Salmonella enterica DSM 18522 is a bacterium of the family Enterobacteriaceae.
genome sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Salmonella |
| Species Salmonella enterica |
| Full scientific name Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987 |
| Synonyms (9) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 7575 | TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545) | Medium recipe at MediaDive | Name: TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545) Composition: Casein peptone 17.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l D(+)-Glucose 2.5 g/l K2HPO4 2.5 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 7575 | positive | growth | 37 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 68368 | 29016 ChEBI | arginine | + | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | + | assimilation | from API 20E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 68368 | 28053 ChEBI | melibiose | + | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | + | fermentation | from API 20E |
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 68368 | 30911 ChEBI | sorbitol | + | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68368 | gelatinase | - | from API 20E | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7575 | - | + | + | + | + | + | - | - | - | - | - | + | + | + | + | + | - | + | - | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
| @ref | Name | Strain number | |
|---|---|---|---|
| 124042 | Salmonella phage P22 (Salmonella virus P22) | DSM 18522 | |
| 124042 | Salmonella phage Felix O1 | DSM 18522 | |
| 124042 | Salmonella phage vB_SenS-PT-JD21 | DSM 18522 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 124043 | ASM2286996v1 assembly for Salmonella enterica subsp. enterica PartC-Senterica-RM8376 | complete | 59201 | 99.23 | |||
| 124043 | ASM1602671v1 assembly for Salmonella enterica FDAARGOS_928 | complete | 28901 | 99.23 | |||
| 124043 | ASM636533v1 assembly for Salmonella enterica FDAARGOS_768 | complete | 28901 | 99.03 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 85.30 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 76.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 92.70 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 88.60 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 100.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 94.51 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 89.03 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.00 | no |
| 125438 | aerobic | aerobicⓘ | no | 75.26 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 76.53 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Reduction of Salmonella enterica in Turkey breast slices kept under aerobic and vacuum conditions by application of lactic acid, a bacteriophage, and ultrasound | Aykin-Dincer E, Ergin F, Kucukcetin A. | Journal of food safety. | 2023 | |||
| Protecting bacteriophages under UV irradiation with brilliant blue FCF for targeted bacterial control | Wdowiak M, Magiera A, Tomczynska M, Adamkiewicz W, Stellacci F, Paczesny J. | Biofilm | 2025 | |||
| Genetics | Genomic and functional characterization of five novel Salmonella-targeting bacteriophages. | Kuzminska-Bajor M, Sliwka P, Ugorski M, Korzeniowski P, Skaradzinska A, Kuczkowski M, Narajaczyk M, Wieliczko A, Kolenda R. | Virol J | 10.1186/s12985-021-01655-4 | 2021 | |
