Name: Clostridium perfringens S107
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2631

Type strain:

Species: Clostridium perfringens

Strain Designation: S107

Culture col. no.: DSM 756, ATCC 13124, ATCC 19408, NCIB 6125, NCTC 6125, NCTC 8237, WDCM 00007, CCUG 1795, CIP 103409, JCM 1290, BCRC 10913, CCM 4435, CECT 376, KCTC 3269, LMG 11264, NCIMB 6125

Strain history: ATCC 13124 <-- NCTC 8237 ("Clostridium welchii") <-- Wellcome Lab.; CN 1491.

NCBI tax ID(s): 195103 (strain), 1502 (species)

Other strains from Clostridium perfringens

Section

Clostridium perfringens S107 is an anaerobe, mesophilic human pathogen that produces toxins and was isolated from bovine.

toxin production
anaerobe
human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	**Clostridium perfringens**
	Full Scientific Name (PNU)	Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)

Synonym

"Bacillus perfringens"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #428]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #428]

Culture medium growth

[Ref.: #428]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #428]

Culture medium composition

expand / minimize

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Culture medium

FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)

[Ref.: #428]

Culture medium growth

[Ref.: #428]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #428]

Culture medium composition

expand / minimize

[Ref.: #428]

Culture medium

CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)

[Ref.: #428]

Culture medium growth

[Ref.: #428]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #428]

Culture medium composition

expand / minimize

[Ref.: #42056]

Culture medium

MEDIUM 20 - for Anaerobic bacteria

[Ref.: #42056]

Culture medium growth

[Ref.: #42056]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #428]	growth	37 °C
[Ref.: #42056]	growth	37 °C
[Ref.: #44424]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #428]	Temperature range	mesophilic
[Ref.: #42056]	Temperature range	mesophilic
[Ref.: #44424]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #428]	Oxygen tolerance	anaerobe
[Ref.: #44424]	Oxygen tolerance	anaerobe

[Ref.: #428]	Name of produced compound	haemolysins
[Ref.: #428]	Name of produced compound	lecithinase
[Ref.: #428]	Name of produced compound	lethal toxins
[Ref.: #428]	Name of produced compound	phospholipase C
[Ref.: #67770]	Name of produced compound	haemolysins
[Ref.: #67770]	Name of produced compound	lethal toxins

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	arginine ChEBI	+	hydrolysis	* from API rID32A
[Ref.: #68367]	cellobiose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	D-glucose ChEBI	+	builds acid from	* from API 20A
[Ref.: #68367]	D-mannose ChEBI	+	builds acid from	* from API 20A
[Ref.: #68380]	D-mannose ChEBI	+	fermentation	* from API rID32A
[Ref.: #68367]	D-xylose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	esculin ChEBI	+	hydrolysis	* from API 20A
[Ref.: #68367]	gelatin ChEBI	+	hydrolysis	* from API 20A
[Ref.: #68367]	L-arabinose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #68367]	L-rhamnose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	lactose ChEBI	+	builds acid from	* from API 20A
[Ref.: #68367]	maltose ChEBI	+	builds acid from	* from API 20A
[Ref.: #68367]	melezitose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68380]	nitrate ChEBI	+	reduction	* from API rID32A
[Ref.: #68380]	raffinose ChEBI	+	fermentation	* from API rID32A
[Ref.: #68367]	raffinose ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	salicin ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	sorbitol ChEBI	-	builds acid from	* from API 20A
[Ref.: #68367]	sucrose ChEBI	+	builds acid from	* from API 20A
[Ref.: #68367]	trehalose ChEBI	+	builds acid from	* from API 20A
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A, API 20A
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A, API 20A
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite
[Ref.: #68380]		indole ChEBI	* from API rID32A, API 20A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A, API 20A

