Salmonella enterica CIP 104220 is a facultative anaerobe, Gram-negative, motile bacterium of the family Enterobacteriaceae.
Gram-negative motile rod-shaped facultative anaerobe genome sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Enterobacteriaceae |
| Genus Salmonella |
| Species Salmonella enterica |
| Full scientific name Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987 |
| Synonyms (9) |
| @ref | Name | Growth | Composition | Medium link | |
|---|---|---|---|---|---|
| 42276 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 42276 | CIP Medium 72 | Medium recipe at CIP | |||
| 42276 | CIP Medium 3 | Medium recipe at CIP |
| 42276 | Oxygen tolerancefacultative anaerobe |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 96.691 |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 42276 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 42276 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 42276 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 42276 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 42276 | lysine decarboxylase | + | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 42276 | ornithine decarboxylase | + | 4.1.1.17 | |
| 42276 | oxidase | - | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 42276 | tryptophan deaminase | - | ||
| 42276 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 42276 | 2 | Risk group (French classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM48729v3 assembly for Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 | complete | 938142 | 97.35 | ||||
| 124043 | ATCC_10708__202309 assembly for Salmonella enterica ETS 34 | complete | 28901 | 96.75 | ||||
| 66792 | Salmonella enterica enterica sv. Choleraesuis ATCC 10708 | complete | 938142 | 94.84 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 86.12 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 83.70 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 96.69 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 54.52 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 100.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.07 | yes |
| 125438 | aerobic | aerobicⓘ | no | 76.17 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 89.15 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.00 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 76.03 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Synthesis of silver nanoparticles using a modified Tollens' method in conjunction with phytochemicals and assessment of their antimicrobial activity. | AbuDalo MA, Al-Mheidat IR, Al-Shurafat AW, Grinham C, Oyanedel-Craver V. | PeerJ | 10.7717/peerj.6413 | 2019 | ||
| In silico exploration of Serratia sp. BRL41 genome for detecting prodigiosin Biosynthetic Gene Cluster (BGC) and in vitro antimicrobial activity assessment of secreted prodigiosin. | Boby F, Bhuiyan MNH, Saha BK, Dey SS, Saha AK, Islam MJ, Bashera MA, Moulick SP, Jahan F, Zaman MAU, Chowdhury SF, Naser SR, Khan MS, Sarkar MMH. | PLoS One | 10.1371/journal.pone.0294054 | 2023 | ||
| A Newly Discovered Obolenskvirus Phage with Sustained Lytic Activity Against Multidrug-Resistant Acinetobacter baumannii. | Vera-Jauregui E, Avila-Novoa MG, Gonzalez-Torres B, Guerrero-Medina PJ, Chaidez C, Gonzalez-Lopez I, Gonzalez-Gomez JP, Gutierrez-Lomeli M. | Antibiotics (Basel) | 10.3390/antibiotics14100961 | 2025 | ||
| Genetics | Comparative Patho-Genomics of Salmonella enterica Serovar Enteritidis Reveal Potential Host-Specific Virulence Factors. | Moreau MR, Edison LK, Ivanov YV, Wijetunge DSS, Hewage EMKK, Linder JE, Kariyawasam S. | Pathogens | 10.3390/pathogens14020128 | 2025 | |
