Salmonella enterica Mutton is a facultative anaerobe, mesophilic, Gram-negative prokaryote that has multiple antibiotic resistances and was isolated from Human feces .
antibiotic resistance Gram-negative motile rod-shaped facultative anaerobe mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Salmonella |
| Species Salmonella enterica |
| Full scientific name Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987 |
| Synonyms (9) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 2225 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 2225 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 2225 | NUTRIENT AGAR (DSMZ Medium 1) | Medium recipe at MediaDive | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water | ||
| 36616 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 119045 | CIP Medium 72 | Medium recipe at CIP |
| 119045 | Oxygen tolerancefacultative anaerobe |
| Test 1 | |
|---|---|
| @ref | 2225 |
| Medium | Mueller-Hinton Agar |
| Manual annotation | 1 |
| Inhibition zone diameter in mm | |
| Amikacin 30µg (disc) | 30 |
| Ampicillin 10µg (disc) | 36 |
| Aztreonam 30µg (disc) | 48 |
| Bacitracin 10Unit | 0 |
| Cefalotin 30µg (disc) | 36-38 |
| Cefazolin 30µg (disc) | 34 |
| Cefotaxime 30µg (disc) | 46 |
| Ceftriaxone 30µg (disc) | 42-44 |
| Chloramphenicol 30µg (disc) | 36 |
| Clindamycin 10µg (disc) | 0 |
| Colistin 10µg (disc) | 14 |
| Doxycycline 30µg (disc) | 26-28 |
| Erythromycin 15µg (disc) | 16-18 |
| Fosfomycin 50µg (disc) | 50 |
| Gentamycin 10µg (disc) | |
| Imipenem 10µg (disc) | 34-36 |
| Kanamycin 30µg (disc) | 30 |
| Lincomycin 15µg (disc) | 0 |
| Linezolid 10µg (disc) | 8 |
| Mezlocillin 30µg (disc) | 34-36 |
| Moxifloxacin 5µg (disc) | 40 |
| Neomycin 30µg (disc) | 24-26 |
| Nitrofurantoin 100µg (disc) | 26 |
| Norfloxacin 10µg (disc) | 42 |
| Nystatin 100Unit | 0 |
| Ofloxacin 5µg (disc) | 40 |
| Oxacillin 5µg (disc) | 0 |
| Penicillin G 6µg (disc) | 30-32 |
| Pipemidic acid 20µg (disc) | 30-32 |
| Piperacillin/Tazobactam 40µg (disc) | 38 |
| Polymyxin B 300Unit | 16 |
| Quinupristin/Dalfopristin 15µg (disc) | 10 |
| Teicoplanin 30µg (disc) | 0 |
| Tetracycline 30µg (disc) | 30 |
| Ticarcillin 75µg (disc) | 42 |
| Vancomycin 30µg (disc) | 0 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68368 | 29016 ChEBI | arginine | + | hydrolysis | from API 20E |
| 119045 | 16947 ChEBI | citrate | + | carbon source | |
| 68368 | 16947 ChEBI | citrate | + | assimilation | from API 20E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 119045 | 17234 ChEBI | glucose | + | fermentation | |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 119045 | 17716 ChEBI | lactose | - | fermentation | |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 119045 | 15792 ChEBI | malonate | - | assimilation | |
| 119045 | 29864 ChEBI | mannitol | + | fermentation | |
| 68368 | 28053 ChEBI | melibiose | + | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | + | fermentation | from API 20E |
| 119045 | 17632 ChEBI | nitrate | - | reduction | |
| 119045 | 16301 ChEBI | nitrite | + | reduction | |
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 119045 | 132112 ChEBI | sodium thiosulfate | + | builds gas from | |
| 68368 | 30911 ChEBI | sorbitol | + | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | ChEBI | Metabolite | Is resistant | Resistance conc. | |
|---|---|---|---|---|---|
| 2225 | 28669 | Bacitracin | 10 Unit | from Antibiotic test | |
| 2225 | 3745 | Clindamycin | 10 µg (disc) | from Antibiotic test | |
| 2225 | 6472 | Lincomycin | 15 µg (disc) | from Antibiotic test | |
| 2225 | 7660 | Nystatin | 100 Unit | from Antibiotic test | |
| 2225 | 7809 | Oxacillin | 5 µg (disc) | from Antibiotic test | |
| 2225 | 29687 | Teicoplanin | 30 µg (disc) | from Antibiotic test | |
| 2225 | 28001 | Vancomycin | 30 µg (disc) | from Antibiotic test |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 119045 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | + | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 119045 | beta-galactosidase | - | 3.2.1.23 | |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 119045 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 119045 | gelatinase | - | ||
| 68368 | gelatinase | - | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 119045 | lysine decarboxylase | + | 4.1.1.18 | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 119045 | ornithine decarboxylase | + | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 119045 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 119045 | urease | - | 3.5.1.5 | |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2225 | - | + | + | + | + | + | - | - | - | - | - | + | + | + | + | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | |
