Name: Pseudomonas fluorescens JCM 20046
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162712

Type strain:

Species: Pseudomonas fluorescens

Culture col. no.: JCM 20046, IAM 1092, IFO 12568, NBRC 12568

Strain history: IAM 1092 <-- K. Yokozawa 35F ("Pseudomonas schuylkilliensis").

NCBI tax ID(s): 294 (species)

SI-ID 62658

IFO 12568, IAM 1092, NBRC 12568, JCM 20046

Special Collections

Other strains from Pseudomonas fluorescens

Section

Pseudomonas fluorescens JCM 20046 is a bacterium that was isolated from Cistern .

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Species	**Pseudomonas fluorescens**
	Full Scientific Name (LPSN)	Pseudomonas fluorescens Migula 1895 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Cistern (water)
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence LC571926 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	448
Soil Samples	833
Animal Samples	521
Plant Samples	662
Total Samples	2464

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pseudomonas fluorescens JCM 20046 gene for 16S rRNA, partial sequence	LC571926	1459	GenBank ENA	294 tax ID
[Ref.: #67770]	Pseudomonas fluorescens gene for 16S rRNA, partial sequence, strain: NBRC 12568	AB680296	1462	GenBank ENA	294 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 20046, IAM 1092, IFO 12568, NBRC 12568

[Ref.: #113542]

SI-ID 62658

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#113542

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID62658.1 )

* These data were automatically processed and therefore are not curated

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