| Innovative Multiplex PCR Assay for Detection of tlh, trh, and tdh Genes in Vibrio parahaemolyticus with Reference to the U.S. FDA's Bacteriological Analytical Manual (BAM). | Park SB, Zhang Y. | Pathogens | 10.3390/pathogens13090774 | 2024 | ||
| Effectiveness Evaluation of a UV-C-Photoinactivator against Selected ESKAPE-E Pathogens. | Rangel K, Cabral FO, Lechuga GC, Villas-Boas MHS, Midlej V, De-Simone SG. | Int J Environ Res Public Health | 10.3390/ijerph192416559 | 2022 | ||
| Single- and Dual-Species Biofilm Formation by Shiga Toxin-Producing Escherichia coli and Salmonella, and Their Susceptibility to an Engineered Peptide WK2. | Ma Z, Tang X, Stanford K, Chen X, McAllister TA, Niu YD. | Microorganisms | 10.3390/microorganisms9122510 | 2021 | ||
| Molecular Epidemiology of Salmonella enterica in Poultry in South Africa Using the Farm-to-Fork Approach. | Ramtahal MA, Somboro AM, Amoako DG, Abia ALK, Perrett K, Bester LA, Essack SY. | Int J Microbiol | 10.1155/2022/5121273 | 2022 | ||
| Development of Multienzyme Isothermal Rapid Amplification (MIRA) Combined with Lateral-Flow Dipstick (LFD) Assay to Detect Species-Specific tlh and Pathogenic trh and tdh Genes of Vibrio parahaemolyticus. | Park SB, Zhang Y. | Pathogens | 10.3390/pathogens13010057 | 2024 | ||
| Vernonia polyanthes Less. (Asteraceae Bercht. & Presl), a Natural Source of Bioactive Compounds with Antibiotic Effect against Multidrug-Resistant Staphylococcus aureus. | Gitirana de Santana JD, Santos-Mayorga OA, Florencio JR, Oliveira MCC, Almeida LMS, Xavier JOL, Zimmermann-Franco DC, Macedo GC, Ferreira ALP, Sousa OV, da Silva Filho AA, Alves MS. | Antibiotics (Basel) | 10.3390/antibiotics12030622 | 2023 | ||
| Prevalence Estimation, Antimicrobial Susceptibility, and Serotyping of Salmonella enterica Recovered from New World Non-Human Primates (Platyrrhini), Feed, and Environmental Surfaces from Wildlife Centers in Costa Rica. | Rojas-Sanchez E, Jimenez-Soto M, Barquero-Calvo E, Duarte-Martinez F, Mollenkopf DF, Wittum TE, Munoz-Vargas L. | Antibiotics (Basel) | 10.3390/antibiotics12050844 | 2023 | ||
| Potent Activity of a High Concentration of Chemical Ozone against Antibiotic-Resistant Bacteria. | Rangel K, Cabral FO, Lechuga GC, Carvalho JPRS, Villas-Boas MHS, Midlej V, De-Simone SG. | Molecules | 10.3390/molecules27133998 | 2022 | ||
| Flavorubredoxin, a Candidate Trigger Related to Thrombotic Thrombocytopenic Purpura: Screening of the Complete Genome of a Salmonella enterica Serovar Typhimurium Isolate From an AIDS Case. | Wang Z, Xu H, Gu B, Jin Y, Wang T, Ma J, Lu Y, Yu X, Zheng B, Zhang Y. | Front Cell Infect Microbiol | 10.3389/fcimb.2022.864087 | 2022 | ||
| Genetics | Comparative Genomics of a Polyvalent Escherichia-Salmonella Phage fp01 and In Silico Analysis of Its Receptor Binding Protein and Conserved Enterobacteriaceae Phage Receptor. | Vasquez I, Retamales J, Parra B, Machimbirike V, Robeson J, Santander J. | Viruses | 10.3390/v15020379 | 2023 | |
| Multiplex PCR assay based on the citE2 gene and intergenic sequence for the rapid detection of Salmonella Pullorum in chickens. | Liu Z, Yu Y, Fotina T, Petrov R, Klishchova Z, Fotin A, Ma J. | Poult Sci | 10.1016/j.psj.2022.101981 | 2022 | ||
| Ozonized Sunflower Oil: Standardization and Mechanisms of the Antimicrobial Effect. | Vieira MH, Boreski D, Franzen Matte B, Arias JLO, Junior CM, Bauab TM, Gabriel SA, Chin CM. | Int J Mol Sci | 10.3390/ijms26189156 | 2025 | ||
| Targeted Killing of Staphylococcus aureus Using Specific Peptides Displayed on Yeast Vacuoles. | Lee J, Nguyen NT, Tran LM, Kim YH, Min J. | Microbiol Spectr | 10.1128/spectrum.00920-23 | 2023 | ||
| Two homologous Salmonella serogroup C1-specific genes are required for flagellar motility and cell invasion. | Zhou X, Liu B, Liu Y, Shi C, Fratamico PM, Zhang L, Wang D, Zhang J, Cui Y, Xu P, Shi X. | BMC Genomics | 10.1186/s12864-021-07759-z | 2021 | ||