| 2225 | - | + | + | + | + | + | - | - | - | + | - | + | + | + | + | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
Global distribution of 16S sequence KC768785 (>99% sequence identity) for Salmonella enterica from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM1556573v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium NCTC 74 | complete | 90371 | 99.23 | ||||
| 66792 | ASM74305v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium ATCC 13311 | complete | 90371 | 99.05 | ||||
| 124043 | ASM4036633v1 assembly for Salmonella enterica subsp. enterica NBRC 105726 | contig | 59201 | 71.82 | ||||
| 124043 | 28265_A01 assembly for Salmonella enterica subsp. enterica serovar Typhimurium NCTC74 | contig | 90371 | 48.08 | ||||
| 124043 | ASM4768867v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium ATCC 13311 | contig | 90371 | 44.9 | ||||
| 66792 | ASM61448v1 assembly for Salmonella enterica subsp. enterica serovar Typhimurium str. JCM 1652 | contig | 1236523 | 18.92 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 13311 16S ribosomal RNA gene, partial sequence | EU014686 | 1262 | 90371 | ||
| 20218 | Salmonella enterica subsp. enterica serovar Heidelberg strain ATCC 13311 16S ribosomal RNA gene, partial sequence | KC768785 | 1360 | 611 | ||
| 20218 | Salmonella enterica subsp. enterica serovar Heidelberg strain ATCC 13311 glutamate racemase gene, partial cds; and 16S ribosomal RNA gene, partial sequence | KC768818 | 689 | 611 | ||
| 20218 | S.typhimurium 16S rRNA gene | X80681 | 1540 | 90371 | ||
| 67770 | Salmonella enterica subsp. enterica gene for 16S rRNA, partial sequence, strain: JCM 1652 | AB594754 | 1464 | 59201 | ||
| 124043 | Salmonella enterica subsp. enterica gene for 16S rRNA, partial sequence, strain: NBRC 105726. | AB682290 | 1467 | 59201 | ||
| 124043 | Salmonella enterica subsp. enterica strain ATCC 13311 16S ribosomal RNA gene, partial sequence. | PP068854 | 941 | 59201 | ||
| 124043 | Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 13311 16S ribosomal RNA gene, partial sequence. | MH173806 | 653 | 90371 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 85.70 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 95.60 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 71.50 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 91.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 100.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 94.51 | no |
| 125438 | aerobic | aerobicⓘ | no | 74.77 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 89.03 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.00 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 75.53 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Hygiene Efficacy of Short Cycles in Domestic Dishwashers. | Kudla M, Tewes TJ, Gibbin-Lameira E, Harcq L, Bockmuhl DP. | Microorganisms | 10.3390/microorganisms13071542 | 2025 | ||
| Phylogeny | Simultaneous detection and differentiation of Escherichia coli populations from environmental freshwaters by means of sequence variations in a fragment of the beta-D-glucuronidase gene. | Farnleitner AH, Kreuzinger N, Kavka GG, Grillenberger S, Rath J, Mach RL. | Appl Environ Microbiol | 10.1128/aem.66.4.1340-1346.2000 | 2000 | |
| Effects of Fucoidan on the Inhibition of Biofilm Formation of Salmonella enterica Subsp. enterica Serovar Typhimurium on Seafoods and Its Molecular Antibiofilm Mechanisms. | Roy A, Roy PK, Cho SR, Park SY. | Microorganisms | 10.3390/microorganisms13040914 | 2025 | ||
| Genetics | Genome sequencing and analysis of Salmonella enterica subsp. enterica serotype Enteritidis PT4 578: insights into pathogenicity and virulence. | Carneiro DG, Vidigal PMP, Morgan T, Vanetti MCD. | Access Microbiol | 10.1099/acmi.0.000828.v3 | 2024 | |
| Antimicrobial and antioxidant activities of peptide derived from turmeric plant (Curcuma longa L). | Roytrakul S, Charoenlappanit S, Kittisenachai S, Siangpro N, Sichaem J, Chuakrut S, Sarin S, Jutakanoke R. | PLoS One | 10.1371/journal.pone.0314482 | 2024 | ||
| Investigation of different cold adaptation abilities in Salmonella enterica serotype Typhimurium strains using extracellular metabolomic approach. | Hong H, Kim HJ, Kim HJ, Jo C. | Int Microbiol | 10.1007/s10123-024-00556-0 | 2025 | ||
