Name: Clostridium sp. DSM 2634
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2674

Type strain:

Species: Clostridium sp.

Culture col. no.: DSM 2634, ATCC 13726

Strain history: <- ATCC <- J.K. Hardman ("Clostridium aminobutyricum")

NCBI tax ID(s): 1506 (species)

SI-ID 47648

DSM 2634, ATCC 13726, BCRC 14466, CCRC 14466

Other strains from Clostridium sp.

C. sp. London, DSM 3268
C. sp. Guariba, DSM 4685
C. sp. C1, DSM 12136
C. sp. AAM-1, DSM 10156
C. sp. KN-18, DSM 523, IFO 3353, NBRC ...
C. sp. M55, DSM 754, ATCC 13732
C. sp. DSM 1786, ATCC 25772, VPI 2461
C. sp. DSM 1975
C. sp. BAFF C3, S5, DSM 1985
C. sp. RB-9, DSM 2575, ATCC 39252
C. sp. KN245, DSM 5671
C. sp. 2b, DSM 5905, BKM B-1371, VKM B-1371
C. sp. 4, DSM 5906, BKM B-1364, VKM B-1364
C. sp. 1a, DSM 5907, BKM B-1360, VKM B-1360
C. sp. 11-2, 248 UNSW 047500, DSM 6646, ...
C. sp. 13-1, 248 UNSW 052700, DSM 6647, ...
C. sp. FS23, DSM 6876
C. sp. FS41, DSM 6877
C. sp. EV4, DSM 8245
C. sp. B6405, DSM 8431, ATCC 49440
C. sp. M5a3, DSM 10510
C. sp. KNNDS, DSM 10612
C. sp. DSM 10643, LIP 1
C. sp. 19gly4, DSM 11261
C. sp. A22b, DSM 11322, IAM 19228, JCM ...
C. sp. C8, DSM 11329, IAM 19232, JCM 7847
C. sp. 240-00, 296K/00, DSM 13576
C. sp. PXYL1, DSM 15427
C. sp. DSM 15346, ARC ArC5, ARC 5
C. sp. ID02-1354, TDO, DSM 15348
C. sp. ZIRB-1, DSM 15498
C. sp. EDB2, DSM 17592
C. sp. H1, DSM 46282, IMET 10868
C. sp. KO PS 7, DSM 30835
C. sp. DSM 7072, MCM B 501
C. sp. ZAQ-1, ZAQ-1A, DSM 15728
C. sp. 17cr1, DSM 16654
C. sp. BA-1, DSM 16988, MBIC 6483
C. sp. Mg50, DSM 17284
C. sp. RM-4, DSM 17699
C. sp. 14F, DSM 17811, VKM B-2368
C. sp. K311, DSM 19740
C. sp. Sanger 132, Sanger_132, DSM 102147
C. sp. U42, DSM 21318, NBRC 103937
C. sp. DSM 22005, USBA 49
C. sp. 6/1/45, DSM 24810, BEI HM-180
C. sp. 6/1/30, DSM 24813, BEI HM-173
C. sp. CCUG 7153
C. sp. CCUG 21842
C. sp. CCUG 21843
C. sp. CCUG 21844
C. sp. CCUG 31375
C. sp. CCUG 33682
C. sp. CCUG 33718
C. sp. CCUG 34451
C. sp. CCUG 34453
C. sp. CCUG 35213
C. sp. CCUG 39361
C. sp. CCUG 41374
C. sp. CCUG 42584
C. sp. CCUG 42741
C. sp. CCUG 42742
C. sp. CCUG 43338
C. sp. CCUG 43740
C. sp. CCUG 44367
C. sp. CCUG 47350
C. sp. CCUG 47909
C. sp. CCUG 47910
C. sp. CCUG 48774
C. sp. CCUG 49474
C. sp. CCUG 50469
C. sp. CCUG 50470
C. sp. CCUG 50471
C. sp. CCUG 53142
C. sp. CCUG 57327
C. sp. MASE-IM4, DSM 105631
C. sp. H6_19, DSM 108254
C. sp. HV4-5-A1G, DSM 104276
C. sp. SM-530-WT-3G, DSM 107452
C. sp. 1/7/47 FAA, DSM 24809
C. sp. 4/1/37 FAA, DSM 24811
C. sp. TG60-1, DSM 25153, NBRC 107100
C. sp. TG60-81, DSM 25154, NBRC 107101
C. sp. JCM 10513
C. sp. JCM 10514
C. sp. JCM 10515
C. sp. JCM 10516
C. sp. JCM 10517
C. sp. JCM 10518
C. sp. JCM 10519
C. sp. JCM 10522
C. sp. JCM 18678
C. sp. JCM 18679
C. sp. JCM 31251
C. sp. JCM 8022, IAM 19107

Section

Clostridium sp. DSM 2634 is an anaerobe, mesophilic bacterium that was isolated from mud.

anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Full Scientific Name (LPSN)	Clostridium Prazmowski 1880 (Approved Lists 1980)

	Synonym	"Tyzzerella"
	Synonym	"Pseudoclostridium"
	Synonym	"Lachnoclostridium"
	Synonym	Anaerobacter
	Synonym	"Inflabilis"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1179]

Culture medium

CLOSTRIDIUM AMINOBUTYRICUM MEDIUM (DSMZ Medium 286)

[Ref.: #1179]

Culture medium growth

[Ref.: #1179]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1179]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1179]			growth	35 °C

[Ref.: #1179]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1179]

Oxygen tolerance

anaerobe

[Ref.: #1179]

Name of produced compound

gamma hydroxybutyrate dehydrogenase

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1179]	Sample type/isolated from	mud
[Ref.: #1179]	Geographic location (country and/or sea, region)	North Carolina swamp
[Ref.: #1179]	Country	USA
[Ref.: #1179]	Country ISO 3 Code	USA
[Ref.: #1179]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Mud (Sludge)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1179]	Clostridium aminobutyricum 16S rRNA gene, strain DSM 2634	X76161	1441	ENA	33953 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Clostridium aminobutyricum DSM 2634	GCA_017255415	contig	GenBank	33953 tax ID	*
[Ref.: #66792]	Clostridium aminobutyricum strain DSM 2634	33953.3	wgs	PATRIC	33953 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Clostridium aminobutyricum strain DSM 2634 PATRIC: 33953.3
[Ref.: #69480]	gram-positive	no	67.182	no
[Ref.: #69480]	anaerobic	yes	99.172	no
[Ref.: #69480]	halophile	no	92.449	no
[Ref.: #69480]	spore-forming	yes	82.429	no
[Ref.: #69480]	glucose-util	yes	62.898	no
[Ref.: #69480]	motile	yes	84.844	no
[Ref.: #69480]	flagellated	no	57.614	no
[Ref.: #69480]	aerobic	no	97.468	yes
[Ref.: #69480]	thermophile	no	99.577	yes
[Ref.: #69480]	glucose-ferment	no	59.787	no

Availability in culture collections External links

[Ref.: #1179]

Culture collection no.

DSM 2634, ATCC 13726

[Ref.: #72203]

SI-ID 47648

References

#1179

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2634

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#72203

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47648.1 )

* These data were automatically processed and therefore are not curated

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Clostridium aminobutyricum strain DSM 2634

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