| Purification, bioactivity and application of maltobionic acid in active films. | de Souza RC, da Silva LM, Buratti BA, Carra S, Flores M, Puton BM, Rigotti M, Salvador M, Malvessi E, Moreira FKV, Steffens C, Valduga E, Zeni J. | 3 Biotech | 10.1007/s13205-023-03879-3 | 2024 | ||
| Phenolics Profiling by HPLC-DAD-ESI/MSn of the Scientific Unknown Polygonum hydropiperoides Michx. and Its Antioxidant and Anti-Methicillin-Resistant Staphylococcus aureus Activities. | da Costa YFG, Llorent-Martinez EJ, Fernandes LS, de Freitas PHS, Scio E, de Sousa OV, Castilho PC, Alves MS. | Plants (Basel) | 10.3390/plants12081606 | 2023 | ||
| Mitigation Potential of Herbal Extracts and Constituent Bioactive Compounds on Salmonella in Meat-Type Poultry. | Orimaye OE, Ekunseitan DA, Omaliko PC, Fasina YO. | Animals (Basel) | 10.3390/ani14071087 | 2024 | ||
| Antimicrobial and anti-aflatoxigenic activities of nanoemulsions based on Achillea millefolium and Crocus sativus flower extracts as green promising agents for food preservatives. | Abu Safe FA, Badr AN, Shehata MG, El-Sayyad GS. | BMC Microbiol | 10.1186/s12866-023-03033-2 | 2023 | ||
| Genetics | Rapid Real-Time Polymerase Chain Reaction for Salmonella Serotyping Based on Novel Unique Gene Markers by Pangenome Analysis. | Yang SM, Kim E, Kim D, Kim HB, Baek J, Ko S, Kim D, Yoon H, Kim HY. | Front Microbiol | 10.3389/fmicb.2021.750379 | 2021 | |
| Antibacterial Potential and Phytochemical Composition in Subcritical Water Extraction of Lempoyang (Zingiber zerumbet). | Ahmad N', Nordin MFM, Mokhtar N, Liong TK, Wahab IMA, Yuzir MAM, Mohamad M. | Trop Life Sci Res | 10.21315/tlsr2025.36.1.9 | 2025 | ||
| Detrimental Effect of Ozone on Pathogenic Bacteria. | Rangel K, Cabral FO, Lechuga GC, Carvalho JPRS, Villas-Boas MHS, Midlej V, De-Simone SG. | Microorganisms | 10.3390/microorganisms10010040 | 2021 | ||
| Genetics | How low can you go? Short-read polishing of Oxford Nanopore bacterial genome assemblies. | Bouras G, Judd LM, Edwards RA, Vreugde S, Stinear TP, Wick RR. | Microb Genom | 10.1099/mgen.0.001254 | 2024 | |
| Impact of Microencapsulation on Ocimum gratissimum L. Essential Oil: Antimicrobial, Antioxidant Activities, and Chemical Composition. | Granados ADPF, Duarte MCT, Noguera NH, Lima DC, Rodrigues RAF. | Foods | 10.3390/foods13193122 | 2024 | ||
| Photodynamic Inactivation of Foodborne Bacteria: Screening of 32 Potential Photosensitizers. | Prasad A, Wynands E, Roche SM, Romo-Bernal C, Allan N, Olson M, Levengood S, Andersen R, Loebel N, Sabino CP, Ross JA. | Foods | 10.3390/foods13030453 | 2024 | ||
| Biotechnology | Sweet Basil (Ocimum basilicum L.)-A Review of Its Botany, Phytochemistry, Pharmacological Activities, and Biotechnological Development. | Azizah NS, Irawan B, Kusmoro J, Safriansyah W, Farabi K, Oktavia D, Doni F, Miranti M. | Plants (Basel) | 10.3390/plants12244148 | 2023 | |
| Identification and phase inversion of Salmonella flagellar antigens, using immuno-discs. | Fujihara M, Tamamura Y, Tabuchi H, Uegaki K. | J Vet Med Sci | 10.1292/jvms.17-0122 | 2018 | ||
| Enzymology | Development of a Flow Cytometry-Based Method for Rapid Detection of Escherichia coli and Shigella Spp. Using an Oligonucleotide Probe. | Xue Y, Wilkes JG, Moskal TJ, Williams AJ, Cooper WM, Nayak R, Rafii F, Buzatu DA. | PLoS One | 10.1371/journal.pone.0150038 | 2016 | |
| Occurrence of drug-resistant enteric bacteria and associated factors among food handlers of the Mass Catering Center: A laboratory-based cross-sectional study. | Yenew C, Andualem M, Tadele F, Mulatu S, Atikilt G, Gebeyehu AA. | Ital J Food Saf | 10.4081/ijfs.2022.10221 | 2022 | ||
