Name: Salmonella enterica 1348
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5116

Type strain:

Species: Salmonella enterica

Strain Designation: 1348

Culture col. no.: DSM 14846, ATCC 13312, CIP 55.133, CIP 58.57, NCTC 5735, JCM 1651, CECT 915, NBRC 105684, CCUG 49677

Strain history: CIP <- 1955, L. Le Minor, Inst. Pasteur, Paris, France, Salmonella choleraesuis <- F. Kaufmann, Copenhagen, Denmark: strain 1348

NCBI tax ID(s): 59201 (subspecies)

SI-ID 35787

ATCC 13312, NCTC 5735, JCM 1651, CIP 55.133, CIP 58.57, CECT 915, CCRC 10743, DSM 14846, KCTC 2929, BCRC 10743, CCT 0524, CCUG 49677, KCTC 12455

Other strains from Salmonella enterica

Section

Salmonella enterica 1348 is a facultative anaerobe, mesophilic, motile bacterium that was isolated from Unknown source.

motile
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Enterobacteriaceae*
	Genus	*Salmonella*
	Species	**Salmonella enterica**
	Full Scientific Name (LPSN)	Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

	Synonym	"Bacillus* typhi"*
	Synonym	"Bacillus* typhimurium"*
	Synonym	"Bacillus* enteritidis"*
	Synonym	"Bacillus* choleraesuis"*
	Synonym	Salmonella typhi
	Synonym	Salmonella choleraesuis
	Synonym	Salmonella paratyphi
	Synonym	Salmonella typhimurium
	Synonym	Salmonella enteritidis

Information on morphological and physiological properties Morphology

[Ref.: #119050]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.99

[Ref.: #119050]	Cell shape	rod-shaped

[Ref.: #119050]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %94.875

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5574]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #5574]

Culture medium growth

[Ref.: #5574]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5574]

Culture medium composition

expand / minimize

[Ref.: #34999]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #34999]

Culture medium growth

[Ref.: #34999]

Culture medium composition

expand / minimize

[Ref.: #119050]

Culture medium

CIP Medium 72

[Ref.: #119050]

Culture medium growth

[Ref.: #119050]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #119050]

Culture medium

CIP Medium 3

[Ref.: #119050]

Culture medium growth

[Ref.: #119050]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5574]		growth	30 °C
[Ref.: #34999]		growth	30 °C
[Ref.: #67770]		growth	37 °C
[Ref.: #119050]		growth	10-41 °C
[Ref.: #119050]	no	growth	5 °C

[Ref.: #5574]	Temperature range	mesophilic
[Ref.: #34999]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #119050]	Temperature range	psychrophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #119050]

Oxygen tolerance

facultative anaerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.792

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #119050]	citrate ChEBI	+	carbon source
[Ref.: #119050]	malonate ChEBI	-	assimilation
[Ref.: #119050]	nitrate ChEBI	+	reduction
[Ref.: #119050]	nitrite ChEBI	-	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #119050]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite production	Metabolite	Production
[Ref.: #119050]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #119050]		acetoin ChEBI	-
[Ref.: #119050]		glucose ChEBI		+

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #119050]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #119050]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #119050]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #119050]	lysine decarboxylase	+	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #119050]	ornithine decarboxylase	+	4.1.1.17
[Ref.: #119050]	oxidase	-
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #119050]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #119050]	12821	-	+	+	+	-	+	+	-	+	-	+	+	+	-	-	-	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #119050]	Sample type/isolated from	Unknown source
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB626116 (>99% sequence identity) for Salmonella enterica from Microbeatlas

Aquatic Samples	2005
Soil Samples	1084
Animal Samples	23018
Plant Samples	1996
Total Samples	28103

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5574]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #119050]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Salmonella enterica subsp. enterica gene for 16S rRNA, partial sequence, strain: JCM 1651	AB626116	1464	ENA	59201 tax ID
[Ref.: #20218]	Salmonella choleraesuis strain DSM 14846 16S ribosomal RNA gene, partial sequence	EU014681	1413	ENA	28901 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Salmonella enterica DSM 14846	GCA_003201315	scaffold	GenBank	28901 tax ID
[Ref.: #66792]	Salmonella enterica subsp. enterica serovar Choleraesuis NCTC5735	GCA_900456705	contig	GenBank	119912 tax ID	*
[Ref.: #66792]	Salmonella enterica strain DSM 14846	28901.4074	wgs	PATRIC	28901 tax ID	*
[Ref.: #66792]	Salmonella enterica strain FDAARGOS_879	28901.13771	complete	PATRIC	28901 tax ID	*
[Ref.: #66792]	Salmonella enterica subsp. enterica serovar Choleraesuis strain NCTC5735	119912.46	wgs	PATRIC	119912 tax ID	*
[Ref.: #66792]	Salmonella choleraesuis DSM 14846	2756170275	draft	JGI IMG/M	28901 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Salmonella enterica strain FDAARGOS_879 strain Not applicable PATRIC: 28901.13771
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Salmonella enterica strain FDAARGOS_879 strain Not applicable PATRIC: 28901.13771
[Ref.: #69480]	gram-positive	no	98.715	no
[Ref.: #69480]	anaerobic	no	91.86	no
[Ref.: #69480]	halophile	no	93.516	no
[Ref.: #69480]	spore-forming	no	93.965	no
[Ref.: #69480]	glucose-util	yes	92.522	no
[Ref.: #69480]	motile	yes	90.897	no
[Ref.: #69480]	aerobic	yes	68.216	no
[Ref.: #69480]	thermophile	no	98.527	yes
[Ref.: #69480]	flagellated	no	51.833	no
[Ref.: #69480]	glucose-ferment	yes	93.193	no

Availability in culture collections External links

[Ref.: #5574]

Culture collection no.

DSM 14846, ATCC 13312, CIP 55.133, CIP 58.57, NCTC 5735, JCM 1651, CECT 915, NBRC 105684, CCUG 49677

[Ref.: #74609]

SI-ID 35787

Literature:

	Title	Authors	Journal	DOI	Year
Pathogenicity	Enhanced bactericidal effect of enterocin AS-48 in combination with high-intensity pulsed-electric field treatment against Salmonella enterica in apple juice.	Martinez Viedma P, Sobrino Lopez A, Ben Omar N, Abriouel H, Lucas Lopez R, Valdivia E, Martin Belloso O, Galvez A	Int J Food Microbiol	10.1016/j.ijfoodmicro.2008.08.014	2008	*
	Inhibition of Salmonella enterica Cells in Deli-Type Salad by Enterocin AS-48 in Combination with Other Antimicrobials.	Cobo Molinos A, Lucas Lopez R, Abriouel H, Ben Omar N, Valdivia E, Galvez A	Probiotics Antimicrob Proteins	10.1007/s12602-009-9005-z	2009	*

References

#5574

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14846

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#34999 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#74609

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID35787.1 )

#119050 Collection of Institut Pasteur ; Curators of the CIP; CIP 55.133
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Salmonella enterica subsp. enterica in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Salmonella enterica strain FDAARGOS_879 strain Not applicable

Salmonella enterica strain FDAARGOS_879 strain Not applicable

Change proposal

Change proposal