Salmonella enterica subsp. enterica K 103 is a Gram-negative, motile, rod-shaped bacterium of the family Enterobacteriaceae.
Gram-negative motile rod-shaped genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Salmonella |
| Species Salmonella enterica subsp. enterica |
| Full scientific name Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 1620 | NUTRIENT AGAR (DSMZ Medium 1) | Medium recipe at MediaDive | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water | ||
| 36264 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 1620 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 1620 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 119046 | CIP Medium 72 | Medium recipe at CIP |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | aerobe | 90.9 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 91.4 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68368 | 29016 ChEBI | arginine | + | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | + | assimilation | from API 20E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 68368 | 28053 ChEBI | melibiose | + | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | + | fermentation | from API 20E |
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 68368 | 30911 ChEBI | sorbitol | + | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68368 | gelatinase | - | from API 20E | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1620 | - | + | + | + | + | + | - | - | - | - | - | + | + | + | + | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 1620 | - | + | + | + | + | + | - | - | - | - | - | + | + | + | + | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 124043 | ASM4036715v1 assembly for Salmonella enterica subsp. enterica NBRC 100797 | contig | 59201 | 70.76 | |||
| 66792 | 30066_G01 assembly for Salmonella enterica subsp. enterica NCTC6017 | complete | 59201 | 59.12 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 124043 | Salmonella enterica subsp. enterica gene for 16S rRNA, partial sequence, strain: NBRC 100797. | AB681241 | 1467 | 59201 | ||
| 124043 | Salmonella enterica subsp. enterica serovar Paratyphi B strain CMCC(B)50094 16S ribosomal RNA gene, partial sequence. | MK341705 | 1329 | 57045 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 91.40 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 73.40 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 96.60 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 90.90 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 100.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 92.99 | no |
| 125438 | aerobic | aerobicⓘ | no | 75.67 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 89.15 | no |
| 125438 | thermophilic | thermophileⓘ | no | 99.00 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 74.39 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Salmonella enterica Serovar Abony Outbreak Caused by Clone of Reference Strain WDCM 00029, Chile, 2024. | Pina-Iturbe A, Fredes-Garcia D, Garcia P, Porte L, Johnson TJ, Singer RS, Toro M, Munita JM, Moreno-Switt AI. | Emerg Infect Dis | 10.3201/eid3101.241012 | 2025 | ||
| Production of biologically active hydroxytyrosol rich extract via catalytic conversion of tyrosol. | Bouguerra Neji S, Bouaziz M. | RSC Adv | 10.1039/d1ra08875k | 2022 | ||
| Pathogenicity | Correlation between chemical composition and antibacterial activity of some Lamiaceae species essential oils from Tunisia. | Moumni S, Elaissi A, Trabelsi A, Merghni A, Chraief I, Jelassi B, Chemli R, Ferchichi S. | BMC Complement Med Ther | 10.1186/s12906-020-02888-6 | 2020 | |