| Flagellar Motility Is Critical for Salmonella enterica Serovar Typhimurium Biofilm Development. | Wang F, Deng L, Huang F, Wang Z, Lu Q, Xu C. | Front Microbiol | 10.3389/fmicb.2020.01695 | 2020 | ||
| Pathogenicity | Anti-Salmonella Activity and Peptidomic Profiling of Peptide Fractions Produced from Sturgeon Fish Skin Collagen (Huso huso) Using Commercial Enzymes. | Atef M, Chait YA, Ojagh SM, Latifi AM, Latifi AM, Esmaeili M, Hammami R, Udenigwe CC. | Nutrients | 10.3390/nu13082657 | 2021 | |
| Fluorinated Quaternary Chitosan Derivatives: Synthesis, Characterization, Antibacterial Activity, and Killing Kinetics. | Cele ZED, Somboro AM, Amoako DG, Ndlandla LF, Balogun MO. | ACS Omega | 10.1021/acsomega.0c01355 | 2020 | ||
| Genetics | Industrial Composting of Sewage Sludge: Study of the Bacteriome, Sanitation, and Antibiotic-Resistant Strains. | Lopez-Gonzalez JA, Estrella-Gonzalez MJ, Lerma-Moliz R, Jurado MM, Suarez-Estrella F, Lopez MJ. | Front Microbiol | 10.3389/fmicb.2021.784071 | 2021 | |
| Bioassay-Guided Phytochemical Analyses and Antimicrobial Potentials of the Leaf Extract of Clematis hirsuta Perr. and Guill. Against Some Pathogenic Bacteria and Fungi. | Ameya G, Manilal A, Sabu KR, Aragie S. | Infect Drug Resist | 10.2147/idr.s389699 | 2022 | ||
| Emerging Approaches for Mitigating Biofilm-Formation-Associated Infections in Farm, Wild, and Companion Animals. | Araujo D, Silva AR, Fernandes R, Serra P, Barros MM, Campos AM, Oliveira R, Silva S, Almeida C, Castro J. | Pathogens | 10.3390/pathogens13040320 | 2024 | ||
| Re-Emergence of Salmonellosis in Hog Farms: Outbreak and Bacteriological Characterization. | Meneguzzi M, Pissetti C, Rebelatto R, Trachsel J, Kuchiishi SS, Reis AT, Guedes RMC, Leao JA, Reichen C, Kich JD. | Microorganisms | 10.3390/microorganisms9050947 | 2021 | ||
| |Isolation and characterization of novel bacteriophages as a potential therapeutic option for Escherichia coli urinary tract infections. | Gonzalez-Villalobos E, Ribas-Aparicio RM, Montealegre GER, Belmont-Monroy L, Ortega-Garcia Y, Aparicio-Ozores G, Balcazar JL, Eslava-Campos CA, Hernandez-Chinas U, Molina-Lopez J. | Appl Microbiol Biotechnol | 10.1007/s00253-021-11432-6 | 2021 | ||
| Bioprospecting of desert actinobacteria with special emphases on griseoviridin, mitomycin C and a new bacterial metabolite producing Streptomyces sp. PU-KB10-4. | Saleem M, Hassan A, Li F, Lu Q, Ponomareva LV, Parkin S, Sun C, Thorson JS, Shaaban KA, Sajid I. | BMC Microbiol | 10.1186/s12866-023-02770-8 | 2023 | ||
| Application of a Phage Cocktail for Control of Salmonella in Foods and Reducing Biofilms. | Islam MS, Zhou Y, Liang L, Liang L, Nime I, Liu K, Yan T, Wang X, Li J. | Viruses | 10.3390/v11090841 | 2019 | ||
| Isolation, Characterization, and Application of Bacteriophage LPSE1 Against Salmonella enterica in Ready to Eat (RTE) Foods. | Huang C, Virk SM, Shi J, Zhou Y, Willias SP, Morsy MK, Abdelnabby HE, Liu J, Wang X, Li J. | Front Microbiol | 10.3389/fmicb.2018.01046 | 2018 | ||
| Enteric bacterial pathogens and their antibiotic-resistant patterns from the environmental sources in different regions of Ethiopia: A laboratory-based cross-sectional study. | Denku CY, Ambelu A, Mitike G. | Health Sci Rep | 10.1002/hsr2.521 | 2022 | ||
| Pathogenicity | The wide spectrum high biocidal potency of Bioxy formulation when dissolved in water at different concentrations. | Dagher D, Ungar K, Robison R, Dagher F. | PLoS One | 10.1371/journal.pone.0172224 | 2017 | |
| The Invasin and Complement-Resistance Protein Rck of Salmonella is More Widely Distributed than Previously Expected. | Koczerka M, Douarre PE, Kempf F, Holbert S, Mistou MY, Grepinet O, Virlogeux-Payant I. | Microbiol Spectr | 10.1128/spectrum.01457-21 | 2021 | ||
