Pseudomonas fluorescens (DSM 50091, ATCC 17397, ICPB 2657-12)

Name: Pseudomonas fluorescens (DSM 50091, ATCC 17397, ICPB 2657-12)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12852

Type strain

Strain Designation 12, 216

Culture col. no. DSM 50091 ATCC 17397 ICPB 2657-12 12 CIP 73.25 7 more

NCBI tax ID(s) 294

Special Collections DSMZ CIP JMRC

History DSMZ <- ICPB <- R.Y. Stanier; 12 <- Lab. Microbiol., Delft CIP <- 1973, Inst. Rech. Chimie Appliquée, France <- Beerens, Inst. Pasteur, Lille, France <- ATCC <- R.Y. Stanier, Inst. Pasteur, Paris, France: strain 12 <- den Dooren de Jong, Lab. Microbiol., Delft, The Netherlands: strain 216

Links

Pseudomonas fluorescens 12 is an obligate aerobe, Gram-negative, motile animal pathogen that was isolated from tap water.

Gram-negative motile rod-shaped obligate aerobe animal pathogen 16S sequence Bacteria

Name and taxonomic classification

SI-ID 1871

LMG 5916,ATCC 17397,ATCC 25323,DSM 50091,IMET 11046,NCIB 10525,NCIMB 10525,CIP 73.25,LMD 26.43,CECT 4898,NCCB 26043,BCRC 13902,CCRC 13902,CFBP 2123,CFBP 3148

@ref 20215

Last LPSN update 2026-05-29 08:27:54

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas fluorescens

Full scientific name Pseudomonas fluorescens Migula 1895 (Approved Lists 1980)