| Rapid Quantification of Salmonella Typhimurium in Ground Chicken Using Immunomagnetic Chemiluminescent Assay. | Thapa S, Ghimire N, Chen FC. | Microorganisms | 10.3390/microorganisms13040871 | 2025 | ||
| Isolation, identification, and antimicrobial activity of lactic acid bacteria associated with two traditional Colombian types of cheese: Quesillo and double-cream cheese | Durango-Zuleta MM, Fuentes-Vanegas M, Sepulveda-Valencia JU, Moreno Herrera CX. | Lebensm Wiss Technol | 2024 | |||
| Suitability of Escherichia coli ATCC 11229 as Salmonella enterica surrogate for strawberry nectar pasteurization | Gedas A, Schmidt H, Weiss A. | Lebensm Wiss Technol | 2024 | |||
| Enterocin LD3 from Enterococcus hirae LD3 Inhibits the Growth of Salmonella enterica subsp. enterica serovar Typhimurium ATCC 13311 in Fruit Juice. | Sheoran P, Yadav MK, Kumari I, Tiwari SK. | Probiotics Antimicrob Proteins | 10.1007/s12602-023-10108-z | 2024 | ||
| Genetics | Combined effect of SAR-endolysin LysKpV475 with polymyxin B and Salmonella bacteriophage phSE-5. | Gontijo M, Pereira Teles M, Martins Correia H, Perez Jorge G, Rodrigues Santos Goes IC, Fasabi Flores AJ, Braz M, de Moraes Ceseti L, Zonzini Ramos P, Rosa E Silva I, Pereira Vidigal PM, Kobarg J, Miguez Counago R, Alvarez-Martinez CE, Pereira C, Freire CSR, Almeida A, Brocchi M. | Microbiology (Reading) | 10.1099/mic.0.001462 | 2024 | |
| Novel TaqMan® real-time PCR targeting invJ gene for 8-h detection of Salmonella from food matrices. | Isaac AM, Kolla HB, Pallavi KP, Bandyadka S, Mhatre CN, Urs RM, Kingston JJ. | Front Microbiol | 10.3389/fmicb.2025.1517680 | 2025 | ||
| The Molecular Weight of Enzymatically Modified Pectic Oligosaccharides from Apple Pomace as a Determinant for Biological and Prebiotic Activity. | Wilkowska A, Nowak A, Motyl I, Oracz J. | Molecules | 10.3390/molecules30010046 | 2024 | ||
| Multidrug-resistant non-typhoidal Salmonella enterica from chickens, farmworkers, and environments: One health implications from Northwestern Ethiopia. | Mengistu AB, Belete MA, Tassew H, Kassa HY, Alemu BG, Tegegne HC, Areda D. | PLoS One | 10.1371/journal.pone.0333591 | 2025 | ||
| Antibacterial Activity of Oregano (Origanum vulgare L.) Essential Oil Vapors against Microbial Contaminants of Food-Contact Surfaces. | Pinto L, Cervellieri S, Netti T, Lippolis V, Baruzzi F. | Antibiotics (Basel) | 10.3390/antibiotics13040371 | 2024 | ||
| Phytochemical composition, antioxidant, antibacterial, and enzyme inhibitory activities of organic extracts from flower buds of Cleistocalyx operculatus (Roxb.) Merr. et Perry. | Thanh DT, Oanh VK, Nguyen HC, Ngan LTM, Hieu TT. | BioTechnologia (Pozn) | 10.5114/bta.2024.139753 | 2024 | ||
| A novel designed membrane-active peptide for the control of foodborne Salmonella enterica serovar Typhimurium. | Sengkhui S, Klubthawee N, Aunpad R. | Sci Rep | 10.1038/s41598-023-30427-z | 2023 | ||
| Analytical and Antimicrobial Characterization of Zn-Modified Clays Embedding Thymol or Carvacrol. | Pinto L, Baruzzi F, Terzano R, Busto F, Marzulli A, Magno C, Cometa S, De Giglio E. | Molecules | 10.3390/molecules29153607 | 2024 | ||
| Harnessing Fermented Soymilk Production by a Newly Isolated Pediococcus acidilactici F3 to Enhance Antioxidant Level with High Antimicrobial Activity against Food-Borne Pathogens during Co-Culture. | Chan S, Jantama K, Prasitpuriprecha C, Wansutha S, Phosriran C, Yuenyaow L, Cheng KC, Jantama SS. | Foods | 10.3390/foods13132150 | 2024 | ||
| Probiotic Properties of Chicken-Derived Highly Adherent Lactic Acid Bacteria and Inhibition of Enteropathogenic Bacteria in Caco-2 Cells. | Wang P, Chen S, Liao C, Jia Y, Li J, Shang K, Chen J, Cao P, Li W, Li Y, Yu Z, Ding K. | Microorganisms | 10.3390/microorganisms10122515 | 2022 | ||
| Gold Nanoparticle-Based Plasmonic Detection of Escherichia coli, Salmonella enterica, Campylobacter jejuni, and Listeria monocytogenes from Bovine Fecal Samples | Ghazy A, Nyarku R, Faraj R, Bentum K, Woube Y, Williams M, Alocilja E, Abebe W. | Microorganisms | 2024 | |||
| Enhancing Antibiotic Efficacy with Natural Compounds: Synergistic Activity of Tannic Acid and Nerol with Commercial Antibiotics against Pathogenic Bacteria. | Lorca G, Ballestero D, Langa E, Pino-Otin MR. | Plants (Basel) | 10.3390/plants13192717 | 2024 | ||