| Persistence of Salmonella Typhimurium LT2 in Soil Enhanced after Growth in Lettuce Medium. | Fornefeld E, Schierstaedt J, Jechalke S, Grosch R, Schikora A, Smalla K. | Front Microbiol | 10.3389/fmicb.2017.00757 | 2017 | ||
| Salmonella Establishment in Agricultural Soil and Colonization of Crop Plants Depend on Soil Type and Plant Species. | Jechalke S, Schierstaedt J, Becker M, Flemer B, Grosch R, Smalla K, Schikora A. | Front Microbiol | 10.3389/fmicb.2019.00967 | 2019 | ||
| SHASI-ML: a machine learning-based approach for immunogenicity prediction in Salmonella vaccine development. | Spiga O, Visibelli A, Pettini F, Roncaglia B, Santucci A. | Front Cell Infect Microbiol | 10.3389/fcimb.2025.1536156 | 2025 | ||
| Rapid, low-cost colorimetric detection of Salmonella Typhi bacteriophages for environmental surveillance. | da Silva KE, Yokoyama T, Naga SR, Maharjan M, Pereira Dos Santos PC, Fisher KN, Coulibaly JT, Yang MZ, Nelson EJ, Charles RC, Shafer K, Igiraneza B-L, Yusuf S, Mulder E, Neuzil K, Bogoch II, Shrestha R, Tamrakar D, Andrews JR. | mBio | 10.1128/mbio.01963-25 | 2025 | ||
| Pathogenicity | The Yin and Yang of pathogens and probiotics: interplay between Salmonella enterica sv. Typhimurium and Bifidobacterium infantis during co-infection. | Shaw C, Weimer BC, Gann R, Desai PT, Shah JD. | Front Microbiol | 10.3389/fmicb.2024.1387498 | 2024 | |
| Fluoroquinolone and beta-lactam antimicrobials induce different transcriptome profiles in Salmonella enterica persister cells. | Mattiello SP, Barth VC, Scaria J, Ferreira CAS, Oliveira SD. | Sci Rep | 10.1038/s41598-023-46142-8 | 2023 | ||
| Ligilactobacillus salivarius 7247 Strain: Probiotic Properties and Anti-Salmonella Effect with Prebiotics. | Abramov VM, Kosarev IV, Machulin AV, Deryusheva EI, Priputnevich TV, Panin AN, Chikileva IO, Abashina TN, Manoyan AM, Ahmetzyanova AA, Ivanova OE, Papazyan TT, Nikonov IN, Suzina NE, Melnikov VG, Khlebnikov VS, Sakulin VK, Samoilenko VA, Gordeev AB, Sukhikh GT, Uversky VN. | Antibiotics (Basel) | 10.3390/antibiotics12101535 | 2023 | ||
| Mapping of conserved immunodominant epitope peptides in the outer membrane porin (Omp) L of prominent Enterobacteriaceae pathogens associated with gastrointestinal infections. | Kolla HB, Makam SS, Reddy PN. | J Genet Eng Biotechnol | 10.1186/s43141-023-00622-6 | 2023 | ||
| Pathogenicity | Overcoming reduced antibiotic susceptibility in intracellular Salmonella enterica serovar Typhimurium using AR-12. | Zahid MSH, Varma DM, Johnson MM, Landavazo A, Bachelder EM, Blough BE, Ainslie KM. | FEMS Microbiol Lett | 10.1093/femsle/fnab062 | 2021 | |
| Inactivation kinetics of selected pathogenic and non-pathogenic bacteria by aqueous ozone to validate minimum usage in purified water. | Lou Y, Kasler DR, Hawkins ZL, Li Z, Sannito D, Fritz RD, Yousef AE. | Front Microbiol | 10.3389/fmicb.2023.1258381 | 2023 | ||
| In-Depth Study of Thymus vulgaris Essential Oil: Towards Understanding the Antibacterial Target Mechanism and Toxicological and Pharmacological Aspects. | Akermi S, Smaoui S, Fourati M, Elhadef K, Chaari M, Chakchouk Mtibaa A, Mellouli L. | Biomed Res Int | 10.1155/2022/3368883 | 2022 | ||
| Isolation and Characterization of Lactic Acid Bacteria With Probiotic Attributes From Different Parts of the Gastrointestinal Tract of Free-living Wild Boars in Hungary. | Kereszteny T, Libisch B, Orbe SC, Nagy T, Kerenyi Z, Kocsis R, Posta K, Papp PP, Olasz F. | Probiotics Antimicrob Proteins | 10.1007/s12602-023-10113-2 | 2024 | ||