	Enzyme	Enzyme activity	EC number
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #68380]	alkaline phosphatase	+	3.1.3.1	* from API rID32A
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68380]	alpha-fucosidase	+	3.2.1.51	* from API rID32A
[Ref.: #68380]	alpha-galactosidase	+	3.2.1.22	* from API rID32A
[Ref.: #68380]	alpha-glucosidase	+	3.2.1.20	* from API rID32A
[Ref.: #68380]	arginine dihydrolase	+	3.5.3.6	* from API rID32A
[Ref.: #68380]	beta-galactosidase	+	3.2.1.23	* from API rID32A
[Ref.: #68367]	beta-glucosidase	+	3.2.1.21	* from API 20A
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A
[Ref.: #68367]	gelatinase	+		* from API 20A
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #68380]	L-arginine arylamidase	-		* from API rID32A
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API rID32A
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #67770]	phospholipase C		3.1.4.11
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A, API 20A
	Only first 10 entries are displayed. Click here to see all.

API® 20A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Indole productionIND	Urease/urea hydrolysisURE	Acid from D-glucoseGLU	Acid from D-mannitolMAN	Acid from lactoseLAC	Acid from sucroseSAC	Acid from maltoseMAL	Acid from salicinSAL	Acid from D-xyloseXYL	Acid from L-arabinoseARA	Gelatinase/gelatin hydrolysisGEL	Esculin hydrolysis/beta-glucosidaseESC	Acid from glycerolGLY	Acid from cellobioseCEL	Acid from D-mannoseMNE	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from sorbitolSOR	Acid from L-rhamnoseRHA	Acid from trehaloseTRE	CatalaseCAT	Spores presentSPOR	GramGRAM	Morphology coccus="+" rod="-"COCC
[Ref.: #428]	1945	-	-	+	-	+	+	+	-	-	-	+	+	-	-	+	-	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #428]	1922	-	-	+	+/-	+	+	+	-	-	-	+	+	+	-	+	-	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #428]	11821	-	+	+	+	-	+	-	-	-	+	+	+	-	+	+	-	+	-	-	-	-	-	+	-	-	-	-	-	-
[Ref.: #428]	11728	-	+	+	+	+	+	+	-	-	+	+	+	-	+	+	-	+	-	-	-	-	-	+	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #428]	Sample type/isolated from	bovine

[Ref.: #44424]	Sample type/isolated from	Bovine

[Ref.: #67770]	Sample type/isolated from	Bovine
* marker position based on {}

Isolation sources categories

#Host

#Mammals

#Bovinae (Cow, Cattle)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB573713 (>99% sequence identity) for Clostridium perfringens subclade from Microbeatlas

Aquatic Samples	8762
Soil Samples	3063
Animal Samples	75654
Plant Samples	847
Total Samples	88326

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #428]	Pathogenicity (human)	yes
[Ref.: #428]	Pathogenicity (animal)	yes
[Ref.: #428]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Clostridium perfringens gene for 16S rRNA, partial sequence, strain: ATCC 13124	AB075767	1460	ENA	195103 tax ID	*
[Ref.: #20218]	Clostridium perfringens partial 16S rRNA gene, strain ATCC 13124	FM207095	390	ENA	195103 tax ID	*
[Ref.: #20218]	Clostridium perfringens strain DSM 756 16S ribosomal RNA gene, partial sequence	HQ012013	933	ENA	1502 tax ID	*
[Ref.: #20218]	Clostridium perfringens 16S ribosomal RNA	M59103	1462	ENA	1502 tax ID	*
[Ref.: #20218]	{16S/23S ribosomal DNA spacer region} [Clostridium perfringens, ATCC 13124, Genomic, 239 nt]	S51964	239	ENA	1502 tax ID	*
[Ref.: #67770]	Clostridium perfringens gene for 16S ribosomal RNA, partial sequence, strain: JCM 1290	AB573713	1474	ENA	1502 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Clostridium perfringens ATCC 13124 ATCC 13124	GCA_000013285	complete	GenBank	195103 tax ID	*
[Ref.: #66792]	Clostridium perfringens ATCC 13124	195103.10	complete	PATRIC	195103 tax ID	*
[Ref.: #66792]	Clostridium perfringens strain FDAARGOS_903 strain Not applicable	1502.1789	complete	PATRIC	1502 tax ID	*
[Ref.: #66792]	Clostridium perfringens ATCC 13124	637000077	complete	JGI IMG/M	195103 tax ID	*
[Ref.: #67770]	Clostridium perfringens ATCC 13124, complete genome	CP000246		ENA	195103 tax ID
[Ref.: #66792]	Lysinibacillus fusiformis UBA3547	GCA_002376675	scaffold	PATRIC	28031 tax ID	*