BacDive ID	Other strains from **Pseudomonas fluorescens** (99)	Type strain
12851	P. fluorescens DSM 50090, ATCC 13525, ICPB 3200, NCIB 9046, ... (type strain)
12825	P. fluorescens 1175, DSM 1976
12827	P. fluorescens B599, DSM 2764
12828	P. fluorescens AR 11, DSM 4358, NCDO 2085
12829	P. fluorescens WS 1760, DSM 6147
12830	P. fluorescens ST, DSM 6290
12831	P. fluorescens EMK, DSM 6308
12833	P. fluorescens IRB110, DSM 6607
12834	P. fluorescens IRB120, DSM 6608
12835	P. fluorescens IRB130, DSM 6609
12836	P. fluorescens pUTK21, 5RL, DSM 6699
12837	P. fluorescens pUTK21, HK44, DSM 6700
12838	P. fluorescens AB VII, DSM 6757
12839	P. fluorescens PSC, DSM 7122
12840	P. fluorescens MBC 1, DSM 7153
12842	P. fluorescens PCR, DSM 7355
12843	P. fluorescens JD1, DSM 8542
12844	P. fluorescens JD2, DSM 8543
12845	P. fluorescens II, DSM 8369, NCIMB 8859
12846	P. fluorescens 4, DSM 8567
12848	P. fluorescens Tween B, DSM 9958
12850	P. fluorescens SK1, DSM 16274
12853	P. fluorescens 411, DSM 50106, ATCC 17826, ICPB 2711-411, ...
12854	P. fluorescens 108, 52-22, DSM 50108, ATCC 17482, CIP 104377, ...
12855	P. fluorescens DSM 50124, ATCC 17581, ICPB 2656-214
12856	P. fluorescens 15, DSM 50148, ATCC 17533, ICPB 2440-15
12858	P. fluorescens 1291, LA, DSM 50415, ATCC 12983, ICPB 2278, ...
12859	P. fluorescens ES1-129-5, DSM 30511
12860	P. fluorescens 92, DSM 23471
128377	P. fluorescens SF002755,
24369	P. fluorescens PWD33, DSM 11531
24370	P. fluorescens PWD34, DSM 11532
24371	P. fluorescens DSM 50101, ATCC 17387, ICPB 2657-2, Stanier ...
24372	P. fluorescens PJ253, DSM 50120, ATCC 17561, ICPB 2656-194
134423	P. fluorescens BA3SM1, CIP 110551
134568	P. fluorescens B10, CIP 106483, ATCC 948, IFO 3903, CCEB ...
134777	P. fluorescens CIP 63.26, CCEB 488
135120	P. fluorescens PMW6, CIP 104683, ATCC 39005, NCIMB 11615
137905	P. fluorescens 3749, CIP 102156
137942	P. fluorescens 215-86, CIP 102245
138074	P. fluorescens 52-1C, CIP 104605, ATCC 15453
138894	P. fluorescens CIP 63.47, ATCC 6972, LMG 1799, NCIMB 8194, ...
139769	P. fluorescens B-1606, DSM 50161, ATCC 17636, ICPB 2805-269, ...
141244	P. fluorescens CCUG 369, ATCC 17567
141379	P. fluorescens CCUG 1320, ATCC 17562, LMG 5940
141398	P. fluorescens CCUG 1428, NCTC 10688
141468	P. fluorescens CCUG 2088, NRRL B-1123, ATCC 10757
141593	P. fluorescens CCUG 3367, ATCC 19373, ATCC 23323, NCTC 1381
143398	P. fluorescens CCUG 18892
145593	P. fluorescens CCUG 28921
145658	P. fluorescens CCUG 29164
145761	P. fluorescens CCUG 29521
145794	P. fluorescens CCUG 29606
145826	P. fluorescens CCUG 29727
146312	P. fluorescens CCUG 30871
146676	P. fluorescens CCUG 31774
146677	P. fluorescens CCUG 31775
146678	P. fluorescens CCUG 31776
146679	P. fluorescens CCUG 31777
146764	P. fluorescens CCUG 32081
146879	P. fluorescens CCUG 32348
146915	P. fluorescens CCUG 32444
146922	P. fluorescens CCUG 32456 A
147480	P. fluorescens CCUG 33665
147487	P. fluorescens CCUG 33687
147857	P. fluorescens CCUG 34393
147953	P. fluorescens CCUG 34574
147954	P. fluorescens CCUG 34575 A
148032	P. fluorescens CCUG 34712
148211	P. fluorescens CCUG 35042
148620	P. fluorescens CCUG 35733
148804	P. fluorescens CCUG 35958
151752	P. fluorescens CCUG 44791
151931	P. fluorescens CCUG 45242
153000	P. fluorescens CCUG 48229
153803	P. fluorescens CCUG 51106, ATCC 17386, LMG 5167, NCPPB 1804
154555	P. fluorescens CCUG 54396
157427	P. fluorescens IMI 346683
157428	P. fluorescens IMI 347502
157429	P. fluorescens IMI 347507
157430	P. fluorescens IMI 347511
157431	P. fluorescens IMI 347531
157432	P. fluorescens IMI 349019
157433	P. fluorescens IMI 347506
157801	P. fluorescens FW300-N2E2, DSM 106119
157802	P. fluorescens FW300-N1B4, DSM 106120
157803	P. fluorescens FW300-N2C3, DSM 106121
157804	P. fluorescens GW456-L13, DSM 106123
157805	P. fluorescens FW300-N2E3, DSM 106124
161307	P. fluorescens JCM 13057, ATCC 949, IFO 3507, NBRC 3507, ...
161308	P. fluorescens JCM 13059, ATCC 11253, NRRL B-1244
161474	P. fluorescens JCM 14347, ATCC 14150, IFO 15840, LMG 14675, ...
161958	P. fluorescens JCM 17186, FERM P-11027, NBRC 107686
162688	P. fluorescens JCM 20007, ATCC 15916, IAM 1008
162702	P. fluorescens JCM 20030, IAM 1051
162704	P. fluorescens JCM 20032, ATCC 15917, IAM 1055
162712	P. fluorescens JCM 20046, IAM 1092, IFO 12568, NBRC 12568
162722	P. fluorescens JCM 20064, ATCC 31419, IAM 1126
163414	P. fluorescens JCM 2779, AJ 2089, IAM 12405