| Simultaneous detection of seven bacterial pathogens transmitted by flies using the reverse line blot hybridization assay. | Ma Y, Niu Q, Sun X, Li Y, Gou H, Wang Z, Song B. | Parasit Vectors | 10.1186/s13071-024-06170-3 | 2024 | ||
| Preparation and Efficacy of Microemulsion Carvacrol-Based Fruit and Vegetable Cleaner and Its Application on Cherry Tomatoes. | Wang Y, Sun D, Zhang Y, Zhou Y, Jin R, Peng X, Li J. | Foods | 10.3390/foods14020152 | 2025 | ||
| Antibacterial Activity of Biodegradable Films Incorporated with Biologically-Synthesized Silver Nanoparticles and the Evaluation of Their Migration to Chicken Meat. | das Neves MDS, Scandorieiro S, Pereira GN, Ribeiro JM, Seabra AB, Dias AP, Yamashita F, Martinez CBDR, Kobayashi RKT, Nakazato G. | Antibiotics (Basel) | 10.3390/antibiotics12010178 | 2023 | ||
| Biotechnology | A proof-of-concept study using a graphene oxide-bovine serum albumin nanocomposite-based electrochemical aptasensor platform for Salmonella typhimurium detection from chicken meat. | Sonna S, Srisawat C, Jampasa S, Chailapakul O, Hampson DJ, Prapasarakul N. | Vet Q | 10.1080/01652176.2025.2591482 | 2025 | |
| BIOHAZ scientific opinion on the equivalence of an alternative heat treatment process of feathers and down. | EFSA Panel on Biological Hazards (BIOHAZ), Allende A, Alvarez-Ordonez A, Bortolaia V, Bover-Cid S, Dohmen W, Guillier L, Herman L, Jacxsens L, Mughini-Gras L, Nauta M, Ottoson J, Peixe L, Perez-Rodriguez F, Skandamis P, Suffredini E, Griffin J, Escamez PF, Baptista C, Correia S, De Cesare A. | EFSA J | 10.2903/j.efsa.2025.9270 | 2025 | ||
| Detection of Salmonella enterica subsp. enterica via Quenching of Unincorporated Amplification Signal Reporters in Loop-Mediated Isothermal Amplification. | Halcon MHSC, Santos JAP, Lantican NB. | ScientificWorldJournal | 10.1155/2022/4567817 | 2022 | ||
| Evaluation of Biofilm Cultivation Models for Efficacy Testing of Disinfectants against Salmonella Typhimurium Biofilms. | Richter AM, Konrat K, Osland AM, Brook E, Oastler C, Vestby LK, Gosling RJ, Nesse LL, Arvand M. | Microorganisms | 10.3390/microorganisms11030761 | 2023 | ||
| Novel Heptaplex PCR-Based Diagnostics for Enteric Fever Caused by Typhoidal Salmonella Serovars and Its Applicability in Clinical Blood Culture. | Kim HJ, Jung Y, Kim MJ, Kim HY. | J Microbiol Biotechnol | 10.4014/jmb.2307.07031 | 2023 | ||
| Synergistically enhanced Salmonella Typhimurium reduction by sequential treatment of organic acids and atmospheric cold plasma and the mechanism study | Yadav B, Roopesh MS. | Food Microbiol | 2022 | |||
| Resistance Response and Regulatory Mechanisms of Ciprofloxacin-Induced Resistant Salmonella Typhimurium Based on Comprehensive Transcriptomic and Metabolomic Analysis | Yang X, Chu J, Huang L, Farhan M, Feng M, Bai J, Wang B, Cheng G. | Antibiotics (Basel) | 2025 | |||
| Serovars, virulence factors, and antimicrobial resistance profile of non-typhoidal Salmonella in the human-dairy interface in Northwest Ethiopia: A one health approach. | Beyene AM, Alemie Y, Gizachew M, Yousef AE, Dessalegn B, Bitew AB, Alemu A, Gobena W, Christian K, Gelaw B. | PLoS Negl Trop Dis | 10.1371/journal.pntd.0012646 | 2024 | ||
| Potential of an Isolated Bacteriophage to Inactivate Klebsiella pneumoniae: Preliminary Studies to Control Urinary Tract Infections. | Duarte J, Maximo C, Costa P, Oliveira V, Gomes NCM, Romalde JL, Pereira C, Almeida A. | Antibiotics (Basel) | 10.3390/antibiotics13020195 | 2024 | ||
| The Fascinating Cross-Paths of Pathogenic Bacteria, Human and Animal Faecal Sources in Water-Stressed Communities of Vhembe District, South Africa. | Mudau M, Ngobeni-Nyambi R, Momba MNB. | Pathogens | 10.3390/pathogens12091085 | 2023 | ||
| A Thermostable, Modified Cathelicidin-Derived Peptide With Enhanced Membrane-Active Activity Against Salmonella enterica serovar Typhimurium. | Klubthawee N, Aunpad R. | Front Microbiol | 10.3389/fmicb.2020.592220 | 2020 | ||
| Phytochemicals: potential alternative strategy to fight Salmonella enterica serovar Typhimurium. | Almuzaini AM. | Front Vet Sci | 10.3389/fvets.2023.1188752 | 2023 | ||
| Decontamination Effect of Hypochlorous Acid Dry Mist on Selected Bacteria, Viruses, Spores, and Fungi as Well as on Components of Electronic Systems. | Nasilowska B, Wlodarski M, Kaliszewski M, Bogdanowicz Z, Krzowski L, Kopczynski K, Witkowski G, Czeczott-Urban A, Bombalska A, Urbanska M, Garbat K, Sowinska A, Kutwin M, Koperski W, Wozniak R, Mierczyk Z. | Int J Mol Sci | 10.3390/ijms25137198 | 2024 | ||