[Ref.: #428]	GC-content	24.0 mol%
[Ref.: #67770]	GC-content	24 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #428]

Culture collection no.

DSM 756, ATCC 13124, ATCC 19408, NCIB 6125, NCTC 6125, NCTC 8237, WDCM 00007, CCUG 1795, CIP 103409, JCM 1290, BCRC 10913, CCM 4435, CECT 376, KCTC 3269, LMG 11264, NCIMB 6125

[Ref.: #20218]

Associated Passport(s) in StrainInfo

7948, 7940, 7941, 7951, 7952, 7953, 866259

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Production of phospholipase C (alpha-toxin), haemolysins and lethal toxins by Clostridium perfringens types A to D.	Mollby R, Holme T, Nord CE, Smyth CJ, Wadstrom T	J Gen Microbiol	10.1099/00221287-96-1-137	1976	*
Cultivation	Collaborative evaluation of a proposed reference dilution method of susceptibility testing of anaerobic bacteria.	Sutter VL, Barry AL, Wilkins TD, Zabransky RJ	Antimicrob Agents Chemother	10.1128/AAC.16.4.495	1979	*
Enzymology	Collagenase of Clostridium perfringens type A: degradation of human complement component C1q.	Wolf U, Bauer D, Traub WH	Zentralbl Bakteriol	10.1016/s0934-8840(11)80215-x	1991	*
Pathogenicity	Quality control criteria for testing the susceptibility of anaerobic bacteria to meropenem.	Zabransky RJ, Bayola-Mueller L, Jenkins SG, Pitkin DR, Schreckenberger PC, Celig DM, Spiegel CA	J Clin Microbiol	10.1128/jcm.28.12.2804-2805.1990	1990	*
Pathogenicity	Quality control guidelines for testing cefotetan in the reference agar dilution procedure for susceptibility testing of anaerobic bacteria.	Zabransky RJ, Bobey DG, Barry AL, Allen SD, Fuchs PC, Gerlach EH, Thornsberry C, Sheikh W, Jones RN	J Clin Microbiol	10.1128/jcm.27.1.190-191.1989	1989	*
Pathogenicity	Effect of antibiotics on toxin production and viability of Clostridium perfringens.	Stevens DL, Maier KA, Mitten JE	Antimicrob Agents Chemother	10.1128/AAC.31.2.213	1987	*
Cultivation	Evaluation of some commercial media for the cultivation and enumeration of Clostridium perfringens from the chick intestine.	Dafwang II, Ricke SC, Schaefer DM, Brotz PG, Sunde ML, Pringle DJ	Poult Sci	10.3382/ps.0660652	1987	*
Cultivation	Growth curves of Clostridium perfringens in Schaedler and brain heart infusion broths.	Traub WH, Spohr M, Bauer D	Zentralbl Bakteriol Mikrobiol Hyg A	10.1016/s0176-6724(87)80035-4	1987	*
Enzymology	Cloning and expression in Escherichia coli of the perfringolysin O (theta-toxin) gene from Clostridium perfringens and characterization of the gene product.	Tweten RK	Infect Immun	10.1128/iai.56.12.3228-3234.1988	1988	*
Enzymology	Inactivation of cefoxitin and moxalactam by Bacteroides bivius beta-lactamase.	Malouin F, Fijalkowski C, Lamothe F, Lacroix JM	Antimicrob Agents Chemother	10.1128/AAC.30.5.749	1986	*
Pathogenicity	Establishment of MICs of moxalactam for control and reference anaerobic organisms in agar dilution and microdilution techniques.	Sutter VL, Emmerman J, Randall E, Zabransky RJ, Birk RJ	Antimicrob Agents Chemother	10.1128/AAC.27.3.424	1985	*
Pathogenicity	Evaluation of broth microdilution susceptibility results for anaerobic organisms by use of a rapid direct colony inoculum.	Mangels JI, Lindberg LH	J Clin Microbiol	10.1128/jcm.21.2.269-272.1985	1985	*
