Name: Clostridium perfringens CIP 106157
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 139291

Type strain:

Species: Clostridium perfringens

Culture col. no.: CIP 106157, NCTC 8798, AIP 10201

Strain history: CIP <- 1999, J.P. Carlier, Inst. Pasteur, Paris, France: strain AIP 10201 <- NCTC <- B.C. Hobbs, PHLS, London, UK

NCBI tax ID(s): 1502 (species)

SI-ID 67932

CIP 106157, NCTC 8798, CCUG 42877, CCUG 42881

Other strains from Clostridium perfringens

Section

Clostridium perfringens CIP 106157 is an anaerobe, spore-forming, mesophilic bacterium of the family Clostridiaceae.

Gram-positive
spore-forming
anaerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	**Clostridium perfringens**
	Full Scientific Name (LPSN)	Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)

Synonym

"Bacillus perfringens"

Information on morphological and physiological properties Morphology

[Ref.: #41430]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #41430]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #41430]

Culture medium

MEDIUM 20 - for Anaerobic bacteria

[Ref.: #41430]

Culture medium growth

[Ref.: #41430]

Culture medium composition

expand / minimize

[Ref.: #41430]

Culture medium

CIP Medium 20

[Ref.: #41430]

Culture medium growth

[Ref.: #41430]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #41430]			growth	37 °C

[Ref.: #41430]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #41430]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %99.508

[Ref.: #41430]	Ability of spore formation	yes
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %99.999

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #41430]	cellobiose ChEBI	-	degradation
[Ref.: #41430]	D-arabinose ChEBI	-	degradation
[Ref.: #41430]	D-fructose ChEBI	+/-	degradation
[Ref.: #41430]	D-glucose ChEBI	+/-	degradation
[Ref.: #41430]	D-xylose ChEBI	-	degradation
[Ref.: #41430]	esculin ChEBI	-	hydrolysis
[Ref.: #41430]	lactose ChEBI	+/-	degradation
[Ref.: #41430]	maltose ChEBI	+/-	degradation
[Ref.: #41430]	nitrate ChEBI	-	reduction
[Ref.: #41430]	nitrate ChEBI	+	respiration
[Ref.: #41430]	nitrite ChEBI	+	reduction
[Ref.: #41430]	salicin ChEBI	-	degradation
[Ref.: #41430]	sucrose ChEBI	+/-	degradation
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #41430]		metronidazole ChEBI	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #41430]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #41430]	amylase	-
[Ref.: #41430]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #41430]	caseinase	+	3.4.21.50
[Ref.: #41430]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #41430]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #41430]	gelatinase	+/-
[Ref.: #41430]	lecithinase	+
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #41430]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #41430]	oxidase	-
[Ref.: #41430]	protease	+
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #41430]	tween esterase	-
[Ref.: #41430]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #41430]	1551	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #41430]	9295	-	+	+	+	-	-	-	-	+	-	+	+	+	+	-	+	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #41430]	Sample type/isolated from	Food, Meat rissole
[Ref.: #41430]	Country	United Kingdom
[Ref.: #41430]	Country ISO 3 Code	GBR
[Ref.: #41430]	Continent	Europe
[Ref.: #41430]	Isolation date	1953

[Ref.: #41430]	Country	United Kingdom
[Ref.: #41430]	Country ISO 3 Code	GBR
[Ref.: #41430]	Continent	Europe
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #41430]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Clostridium perfringens NCTC8798	GCA_900447105	contig	GenBank	1502 tax ID	*
[Ref.: #66792]	Clostridium perfringens strain NCTC8798	1502.485	wgs	PATRIC	1502 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Clostridium perfringens strain NCTC8798 PATRIC: 1502.485
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Clostridium perfringens strain NCTC8798 PATRIC: 1502.485
[Ref.: #69480]	motile	no	84.641	no
[Ref.: #69480]	gram-positive	yes	95.69	no
[Ref.: #69480]	anaerobic	yes	97.72	no
[Ref.: #69480]	aerobic	no	94.84	no
[Ref.: #69480]	halophile	no	66.573	no
[Ref.: #69480]	spore-forming	yes	90.694	no
[Ref.: #69480]	thermophile	no	97.455	yes
[Ref.: #69480]	glucose-util	yes	90.474	no
[Ref.: #69480]	flagellated	no	92.192	no
[Ref.: #69480]	glucose-ferment	yes	78.418	no

Availability in culture collections External links

[Ref.: #41430]

Culture collection no.