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
119409	negative	rod-shaped

Pigmentation

@ref	Production	Name
119409		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12635	REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)	Medium recipe at MediaDive	Name: REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
33488	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
12635	PSEUDOMONAS AGAR F (DSMZ Medium 907)	Medium recipe at MediaDive	Name: PSEUDOMONAS AGAR F (DSMZ Medium 907) Composition: Agar 15.0 g/l Glycerol 10.0 g/l Proteose peptone 10.0 g/l Tryptone 10.0 g/l MgSO4 1.5 g/l K2HPO4 1.5 g/l Distilled water
12635	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
119409	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
12635	positive	growth	30
12635	positive	growth	28
33488	positive	growth	30
119409	positive	growth	30
119409	negative	growth	5
119409	negative	growth	10
119409	negative	growth	41
119409	negative	growth	45

Physiology and metabolism

Oxygen tolerance

119409

Oxygen toleranceobligate aerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68369	29016 ChEBI	arginine	+	hydrolysis	from API 20NE
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
119409	16947 ChEBI	citrate	+	carbon source
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	-	builds acid from	from API 50CH acid
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
119409	17632 ChEBI	nitrate	-	reduction
119409	17632 ChEBI	nitrate	-	respiration
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
119409	16301 ChEBI	nitrite	-	reduction
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
119409	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
119409	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	+	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
119409	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
119409	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
119409	ornithine decarboxylase	-	4.1.1.17
119409	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
119409	tryptophan deaminase	-
119409	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119409	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
12635	-	-	-	+	-	+	+	-	+	+	+	+	+	-	+	+	-	+	+	+	+
12635	-	-	-	+	-	-	-	-	+	+	+	+	+	-	+	+	-	+	+	+	+
12635	-	-	-	+	-	+	-	-	+	+	+	+	+	-	+	+	-	+	+	+	+

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
119409	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
119409	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Freshwater
#Engineered	#Built environment	#Water reservoir (Aquarium/pool)
#Engineered	#Built environment	-

Isolation

@ref	Sample type	Isolation date
12635	tap water
119409	Environment, Tap water	1926

Taxonmaps

69479

Global distribution of 16S sequence AF094727 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	976
Soil Samples	555
Animal Samples	2173
Plant Samples	1759
Total Samples	5463

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
12635	yes, in single cases		1	Risk group (German classification) According to TRBA 466
119409			1	Risk group (French classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Pseudomonas fluorescens strain ATCC 17397 16S ribosomal RNA gene, partial sequence	AF094727	1417		294
20218	Pseudomonas fluorescens strain ATCC 17397 16S ribosomal RNA gene, partial sequence	JN630889	791		294

