Strain identifier
version 8.1 (current version)
General
@ref: 44463
BacDive-ID: 141458
keywords: genome sequence, Bacteria
description: Clostridium perfringens CCUG 2035 is a bacterium of the family Clostridiaceae.
NCBI tax id
- NCBI tax id: 1502
- Matching level: species
doi: 10.13145/bacdive141458.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Clostridiaceae
- genus: Clostridium
- species: Clostridium perfringens
- full scientific name: Clostridium perfringens (Veillon and Zuber 1898) Hauduroy et al. 1937 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus perfringens
@ref: 44463
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Clostridiaceae
genus: Clostridium
species: Clostridium perfringens
type strain: no
Sequence information
Genome sequences
- @ref: 66792
- description: Clostridium perfringens B NCTC3110
- accession: GCA_029393075
- assembly level: complete
- database: ncbi
- NCBI tax ID: 451751
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 79.825 | no |
| flagellated | no | 91.023 | no |
| gram-positive | yes | 93.617 | no |
| anaerobic | yes | 96.796 | no |
| aerobic | no | 96.308 | no |
| halophile | no | 79.436 | no |
| spore-forming | yes | 87.449 | no |
| glucose-ferment | yes | 77.493 | no |
| thermophile | no | 98.885 | no |
| glucose-util | yes | 89.987 | no |
External links
@ref: 44463
culture collection no.: CCUG 2035, NCTC 3110
straininfo link
- @ref: 97129
- straininfo: 52914
literature
- topic: Pathogenicity
- Pubmed-ID: 16398335
- title: Survival of clostridium perfringens during simulated transport and stability of some plasmid-borne toxin genes under aerobic conditions.
- authors: Johansson A, Engstrom BE, Frey J, Johansson KE, Baverud V
- journal: Acta Vet Scand
- DOI: 10.1186/1751-0147-46-241
- year: 2005
- mesh: Clostridium perfringens/genetics/*growth & development, Enterotoxins/*genetics, Oxygen/metabolism, *Plasmids, Temperature, Time Factors, Transportation
- topic2: Metabolism
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 44463 | Curators of the CCUG | https://www.ccug.se/strain?id=2035 | Culture Collection University of Gothenburg (CCUG) (CCUG 2035) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 97129 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID52914.1 |