Pathogenicity	Establishment of minimum inhibitory concentrations of cefoperazone for control and reference anaerobic organisms.	Zabransky RJ, Randall E, Sutter VL, Birk RJ, Westenfelder G, Emmerman J, Ghoneim AT	J Clin Microbiol	10.1128/jcm.17.4.711-714.1983	1983	*
Phylogeny	Synthesis and evaluation of a non-radioactive gene probe for the detection of C.perfringens alpha toxin.	Schlapp T, Blaha I, Bauerfeind R, Wieler LH, Schoepe H, Weiss R, Baljer G	Mol Cell Probes	10.1016/s0890-8508(95)80034-4	1995	*
Metabolism	Role of alpha-toxin in Clostridium perfringens infection determined by using recombinants of C. perfringens and Bacillus subtilis.	Ninomiya M, Matsushita O, Minami J, Sakamoto H, Nakano M, Okabe A	Infect Immun	10.1128/iai.62.11.5032-5039.1994	1994	*
Phylogeny	16S ribosomal DNA sequences of anaerobic cocci and proposal of Ruminococcus hansenii comb. nov. and Ruminococcus productus comb. nov.	Ezaki T, Li N, Hashimoto Y, Miura H, Yamamoto H	Int J Syst Bacteriol	10.1099/00207713-44-1-130	1994	*
Genetics	Comparison of the alpha-toxin genes of Clostridium perfringens type A and C strains: evidence for extragenic regulation of transcription.	Katayama S, Matsushita O, Minami J, Mizobuchi S, Okabe A	Infect Immun	10.1128/iai.61.2.457-463.1993	1993	*
Enzymology	Diversity in the properties of two sialidase isoenzymes produced by Clostridium perfringens spp.	Roggentin P, Kleineidam RG, Schauer R	Biol Chem Hoppe Seyler	10.1515/bchm3.1995.376.9.569	1995	*
Pathogenicity	Molecular variation between the alpha-toxins from the type strain (NCTC 8237) and clinical isolates of Clostridium perfringens associated with disease in man and animals.	Ginter A, Williamson ED, Dessy F, Coppe P, Bullifent H, Howells A, Titball RW	Microbiology (Reading)	10.1099/13500872-142-1-191	1996	*
Metabolism	Characterization of a toxin-deficient Clostridium perfringens strain, KZ1340.	Shimizu T, Ohtani K, Ba-Thein W, Inui S, Nakamura S, Hayashi H	Microbiol Immunol	10.1111/j.1348-0421.1996.tb03329.x	1996	*
Phylogeny	Improved isolation of Clostridium perfringens from foal faeces.	Netherwood T, Chanter N, Mumford JA	Res Vet Sci	10.1016/s0034-5288(96)90090-9	1996	*
Genetics	Collagenase gene (colA) is located in the 3'-flanking region of the perfringolysin O (pfoA) locus in Clostridium perfringens.	Ohtani K, Bando M, Swe T, Banu S, Oe M, Hayashi H, Shimizu T	FEMS Microbiol Lett	10.1111/j.1574-6968.1997.tb10186.x	1997	*
Phylogeny	Evaluation of the synergistic haemolysis (CAMP-like) test in the identification of motile, mesophilic Aeromonas species.	Gubash SM	Zentralbl Bakteriol	10.1016/s0934-8840(97)80073-4	1997	*
Phylogeny	Crystallization and preliminary X-ray diffraction studies of alpha-toxin from two different strains (NCTC8237 and CER89L43) of Clostridium perfringens.	Basak AK, Howells A, Eaton JT, Moss DS, Naylor CE, Miller J, Titball RW	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444998005186	1998	*