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Dual-Temperature Microbiological Control of Cellular Products: A Potential Impact for Bacterial Screening of Platelet Concentrates?	Vollmer T, Knabbe C, Dreier J.	Microorganisms	10.3390/microorganisms11092350	2023
	Microbial investigation of cleanability of different plastic and metal surfaces used by the food industry.	Waldhans C, Hebel M, Herbert U, Spoelstra P, Barbut S, Kreyenschmidt J.	J Food Sci Technol	10.1007/s13197-023-05778-0	2023
Metabolism	Role of the Tat ransport system in nitrous oxide reductase translocation and cytochrome cd1 biosynthesis in Pseudomonas stutzeri.	Heikkila MP, Honisch U, Wunsch P, Zumft WG.	J Bacteriol	10.1128/jb.183.5.1663-1671.2001	2001
Genetics	Biological Characterization of Pseudomonas fluorescens Phage Pf17397_F_PD1 and Its Application in Food Preservation.	Yan N, Xia H, Hou W, Wang H, Wang H, Zhou M.	J Food Prot	10.1016/j.jfp.2023.100125	2023
	An Evaluation of the Sensitivity and Applicability of a Droplet Digital Polymerase Chain Reaction Assay to Simultaneously Detect Pseudomonas aeruginosa and Pseudomonas fragi in Foods.	Huang J, Zhai L, Wang J, Sun X, Wang B, Wei Z.	Foods	10.3390/foods13101453	2024
	Antimicrobial Activity of Red Alga Flour (Gelidium sp.) and Its Effect on Quality Retention of Scomber scombrus during Refrigerated Storage.	Miranda JM, Trigo M, Barros-Velazquez J, Aubourg SP.	Foods	10.3390/foods11070904	2022
	Customized antimicrobial efficacy tests offer superior evaluation of growth inhibitor efficacy for liquid microbial products.	Gorsuch JP, Jones Z.	Heliyon	10.1016/j.heliyon.2020.e03419	2020
Enzymology	Detection of food spoilage and pathogenic bacteria based on ligation detection reaction coupled to flow-through hybridization on membranes.	Bohme K, Cremonesi P, Severgnini M, Villa TG, Fernandez-No IC, Barros-Velazquez J, Castiglioni B, Calo-Mata P.	Biomed Res Int	10.1155/2014/156323	2014
	Antibacterial and Antifungal Activities of Spices.	Liu Q, Meng X, Li Y, Zhao CN, Tang GY, Li HB.	Int J Mol Sci	10.3390/ijms18061283	2017
Metabolism	Production of rhamnolipids by Pseudomonas chlororaphis, a nonpathogenic bacterium.	Gunther NW, Nunez A, Fett W, Solaiman DK.	Appl Environ Microbiol	10.1128/aem.71.5.2288-2293.2005	2005
Phylogeny	Bacterial species determination from DNA-DNA hybridization by using genome fragments and DNA microarrays.	Cho JC, Tiedje JM.	Appl Environ Microbiol	10.1128/aem.67.8.3677-3682.2001	2001
	Effect of Two Plant Species, Flax (Linum usitatissinum L.) and Tomato (Lycopersicon esculentum Mill.), on the Diversity of Soilborne Populations of Fluorescent Pseudomonads.	Lemanceau P, Corberand T, Gardan L, Latour X, Laguerre G, Boeufgras J, Alabouvette C.	Appl Environ Microbiol	10.1128/aem.61.3.1004-1012.1995	1995
Metabolism	Glucose uptake and phosphorylation in Pseudomonas fluorescens.	Eisenberg RC, Butters SJ, Quay SC, Friedman SB.	J Bacteriol	10.1128/jb.120.1.147-153.1974	1974
	New selective media for enumeration and recovery of fluorescent pseudomonads from various habitats.	Gould WD, Hagedorn C, Bardinelli TR, Zablotowicz RM.	Appl Environ Microbiol	10.1128/aem.49.1.28-32.1985	1985
Enzymology	New selective agent for isolation of Pseudomonas aeruginosa.	Marold LM, Freedman R, Chamberlain RE, Miyashiro JJ.	Appl Environ Microbiol	10.1128/aem.41.4.977-980.1981	1981
	Protein composition of Rhodopseudomonas sphaeroides outer membrane.	Baumgardner D, Deal C, Kaplan S.	J Bacteriol	10.1128/jb.143.1.265-273.1980	1980