| Functionalization of Polyhydroxyalkanoates (PHA)-Based Bioplastic with Phloretin for Active Food Packaging: Characterization of Its Mechanical, Antioxidant, and Antimicrobial Activities. | Mirpoor SF, Patane GT, Corrado I, Giosafatto CVL, Ginestra G, Nostro A, Foti A, Gucciardi PG, Mandalari G, Barreca D, Gervasi T, Pezzella C. | Int J Mol Sci | 10.3390/ijms241411628 | 2023 | ||
| Genetics | Genomic characterization of novel lytic phage vB_Sal_S6 with putative host FhuA interaction and its application for Salmonella biocontrol in milk. | Isaac AM, K P P, Mhatre CN, Kingston J J. | Sci Rep | 10.1038/s41598-025-24573-9 | 2025 | |
| An Edible Biopolymeric Microcapsular Wrapping Integrating Lytic Bacteriophage Particles for Salmonella enterica: Potential for Integration into Poultry Feed. | Pereira AO, Barros NMA, Guerrero BR, Emencheta SC, Baldo DA, Oliveira JM, Vila MMDC, Balcao VM. | Antibiotics (Basel) | 10.3390/antibiotics12060988 | 2023 | ||
| Effect of In Vitro Micropropagation on the Chemical, Antioxidant, and Biological Characteristics of Senecio nutans Sch. Bip., an Endemic Plant of the Atacama Desert Andean Region. | Parra C, Munoz-Torres P, Escobar H, Simirgiotis MJ, Contreras-Contreras G, Ruiz-Fernandez A, Maulen C, Martinez-Cifuentes M, Mariotti-Celis MS. | Plants (Basel) | 10.3390/plants13060755 | 2024 | ||
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| Multifunctional properties of Lactobacillus plantarum strains WiKim83 and WiKim87 as a starter culture for fermented food. | Jung JH, Kim SJ, Lee JY, Yoon SR, You SY, Kim SH. | Food Sci Nutr | 10.1002/fsn3.1075 | 2019 | ||
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| Structure Elucidation of Procyanidins Isolated from Rhododendron formosanum and Their Anti-Oxidative and Anti-Bacterial Activities. | Wang CM, Hsu YM, Jhan YL, Tsai SJ, Lin SX, Su CH, Chou CH. | Molecules | 10.3390/molecules200712787 | 2015 | ||
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| Essential Oils and Supercritical CO2 Extracts of Arctic Angelica (Angelica archangelica L.), Marsh Labrador Tea (Rhododendron tomentosum) and Common Tansy (Tanacetum vulgare)-Chemical Compositions and Antimicrobial Activities. | Korpinen RI, Valimaa AL, Liimatainen J, Kunnas S. | Molecules | 10.3390/molecules26237121 | 2021 | ||
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| First European Erwinia amylovora Lytic Bacteriophage Cocktails Effective in the Host: Characterization and Prospects for Fire Blight Biocontrol. | Biosca EG, Delgado Santander R, Moran F, Figas-Segura A, Vazquez R, Catala-Senent JF, Alvarez B. | Biology (Basel) | 10.3390/biology13030176 | 2024 | ||
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| Impact of the Resistance Responses to Stress Conditions Encountered in Food and Food Processing Environments on the Virulence and Growth Fitness of Non-Typhoidal Salmonellae. | Guillen S, Nadal L, Alvarez I, Manas P, Cebrian G. | Foods | 10.3390/foods10030617 | 2021 | ||
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| Lactiplantibacillus plantarum 1201 Inhibits Intestinal Infection of Salmonella enterica subsp. enterica Serovar Typhimurium Strain ATCC 13311 in Mice with High-Fat Diet. | Ren Z, Peng L, Chen S, Pu Y, Lv H, Wei H, Wan C | Foods | 10.3390/foods11010085 | 2021 | ||
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| Using Potential Lactic Acid Bacteria Biofilms and their Compounds to Control Biofilms of Foodborne Pathogens. | Tatsaporn T, Kornkanok K | Biotechnol Rep (Amst) | 10.1016/j.btre.2020.e00477 | 2020 | ||
| Pathogenicity | Abrasive brushing reduces pathogen biofilms at cantaloupe rind surface. | Fu Y, Bhunia AK, Yao Y | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2020.108685 | 2020 | |
| Phylogeny | Isolation of swine-derived Lactobacillus plantarum and its synergistic antimicrobial and health-promoting properties with ZnO nanoparticles. | Zheng L, Hu Y, He X, Zhao Y, Xu H | J Appl Microbiol | 10.1111/jam.14605 | 2020 | |
| Expression of DnaK and HtrA genes under high temperatures and their impact on thermotolerance of a Salmonella serotype isolated from tahini product. | Gaafar RM, Hamouda MM, El-Dougdoug KA, Fouad SF | J Genet Eng Biotechnol | 10.1186/s43141-019-0005-4 | 2019 | ||
| A Comparative Analysis of the Metabolomic Response of Electron Beam Inactivated E. coli O26:H11 and Salmonella Typhimurium ATCC 13311. | Bhatia SS, Pillai SD | Front Microbiol | 10.3389/fmicb.2019.00694 | 2019 | ||