| Cupressus sempervirens Essential Oil: Exploring the Antibacterial Multitarget Mechanisms, Chemcomputational Toxicity Prediction, and Safety Assessment in Zebrafish Embryos. | Akermi S, Smaoui S, Elhadef K, Fourati M, Louhichi N, Chaari M, Chakchouk Mtibaa A, Baanannou A, Masmoudi S, Mellouli L. | Molecules | 10.3390/molecules27092630 | 2022 | ||
| Limosilactobacillus fermentum Strain 3872: Antibacterial and Immunoregulatory Properties and Synergy with Prebiotics against Socially Significant Antibiotic-Resistant Infections of Animals and Humans. | Abramov VM, Kosarev IV, Machulin AV, Priputnevich TV, Chikileva IO, Deryusheva EI, Abashina TN, Donetskova AD, Panin AN, Melnikov VG, Suzina NE, Nikonov IN, Selina MV, Khlebnikov VS, Sakulin VK, Vasilenko RN, Samoilenko VA, Uversky VN, Karlyshev AV. | Antibiotics (Basel) | 10.3390/antibiotics11101437 | 2022 | ||
| Bioinspired Superhydrophobic Nanocoating Based on Polydopamine and Nanodiamonds to Mitigate Bacterial Attachment to Polyvinyl Chloride Surfaces in Food Industry Environments. | DeFlorio W, Zaza A, Arcot Y, Min Y, Castillo A, Taylor M, Cisneros-Zevallos L, Akbulut MES. | Ind Eng Chem Res | 10.1021/acs.iecr.3c04230 | 2024 | ||
| Factors Affecting Growth and Survival of Salmonella in Onion Extracts and Onion Bulbs. | Kiplagat E, Ramezani M, Malla S, Cisneros-Zevallos L, Joshi V, Castillo A. | Foods | 10.3390/foods14010001 | 2024 | ||
| Disclosing the Functional Potency of Three Oxygenated Monoterpenes in Combating Microbial Pathogenesis: From Targeting Virulence Factors to Chicken Meat Preservation. | Akermi S, Chaari M, Elhadef K, Fourati M, Chakchouk Mtibaa A, Agriopoulou S, Smaoui S, Mellouli L. | Foods | 10.3390/foods13060965 | 2024 | ||
| Engineering and Evaluation of a Live-Attenuated Vaccine Candidate with Enhanced Type 1 Fimbriae Expression to Optimize Protection Against Salmonella Typhimurium. | Garcia P, Rodriguez-Coello A, Garcia-Pose A, Fernandez-Lopez MDC, Muras A, Moscoso M, Beceiro A, Bou G. | Vaccines (Basel) | 10.3390/vaccines13060659 | 2025 | ||
| Metabolism | The Salmonella enterica serovar Typhimurium virulence factor STM3169 is a hexuronic acid binding protein component of a TRAP transporter. | Herman R, Bennett-Ness C, Maqbool A, Afzal A, Leech A, Thomas GH. | Microbiology (Reading) | 10.1099/mic.0.000967 | 2020 | |
| Essential Oil Analysis and Antimicrobial Evaluation of Three Aromatic Plant Species Growing in Saudi Arabia. | El-Said H, Ashgar SS, Bader A, AlQathama A, Halwani M, Ascrizzi R, Flamini G. | Molecules | 10.3390/molecules26040959 | 2021 | ||
| Development of Polymerase Chain Reaction-High-Resolution Melt Assay for Waterborne Pathogens Legionella pneumophila, Vibrio parahaemolyticus, and Camplobacter jejuni. | Carr SM, Elkins KM. | Microorganisms | 10.3390/microorganisms12071366 | 2024 | ||
| Metabolism | Flavodoxins as Novel Therapeutic Targets against Helicobacter pylori and Other Gastric Pathogens. | Salillas S, Sancho J. | Int J Mol Sci | 10.3390/ijms21051881 | 2020 | |
| Resuscitation dynamics reveal persister partitioning after antibiotic treatment. | Fang X, Allison KR. | Mol Syst Biol | 10.15252/msb.202211320 | 2023 | ||
| Pathogenicity | The mitochondrial UPR regulator ATF5 promotes intestinal barrier function via control of the satiety response. | Chamseddine D, Mahmud SA, Westfall AK, Castoe TA, Berg RE, Pellegrino MW. | Cell Rep | 10.1016/j.celrep.2022.111789 | 2022 | |