Enzymology	A Clostridium perfringens hem gene cluster contains a cysG(B) homologue that is involved in cobalamin biosynthesis.	Koyama M, Katayama S, Kaji M, Taniguchi Y, Matsushita O, Minami J, Morita S, Okabe A	Microbiol Immunol	10.1111/j.1348-0421.1999.tb03355.x	1999	*
Cultivation	An effective lacticin biopreservative in fresh pork sausage.	Scannell AG, Ross RP, Hill C, Arendt EK	J Food Prot	10.4315/0362-028x-63.3.370	2000	*
Pathogenicity	Bactericidal properties of the chloroform fraction from rhizomes of Aristolochia paucinervis Pomel.	Gadhi CA, Hatier R, Mory F, Marchal L, Weber M, Benharref A, Jana M, Lozniewski A	J Ethnopharmacol	10.1016/s0378-8741(01)00185-4	2001	*
Pathogenicity	In vitro effect of intracanal medicaments on strict anaerobes by means of the broth dilution method.	Rosa OP, Torres SA, Ferreira CM, Ferreira FB	Pesqui Odontol Bras	10.1590/s1517-74912002000100006	2002	*
Pathogenicity	Activity of endodontic antibacterial agents against selected anaerobic bacteria.	Ferreira CM, da Silva Rosa OP, Torres SA, Ferreira FB, Bernardinelli N	Braz Dent J	10.1590/s0103-64402002000200008	2002	*
Pathogenicity	Growth inhibition of intestinal bacteria and mutagenicity of 2-, 3-, 4-aminobiphenyls, benzidine, and biphenyl.	Chung KT, Adris P	Toxicol In Vitro	10.1016/s0887-2333(02)00131-5	2003	*
Cultivation	Susceptibility of Clostridium perfringens to C-C fatty acids.	Skrivanova E, Marounek M, Dlouha G, Kanka J	Lett Appl Microbiol	10.1111/j.1472-765X.2005.01709.x	2005	*
Metabolism	Inhibition of Clostridium perfringens by a novel strain of Bacillus subtilis isolated from the gastrointestinal tracts of healthy chickens.	Teo AY, Tan HM	Appl Environ Microbiol	10.1128/AEM.71.8.4185-4190.2005	2005	*
Enzymology	Cloning, recombinant production, crystallization and preliminary X-ray diffraction studies of a family 84 glycoside hydrolase from Clostridium perfringens.	Ficko-Blean E, Boraston AB	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/S1744309105024012	2005	*
Genetics	Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens.	Myers GS, Rasko DA, Cheung JK, Ravel J, Seshadri R, DeBoy RT, Ren Q, Varga J, Awad MM, Brinkac LM, Daugherty SC, Haft DH, Dodson RJ, Madupu R, Nelson WC, Rosovitz MJ, Sullivan SA, Khouri H, Dimitrov GI, Watkins KL, Mulligan S, Benton J, Radune D, Fisher DJ, Atkins HS, Hiscox T, Jost BH, Billington SJ, Songer JG, McClane BA, Titball RW, Rood JI, Melville SB, Paulsen IT	Genome Res	10.1101/gr.5238106	2006	*
Metabolism	Detection of fibronectin-binding proteins in Clostridium perfringens.	Katayama S, Nozu N, Yokoyama M, Hitsumoto Y	Acta Med Okayama	10.18926/AMO/30720	2006	*
Pathogenicity	Carbon catabolite repression of type IV pilus-dependent gliding motility in the anaerobic pathogen Clostridium perfringens.	Mendez M, Huang IH, Ohtani K, Grau R, Shimizu T, Sarker MR	J Bacteriol	10.1128/JB.01407-07	2007	*
Enzymology	Identification of galacto-N-biose phosphorylase from Clostridium perfringens ATCC13124.	Nakajima M, Nihira T, Nishimoto M, Kitaoka M	Appl Microbiol Biotechnol	10.1007/s00253-007-1319-8	2008	*