| Ruminococcin C, a promising antibiotic produced by a human gut symbiont. | Chiumento S, Roblin C, Kieffer-Jaquinod S, Tachon S, Lepretre C, Basset C, Aditiyarini D, Olleik H, Nicoletti C, Bornet O, Iranzo O, Maresca M, Hardre R, Fons M, Giardina T, Devillard E, Guerlesquin F, Coute Y, Atta M, Perrier J, Lafond M, Duarte V. | Sci Adv | 10.1126/sciadv.aaw9969 | 2019 | ||
| Synthesis and Evaluation of the Antibacterial Activities of 13-Substituted Berberine Derivatives. | Olleik H, Yacoub T, Hoffer L, Gnansounou SM, Benhaiem-Henry K, Nicoletti C, Mekhalfi M, Pique V, Perrier J, Hijazi A, Baydoun E, Raymond J, Piccerelle P, Maresca M, Robin M. | Antibiotics (Basel) | 10.3390/antibiotics9070381 | 2020 | ||
| Antibacterial properties of copper-tantalum thin films: The impact of copper content and thermal treatment on implant coatings. | Azamatov B, Dzhes A, Borisov A, Kaliyev D, Maratuly B, Sagidugumar A, Alexandr M, Turlybekuly A, Plotnikov S. | Heliyon | 10.1016/j.heliyon.2024.e41130 | 2025 | ||
| Effect of combined infection with Salmonella and influenza virus on their respective proliferation in chicken embryonated eggs. | Sakudo A. | Open Vet J | 10.5455/ovj.2024.v14.i3.19 | 2024 | ||
| Enzymology | Development and Application of Edible Coatings with Malva sylvestris L. Extract to Extend Shelf-Life of Small Loaf. | Alexieva I, Baeva M, Popova A, Fidan H, Goranova Z, Milkova-Tomova I, Milkova-Tomova I. | Foods | 10.3390/foods11233831 | 2022 | |
| A Review of CAC-717, a Disinfectant Containing Calcium Hydrogen Carbonate Mesoscopic Crystals. | Sakudo A, Furusaki K, Onishi R, Onodera T, Yoshikawa Y. | Microorganisms | 10.3390/microorganisms13030507 | 2025 | ||
| Environmental DNA transformation resulted in an active phage in Escherichia coli. | Karaynir A, Bozdogan B, Salih Dogan H. | PLoS One | 10.1371/journal.pone.0292933 | 2023 | ||
| Chemical Composition of Essential Oils from Nepeta transcaucasica Grossh. and Nepeta cataria L. Cultivated in Bulgaria and Their Antimicrobial and Antioxidant Activity. | Mollova S, Dzhurmanski A, Fidan H, Bojilov D, Manolov S, Dincheva I, Stankov S, Stoyanova A, Ercisli S, Assouguem A, Marc RA, Ullah R, Bari A. | ACS Omega | 10.1021/acsomega.3c00704 | 2023 | ||
| Vitex Genus as a Source of Antimicrobial Agents. | Islam Z, Caldeira GI, Canica M, Islam N, Silva O. | Plants (Basel) | 10.3390/plants13030401 | 2024 | ||
| Phylogeny | Antimicrobial Activity against Foodborne Pathogens and Antioxidant Activity of Plant Leaves Traditionally Used as Food Packaging. | Thongphichai W, Pongkittiphan V, Laorpaksa A, Wiwatcharakornkul W, Sukrong S. | Foods | 10.3390/foods12122409 | 2023 | |
| Genetics | Genome archaeology of two laboratory Salmonella enterica enterica sv Typhimurium. | Zaworski J, Dagva O, Kingston AW, Fomenkov A, Morgan RD, Bossi L, Raleigh EA. | G3 (Bethesda) | 10.1093/g3journal/jkab226 | 2021 | |
| Hypericum Essential Oils-Composition and Bioactivities: An Update (2012-2022). | Grafakou ME, Barda C, Karikas GA, Skaltsa H. | Molecules | 10.3390/molecules27165246 | 2022 | ||
| Bioactive Potential of Elderberry (Sambucus nigra L.): Antioxidant, Antimicrobial Activity, Bioaccessibility and Prebiotic Potential. | Has IM, Teleky BE, Szabo K, Simon E, Ranga F, Diaconeasa ZM, Purza AL, Vodnar DC, Tit DM, Nitescu M. | Molecules | 10.3390/molecules28073099 | 2023 | ||