| Structural basis of the bacterial flagellar motor rotational switching. | Tan J, Zhang L, Zhou X, Han S, Zhou Y, Zhu Y. | Cell Res | 10.1038/s41422-024-01017-z | 2024 | ||
| Metabolism | Acetylation coordinates the crosstalk between carbon metabolism and ammonium assimilation in Salmonella enterica. | Sun Y, Zhang Y, Zhao T, Luan Y, Wang Y, Yang C, Shen B, Huang X, Li G, Zhao S, Zhao GP, Wang Q. | EMBO J | 10.15252/embj.2022112333 | 2023 | |
| Metabolism | MicroRNA responses associated with Salmonella enterica serovar typhimurium challenge in peripheral blood: effects of miR-146a and IFN-gamma in regulation of fecal bacteria shedding counts in pig. | Huang T, Huang X, Chen W, Yin J, Shi B, Wang F, Feng W, Yao M. | BMC Vet Res | 10.1186/s12917-019-1951-4 | 2019 | |
| Metabolism | Bacteriophage SP6 encodes a second tailspike protein that recognizes Salmonella enterica serogroups C2 and C3. | Gebhart D, Williams SR, Scholl D. | Virology | 10.1016/j.virol.2017.02.025 | 2017 | |
| Reduction of Bacterial Enteric Pathogens and Hygiene Indicator Bacteria on Tomato Skin Surfaces by a Polymeric Nanoparticle-Loaded Plant-Derived Antimicrobial. | Perez-Lewis KL, Yegin Y, Oh JK, Castillo A, Cisneros-Zevallos L, Kerth CR, Akbulut M, Taylor TM. | Microorganisms | 10.3390/microorganisms10020448 | 2022 | ||
| High Resolution Melt Assays to Detect and Identify Vibrio parahaemolyticus, Bacillus cereus, Escherichia coli, and Clostridioides difficile Bacteria. | Bender AC, Faulkner JA, Tulimieri K, Boise TH, Elkins KM. | Microorganisms | 10.3390/microorganisms8040561 | 2020 | ||
| Pathogenicity | Alterations of Salmonella enterica Serovar Typhimurium Antibiotic Resistance under Environmental Pressure. | Peng M, Salaheen S, Buchanan RL, Biswas D. | Appl Environ Microbiol | 10.1128/aem.01173-18 | 2018 | |
| Pathogenicity | Targeting essential genes in Salmonella enterica serovar typhimurium with antisense peptide nucleic acid. | Soofi MA, Seleem MN. | Antimicrob Agents Chemother | 10.1128/aac.01437-12 | 2012 | |
| Metabolism | Single-Cell and Time-Resolved Profiling of Intracellular Salmonella Metabolism in Primary Human Cells. | Xu J, Preciado-Llanes L, Aulicino A, Decker CM, Depke M, Gesell Salazar M, Schmidt F, Simmons A, Huang WE. | Anal Chem | 10.1021/acs.analchem.9b01010 | 2019 | |
| Programming bacteria for multiplexed DNA detection. | Cheng YY, Chen Z, Cao X, Ross TD, Falbel TG, Burton BM, Venturelli OS. | Nat Commun | 10.1038/s41467-023-37582-x | 2023 | ||
| Metabolism | Identification of a Novel Salmonella Type III Effector by Quantitative Secretome Profiling. | Cheng S, Wang L, Liu Q, Qi L, Yu K, Wang Z, Wu M, Liu Y, Fu J, Hu M, Li M, Zhou D, Liu X. | Mol Cell Proteomics | 10.1074/mcp.ra117.000230 | 2017 | |
| Quantitative dynamics of Salmonella and E. coli in feces of feedlot cattle treated with ceftiofur and chlortetracycline. | Ohta N, Norby B, Loneragan GH, Vinasco J, den Bakker HC, Lawhon SD, Norman KN, Scott HM. | PLoS One | 10.1371/journal.pone.0225697 | 2019 | ||
| Phylogeny | Genetic characterization of atypical Citrobacter freundii. | Delgado G, Souza V, Morales R, Cerritos R, Gonzalez-Gonzalez A, Mendez JL, Vazquez V, Cravioto A. | PLoS One | 10.1371/journal.pone.0074120 | 2013 | |
| Influence of Surface Roughness, Nanostructure, and Wetting on Bacterial Adhesion. | Mu M, Liu S, DeFlorio W, Hao L, Wang X, Salazar KS, Taylor M, Castillo A, Cisneros-Zevallos L, Oh JK, Min Y, Akbulut M. | Langmuir | 10.1021/acs.langmuir.3c00091 | 2023 | ||
