Salmonella enterica subsp. enterica (JCM 6980, IFO 14210, NBRC 14210)

Name: Salmonella enterica subsp. enterica (JCM 6980, IFO 14210, NBRC 14210)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 165442

Type strain

Culture col. no. JCM 6980 IFO 14210 NBRC 14210

NCBI tax ID(s) 59201

Special Collections JCM

History JCM <-- IFO 14210 <-- RTCI <-- Natl. Cancer Center, Res. Inst., Japan <-- Univ. California (B. N. Ames TA 1536).

Links

Salmonella enterica subsp. enterica JCM 6980 is a bacterium of the family Enterobacteriaceae.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 62770

JCM 6980,IFO 14210,NBRC 14210

@ref 20215

Last LPSN update 2026-05-29 08:45:39

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Salmonella

Species Salmonella enterica subsp. enterica

Full scientific name Salmonella enterica subsp. enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

Synonyms (1)

Salmonella choleraesuis subsp. choleraesuis

BacDive ID	Other strains from **Salmonella enterica subsp. enterica** (55)	Type strain
5117	S. enterica subsp. enterica LT2, DSM 17058, ATCC 43971, CIP 60.62, NCIMB ... (type strain)
5103	S. enterica subsp. enterica LT2 hisG46, DSM 554
5104	S. enterica subsp. enterica K 103, DSM 4224, CIP 80.39, NCTC 6017, WDCM ...
5105	S. enterica subsp. enterica DSM 4883, ATCC 9184
5106	S. enterica subsp. enterica F98, DSM 26529, CECT 4156, CIP 110278, NCTC ...
5107	S. enterica subsp. enterica Mutton, DSM 5569, ATCC 13311, CCM 7933, NCTC ...
5108	S. enterica subsp. enterica Hochberg 2460, DSM 9145, ATCC 7378
5109	S. enterica subsp. enterica pSK1002, TA 1535/pSK 1002, DSM 9274
5110	S. enterica subsp. enterica 16, DSM 9379, ATCC 8326
5111	S. enterica subsp. enterica 775/W, Col Sal 385/57, 493, W 775, 775W, ...
5113	S. enterica subsp. enterica Zoosaloral H, DSM 11320
5114	S. enterica subsp. enterica DSM 13674, RKI 00-07121
5115	S. enterica subsp. enterica DSM 14221, RKI 01-02637
5116	S. enterica subsp. enterica 1348, DSM 14846, ATCC 13312, CIP 55.133, ...
5118	S. enterica subsp. enterica K-1891, DSM 17420, ATCC 13076, DSM 9898, ...
5120	S. enterica subsp. enterica DSM 19587, ATCC 14028, CDC 6516-60, CIP 104115, ...
5121	S. enterica subsp. enterica SL1344, DSM 24522
5122	S. enterica subsp. enterica Menendez 245, DSM 26655, ATCC 49214, CECT ...
23943	S. enterica subsp. enterica 110 (K 108), CNCT SK 108, GISK 100331, 110, ...
23944	S. enterica subsp. enterica Vi4, DSM 50912, ICPB 3247
23945	S. enterica subsp. enterica GISK 100354, StBL 4519, DSM 27686, CECT 4154, ...
131928	S. enterica subsp. enterica S15, DSM 101475
131929	S. enterica subsp. enterica S23, DSM 101476
131930	S. enterica subsp. enterica DSM 102345, NCCP 12232
131931	S. enterica subsp. enterica DSM 102851, NCCP 12241
131932	S. enterica subsp. enterica DSM 102864, NCCP 12231
157848	S. enterica subsp. enterica strain 6, DSM 107291
157849	S. enterica subsp. enterica strain 45, DSM 107292
157850	S. enterica subsp. enterica strain 104, DSM 107293
157851	S. enterica subsp. enterica strain 117, DSM 107294
157852	S. enterica subsp. enterica strain 191, DSM 107295
157853	S. enterica subsp. enterica strain 232, DSM 107296
157854	S. enterica subsp. enterica strain 240, DSM 107297
157855	S. enterica subsp. enterica strain 241, DSM 107298
157856	S. enterica subsp. enterica strain 256, DSM 107299
157857	S. enterica subsp. enterica strain 261, DSM 107300
157858	S. enterica subsp. enterica strain 310, DSM 107301
157859	S. enterica subsp. enterica strain 311, DSM 107302
157860	S. enterica subsp. enterica strain 375, DSM 107303
157861	S. enterica subsp. enterica strain 386, DSM 107304
157862	S. enterica subsp. enterica strain 399, DSM 107305
157863	S. enterica subsp. enterica strain 407, DSM 107306
157864	S. enterica subsp. enterica strain 422, DSM 107307
157865	S. enterica subsp. enterica strain 641, DSM 107308
157866	S. enterica subsp. enterica strain 765, DSM 107309
157867	S. enterica subsp. enterica strain 1150, DSM 107310
157868	S. enterica subsp. enterica strain 164, DSM 107311
157869	S. enterica subsp. enterica strain 259, DSM 107312
164871	S. enterica subsp. enterica JCM 3919
165439	S. enterica subsp. enterica JCM 6977, IFO 14193, NBRC 14193
165440	S. enterica subsp. enterica JCM 6978, IFO 14194, NBRC 14194
165441	S. enterica subsp. enterica JCM 6979, IFO 14209, NBRC 14209
165443	S. enterica subsp. enterica JCM 6981, IFO 14211, NBRC 14211
165444	S. enterica subsp. enterica JCM 6982, IFO 14212, NBRC 14212
178883	S. enterica subsp. enterica Galanos C5, ST033830

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	37

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		97.547

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence LC462181 (>99% sequence identity) for Salmonella enterica from Microbeatlas

Aquatic Samples	2005
Soil Samples	1084
Animal Samples	23018
Plant Samples	1996
Total Samples	28103

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4036175v1 assembly for Salmonella enterica subsp. enterica NBRC 14210	contig	GCA_040361755	59201	68.95

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Salmonella enterica subsp. enterica JCM 6980 gene for 16S ribosomal RNA, partial sequence	LC462181	1464		59201
124043	Salmonella enterica subsp. enterica gene for 16S rRNA, partial sequence, strain: NBRC 14210.	AB680589	1467		59201

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM4036175v1 assembly for Salmonella enterica subsp. enterica NBRC 14210
NCBI: GCA_040361755

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	88.03	no
125439	gram_stain	BacteriaNetⓘ	negative	86.54	no
125439	motility	BacteriaNetⓘ	yes	62.02	no
125439	spore_formation	BacteriaNetⓘ	no	97.55	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us