| Chemical Compounds, Antitumor and Antimicrobial Activities of Dry Ethanol Extracts from Koelreuteria paniculata Laxm. | Andonova T, Muhovski Y, Fidan H, Slavov I, Stoyanova A, Dimitrova-Dyulgerova I. | Plants (Basel) | 10.3390/plants10122715 | 2021 | ||
| A Review of the Antibacterial, Fungicidal and Antiviral Properties of Selenium Nanoparticles. | Serov DA, Khabatova VV, Vodeneev V, Li R, Gudkov SV. | Materials (Basel) | 10.3390/ma16155363 | 2023 | ||
| Pathogenicity | Anti-Salmonella Activity and Peptidomic Profiling of Peptide Fractions Produced from Sturgeon Fish Skin Collagen (Huso huso) Using Commercial Enzymes. | Atef M, Chait YA, Ojagh SM, Latifi AM, Latifi AM, Esmaeili M, Hammami R, Udenigwe CC. | Nutrients | 10.3390/nu13082657 | 2021 | |
| Pathogenicity | Inactivation of Non-Enveloped Viruses and Bacteria by an Electrically Charged Disinfectant Containing Meso-Structure Nanoparticles via Modification of the Genome. | Sakudo A, Yamashiro R, Haritani M, Furusaki K, Onishi R, Onodera T. | Int J Nanomedicine | 10.2147/ijn.s229880 | 2020 | |
| Evaluation of Antimicrobial Potential and Comparison of HPLC Composition, Secondary Metabolites Count, and Antioxidant Activity of Mentha rotundifolia and Mentha pulegium Extracts. | Alharbi NK, Naghmouchi S, Al-Zaban M. | Evid Based Complement Alternat Med | 10.1155/2021/9081536 | 2021 | ||
| HPLC-Analysis, Biological Activities and Characterization of Action Mode of Saudi Marrubium vulgare against Foodborne Diseases Bacteria. | Al-Zaban M, Naghmouchi S, AlHarbi NK. | Molecules | 10.3390/molecules26175112 | 2021 | ||
| Unravelling Phytochemical and Bioactive Potential of Three Hypericum Species from Romanian Spontaneous Flora: H. alpigenum, H. perforatum and H. rochelii | Babota M, Frumuzachi O, Mocan A, Tamas M, Dias MI, Pinela J, Stojkovic D, Sokovic M, Badarau AS, Crisan G, Barros L, Paltinean R. | Plants (Basel) | 10.3390/plants11202773 | 2022 | ||
| Antioxidant, Antimicrobial, and Insecticidal Properties of Chemically Characterized Essential Oils Extracted from Mentha longifolia: In Vitro and In Silico Analysis. | Tourabi M, Nouioura G, Touijer H, Baghouz A, El Ghouizi A, Chebaibi M, Bakour M, Ousaaid D, Almaary KS, Nafidi HA, Bourhia M, Farid K, Lyoussi B, Derwich E. | Plants (Basel) | 10.3390/plants12213783 | 2023 | ||
| Chemical Characterization, Antioxidant and Antimicrobial Properties of Goji Berries Cultivated in Serbia. | Ilic T, Dodevska M, Marcetic M, Bozic D, Kodranov I, Vidovic B. | Foods | 10.3390/foods9111614 | 2020 | ||
| Evaluation of the Astragalus exscapus L. subsp. transsilvanicus Roots' Chemical Profile, Phenolic Composition and Biological Activities. | Szabo K, Ranga F, Elemer S, Varvara RA, Diaconeasa Z, Dulf FV, Vodnar DC. | Int J Mol Sci | 10.3390/ijms232315161 | 2022 | ||
| A comparative analysis of in vitro and in vivo efficacies of the enantiomers of thioridazine and its racemate. | Christensen JB, Hendricks O, Chaki S, Mukherjee S, Das A, Pal TK, Dastidar SG, Kristiansen JE. | PLoS One | 10.1371/journal.pone.0057493 | 2013 | ||
| Biotechnology | Validation of the One Broth One Plate for Salmonella Method for Detection of Salmonella Spp. in Select Food and Environmental Samples: AOAC Performance Tested MethodSM 102002. | Alles S, Roman B, Le QN, Kurteu M, Elmerhebi E, Potter C, Mozola M, Thompson W, Bastin B, Donofrio R. | J AOAC Int | 10.1093/jaoacint/qsaa149 | 2021 | |