| Metabolism | Migration of Type III Secretion System Transcriptional Regulators Links Gene Expression to Secretion. | Charova SN, Gazi AD, Mylonas E, Pozidis C, Sabarit B, Anagnostou D, Psatha K, Aivaliotis M, Beuzon CR, Panopoulos NJ, Kokkinidis M. | mBio | 10.1128/mbio.01096-18 | 2018 | |
| One Hundred Faces of Geraniol. | Maczka W, Winska K, Grabarczyk M. | Molecules | 10.3390/molecules25143303 | 2020 | ||
| Salmonella Degrades the Host Glycocalyx Leading to Altered Infection and Glycan Remodeling. | Arabyan N, Park D, Foutouhi S, Weis AM, Huang BC, Williams CC, Desai P, Shah J, Jeannotte R, Kong N, Lebrilla CB, Weimer BC. | Sci Rep | 10.1038/srep29525 | 2016 | ||
| Metabolism | Environmental Metabolomics of the Tomato Plant Surface Provides Insights on Salmonella enterica Colonization. | Han S, Micallef SA. | Appl Environ Microbiol | 10.1128/aem.00435-16 | 2016 | |
| Uncovering lipopolysaccharide regulation in bacteria via the critical lipid binding tunnel of YciS/YciM. | Yan L, Dong H, Li H, Liu X, Deng Z, Dong C, Zhang Z. | iScience | 10.1016/j.isci.2022.104988 | 2022 | ||
| Genetic mechanisms underlying the pathogenicity of cold-stressed Salmonella enterica serovar typhimurium in cultured intestinal epithelial cells. | Shah J, Desai PT, Weimer BC. | Appl Environ Microbiol | 10.1128/aem.01994-14 | 2014 | ||
| Metabolism | The bacterial MrpORP is a novel Mrp/NBP35 protein involved in iron-sulfur biogenesis. | Pardoux R, Fievet A, Carreira C, Brochier-Armanet C, Valette O, Dermoun Z, Py B, Dolla A, Pauleta SR, Aubert C. | Sci Rep | 10.1038/s41598-018-37021-8 | 2019 | |
| Pathogenicity | Preadaptation to cold stress in Salmonella enterica serovar Typhimurium increases survival during subsequent acid stress exposure. | Shah J, Desai PT, Chen D, Stevens JR, Weimer BC. | Appl Environ Microbiol | 10.1128/aem.02621-13 | 2013 | |
| Pathogenicity | In vitro antibacterial activity of Loxostylis alata extracts and isolated compounds against Salmonella species. | Gado DA, Abdalla MA, Ahmed AS, Madikizela B, Nkadimeng SM, Ehlers MM, McGaw LJ. | BMC Complement Med Ther | 10.1186/s12906-021-03292-4 | 2021 | |
| Preclinical Immunogenicity and Efficacy of Optimized O25b O-Antigen Glycoconjugates To Prevent MDR ST131 E. coli Infections. | Chorro L, Li Z, Chu L, Singh S, Gu J, Kim JH, Dutta K, Pan R, Kodali S, Ndreu D, Patel A, Hawkins JC, Ponce C, Silmon de Monerri N, Keeney D, Illenberger A, Jones CH, Andrew L, Lotvin J, Prasad AK, Kanevsky I, Jansen KU, Anderson AS, Donald RGK. | Infect Immun | 10.1128/iai.00022-22 | 2022 | ||
| HSPA8 regulates anti-bacterial autophagy through liquid-liquid phase separation. | Miao C, Zhang Y, Yu M, Wei Y, Dong C, Pei G, Xiao Y, Yang J, Yao Z, Wang Q. | Autophagy | 10.1080/15548627.2023.2223468 | 2023 | ||
| Transcriptome | Dual transcriptome based reconstruction of Salmonella-human integrated metabolic network to screen potential drug targets. | Kocabas K, Arif A, Uddin R, Cakir T. | PLoS One | 10.1371/journal.pone.0268889 | 2022 | |
| Metabolism | tRNA Methylation Is a Global Determinant of Bacterial Multi-drug Resistance. | Masuda I, Matsubara R, Christian T, Rojas ER, Yadavalli SS, Zhang L, Goulian M, Foster LJ, Huang KC, Hou YM. | Cell Syst | 10.1016/j.cels.2019.03.008 | 2019 | |
| Metabolism | SIK2 orchestrates actin-dependent host response upon Salmonella infection. | Hahn M, Covarrubias-Pinto A, Herhaus L, Satpathy S, Klann K, Boyle KB, Munch C, Rajalingam K, Randow F, Choudhary C, Dikic I. | Proc Natl Acad Sci U S A | 10.1073/pnas.2024144118 | 2021 | |