Metabolism	Siderophore typing, a powerful tool for the identification of fluorescent and nonfluorescent pseudomonads.	Meyer JM, Geoffroy VA, Baida N, Gardan L, Izard D, Lemanceau P, Achouak W, Palleroni NJ.	Appl Environ Microbiol	10.1128/aem.68.6.2745-2753.2002	2002
	Low Molecular Weight Alginate Oligosaccharides as Alternatives to PEG for Enhancement of the Diffusion of Cationic Nanoparticles Through Cystic Fibrosis Mucus.	Maeshima R, Tagalakis AD, Gyftaki-Venieri D, Jones SA, Rye PD, Tondervik A, Astrand OAH, Hart SL.	Adv Healthc Mater	10.1002/adhm.202400510	2025
Enzymology	Mutational Analyses of Glucose Dehydrogenase and Glucose-6-Phosphate Dehydrogenase Genes in Pseudomonas fluorescens Reveal Their Effects on Growth and Alginate Production.	Maleki S, Maerk M, Valla S, Ertesvag H.	Appl Environ Microbiol	10.1128/aem.03653-14	2015
Enzymology	Exploiting Mannuronan C-5 Epimerases in Commercial Alginate Production.	Tondervik A, Aarstad OA, Aune R, Maleki S, Rye PD, Dessen A, Skjak-Braek G, Sletta H.	Mar Drugs	10.3390/md18110565	2020
	Strain Construction and Process Development for Efficient Recombinant Production of Mannuronan C-5 Epimerases in Hansenula polymorpha.	Tondervik A, Aune R, Degelmann A, Piontek M, Ertesvag H, Skjak-Braek G, Sletta H.	Front Plant Sci	10.3389/fpls.2022.837891	2022
	Unraveling the molecular mechanism of polysaccharide lyases for efficient alginate degradation.	Rivas-Fernandez JP, Vuillemin M, Pilgaard B, Klau LJ, Fredslund F, Lund-Hanssen C, Welner DH, Meyer AS, Morth JP, Meilleur F, Aachmann FL, Rovira C, Wilkens C.	Nat Commun	10.1038/s41467-025-56754-5	2025
	A new and improved host-independent plasmid system for RK2-based conjugal transfer.	Strand TA, Lale R, Degnes KF, Lando M, Valla S.	PLoS One	10.1371/journal.pone.0090372	2014
	Mechanistic Basis for Understanding the Dual Activities of the Bifunctional Azotobacter vinelandii Mannuronan C-5-Epimerase and Alginate Lyase AlgE7.	Gaardlos M, Heggeset TMB, Tondervik A, Teze D, Svensson B, Ertesvag H, Sletta H, Aachmann FL.	Appl Environ Microbiol	10.1128/aem.01836-21	2022
Metabolism	Role of the Pseudomonas fluorescens alginate lyase (AlgL) in clearing the periplasm of alginates not exported to the extracellular environment.	Bakkevig K, Sletta H, Gimmestad M, Aune R, Ertesvag H, Degnes K, Christensen BE, Ellingsen TE, Valla S.	J Bacteriol	10.1128/jb.187.24.8375-8384.2005	2005
Metabolism	The Pseudomonas fluorescens AlgG protein, but not its mannuronan C-5-epimerase activity, is needed for alginate polymer formation.	Gimmestad M, Sletta H, Ertesvag H, Bakkevig K, Jain S, Suh SJ, Skjak-Braek G, Ellingsen TE, Ohman DE, Valla S.	J Bacteriol	10.1128/jb.185.12.3515-3523.2003	2003
	Energy Landscape of Alginate-Epimerase Interactions Assessed by Optical Tweezers and Atomic Force Microscopy.	Hati AG, Aachmann FL, Stokke BT, Skjak-Braek G, Sletmoen M.	PLoS One	10.1371/journal.pone.0141237	2015

References

#12635	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50091
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#33488	; Curators of the CIP;
#68369	Automatically annotated from API 20NE .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119409	Collection of Institut Pasteur ; Curators of the CIP; CIP 73.25
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudomonas fluorescens (DSM 50091, ATCC 17397, ICPB 2657-12)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Metabolite production

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Enzymes

API zym

API 20NE

API 50CHac

API biotype100

Isolation, sampling and environmental information

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16S sequences

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