| Development of Pectin and Poly(vinyl alcohol)-Based Active Packaging Enriched with Itaconic Acid and Apple Pomace-Derived Antioxidants. | Teleky BE, Mitrea L, Plamada D, Nemes SA, Calinoiu LF, Pascuta MS, Varvara RA, Szabo K, Vajda P, Szekely C, Martau GA, Elemer S, Ranga F, Vodnar DC. | Antioxidants (Basel) | 10.3390/antiox11091729 | 2022 | ||
| Biotechnology | Lactobacillus species mediated synthesis of silver nanoparticles and their antibacterial activity against opportunistic pathogens in vitro. | Garmasheva I, Kovalenko N, Voychuk S, Ostapchuk A, Livins'ka O, Oleschenko L. | Bioimpacts | 10.15171/bi.2016.29 | 2016 | |
| Molecular Phylogenetics and Biological Potential of Fungal Endophytes From Plants of the Sundarbans Mangrove. | Rahaman MS, Siraj MA, Sultana S, Seidel V, Islam MA. | Front Microbiol | 10.3389/fmicb.2020.570855 | 2020 | ||
| Bacteriophages as Potential Tools for Detection and Control of Salmonella spp. in Food Systems. | Wei S, Chelliah R, Rubab M, Oh DH, Uddin MJ, Ahn J. | Microorganisms | 10.3390/microorganisms7110570 | 2019 | ||
| Discovery of 2-aryl and 2-pyridinylbenzothiazoles endowed with antimicrobial and aryl hydrocarbon receptor agonistic activities. | Goya-Jorge E, Abdmouleh F, Carpio LE, Giner RM, Sylla-Iyarreta Veitia M. | Eur J Pharm Sci | 10.1016/j.ejps.2020.105386 | 2020 | ||
| Genetics | Genome Features and Secondary Metabolites Biosynthetic Potential of the Class Ktedonobacteria. | Zheng Y, Saitou A, Wang CM, Toyoda A, Minakuchi Y, Sekiguchi Y, Ueda K, Takano H, Sakai Y, Abe K, Yokota A, Yabe S. | Front Microbiol | 10.3389/fmicb.2019.00893 | 2019 | |
| Phylogeny | Colony fingerprint for discrimination of microbial species based on lensless imaging of microcolonies. | Maeda Y, Dobashi H, Sugiyama Y, Saeki T, Lim TK, Harada M, Matsunaga T, Yoshino T, Tanaka T. | PLoS One | 10.1371/journal.pone.0174723 | 2017 | |
| High Bacterial Agglutination Activity in a Single-CRD C-Type Lectin from Spodoptera exigua (Lepidoptera: Noctuidae). | Gasmi L, Ferre J, Herrero S. | Biosensors (Basel) | 10.3390/bios7010012 | 2017 | ||
| Biotechnology | Marine-Derived Enterococcus faecalis HY0110 as a Next-Generation Functional Food Probiotic: Comprehensive In Vitro and In Vivo Bioactivity Evaluation and Synergistic Fermentation of Periplaneta americana Extract Powder. | Huang F, Yang N, Zhang Q, Luo C, Wang J, Yang Y, Yue B, Chen P, Zhang X. | Foods | 10.3390/foods14071181 | 2025 | |
| Salmonella typhimurium targeting with monoclonal antibodies prevents infection in mice. | Li J, Yang Y, Fan Z, Huang Z, Chen J, Liu Q. | PLoS Negl Trop Dis | 10.1371/journal.pntd.0011579 | 2023 | ||
| Genetics | Genomic Analysis of a Novel Phage Infecting the Turkey Pathogen Escherichia coli APEC O78 and Its Endolysin Activity. | Deng S, Xu Q, Fu Y, Liang L, Wu Y, Peng F, Gao M. | Viruses | 10.3390/v13061034 | 2021 | |
| Phylogeny | Dual Inhibition of Salmonella enterica and Clostridium perfringens by New Probiotic Candidates Isolated from Chicken Intestinal Mucosa. | Lone A, Mottawea W, Ait Chait Y, Hammami R | Microorganisms | 10.3390/microorganisms9010166 | 2021 |
| #1620 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4224 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #36264 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68368 | Automatically annotated from API 20E . |
| #119046 | Collection of Institut Pasteur ; Curators of the CIP; CIP 110658 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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