| Himalaquinones A-G, Angucyclinone-Derived Metabolites Produced by the Himalayan Isolate Streptomyces sp. PU-MM59. | Zhang Y, Cheema MT, Ponomareva LV, Ye Q, Liu T, Sajid I, Rohr J, She QB, Voss SR, Thorson JS, Shaaban KA. | J Nat Prod | 10.1021/acs.jnatprod.1c00192 | 2021 | ||
| Elicitation of Stress-Induced Phenolic Metabolites for Antimicrobial Applications against Foodborne Human Bacterial Pathogens. | Christopher A, Sarkar D, Shetty K. | Antibiotics (Basel) | 10.3390/antibiotics10020109 | 2021 | ||
| Development of molecular approach based on PCR assay for detection of histamine producing bacteria. | Wongsariya K, Bunyapraphatsara N, Yasawong M, Chomnawang MT. | J Food Sci Technol | 10.1007/s13197-015-1982-1 | 2016 | ||
| Pathogenicity | Qualitative and Quantitative Assays for Detection and Characterization of Protein Antimicrobials. | Farris MH, Ford KA, Doyle RC. | J Vis Exp | 10.3791/53819 | 2016 | |
| Spasmolytic and Antibacterial Activity of Two Citrus sinensis Osbeck Varieties Cultivated in Mexico. | Sanchez-Recillas A, Arroyo-Herrera AL, Araujo-Leon JA, Hernandez Nunez E, Ortiz Andrade R. | Evid Based Complement Alternat Med | 10.1155/2017/3960837 | 2017 | ||
| Bactericidal and fungicidal activities of novel ProtecTeaV formulations - alcohol-based hand hygiene and surface disinfectant prototypes containing epigallocatechin-3-gallate-palmitate (EC16). | Dickinson D, Tufo MD, Liu E, Shao X, Hsu S. | Microbiol Infect Dis | 10.33425/2639-9458.1135 | 2021 | ||
| Application of a Broad Range Lytic Phage LPST94 for Biological Control of Salmonella in Foods. | Islam MS, Zhou Y, Liang L, Nime I, Yan T, Willias SP, Mia MZ, Bei W, Connerton IF, Fischetti VA, Li J. | Microorganisms | 10.3390/microorganisms8020247 | 2020 | ||
| Peptide consensus sequence determination for the enhancement of the antimicrobial activity and selectivity of antimicrobial peptides. | Almaaytah A, Ajingi Y, Abualhaijaa A, Tarazi S, Alshar'i N, Al-Balas Q. | Infect Drug Resist | 10.2147/idr.s118877 | 2017 | ||
| Biosynthesis of Silver Nanoparticles Using Stenocereus queretaroensis Fruit Peel Extract: Study of Antimicrobial Activity. | Padilla-Camberos E, Sanchez-Hernandez IM, Torres-Gonzalez OR, Ramirez-Rodriguez P, Diaz E, Wille H, Flores-Fernandez JM. | Materials (Basel) | 10.3390/ma14164543 | 2021 | ||
| Metabolism | Structure Determination, Functional Characterization, and Biosynthetic Implications of Nybomycin Metabolites from a Mining Reclamation Site-Associated Streptomyces. | Wang X, Elshahawi SI, Ponomareva LV, Ye Q, Liu Y, Copley GC, Hower JC, Hatcher BE, Kharel MK, Van Lanen SG, She QB, Voss SR, Thorson JS, Shaaban KA. | J Nat Prod | 10.1021/acs.jnatprod.9b01015 | 2019 | |
| Metabolism | Puromycins B-E, Naturally Occurring Amino-Nucleosides Produced by the Himalayan Isolate Streptomyces sp. PU-14G. | Abbas M, Elshahawi SI, Wang X, Ponomareva LV, Sajid I, Shaaban KA, Thorson JS. | J Nat Prod | 10.1021/acs.jnatprod.8b00720 | 2018 | |
| Efficacy of disinfectant-impregnated wipes used for surface disinfection in hospitals: a review. | Song X, Vossebein L, Zille A. | Antimicrob Resist Infect Control | 10.1186/s13756-019-0595-2 | 2019 | ||
| Enzymology | Cytotoxic Indolocarbazoles from Actinomadura melliaura ATCC 39691. | Shaaban KA, Elshahawi SI, Wang X, Horn J, Kharel MK, Leggas M, Thorson JS. | J Nat Prod | 10.1021/acs.jnatprod.5b00429 | 2015 | |
| Enzymology | Mechanistic insights into synergy between nalidixic acid and tetracycline against clinical isolates of Acinetobacter baumannii and Escherichia coli. | Gaurav A, Gupta V, Shrivastava SK, Pathania R. | Commun Biol | 10.1038/s42003-021-02074-5 | 2021 | |