CIP 106157, NCTC 8798, AIP 10201

[Ref.: #95829]

SI-ID 67932

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Metabolism	CodY Promotes Sporulation and Enterotoxin Production by Clostridium perfringens Type A Strain SM101.	Li J, Freedman JC, Evans DR, McClane BA	Infect Immun	10.1128/IAI.00855-16	2017	*
Enzymology	Cloning, sequence, and transcriptional regulation of the operon encoding a putative N-acetylmannosamine-6-phosphate epimerase (nanE) and sialic acid lyase (nanA) in Clostridium perfringens.	Walters DM, Stirewalt VL, Melville SB	J Bacteriol	10.1128/JB.181.15.4526-4532.1999	1999	*
Cultivation	A new growth and in vitro sporulation medium for Clostridium perfringens.	Meyer M, Tholozan JL	Lett Appl Microbiol	10.1046/j.1365-2672.1999.00494.x	1999	*
Pathogenicity	Comparison of different methods of cell lysis and protein measurements in Clostridium perfringens: application to the cell volume determination.	Guerlava P, Izac V, Tholozan JL	Curr Microbiol	10.1007/pl00006756	1998	*
Stress	Stimulation of the onset of sporulation of Clostridium perfringens type A by netropsin and distamycin.	Ryu S, Labbe RG	Curr Microbiol	10.1007/BF01570717	1992	*
Cultivation	Influence of carbohydrates on growth and sporulation of Clostridium perfringens in a defined medium with or without guanosine.	Sacks LE	Appl Environ Microbiol	10.1128/aem.46.5.1169-1175.1983	1983	*
Cultivation	Effects of pH shifts, bile salts, and glucose on sporulation of Clostridium perfringens NCTC 8798.	Hickey CS, Johnson MG	Appl Environ Microbiol	10.1128/aem.41.1.124-129.1981	1981	*
Cultivation	Ultrastructure of sporulating cells of Clostridium perfringens type A grown in the presence of raffinose.	Labbe RG, Rufner R	Can J Microbiol	10.1139/m80-190	1980	*
Metabolism	Influence of starch source on sporulation and enterotoxin production by Clostridium perfringens type A.	Labbe R, Somers E, Duncan C	Appl Environ Microbiol	10.1128/aem.31.3.455-457.1976	1976	*
Pathogenicity	Repair of heat-injured Clostridium perfringens spores during outgrowth.	Barach JT, Flowers RS, Adams DM	Appl Microbiol	10.1128/am.30.5.873-875.1975	1975	*
Stress	In vitro production of Clostridium perfringens enterotoxin and its detection by reversed passive hemagglutination.	Uemura T, Sakaguchi G, Riemann HP	Appl Microbiol	10.1128/am.26.3.381-385.1973	1973	*
Pathogenicity	Assay methods for Clostridium perfringens type A enterotoxin.	Genigeorgis C, Sakaguchi G, Riemann H	Appl Microbiol	10.1128/am.26.1.111-115.1973	1973	*
Metabolism	A paracrystalline inclusion formed during sporulation of enterotoxin-producing strains of Clostridium perfringens type A.	Duncan CL, King GJ, Frieben WR	J Bacteriol	10.1128/jb.114.2.845-859.1973	1973	*
Enzymology	Biological characteristics of Clostridium perfringens type A enterotoxin.	Stark RL, Duncan CL	Infect Immun	10.1128/iai.4.2.89-96.1971	1971	*
	A comparative study on the conditions of growth and sporulation of three strains of Clostridium perfringens type A.	Decaudin M, Tholozan JL	Can J Microbiol	10.1139/m96-044	1996	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#41430 Collection of Institut Pasteur ; Curators of the CIP; CIP 106157

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#95829

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID67932.1 )

* These data were automatically processed and therefore are not curated

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Clostridium perfringens strain NCTC8798

Clostridium perfringens strain NCTC8798

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