Clostridium perfringens CCUG 2035 is a bacterium of the family Clostridiaceae.
genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Clostridia |
| Order Eubacteriales |
| Family Clostridiaceae |
| Genus Clostridium |
| Species Clostridium perfringens |
| Full scientific name Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980) |
| Synonyms (2) |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | anaerobe | 99.2 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | ASM2939307v1 assembly for Clostridium perfringens B NCTC3110 | complete | 451751 | 93.95 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 124043 | Clostridium perfringens strain CCUG 2035 16S ribosomal RNA gene, partial sequence. | DQ196136 | 1417 | 1502 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 88.40 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 81.90 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 82.50 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | anaerobe | 99.20 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 73.17 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 83.95 | no |
| 125438 | aerobic | aerobicⓘ | no | 90.73 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 68.63 | no |
| 125438 | thermophilic | thermophileⓘ | no | 91.35 | no |
| 125438 | flagellated | motile2+ⓘ | no | 65.71 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phenotypic and Genotypic Characterization of C. perfringens Isolates from Dairy Cows with a Pathological Puerperium. | Kronfeld H, Kemper N, Holzel CS. | Vet Sci | 10.3390/vetsci9040173 | 2022 | ||
| Phylogeny | Diversity of Clostridium perfringens toxin-genotypes from dairy farms. | Fohler S, Klein G, Hoedemaker M, Scheu T, Seyboldt C, Campe A, Jensen KC, Abdulmawjood A. | BMC Microbiol | 10.1186/s12866-016-0812-6 | 2016 | |
| Phylogeny | Genetic diversity of Clostridium perfringens type A isolates from animals, food poisoning outbreaks and sludge. | Johansson A, Aspan A, Bagge E, Baverud V, Engstrom BE, Johansson KE. | BMC Microbiol | 10.1186/1471-2180-6-47 | 2006 | |
| The nisin O cluster: species dissemination, candidate leader peptide proteases and the role of regulatory systems. | Scadden J, Ansorge R, Romano S, Telatin A, Baker DJ, Evans R, Gherghisan-Filip C, Zhang ZJ, Mayer MJ, Narbad A. | Microbiology (Reading) | 10.1099/mic.0.001531 | 2025 | ||
| Battling Enteropathogenic Clostridia: Phage Therapy for Clostridioides difficile and Clostridium perfringens. | Venhorst J, van der Vossen JMBM, Agamennone V. | Front Microbiol | 10.3389/fmicb.2022.891790 | 2022 | ||
| Metabolism | Production of multiple bacteriocins, including the novel bacteriocin gassericin M, by Lactobacillus gasseri LM19, a strain isolated from human milk. | Garcia-Gutierrez E, O'Connor PM, Colquhoun IJ, Vior NM, Rodriguez JM, Mayer MJ, Cotter PD, Narbad A. | Appl Microbiol Biotechnol | 10.1007/s00253-020-10493-3 | 2020 | |
| Diversity of Mycoplasma hyopneumoniae strains from pigs across Ontario, Canada. | You Q, Eidt J, Bell-Rogers P, Cai HY. | J Vet Diagn Invest | 10.1177/1040638719896283 | 2020 | ||
| Enzymology | Detection and characterization of Clostridium perfringens in the feces of healthy and diarrheic dogs. | Goldstein MR, Kruth SA, Bersenas AM, Holowaychuk MK, Weese JS. | Can J Vet Res | 2012 | ||
| Metabolism | First evidence of production of the lantibiotic nisin P. | Garcia-Gutierrez E, O'Connor PM, Saalbach G, Walsh CJ, Hegarty JW, Guinane CM, Mayer MJ, Narbad A, Cotter PD. | Sci Rep | 10.1038/s41598-020-60623-0 | 2020 | |
| Metabolism | Expression and delivery of an endolysin to combat Clostridium perfringens. | Gervasi T, Horn N, Wegmann U, Dugo G, Narbad A, Mayer MJ. | Appl Microbiol Biotechnol | 10.1007/s00253-013-5128-y | 2014 | |
| Enzymology | A decrease in iron availability to human gut microbiome reduces the growth of potentially pathogenic gut bacteria; an in vitro colonic fermentation study. | Parmanand BA, Kellingray L, Le Gall G, Basit AW, Fairweather-Tait S, Narbad A. | J Nutr Biochem | 10.1016/j.jnutbio.2019.01.010 | 2019 | |
| Enzymology | Discovery of a novel lantibiotic nisin O from Blautia obeum A2-162, isolated from the human gastrointestinal tract. | Hatziioanou D, Gherghisan-Filip C, Saalbach G, Horn N, Wegmann U, Duncan SH, Flint HJ, Mayer MJ, Narbad A. | Microbiology (Reading) | 10.1099/mic.0.000515 | 2017 | |
| Phylogeny | Identification of Clostridium species and DNA fingerprinting of Clostridium perfringens by amplified fragment length polymorphism analysis. | Keto-Timonen R, Heikinheimo A, Eerola E, Korkeala H. | J Clin Microbiol | 10.1128/jcm.01275-06 | 2006 | |
| Pathogenicity | The murein hydrolase of the bacteriophage phi3626 dual lysis system is active against all tested Clostridium perfringens strains. | Zimmer M, Vukov N, Scherer S, Loessner MJ. | Appl Environ Microbiol | 10.1128/aem.68.11.5311-5317.2002 | 2002 | |
| Phylogeny | Characterization of virulence plasmid diversity among Clostridium perfringens type B isolates. | Sayeed S, Li J, McClane BA. | Infect Immun | 10.1128/iai.00838-09 | 2010 | |
| Enzymology | Genomic sequence of bacteriophage ATCC 8074-B1 and activity of its endolysin and engineered variants against Clostridium sporogenes. | Mayer MJ, Gasson MJ, Narbad A. | Appl Environ Microbiol | 10.1128/aem.07884-11 | 2012 | |
| Genetics | Genomic analysis of Clostridium perfringens bacteriophage phi3626, which integrates into guaA and possibly affects sporulation. | Zimmer M, Scherer S, Loessner MJ. | J Bacteriol | 10.1128/jb.184.16.4359-4368.2002 | 2002 | |
| Enzymology | Molecular characterization of a Clostridium difficile bacteriophage and its cloned biologically active endolysin. | Mayer MJ, Narbad A, Gasson MJ. | J Bacteriol | 10.1128/jb.00686-08 | 2008 | |
| Metabolism | Transformation of bile acids by Clostridium perfringens. | Hirano S, Masuda N, Oda H, Mukai H. | Appl Environ Microbiol | 10.1128/aem.42.3.394-399.1981 | 1981 | |
| Pentaplexed quantitative real-time PCR assay for the simultaneous detection and quantification of botulinum neurotoxin-producing clostridia in food and clinical samples. | Kirchner S, Kramer KM, Schulze M, Pauly D, Jacob D, Gessler F, Nitsche A, Dorner BG, Dorner MB. | Appl Environ Microbiol | 10.1128/aem.02490-09 | 2010 | ||
| Pathogenicity | Survival of clostridium perfringens during simulated transport and stability of some plasmid-borne toxin genes under aerobic conditions. | Johansson A, Engstrom BE, Frey J, Johansson KE, Baverud V | Acta Vet Scand | 10.1186/1751-0147-46-241 | 2005 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #44463 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 2035 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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