| Enzymology | Ruthmycin, a new tetracyclic polyketide from Streptomyces sp. RM-4-15. | Wang X, Elshahawi SI, Shaaban KA, Fang L, Ponomareva LV, Zhang Y, Copley GC, Hower JC, Zhan CG, Kharel MK, Thorson JS. | Org Lett | 10.1021/ol4033418 | 2014 | |
| Bacteriophages as Potential Tools for Detection and Control of Salmonella spp. in Food Systems. | Wei S, Chelliah R, Rubab M, Oh DH, Uddin MJ, Ahn J. | Microorganisms | 10.3390/microorganisms7110570 | 2019 | ||
| Biotechnology | Validation of the One Broth One Plate for Salmonella Method for Detection of Salmonella Spp. in Select Food and Environmental Samples: AOAC Performance Tested MethodSM 102002. | Alles S, Roman B, Le QN, Kurteu M, Elmerhebi E, Potter C, Mozola M, Thompson W, Bastin B, Donofrio R. | J AOAC Int | 10.1093/jaoacint/qsaa149 | 2021 | |
| Characterization of Salmonella Phage LPST153 That Effectively Targets Most Prevalent Salmonella Serovars. | Islam MS, Hu Y, Mizan MFR, Yan T, Nime I, Zhou Y, Li J. | Microorganisms | 10.3390/microorganisms8071089 | 2020 | ||
| Metabolism | Baraphenazines A-G, Divergent Fused Phenazine-Based Metabolites from a Himalayan Streptomyces. | Wang X, Abbas M, Zhang Y, Elshahawi SI, Ponomareva LV, Cui Z, Van Lanen SG, Sajid I, Voss SR, Shaaban KA, Thorson JS. | J Nat Prod | 10.1021/acs.jnatprod.9b00289 | 2019 | |
| JcTI-I: a novel trypsin inhibitor from Jatropha curcas seed cake with potential for bacterial infection treatment. | Costa HP, Oliveira JT, Sousa DO, Morais JK, Moreno FB, Monteiro-Moreira AC, Viegas RA, Vasconcelos IM. | Front Microbiol | 10.3389/fmicb.2014.00005 | 2014 | ||
| Phylogeny | Mullinamides A and B, new cyclopeptides produced by the Ruth Mullins coal mine fire isolate Streptomyces sp. RM-27-46. | Wang X, Shaaban KA, Elshahawi SI, Ponomareva LV, Sunkara M, Copley GC, Hower JC, Morris AJ, Kharel MK, Thorson JS. | J Antibiot (Tokyo) | 10.1038/ja.2014.37 | 2014 | |
| Chemical Analysis and Evaluation of Antioxidant, Antimicrobial, and Photoprotective Activities of Schinopsis brasiliensis Engl. (Anacardiaceae). | de Lima-Saraiva SRG, Oliveira FGDS, Oliveira FGDS, Junior RGO, Araujo CS, de Oliveira AP, Pacheco AGM, Rolim LA, de Amorim ELC, Cesar FCS, Almeida JRGDS. | ScientificWorldJournal | 10.1155/2017/1713921 | 2017 | ||
| Evaluation of JC9450 and Neutral Electrolyzed Water in Controlling Listeria monocytogenes on Fresh Apples and Preventing Cross-Contamination. | Sheng L, Shen X, Ulloa O, Suslow TV, Hanrahan I, Zhu MJ. | Front Microbiol | 10.3389/fmicb.2019.03128 | 2019 | ||
| Strategy for Accurate Detection of Escherichia Coli O157:H7 in Ground Pork Using a Lateral Flow Immunoassay. | Cheng S, Chen MH, Zhang GG, Yu ZB, Liu DF, Xiong YH, Wei H, Lai WH. | Sensors (Basel) | 10.3390/s17040753 | 2017 | ||
| Enzymology | Identification of Neuroprotective Spoxazomicin and Oxachelin Glycosides via Chemoenzymatic Glycosyl-Scanning. | Zhang J, Hughes RR, Saunders MA, Elshahawi SI, Ponomareva LV, Zhang Y, Winchester SR, Scott SA, Sunkara M, Morris AJ, Prendergast MA, Shaaban KA, Thorson JS. | J Nat Prod | 10.1021/acs.jnatprod.6b00949 | 2017 | |
| Pathogenicity | Broad-host-range Salmonella bacteriophage STP4-a and its potential application evaluation in poultry industry. | Li M, Lin H, Jing Y, Wang J. | Poult Sci | 10.1016/j.psj.2020.03.051 | 2020 | |
| Phylogeny | Phylogenetic diversity of the enteric pathogen Salmonella enterica subsp. enterica inferred from genome-wide reference-free SNP characters. | Timme RE, Pettengill JB, Allard MW, Strain E, Barrangou R, Wehnes C, Van Kessel JS, Karns JS, Musser SM, Brown EW. | Genome Biol Evol | 10.1093/gbe/evt159 | 2013 | |
| Phytochemical Screening of Quaking Aspen (Populus tremuloides) Extracts by UPLC-QTOF-MS and Evaluation of their Antimicrobial Activity. | St-Pierre A, Blondeau D, Lajeunesse A, Bley J, Bourdeau N, Desgagne-Penix I. | Molecules | 10.3390/molecules23071739 | 2018 | ||