Proteome	Immunization against Clostridium perfringens cells elicits protection against Clostridium tetani in mouse model: identification of cross-reactive proteins using proteomic methodologies.	Alam SI, Bansod S, Singh L	BMC Microbiol	10.1186/1471-2180-8-194	2008	*
Metabolism	Characterization of two putative fibronectin-binding proteins of Clostridium perfringens.	Katayama S, Nozu N, Okuda M, Hirota S, Yamasaki T, Hitsumoto Y	Anaerobe	10.1016/j.anaerobe.2009.03.001	2009	*
Metabolism	Differential proteomic analysis of Clostridium perfringens ATCC13124; identification of dominant, surface and structure associated proteins.	Alam SI, Bansod S, Kumar RB, Sengupta N, Singh L	BMC Microbiol	10.1186/1471-2180-9-162	2009	*
Pathogenicity	Virulence for chickens of Clostridium perfringens isolated from poultry and other sources.	Cooper KK, Theoret JR, Stewart BA, Trinh HT, Glock RD, Songer JG	Anaerobe	10.1016/j.anaerobe.2010.02.006	2010	*
Enzymology	Comparative proteomic analysis of extracellular proteins of Clostridium perfringens type A and type C strains.	Sengupta N, Alam SI, Kumar B, Kumar RB, Gautam V, Kumar S, Singh L	Infect Immun	10.1128/IAI.00374-10	2010	*
Pathogenicity	Comparison of a nontoxic variant of Clostridium perfringens alpha-toxin with the toxic wild-type strain.	Vachieri SG, Clark GC, Alape-Giron A, Flores-Diaz M, Justin N, Naylor CE, Titball RW, Basak AK	Acta Crystallogr D Biol Crystallogr	10.1107/S090744491003369X	2010	*
Enzymology	Lytic enzyme discovery through multigenomic sequence analysis in Clostridium perfringens.	Schmitz JE, Ossiprandi MC, Rumah KR, Fischetti VA	Appl Microbiol Biotechnol	10.1007/s00253-010-2982-8	2010	*
Metabolism	Structural analysis of CPF_2247, a novel alpha-amylase from Clostridium perfringens.	Ficko-Blean E, Stuart CP, Boraston AB	Proteins	10.1002/prot.23116	2011	*
Pathogenicity	Comparative transcription analysis and toxin production of two fluoroquinolone-resistant mutants of Clostridium perfringens.	Park S, Park M, Rafii F	BMC Microbiol	10.1186/1471-2180-13-50	2013	*
Pathogenicity	A recombinant carboxy-terminal domain of alpha-toxin protects mice against Clostridium perfringens.	Nagahama M, Oda M, Kobayashi K, Ochi S, Takagishi T, Shibutani M, Sakurai J	Microbiol Immunol	10.1111/1348-0421.12036	2013	*
Pathogenicity	Effect of fluoroquinolone resistance selection on the fitness of three strains of Clostridium perfringens.	Park M, Sutherland JB, Kim JN, Rafii F	Microb Drug Resist	10.1089/mdr.2013.0056	2013	*
Pathogenicity	Growth-Inhibiting and morphostructural effects of constituents identified in Asarum heterotropoides root on human intestinal bacteria.	Perumalsamy H, Jung MY, Hong SM, Ahn YJ	BMC Complement Altern Med	10.1186/1472-6882-13-245	2013	*
Pathogenicity	Inhibition of Clostridium perfringens growth by potassium lactate during an extended cooling of cooked uncured ground turkey breasts.	Kennedy KM, Milkowski AL, Glass KA	J Food Prot	10.4315/0362-028X.JFP-13-106	2013	*
Enzymology	Comparative analysis of extractable proteins from Clostridium perfringens type A and type C strains showing varying degree of virulence.	Dwivedi P, Alam SI, Kumar O, Kumar RB	Anaerobe	10.1016/j.anaerobe.2015.07.006	2015	*
