Name: Clostridium sp. DSM 2634
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 2674

Type strain:

Species: Clostridium sp.

Culture col. no.: DSM 2634, ATCC 13726

Strain history: <- ATCC <- J.K. Hardman ("Clostridium aminobutyricum")

NCBI tax ID(s): 1506 (species)

SI-ID 47648

DSM 2634, ATCC 13726, BCRC 14466, CCRC 14466

Special Collections

DSMZ

Other strains from Clostridium sp.

Section

Clostridium sp. DSM 2634 is an anaerobe bacterium that was isolated from mud.

anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Full Scientific Name (LPSN)	Clostridium Prazmowski 1880 (Approved Lists 1980)

	Synonym	"Tyzzerella"
	Synonym	"Pseudoclostridium"
	Synonym	"Lachnoclostridium"
	Synonym	Anaerobacter
	Synonym	"Inflabilis"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1179]

Culture medium

CLOSTRIDIUM AMINOBUTYRICUM MEDIUM (DSMZ Medium 286)

[Ref.: #1179]

Culture medium growth

[Ref.: #1179]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1179]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1179]			growth	35 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1179]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %92.353

[Ref.: #1179]

Name of produced compound

gamma hydroxybutyrate dehydrogenase

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1179]	Sample type/isolated from	mud
[Ref.: #1179]	Geographic location (country and/or sea, region)	North Carolina swamp
[Ref.: #1179]	Country	USA
[Ref.: #1179]	Country ISO 3 Code	USA
[Ref.: #1179]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Mud (Sludge)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1179]	Clostridium aminobutyricum 16S rRNA gene, strain DSM 2634	X76161	1441	GenBank ENA	33953 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Clostridium aminobutyricum DSM 2634	GCA_017255415	contig	GenBank ENA	33953 tax ID	*
[Ref.: #66792]	Clostridium aminobutyricum strain DSM 2634	33953.3	wgs	PATRIC	33953 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Clostridium aminobutyricum strain DSM 2634 PATRIC: 33953.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	53.521	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	92.353	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	66.549	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	97.135	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	89.266	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	74.525	no

Availability in culture collections External links

[Ref.: #1179]

Culture collection no.

DSM 2634, ATCC 13726

[Ref.: #72203]

SI-ID 47648

References

#1179

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2634

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#72203

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47648.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Clostridium sp. in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Clostridium aminobutyricum strain DSM 2634

Change proposal

Change proposal