| Biotechnology | Evaluation of Lactobacillus plantarum encapsulated with Eleutherine americana oligosaccharide extract as food additive in yoghurt. | Phoem AN, Mayiding A, Saedeh F, Permpoonpattana P | Braz J Microbiol | 10.1007/s42770-018-0017-2 | 2018 | |
| Atmospheric Cold Plasma Inactivation of Salmonella and Escherichia coli on the Surface of Golden Delicious Apples. | Kilonzo-Nthenge A, Liu S, Yannam S, Patras A | Front Nutr | 10.3389/fnut.2018.00120 | 2018 | ||
| Pathogenicity | Anti-adhesion of probiotic Enterococcus faecium WEFA23 against five pathogens and the beneficial effect of its S-layer proteins against Listeria monocytogenes. | He Y, Xu X, Zhang F, Xu D, Liu Z, Tao X, Wei H | Can J Microbiol | 10.1139/cjm-2018-0031 | 2018 | |
| Pathogenicity | A novel protocol for bacterial ghosts' preparation using tween 80. | Rabea S, Salem-Bekhit MM, Alanazi FK, Yassin AS, Moneib NA, Hashem AEM | Saudi Pharm J | 10.1016/j.jsps.2017.12.006 | 2017 | |
| Pathogenicity | Membrane-acting bacteriocin purified from a soil isolate Pediococcus pentosaceus LB44 shows broad host-range. | Kaur R, Tiwari SK | Biochem Biophys Res Commun | 10.1016/j.bbrc.2018.03.062 | 2018 | |
| Pathogenicity | Microbial inactivation and cytotoxicity evaluation of UV irradiated coconut water in a novel continuous flow spiral reactor. | Bhullar MS, Patras A, Kilanzo-Nthenge A, Pokharel B, Yannam SK, Rakariyatham K, Pan C, Xiao H, Sasges M | Food Res Int | 10.1016/j.foodres.2017.10.004 | 2017 | |
| Pathogenicity | Characterization and bioactivities of the exopolysaccharide from a probiotic strain of Lactobacillus plantarum WLPL04. | Liu Z, Zhang Z, Qiu L, Zhang F, Xu X, Wei H, Tao X | J Dairy Sci | 10.3168/jds.2016-11944 | 2017 | |
| Pathogenicity | In vitro assessment of Pediococcus acidilactici Kp10 for its potential use in the food industry. | Abbasiliasi S, Tan JS, Bashokouh F, Ibrahim TAT, Mustafa S, Vakhshiteh F, Sivasamboo S, Ariff AB | BMC Microbiol | 10.1186/s12866-017-1000-z | 2017 | |
| Pathogenicity | Pathogen biofilm formation on cantaloupe surface and its impact on the antibacterial effect of lauroyl arginate ethyl. | Fu Y, Deering AJ, Bhunia AK, Yao Y | Food Microbiol | 10.1016/j.fm.2016.12.020 | 2016 | |
| Pathogenicity | Synthesis of New Fluoro-Benzimidazole Derivatives as an Approach towards the Discovery of Novel Intestinal Antiseptic Drug Candidates. | Cevik UA, Saglik BN, Ozkay Y, Canturk Z, Bueno J, Demirci F, Koparal AS | Curr Pharm Des | 10.2174/1381612822666161201150131 | 2017 | |
| Pathogenicity | Evaluation of probiotic properties of Lactobacillus plantarum WLPL04 isolated from human breast milk. | Jiang M, Zhang F, Wan C, Xiong Y, Shah NP, Wei H, Tao X | J Dairy Sci | 10.3168/jds.2015-10434 | 2016 | |
| Enzymology | Prenylated polyphenolic compounds from Glycyrrhiza iconica and their antimicrobial and antioxidant activities. | Kirmizibekmez H, Uysal GB, Masullo M, Demirci F, Bagci Y, Kan Y, Piacente S | Fitoterapia | 10.1016/j.fitote.2015.05.003 | 2015 | |
| Biotechnology | Bacteriophage cocktail for biocontrol of Salmonella in dried pet food. | Heyse S, Hanna LF, Woolston J, Sulakvelidze A, Charbonneau D | J Food Prot | 10.4315/0362-028X.JFP-14-041 | 2015 | |
| Genetics | First Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Typhimurium Strain ATCC 13311 (NCTC 74), a Reference Strain of Multidrug Resistance, as Achieved by Use of PacBio Single-Molecule Real-Time Technology. | Terabayashi Y, Juan A, Tamotsu H, Ashimine N, Nakano K, Shimoji M, Shiroma A, Teruya K, Satou K, Hirano T | Genome Announc | 10.1128/genomeA.00986-14 | 2014 | |
| Biotechnology | Development of a sigDE-based real-time reverse-transcriptase PCR for the detection of viable Salmonella enterica. | Zhou M, Yang J, Zhou X, Liu B, Liu D, Yuan C, He Y, Pan L, Shi X | Foodborne Pathog Dis | 10.1089/fpd.2013.1701 | 2014 | |
| Pathogenicity | Biochemical and antimicrobial activity of phloretin and its glycosilated derivatives present in apple and kumquat. | Barreca D, Bellocco E, Lagana G, Ginestra G, Bisignano C | Food Chem | 10.1016/j.foodchem.2014.03.118 | 2014 | |
| Biotechnology | Bioprotection of ready-to-eat probiotic artichokes processed with Lactobacillus paracasei LMGP22043 against foodborne pathogens. | Valerio F, Lonigro SL, Di Biase M, de Candia S, Callegari ML, Lavermicocca P | J Food Sci | 10.1111/1750-3841.12282 | 2013 | |
| Pathogenicity | Growth-Inhibiting and morphostructural effects of constituents identified in Asarum heterotropoides root on human intestinal bacteria. | Perumalsamy H, Jung MY, Hong SM, Ahn YJ | BMC Complement Altern Med | 10.1186/1472-6882-13-245 | 2013 | |