| Functional Carboxymethylcellulose/Zein Bionanocomposite Films Based on Neomycin Supported on Sepiolite or Montmorillonite Clays. | Rebitski EP, Alcantara ACS, Darder M, Cansian RL, Gomez-Hortiguela L, Pergher SBC. | ACS Omega | 10.1021/acsomega.8b01026 | 2018 | ||
| Pathogenicity | Copper and quaternary ammonium cations exert synergistic bactericidal and antibiofilm activity against Pseudomonas aeruginosa. | Harrison JJ, Turner RJ, Joo DA, Stan MA, Chan CS, Allan ND, Vrionis HA, Olson ME, Ceri H. | Antimicrob Agents Chemother | 10.1128/aac.00203-08 | 2008 | |
| Water-based binary polyol process for the controllable synthesis of silver nanoparticles inhibiting human and foodborne pathogenic bacteria. | Nam S, Park B, Condon BD. | RSC Adv | 10.1039/c8ra01823e | 2018 | ||
| Enhanced Antimicrobial Activity of AamAP1-Lysine, a Novel Synthetic Peptide Analog Derived from the Scorpion Venom Peptide AamAP1. | Almaaytah A, Tarazi S, Abu-Alhaijaa A, Altall Y, Alshar'i N, Bodoor K, Al-Balas Q. | Pharmaceuticals (Basel) | 10.3390/ph7050502 | 2014 | ||
| Pathogenicity | The outer membrane of gram-negative bacteria inhibits antibacterial activity of brochocin-C. | Gao Y, van Belkum MJ, Stiles ME. | Appl Environ Microbiol | 10.1128/aem.65.10.4329-4333.1999 | 1999 | |
| Enzymology | Spoxazomicin D and Oxachelin C, Potent Neuroprotective Carboxamides from the Appalachian Coal Fire-Associated Isolate Streptomyces sp. RM-14-6. | Shaaban KA, Saunders MA, Zhang Y, Tran T, Elshahawi SI, Ponomareva LV, Wang X, Zhang J, Copley GC, Sunkara M, Kharel MK, Morris AJ, Hower JC, Tremblay MS, Prendergast MA, Thorson JS. | J Nat Prod | 10.1021/acs.jnatprod.6b00948 | 2017 | |
| Anti-Planktonic and Anti-Biofilm Properties of Pentacyclic Triterpenes-Asiatic Acid and Ursolic Acid as Promising Antibacterial Future Pharmaceuticals. | Sycz Z, Tichaczek-Goska D, Wojnicz D. | Biomolecules | 10.3390/biom12010098 | 2022 | ||
| Enzymology | Mitrecin A, an endolysin-like bacteriolytic enzyme from a newly isolated soil streptomycete. | Farris MH, Steinberg AD. | Lett Appl Microbiol | 10.1111/lam.12220 | 2014 | |
| Dielectric Barrier Discharge for Solid Food Applications. | Figueroa-Pinochet MF, Castro-Alija MJ, Tiwari BK, Jimenez JM, Lopez-Vallecillo M, Cao MJ, Albertos I. | Nutrients | 10.3390/nu14214653 | 2022 | ||
| Antimicrobial Activity and Chemical Composition of Essential Oils from Verbenaceae Species Growing in South America. | Perez Zamora CM, Torres CA, Nunez MB. | Molecules | 10.3390/molecules23030544 | 2018 | ||
| Pathogenicity | Antimicrobial activity and chemical composition of white birch (Betula papyrifera Marshall) bark extracts. | Blondeau D, St-Pierre A, Bourdeau N, Bley J, Lajeunesse A, Desgagne-Penix I. | Microbiologyopen | 10.1002/mbo3.944 | 2020 | |
| Enzymology | Bi- and Tetracyclic Spirotetronates from the Coal Mine Fire Isolate Streptomyces sp. LC-6-2. | Wang X, Elshahawi SI, Cai W, Zhang Y, Ponomareva LV, Chen X, Copley GC, Hower JC, Zhan CG, Parkin S, Rohr J, Van Lanen SG, Shaaban KA, Thorson JS. | J Nat Prod | 10.1021/acs.jnatprod.7b00108 | 2017 | |
| Antibacterial and Cytotoxic Actinomycins Y6-Y9 and Zp from Streptomyces sp. Strain Gö-GS12. | Cai W, Wang X, Elshahawi SI, Ponomareva LV, Liu X, McErlean MR, Cui Z, Arlinghaus AL, Thorson JS, Van Lanen SG. | J Nat Prod | 10.1021/acs.jnatprod.6b00742 | 2016 | ||
| Pathogenicity | Tridecaptin M, a New Variant Discovered in Mud Bacterium, Shows Activity against Colistin- and Extremely Drug-Resistant Enterobacteriaceae. | Jangra M, Kaur M, Tambat R, Rana R, Maurya SK, Khatri N, Ghafur A, Nandanwar H. | Antimicrob Agents Chemother | 10.1128/aac.00338-19 | 2019 | |