| Metabolism | Anaerobic production of medium-chain fatty alcohols via a beta-reduction pathway. | Mehrer CR, Incha MR, Politz MC, Pfleger BF. | Metab Eng | 10.1016/j.ymben.2018.05.011 | 2018 | |
| Metabolism | DUF3380 Domain from a Salmonella Phage Endolysin Shows Potent N-Acetylmuramidase Activity. | Rodriguez-Rubio L, Gerstmans H, Thorpe S, Mesnage S, Lavigne R, Briers Y. | Appl Environ Microbiol | 10.1128/aem.00446-16 | 2016 | |
| Metabolism | Salmonella Typhimurium Enzymatically Landscapes the Host Intestinal Epithelial Cell (IEC) Surface Glycome to Increase Invasion. | Park D, Arabyan N, Williams CC, Song T, Mitra A, Weimer BC, Maverakis E, Lebrilla CB. | Mol Cell Proteomics | 10.1074/mcp.m116.063206 | 2016 | |
| Biotechnology | Limited genetic diversity in Salmonella enterica serovar Enteritidis PT13. | Olson AB, Andrysiak AK, Tracz DM, Guard-Bouldin J, Demczuk W, Ng LK, Maki A, Jamieson F, Gilmour MW. | BMC Microbiol | 10.1186/1471-2180-7-87 | 2007 | |
| Is There Potential for Repurposing Statins as Novel Antimicrobials? | Hennessy E, Adams C, Reen FJ, O'Gara F. | Antimicrob Agents Chemother | 10.1128/aac.00192-16 | 2016 | ||
| Metabolism | Autonomous bacterial nanoswimmers target cancer. | Zoaby N, Shainsky-Roitman J, Badarneh S, Abumanhal H, Leshansky A, Yaron S, Schroeder A. | J Control Release | 10.1016/j.jconrel.2016.10.006 | 2017 | |
| Metabolism | Metabolic Engineering of Klebsiella pneumoniae for the Production of 2-Butanone from Glucose. | Chen Z, Sun H, Huang J, Wu Y, Liu D. | PLoS One | 10.1371/journal.pone.0140508 | 2015 | |
| Probiotic Properties of Bifidobacterium longum KABP042 and Pediococcus pentosaceus KABP041 Show Potential to Counteract Functional Gastrointestinal Disorders in an Observational Pilot Trial in Infants. | Asto E, Huedo P, Altadill T, Aguilo Garcia M, Sticco M, Perez M, Espadaler-Mazo J. | Front Microbiol | 10.3389/fmicb.2021.741391 | 2021 | ||
| Phylogeny | Identification of novel Salmonella enterica serovar Typhimurium DT104-specific prophage and nonprophage chromosomal sequences among serovar Typhimurium isolates by genomic subtractive hybridization. | Hermans AP, Abee T, Zwietering MH, Aarts HJ. | Appl Environ Microbiol | 10.1128/aem.71.9.4979-4985.2005 | 2005 | |
| Characterization of structural and immunological properties of a fusion protein between flagellin from Salmonella and lumazine synthase from Brucella. | Hiriart Y, Rossi AH, Biedma ME, Errea AJ, Moreno G, Cayet D, Rinaldi J, Blanca B, Sirard JC, Goldbaum F, Berguer P, Rumbo M. | Protein Sci | 10.1002/pro.3151 | 2017 | ||
| Metabolism | Temporal Regulation of a Salmonella Typhimurium Virulence Factor by the Transcriptional Regulator YdcR. | Liu Y, Liu Q, Qi L, Ding T, Wang Z, Fu J, Hu M, Li M, Song J, Liu X. | Mol Cell Proteomics | 10.1074/mcp.m117.068296 | 2017 | |
| Antibacterial and Antibiofilm Activity of Selected Medicinal Plant Leaf Extracts Against Pathogens Implicated in Poultry Diseases. | Olawuwo OS, Famuyide IM, McGaw LJ. | Front Vet Sci | 10.3389/fvets.2022.820304 | 2022 | ||
| Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. | Chooneea D, Karlsson R, Encheva V, Arnold C, Appleton H, Shah H. | BMC Microbiol | 10.1186/1471-2180-10-44 | 2010 | ||
| Pathogenicity | Discovery and Characterization of a Nitroreductase Capable of Conferring Bacterial Resistance to Chloramphenicol. | Crofts TS, Sontha P, King AO, Wang B, Biddy BA, Zanolli N, Gaumnitz J, Dantas G. | Cell Chem Biol | 10.1016/j.chembiol.2019.01.007 | 2019 | |