| Pathogenicity | Antibacterial soybean-oil-based cationic polyurethane coatings prepared from different amino polyols. | Xia Y, Zhang Z, Kessler MR, Brehm-Stecher B, Larock RC | ChemSusChem | 10.1002/cssc.201200352 | 2012 | |
| Pathogenicity | Study on antibacterial alginate-stabilized copper nanoparticles by FT-IR and 2D-IR correlation spectroscopy. | Diaz-Visurraga J, Daza C, Pozo C, Becerra A, von Plessing C, Garcia A | Int J Nanomedicine | 10.2147/IJN.S32648 | 2012 | |
| Phylogeny | Isolation and characterization of Lactobacillus salivarius MTC 1026 as a potential probiotic. | Tinrat S, Saraya S, Traidej Chomnawang M | J Gen Appl Microbiol | 10.2323/jgam.57.365 | 2011 | |
| Pathogenicity | Evidence of significant synergism between antibiotics and the antipsychotic, antimicrobial drug flupenthixol. | Jeyaseeli L, Dasgupta A, Dastidar SG, Molnar J, Amaral L | Eur J Clin Microbiol Infect Dis | 10.1007/s10096-011-1435-3 | 2011 | |
| Composition and antimicrobial activity of Seseli globiferum essential oil. | Janackovic P, Sokovic M, Vujisic L, Vajs V, Vuckovic I, Krivosej Z, Marin PD | Nat Prod Commun | 2011 | |||
| Pathogenicity | Effect of L. plantarum cell-free extract and co-trimoxazole against Salmonella Typhimurium: a possible adjunct therapy. | Rishi P, Preet S, Kaur P | Ann Clin Microbiol Antimicrob | 10.1186/1476-0711-10-9 | 2011 | |
| Pathogenicity | Antibacterial and antifungal activities from Siamese crocodile blood. | Leelawongtawon R, Siruntawineti J, Chaeychomsri W, Sattaponpan C | J Med Assoc Thai | 2010 | ||
| Cross-reactivity of anti-Salmonella egg-yolk antibodies to Salmonella serovars. | Biswas D, Herrera P, Fang L, Marquardt RR, Ricke SC | J Environ Sci Health B | 10.1080/10934521003709016 | 2010 | ||
| An Investigation on in vitro and in vivo Antimicrobial Properties of the Antidepressant: Amitriptyline Hydrochloride. | Mandal A, Sinha C, Kumar Jena A, Ghosh S, Samanta A | Braz J Microbiol | 10.1590/S1517-83822010000300014 | 2010 | ||
| Pathogenicity | Efficacy of sumac and oregano in the inactivation of Salmonella Typhimurium on tomatoes. | Gunduz GT, Gonul SA, Karapinar M | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2010.04.021 | 2010 | |
| Pathogenicity | Cryptdin-2: a novel therapeutic agent for experimental Salmonella Typhimurium infection. | Preet S, Verma I, Rishi P | J Antimicrob Chemother | 10.1093/jac/dkq066 | 2010 | |
| Pathogenicity | Potent bactericidal action of a flavonoid fraction isolated from the stem bark of Butea frondosa. | Mishra US, Chakraborty P, Dasgupta A, Dastidar SG, Martins M, Amaral L | In Vivo | 2009 | ||
| Pathogenicity | Efficacy of myrtle oil against Salmonella Typhimurium on fresh produce. | Gunduz GT, Gonul SA, Karapinar M | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2009.01.010 | 2009 | |
| Biotechnology | Quantifying the effects of heating temperature, and combined effects of heating medium pH and recovery medium pH on the heat resistance of Salmonella typhimurium. | Leguerinel I, Spegagne I, Couvert O, Coroller L, Mafart P | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2006.12.016 | 2007 | |
| Pathogenicity | In vitro and in vivo antimicrobial action of tea: the commonest beverage of Asia. | Bandyopadhyay D, Chatterjee TK, Dasgupta A, Lourduraja J, Dastidar SG | Biol Pharm Bull | 10.1248/bpb.28.2125 | 2005 | |
| Pathogenicity | Detection of mutations in Salmonella enterica gyrA, gyrB, parC and parE genes by denaturing high performance liquid chromatography (DHPLC) using standard HPLC instrumentation. | Randall LP, Coldham NG, Woodward MJ | J Antimicrob Chemother | 10.1093/jac/dki293 | 2005 | |
| Pathogenicity | Experimental analysis of antimicrobial action of dicyclomine hydrochloride. | Karaka P, Kumar KA, Basu LR, Dasgupta A, Ray R, Dastidar SG | Biol Pharm Bull | 10.1248/bpb.27.2010 | 2004 | |
| Pathogenicity | Triflupromazine: a microbicide non-antibiotic compound. | Dastidar SG, Debnath S, Mazumdar K, Ganguly K, Chakrabarty AN | Acta Microbiol Immunol Hung | 2004 | ||
| Pathogenicity | Amlodipine: a cardiovascular drug with powerful antimicrobial property. | Kumar KA, Ganguly K, Mazumdar K, Dutta NK, Dastidar SG, Chakrabarty AN | Acta Microbiol Pol | 2003 | ||
| Pathogenicity | Antibacterial potential of an antispasmodic drug dicyclomine hydrochloride. | Karak P, Kumar KA, Mazumdar K, Mookerjee M, Dastidar SG | Indian J Med Res | 2003 | ||