| Transcriptome | Mutation of a Salmonella serogroup-C1-specific gene abrogates O7-antigen biosynthesis and triggers NaCl-dependent motility deficiency. | Zhou X, Liu B, Shi C, Shi X. | PLoS One | 10.1371/journal.pone.0106708 | 2014 | |
| Pathogenicity | A Review on Flavonoid Apigenin: Dietary Intake, ADME, Antimicrobial Effects, and Interactions with Human Gut Microbiota. | Wang M, Firrman J, Liu L, Yam K. | Biomed Res Int | 10.1155/2019/7010467 | 2019 | |
| Characterization of a plasmid dependent DNA phage targeting Escherichia coli harboring a conjugative plasmid and its impact on gut microbiota | Jung G, Zin H, Son B, Shin H, Kim J. | Sci Rep | 2025 | |||
| Adaptation and validation of a method for evaluating the bactericidal activity of ethyl alcohol in gel format 70% (w/w). | Cruz AFD, Abreu AO, Souza PA, Deveza B, Medeiros CT, Sousa VS, Sabagh BP, Villas Boas MHS | J Microbiol Methods | 10.1016/j.mimet.2021.106402 | 2021 | ||
| Phylogeny | Dual Inhibition of Salmonella enterica and Clostridium perfringens by New Probiotic Candidates Isolated from Chicken Intestinal Mucosa. | Lone A, Mottawea W, Ait Chait Y, Hammami R | Microorganisms | 10.3390/microorganisms9010166 | 2021 | |
| Pathogenicity | Down-top nanofabrication of binary (CdO)x (ZnO)1-x nanoparticles and their antibacterial activity. | Al-Hada NM, Mohamed Kamari H, Abdullah CAC, Saion E, Shaari AH, Talib ZA, Matori KA | Int J Nanomedicine | 10.2147/IJN.S150405 | 2017 | |
| Complete Genome and Methylome Sequences of Two Salmonella enterica spp. | Yao K, Muruvanda T, Roberts RJ, Payne J, Allard MW, Hoffmann M | Genome Announc | 10.1128/genomeA.01599-15 | 2016 | ||
| Phylogeny | Evaluation of the antibacterial activity of the methylene chloride extract of Miconia ligustroides, isolated triterpene acids, and ursolic acid derivatives. | Cunha WR, de Matos GX, Souza MG, Tozatti MG, Andrade e Silva ML, Martins CH, da Silva R, Da Silva Filho AA | Pharm Biol | 10.3109/13880200903062648 | 2010 | |
| Pathogenicity | Antimicrobial activity and chemical investigation of Brazilian Drosera. | Ferreira DT, Andrei CC, Saridakis HO, Faria Tde J, Vinhato E, Carvalho KE, Daniel JF, Machado SL, Saridakis DP, Braz-Filho R | Mem Inst Oswaldo Cruz | 10.1590/s0074-02762004000700016 | 2005 | |
| Pathogenicity | Evaluation of disinfectants against Salmonella enteritidis. | Davison S, Benson CE, Eckroade RJ | Avian Dis | 1996 | ||
| Pathogenicity | [Microbiological evaluation of chemical disinfectants for household use]. | Timenetsky J | Rev Saude Publica | 10.1590/s0034-89101990000100008 | 1990 | |
| Pathogenicity | [Phenolic coefficient in the microbiological evaluation of disinfectants for hospital and household use]. | Timenetsky J, Alterthum F | Rev Saude Publica | 10.1590/s0034-89101989000200011 | 1989 | |
| Pathogenicity | Ineffectiveness of hospital disinfectants against bacteria: a collaborative study. | Rutala WA, Cole EC | Infect Control | 10.1017/s0195941700067564 | 1987 | |
| Cultivation | Standardization of bacterial numbers of penicylinders used in disinfectant testing: interlaboratory study. | Cole EC, Rutala WA, Samsa GP | J Assoc Off Anal Chem | 1987 | ||
| Atmospheric Cold Plasma Inactivation of Salmonella and Escherichia coli on the Surface of Golden Delicious Apples. | Kilonzo-Nthenge A, Liu S, Yannam S, Patras A | Front Nutr | 10.3389/fnut.2018.00120 | 2018 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #42276 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104220 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68382 | Automatically annotated from API zym . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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