Biotechnology	Changes in microbial community during biohydrogen production using gamma irradiated sludge as inoculum.	Yin Y, Wang J	Bioresour Technol	10.1016/j.biortech.2015.10.027	2015	*
Genetics	Identification of a Bacteria-Specific Binding Protein from the Sequenced Bacterial Genome.	Kong M, Ryu S	J Microbiol Biotechnol	10.4014/jmb.1510.10056	2016	*
Enzymology	Cloning, characterization, and production of three alpha-L-fucosidases from Clostridium perfringens ATCC 13124.	Fan S, Zhang H, Chen X, Lu L, Xu L, Xiao M	J Basic Microbiol	10.1002/jobm.201500582	2015	*
Metabolism	The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium perfringens.	Noach I, Pluvinage B, Laurie C, Abe KT, Alteen MG, Vocadlo DJ, Boraston AB	J Mol Biol	10.1016/j.jmb.2016.03.020	2016	*
Pathogenicity	Ex vivo pharmacokinetic/pharmacodynamic relationship of valnemulin against Clostridium perfringens in plasma, the small intestinal and caecal contents of rabbits.	Zhou YF, Yu Y, Sun J, Tao MT, Zhou WJ, Li X, Liao XP, Liu YH	Anaerobe	10.1016/j.anaerobe.2016.04.005	2016	*
Metabolism	Putative function of hypothetical proteins expressed by Clostridium perfringens type A strains and their protective efficacy in mouse model.	Alam SI, Dwivedi P	Infect Genet Evol	10.1016/j.meegid.2016.06.040	2016	*
Enzymology	Efficient and Regioselective Synthesis of beta-GalNAc/GlcNAc-Lactose by a Bifunctional Transglycosylating beta-N-Acetylhexosaminidase from Bifidobacterium bifidum.	Chen X, Xu L, Jin L, Sun B, Gu G, Lu L, Xiao M	Appl Environ Microbiol	10.1128/AEM.01325-16	2016	*
Stress	Effect of Trehalose and Trehalose Transport on the Tolerance of Clostridium perfringens to Environmental Stress in a Wild Type Strain and Its Fluoroquinolone-Resistant Mutant.	Park M, Mitchell WJ, Rafii F	Int J Microbiol	10.1155/2016/4829716	2016	*
Enzymology	Exposure to beta-lactams results in the alteration of penicillin-binding proteins in Clostridium perfringens.	Park M, Rafii F	Anaerobe	10.1016/j.anaerobe.2017.02.004	2017	*
Pathogenicity	Effect of continuous sub-culturing on infectivity of Clostridium perfringens ATCC13124 in mouse gas gangrene model.	Kumar RB, Alam SI	Folia Microbiol (Praha)	10.1007/s12223-017-0503-1	2017	*
Metabolism	Structural characterization of wall and lipidated polysaccharides from Clostridium perfringens ATCC 13124.	Vinogradov E, Aubry A, Logan SM	Carbohydr Res	10.1016/j.carres.2017.06.003	2017	*
Enzymology	Enzymatic Synthesis of 6'-Sialyllactose, a Dominant Sialylated Human Milk Oligosaccharide, by a Novel exo-alpha-Sialidase from Bacteroides fragilis NCTC9343.	Guo L, Chen X, Xu L, Xiao M, Lu L	Appl Environ Microbiol	10.1128/AEM.00071-18	2018	*
Biotechnology	Evaluation of Lactobacillus plantarum encapsulated with Eleutherine americana oligosaccharide extract as food additive in yoghurt.	Phoem AN, Mayiding A, Saedeh F, Permpoonpattana P	Braz J Microbiol	10.1007/s42770-018-0017-2	2018	*
Pathogenicity	[A study on clinical application of a novel reagent detecting toxigenic strains of Clostridium difficile].	Wang SM, Wang ZY	Zhonghua Yi Xue Za Zhi	10.3760/cma.j.issn.0376-2491.2018.48.013	2018	*