| Phylogeny | Enteric salmonellosis disrupts the microbial ecology of the murine gastrointestinal tract. | Barman M, Unold D, Shifley K, Amir E, Hung K, Bos N, Salzman N. | Infect Immun | 10.1128/iai.01432-07 | 2008 | |
| Synthesis and biological evaluation of the progenitor of a new class of cephalosporin analogues, with a particular focus on structure-based computational analysis. | Verdino A, Vigliotta G, Giordano D, Caputo I, Soriente A, De Rosa M, Marabotti A. | PLoS One | 10.1371/journal.pone.0181563 | 2017 | ||
| The Herbal Compound Thymol Targets Multiple Salmonella Typhimurium Virulence Factors for Lon Protease Degradation. | Zhang Y, Liu Y, Luo J, Jie J, Deng X, Song L. | Front Pharmacol | 10.3389/fphar.2021.674955 | 2021 | ||
| Metabolism | Salmonella enterica serovar Typhimurium BipA exhibits two distinct ribosome binding modes. | deLivron MA, Robinson VL. | J Bacteriol | 10.1128/jb.00763-08 | 2008 | |
| Metabolism | A chemical biology approach to interrogate quorum-sensing regulated behaviors at the molecular and cellular level. | Lowery CA, Matamouros S, Niessen S, Zhu J, Scolnick J, Lively JM, Cravatt BF, Miller SI, Kaufmann GF, Janda KD. | Chem Biol | 10.1016/j.chembiol.2013.05.009 | 2013 | |
| Metabolism | The Unusual Resistance of Avian Defensin AvBD7 to Proteolytic Enzymes Preserves Its Antibacterial Activity. | Bailleul G, Kravtzoff A, Joulin-Giet A, Lecaille F, Labas V, Meudal H, Loth K, Teixeira-Gomes AP, Gilbert FB, Coquet L, Jouenne T, Bromme D, Schouler C, Landon C, Lalmanach G, Lalmanach AC. | PLoS One | 10.1371/journal.pone.0161573 | 2016 | |
| Pathogenicity | Prolonged impact of antibiotics on intestinal microbial ecology and susceptibility to enteric Salmonella infection. | Croswell A, Amir E, Teggatz P, Barman M, Salzman NH. | Infect Immun | 10.1128/iai.00006-09 | 2009 | |
| ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range. | Gonzalez-Montes L, Del Campo I, Garcillan-Barcia MP, de la Cruz F, Moncalian G. | PLoS Genet | 10.1371/journal.pgen.1008750 | 2020 | ||
| Pathogenicity | Contribution of flagellin pattern recognition to intestinal inflammation during Salmonella enterica serotype typhimurium infection. | Winter SE, Thiennimitr P, Nuccio SP, Haneda T, Winter MG, Wilson RP, Russell JM, Henry T, Tran QT, Lawhon SD, Gomez G, Bevins CL, Russmann H, Monack DM, Adams LG, Baumler AJ. | Infect Immun | 10.1128/iai.01341-08 | 2009 | |
| Phylogeny | DNA microarray-based typing of an atypical monophasic Salmonella enterica serovar. | Garaizar J, Porwollik S, Echeita A, Rementeria A, Herrera S, Wong RM, Frye J, Usera MA, McClelland M. | J Clin Microbiol | 10.1128/jcm.40.6.2074-2078.2002 | 2002 | |
| Metabolism | Complete proteome of a quinolone-resistant Salmonella Typhimurium phage type DT104B clinical strain. | Correia S, Nunes-Miranda JD, Pinto L, Santos HM, de Toro M, Saenz Y, Torres C, Capelo JL, Poeta P, Igrejas G. | Int J Mol Sci | 10.3390/ijms150814191 | 2014 | |
| Enzymology | Klebsiella phages representing a novel clade of viruses with an unknown DNA modification and biotechnologically interesting enzymes. | Maciejewska B, Roszniowski B, Espaillat A, Kesik-Szeloch A, Majkowska-Skrobek G, Kropinski AM, Briers Y, Cava F, Lavigne R, Drulis-Kawa Z. | Appl Microbiol Biotechnol | 10.1007/s00253-016-7928-3 | 2017 | |
