Name: Clostridium sp. ID02-1354
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 2698

Type strain:

Species: Clostridium sp.

Strain Designation: ID02-1354, TDO

Culture col. no.: DSM 15348

Strain history: <- E. A. Assih, Lab. Microbiol. de l'IRD/ESIL, Univ. de Provence et de la Méditerranée, Marseille, France; TDO <- C. T. Ouattara <- A. Traore

NCBI tax ID(s): 1506 (species)

SI-ID 401113

DSM 15348

Special Collections

DSMZ

Other strains from Clostridium sp.

Section

Clostridium sp. ID02-1354 is an anaerobe bacterium that was isolated from termite gut.

anaerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Full Scientific Name (LPSN)	Clostridium Prazmowski 1880 (Approved Lists 1980)

	Synonym	"Tyzzerella"
	Synonym	"Pseudoclostridium"
	Synonym	"Lachnoclostridium"
	Synonym	Anaerobacter
	Synonym	"Inflabilis"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5863]

Culture medium

PY + X MEDIUM (DSMZ Medium 104b)

[Ref.: #5863]

Culture medium growth

[Ref.: #5863]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5863]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5863]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5863]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5863]	Sample type/isolated from	termite gut
[Ref.: #5863]	Country	Burkina Faso
[Ref.: #5863]	Country ISO 3 Code	BFA
[Ref.: #5863]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Host	#Arthropoda	#Insecta
#Host Body-Site	#Gastrointestinal tract	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF520990 (>99% sequence identity) for Lacrimispora saccharolytica from Microbeatlas

Aquatic Samples	397
Soil Samples	348
Animal Samples	834
Plant Samples	185
Total Samples	1764

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5863]	Clostridium sp. TDO 16S ribosomal RNA gene, partial sequence	AF520990	1298	GenBank ENA	210828 tax ID

[Ref.: #5863]

GC-content

48.2 mol%

Availability in culture collections External links

[Ref.: #5863]

Culture collection no.

DSM 15348

[Ref.: #72226]

SI-ID 401113

References

#5863

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15348

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#72226

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401113.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Clostridium sp. in external resources:
SILVA
BRENDA
PANGAEA
GBIF