Phylogeny	Capsular Polysaccharide Is a Receptor of a Clostridium perfringens Bacteriophage CPS1.	Ha E, Chun J, Kim M, Ryu S	Viruses	10.3390/v11111002	2019	*
Pathogenicity	beta-Lactam resistance development affects binding of penicillin-binding proteins (PBPs) of Clostridium perfringens to the fluorescent penicillin, BOCILLIN FL.	Park M, Sutherland JB, Rafii F	Anaerobe	10.1016/j.anaerobe.2020.102179	2020	*
Phylogeny	Antibiotic resistance, genome analysis and further safe traits of Clostridium perfringens ICVB082; a strain capable of producing an inhibitory compound directed only against a closely related pathogenic strain.	Vieco-Saiz N, Belguesmia Y, Vachee A, Le Marechal C, Salvat G, Drider D	Anaerobe	10.1016/j.anaerobe.2020.102177	2020	*
Phylogeny	Biodiversity and Phylogenetic Relationships of Novel Bacteriocinogenic Strains Isolated from Animal's Droppings at the Zoological Garden of Lille, France.	Eveno M, Salouhi A, Belguesmia Y, Bazinet L, Gancel F, Fliss I, Drider D	Probiotics Antimicrob Proteins	10.1007/s12602-020-09657-4	2021	*
Phylogeny	Dual Inhibition of Salmonella enterica and Clostridium perfringens by New Probiotic Candidates Isolated from Chicken Intestinal Mucosa.	Lone A, Mottawea W, Ait Chait Y, Hammami R	Microorganisms	10.3390/microorganisms9010166	2021	*
Pathogenicity	In-laboratory quality control of nutrients for automatic bacteriology analyzer YUNON(R)Labstar 50.	Boronina LG, Samatova EV, Kukushkina MP, Panova SA, Ustyugova SS	Klin Lab Diagn	10.51620/0869-2084-2021-66-2-110-114	2021	*
	Use of gamma-irradiation to reduce Clostridium perfringens on ready-to-eat bovine tripe.	Parry-Hanson A, Hall A, Minnaar A, Buys EM	Meat Sci	10.1016/j.meatsci.2007.06.010	2007	*
	Screening of Bacteriocin-producing Enterococcus faecalis Strains for Antagonistic Activities against Clostridium perfringens.	Han SK, Shin MS, Park HE, Kim SY, Lee WK	Korean J Food Sci Anim Resour	10.5851/kosfa.2014.34.5.614	2014	*
	Inhibition of Clostridium perfringens using Bacteriophages and Bacteriocin Producing Strains.	Heo S, Kim MG, Kwon M, Lee HS, Kim GB	Korean J Food Sci Anim Resour	10.5851/kosfa.2018.38.1.88	2018	*
	Galleria mellonella Infection Model Identifies Both High and Low Lethality of Clostridium perfringens Toxigenic Strains and Their Response to Antimicrobials.	Kay S, Edwards J, Brown J, Dixon R	Front Microbiol	10.3389/fmicb.2019.01281	2019	*
	Immunogenicity of a newly developed vaccine against Clostridium perfringens alpha-toxin in rabbits and cattle.	Saadh MJ, Lafi FF, Dahadha AA, Albannan MS	Vet World	10.14202/vetworld.2022.1617-1623	2022	*

References

#428	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 756

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#42056 ; Curators of the CIP;
#44424 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 1795

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68367

Automatically annotated from API 20A .

#68380

Automatically annotated from API rID32A .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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