| Metabolism | Application of isothermal helicase-dependent amplification with a disposable detection device in a simple sensitive stool test for toxigenic Clostridium difficile. | Chow WH, McCloskey C, Tong Y, Hu L, You Q, Kelly CP, Kong H, Tang YW, Tang W. | J Mol Diagn | 10.2353/jmoldx.2008.080008 | 2008 | |
| Enzymology | Quenched autoligation probes allow discrimination of live bacterial species by single nucleotide differences in rRNA. | Silverman AP, Kool ET. | Nucleic Acids Res | 10.1093/nar/gki814 | 2005 | |
| Metabolism | RosE represses Std fimbrial expression in Salmonella enterica serotype Typhimurium. | Chessa D, Winter MG, Nuccio SP, Tukel C, Baumler AJ. | Mol Microbiol | 10.1111/j.1365-2958.2008.06185.x | 2008 | |
| Novel Penicillin-Type Analogues Bearing a Variable Substituted 2-Azetidinone Ring at Position 6: Synthesis and Biological Evaluation. | De Rosa M, Vigliotta G, Palma G, Saturnino C, Soriente A. | Molecules | 10.3390/molecules201219828 | 2015 | ||
| Metabolism | Salmonella typhimurium intercepts Escherichia coli signaling to enhance antibiotic tolerance. | Vega NM, Allison KR, Samuels AN, Klempner MS, Collins JJ. | Proc Natl Acad Sci U S A | 10.1073/pnas.1308085110 | 2013 | |
| Phylogeny | Host restriction of Salmonella enterica serotype Typhimurium pigeon isolates does not correlate with loss of discrete genes. | Andrews-Polymenis HL, Rabsch W, Porwollik S, McClelland M, Rosetti C, Adams LG, Baumler AJ. | J Bacteriol | 10.1128/jb.186.9.2619-2628.2004 | 2004 | |
| A screen for and validation of prodrug antimicrobials. | Fleck LE, North EJ, Lee RE, Mulcahy LR, Casadei G, Lewis K. | Antimicrob Agents Chemother | 10.1128/aac.02136-13 | 2014 | ||
| Pathogenicity | Structure-activity relationship of cinnamaldehyde analogs as inhibitors of AI-2 based quorum sensing and their effect on virulence of Vibrio spp. | Brackman G, Celen S, Hillaert U, Van Calenbergh S, Cos P, Maes L, Nelis HJ, Coenye T. | PLoS One | 10.1371/journal.pone.0016084 | 2011 | |
| Role of meprins to protect ileal mucosa of Crohn's disease patients from colonization by adherent-invasive E. coli. | Vazeille E, Bringer MA, Gardarin A, Chambon C, Becker-Pauly C, Pender SL, Jakob C, Muller S, Lottaz D, Darfeuille-Michaud A. | PLoS One | 10.1371/journal.pone.0021199 | 2011 | ||
| Comparison of DeltarelA strains of Escherichia coli and Salmonella enterica serovar Typhimurium suggests a role for ppGpp in attenuation regulation of branched-chain amino acid biosynthesis. | Tedin K, Norel F. | J Bacteriol | 10.1128/jb.183.21.6184-6196.2001 | 2001 | ||
| Evaluation of Methods for Inoculating Dry Powder Foods with Salmonella enterica, Enterococcus faecium, or Cronobacter sakazakii. | Wiertzema JR, Borchardt C, Beckstrom AK, Dev K, Chen P, Chen C, Vickers Z, Feirtag J, Lee L, Ruan R, Baumler DJ | J Food Prot | 10.4315/0362-028X.JFP-18-284 | 2019 | ||
| Pathogenicity | Quantification of Transfer of Salmonella from Citrus Fruits to Peel, Edible Portion, and Gloved Hands during Hand Peeling. | Jung J, Friedrich LM, Danyluk MD, Schaffner DW | J Food Prot | 10.4315/0362-028X.JFP-16-423 | 2017 |
| #7575 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18522 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #68368 | Automatically annotated from API 20E . |
| #124042 | Johannes Wittmann, Clara Rolland, Lorenz Reimer, Joaquim Sardà: PhageDive . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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