Clostridium sp. (DSM 25153, NBRC 107100, TG60-1)

Name: Clostridium sp. (DSM 25153, NBRC 107100, TG60-1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 160012

Type strain

Strain Designation TG60-1

Culture col. no. DSM 25153 NBRC 107100 TG60-1

NCBI tax ID(s) 1506

Special Collections DSMZ

History <- M. Akane, University of Tokyo, Grad. School of Agricult. and Life Scs., Japan; TG60-1 <- K. Shunsuke <- M. Akane {2009}

Links

TG60-1 is a bacterium that was isolated from compost.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 397142

DSM 25153

@ref 20215

Last LPSN update 2026-02-09 11:38:47

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Clostridium

Full scientific name Clostridium Prazmowski 1880 (Approved Lists 1980)

Synonyms (8)

Thomasclavelia
"Erysipelatoclostridium"
"Pseudoclostridium"
"Andreesenella"
"Tyzzerella"
"Lachnoclostridium"
Anaerobacter
"Inflabilis"

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
66916	CALDICELLULOSIRUPTOR MEDIUM (DSMZ Medium 640)		Medium recipe at MediaDive	Name: CALDICELLULOSIRUPTOR MEDIUM (DSMZ Medium 640) Composition: Trypticase peptone 2.0 g/l K2HPO4 1.5 g/l Cellobiose 1.0 g/l Yeast extract 1.0 g/l NH4Cl 0.9 g/l NaCl 0.9 g/l L-Cysteine HCl x H2O 0.75 g/l KH2PO4 0.75 g/l MgCl2 x 6 H2O 0.4 g/l HCl 0.0025 g/l FeCl3 x 6 H2O 0.0025 g/l FeCl2 x 4 H2O 0.0015 g/l Sodium resazurin 0.0005 g/l CoCl2 x 6 H2O 0.00019 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l Na2MoO4 x 2 H2O 3.6e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l H3BO3 6e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
66916	positive	growth	60

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
66916	compost	Tokyo	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB551424 (>99% sequence identity) for Oscillospiraceae from Microbeatlas

Aquatic Samples	123
Soil Samples	316
Animal Samples	81
Plant Samples	114
Total Samples	634

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66916	Clostridium sp. TG60-1 gene for 16S ribosomal RNA, partial sequence	AB551424	1455		747601

GC content

66916

GC-content (mol%)45.4

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66916	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25153
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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