| Enzymology | Mutations in topoisomerase genes of fluoroquinolone-resistant salmonellae in Hong Kong. | Ling JM, Chan EW, Lam AW, Cheng AF | Antimicrob Agents Chemother | 10.1128/AAC.47.11.3567-3573.2003 | 2003 | |
| Biotechnology | Predicting thermal inactivation in media of different pH of Salmonella grown at different temperatures. | Manas P, Pagan R, Raso J, Condon S | Int J Food Microbiol | 10.1016/s0168-1605(03)00049-7 | 2003 | |
| Pathogenicity | Antimicrobial potentiality of a phenothiazine group of antipsychotic drug-prochlorperazine. | Mazumder R, Chaudhuri SR, Mazumder A | Indian J Exp Biol | 2002 | ||
| Metabolism | Characterization of a highly attenuated Salmonella enterica serovar Typhimurium mutant strain. | Tang IK, Ji DD, Chou CF, Lin HC, Liao CL, Sytwu HK, Wang JJ, Liu YT | J Microbiol Immunol Infect | 2002 | ||
| Pathogenicity | Trifluoperazine: a broad spectrum bactericide especially active on staphylococci and vibrios. | Mazumder R, Ganguly K, Dastidar SG, Chakrabarty AN | Int J Antimicrob Agents | 10.1016/s0924-8579(01)00324-7 | 2001 | |
| Stress | Effect of sodium chloride concentration on the heat resistance and recovery of Salmonella typhimurium. | Manas P, Pagan R, Leguerinel I, Condon S, Mafart P, Sala F | Int J Food Microbiol | 10.1016/s0168-1605(00)00423-2 | 2001 | |
| Phylogeny | Probability of detection of Salmonella using different analytical procedures, with emphasis on subspecies diarizonae serovar 61:k:1,5,(7) [S. IIIb 61:k:1,5,(7)]. | Alvseike O, Skjerve E | Int J Food Microbiol | 10.1016/s0168-1605(00)00261-0 | 2000 | |
| Biotechnology | Inactivation of Salmonella Enteritidis, Salmonella Typhimurium, and Salmonella Senftenberg by ultrasonic waves under pressure. | Manas P, Pagan R, Raso J, Sala FJ, Condon S | J Food Prot | 10.4315/0362-028x-63.4.451 | 2000 | |
| Metabolism | Physiological effects of high hydrostatic pressure treatments on Listeria monocytogenes and Salmonella typhimurium. | Tholozan JL, Ritz M, Jugiau F, Federighi M, Tissier JP | J Appl Microbiol | 10.1046/j.1365-2672.2000.00917.x | 2000 | |
| Biotechnology | Shelf life extension, safety, and quality of fresh pork loin treated with high hydrostatic pressure. | Ananth V, Dickson JS, Olson DG, Murano EA | J Food Prot | 10.4315/0362-028x-61.12.1649 | 1998 | |
| Phylogeny | Role of mutation in the gyrA and parC genes of nalidixic-acid-resistant salmonella serotypes isolated from animals in the United Kingdom. | Piddock LJ, Ricci V, McLaren I, Griggs DJ | J Antimicrob Chemother | 10.1093/jac/41.6.635 | 1998 | |
| Pathogenicity | Antibacterial activity of the antiinflammatory agent diclofenac sodium. | Annadurai S, Basu S, Ray S, Dastidar SG, Chakrabarty AN | Indian J Exp Biol | 1998 | ||
| Enzymology | Lactoferrin interaction with salmonellae potentiates antibiotic susceptibility in vitro. | Naidu AS, Arnold RR | Diagn Microbiol Infect Dis | 10.1016/0732-8893(94)90094-9 | 1994 | |
| Pathogenicity | Studies on the existence of synergism between different antibiotics and a phenothiazine tranquilizer, promazine, possessing antimicrobial property. | Dastidar SG, Chakraborty P, Mookerjee M, Ganguly M, Chakrabarty AN | Acta Microbiol Immunol Hung | 1994 | ||
| Pathogenicity | Bactericidal activity of C9-deficient human serum. | Pramoonjago P, Kinoshita T, Hong KS, Takata-Kozono Y, Kozono H, Inagi R, Inoue K | J Immunol | 1992 | ||
| Active Thermoplastic Starch Film with Watermelon Rind Extract for Future Biodegradable Food Packaging. | Todhanakasem T, Jaiprayat C, Sroysuwan T, Suksermsakul S, Suwapanich R, Maleenont KK, Koombhongse P, Young BM | Polymers (Basel) | 10.3390/polym14163232 | 2022 | ||
| Polyphasic Characterisation of Cedecea colo sp. nov., a New Enteric Bacterium Isolated from the Koala Hindgut. | Boath JM, Dakhal S, Van TTH, Moore RJ, Dekiwadia C, Macreadie IG. | Microorganisms | 10.3390/microorganisms8020309 | 2020 | ||
| Phylogeny | Trabulsiella odontotermitis sp. nov., isolated from the gut of the termite Odontotermes formosanus Shiraki. | Chou JH, Chen WM, Arun AB, Young CC | Int J Syst Evol Microbiol | 10.1099/ijs.0.64632-0 | 2007 |
| #2225 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5569 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #36616 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #119045 | Collection of Institut Pasteur ; Curators of the CIP; CIP 58.58 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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