Cite this strain

Clostridium sp. (CCUG 49474)

Name: Clostridium sp. (CCUG 49474)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 153399

Type strain

Culture col. no. CCUG 49474

NCBI tax ID(s) 1506

Special Collections CCUG

Links

CCUG 49474 is an anaerobe, mesophilic prokaryote that was isolated from Human hand,65-yr-old man,subcutaneous infection.

anaerobe mesophilic

Name and taxonomic classification

SI-ID 214652

CCUG 49474

@ref 20215

Last LPSN update 2025-12-16 10:06:49

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Clostridium

Full scientific name Clostridium Prazmowski 1880 (Approved Lists 1980)

Synonyms (8)

Thomasclavelia
"Erysipelatoclostridium"
"Pseudoclostridium"
"Andreesenella"
"Tyzzerella"
"Lachnoclostridium"
Anaerobacter
"Inflabilis"

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
58572	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

58572

Oxygen toleranceanaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68380	16024 ChEBI	D-mannose	+	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68380	alpha-fucosidase	+	3.2.1.51	from API rID32A
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68382	beta-galactosidase	-	3.2.1.23	from API zym
68380	beta-galactosidase	+	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68382	beta-glucosidase	+	3.2.1.21	from API zym
68380	beta-glucosidase	+	3.2.1.21	from API rID32A
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
68382	leucine arylamidase	-	3.4.11.1	from API zym
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68382	trypsin	-	3.4.21.4	from API zym
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

58572

Fatty acid	Percentage	ECL
C16:0	20.3	16
C15:0 ISO	8	14.621
C18:2 ω6,9c/C18:0 ANTE	5.4	17.724
C17:1 ω9c ISO	5	16.416
C16:1 ω7c DMA	4.7	16.288
C18:1 ω9c	4.6	17.769
C16:1 ω7c	4.4	15.819
C14:0	3.7	14
C17:1 ISO I/C16:0 DMA	3.5	16.481
C16:1 ω9c	3.3	15.774
C18:1 ω9c DMA	3.1	18.226
C14:0 ISO 3OH	3.1	15.117
C13:0 3OH/C15:1 i I/H	3	14.469
C17:0 iso 3OH	2.9	18.161
unknown 14.776	2.5	14.776
C17:0 CYCLO	2.3	16.888
C16:1 ω9c DMA	2.2	16.242
C17:0 iso	2	16.629
C18:1 ω7c /12t/9t	1.8	17.824
C18:0	1.6	18
C15:1 ω5c	1.3	14.904
C13:1 at 12-13	1.3	12.931
C17:0 anteiso	1.1	16.722
unknown 13.566	1.1	13.566
C19:1 ISO I	1	18.473
C15:1 ISO F	1	14.414
C18:1 ω7c DMA	1	18.282
C16:0 aldehyde	1	14.949
C15:0 ANTEISO	0.9	14.711
C16:1 ω7c alcohol	0.8	15.386
C16:1 ω5c	0.7	15.908
unknown 17.105	0.6	17.105

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
58572	-	-	+	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
58572	-	-	-	+	-	+	+	-	-	-	+	-	-	+	-	-	-	+	-	-	-	-	+	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	#Male
#Host Body-Site	#Limb	#Hand
#Infection	#Disease	-
#Infection	#Patient	-

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
58572	Human hand,65-yr-old man,subcutaneous infection	2004-06-18	Göteborg	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#58572	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 49474
#68380	Automatically annotated from API rID32A .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Clostridium sp. (CCUG 49474)

Name and taxonomic classification

Morphology