von Specht BU, Domdey H. | J Bacteriol | 10.1128/jb.171.8.4130-4137.1989 | 1989 | |
| Enzymology | Monoclonal antibodies against Pseudomonas aeruginosa outer membrane antigens: isolation and characterization. | Hancock RE, Wieczorek AA, Mutharia LM, Poole K. | Infect Immun | 10.1128/iai.37.1.166-171.1982 | 1982 | |
| Sequence and transcriptional start site of the Pseudomonas aeruginosa outer membrane porin protein F gene. | Duchene M, Schweizer A, Lottspeich F, Krauss G, Marget M, Vogel K, von Specht BU, Domdey H. | J Bacteriol | 10.1128/jb.170.1.155-162.1988 | 1988 | ||
| High-density transposon libraries utilising outward-oriented promoters identify mechanisms of action and resistance to antimicrobials. | Coward C, Dharmalingham G, Abdulle O, Avis T, Beisken S, Breidenstein E, Carli N, Figueiredo L, Jones D, Khan N, Malara S, Martins J, Nagalingam N, Turner K, Wain J, Williams D, Powell D, Mason C. | FEMS Microbiol Lett | 10.1093/femsle/fnaa185 | 2020 | ||
| Pathogenicity | Machine learning-powered antibiotics phenotypic drug discovery. | Zoffmann S, Vercruysse M, Benmansour F, Maunz A, Wolf L, Blum Marti R, Heckel T, Ding H, Truong HH, Prummer M, Schmucki R, Mason CS, Bradley K, Jacob AI, Lerner C, Araujo Del Rosario A, Burcin M, Amrein KE, Prunotto M. | Sci Rep | 10.1038/s41598-019-39387-9 | 2019 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #34788 | Collection of Institut Pasteur ; Curators of the CIP; CIP 59.45 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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