Pseudomonas fluorescens (DSM 50090, ATCC 13525, ICPB 3200)

Name: Pseudomonas fluorescens (DSM 50090, ATCC 13525, ICPB 3200)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12851

Type strain

Culture col. no. DSM 50090 ATCC 13525 ICPB 3200 NCIB 9046 NCTC 10038 20 more

NCBI tax ID(s) 1215100 294

Special Collections DSMZ CCUG JCM CIP Literature strains JMRC

History DSMZ <- ICPB <- ATCC <- NCTC <- M. E. Rhodes JCM <-- Y. Kosako 85003 <-- Nissui Pharm. Co., Ltd. <-- ATCC 13525 <-- NCTC 10038 <-- M. E. Rhodes. CIP <- 1969, M. Véron, Necker Hosp., France <- NCIB <- M. E. Rhodes: strain 28/5, Reading, UK

Links

Pseudomonas fluorescens DSM 50090 is an obligate aerobe, Gram-negative, rod-shaped animal pathogen that has a faint greenish-yellow pigmentation and has multiple antibiotic resistances.

antibiotic resistance Gram-negative rod-shaped pigmented obligate aerobe animal pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 4055

LMG 1794,ATCC 13525,CCM 2115,CCUG 1253,CECT 378,DSM 50090,IAM 12022,ICMP 3512,IFO 14160,IMET 10619,NCDO 1524,NCIB 9046,NCPPB 1964,NCTC 10038,PDDCC 3512,NBIMCC 8758,CIP 6913,CCUG 2030,JCM 5963,CCRC 11028,NCIMB 9046,IMI 347502,VKM B-894,NCFB 1524,CFBP 2102,HAMBI 27,VTT E-93443,AS 1.1802,NBRC 14160,NRRL B-14678,NCCB 76040,LMD 76.40,BCRC 11028,CCT 3178,CCT 0595,CCT 2718,ICMP 3513,KCTC 12453,KACC 10327,KACC 10415,NCIMB 30164,NCAIM B.01925,CCM 2,CDBB 1243,ACM 441,NRRL B-2641,CIP 69.13,CNCTC 5793,CGMCC 1.1802

@ref 20215

Last LPSN update 2026-05-29 08:27:54

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas fluorescens

Full scientific name Pseudomonas fluorescens Migula 1895 (Approved Lists 1980)

BacDive ID	Other strains from **Pseudomonas fluorescens** (99)	Type strain
12825	P. fluorescens 1175, DSM 1976
12827	P. fluorescens B599, DSM 2764
12828	P. fluorescens AR 11, DSM 4358, NCDO 2085
12829	P. fluorescens WS 1760, DSM 6147
12830	P. fluorescens ST, DSM 6290
12831	P. fluorescens EMK, DSM 6308
12833	P. fluorescens IRB110, DSM 6607
12834	P. fluorescens IRB120, DSM 6608
12835	P. fluorescens IRB130, DSM 6609
12836	P. fluorescens pUTK21, 5RL, DSM 6699
12837	P. fluorescens pUTK21, HK44, DSM 6700
12838	P. fluorescens AB VII, DSM 6757
12839	P. fluorescens PSC, DSM 7122
12840	P. fluorescens MBC 1, DSM 7153
12842	P. fluorescens PCR, DSM 7355
12843	P. fluorescens JD1, DSM 8542
12844	P. fluorescens JD2, DSM 8543
12845	P. fluorescens II, DSM 8369, NCIMB 8859
12846	P. fluorescens 4, DSM 8567
12848	P. fluorescens Tween B, DSM 9958
12850	P. fluorescens SK1, DSM 16274
12852	P. fluorescens 12, 216, DSM 50091, ATCC 17397, ICPB 2657-12, ...
12853	P. fluorescens 411, DSM 50106, ATCC 17826, ICPB 2711-411, ...
12854	P. fluorescens 108, 52-22, DSM 50108, ATCC 17482, CIP 104377, ...
12855	P. fluorescens DSM 50124, ATCC 17581, ICPB 2656-214
12856	P. fluorescens 15, DSM 50148, ATCC 17533, ICPB 2440-15
12858	P. fluorescens 1291, LA, DSM 50415, ATCC 12983, ICPB 2278, ...
12859	P. fluorescens ES1-129-5, DSM 30511
12860	P. fluorescens 92, DSM 23471
128377	P. fluorescens SF002755,
24369	P. fluorescens PWD33, DSM 11531
24370	P. fluorescens PWD34, DSM 11532
24371	P. fluorescens DSM 50101, ATCC 17387, ICPB 2657-2, Stanier ...
24372	P. fluorescens PJ253, DSM 50120, ATCC 17561, ICPB 2656-194
134423	P. fluorescens BA3SM1, CIP 110551
134568	P. fluorescens B10, CIP 106483, ATCC 948, IFO 3903, CCEB ...
134777	P. fluorescens CIP 63.26, CCEB 488
135120	P. fluorescens PMW6, CIP 104683, ATCC 39005, NCIMB 11615
137905	P. fluorescens 3749, CIP 102156
137942	P. fluorescens 215-86, CIP 102245
138074	P. fluorescens 52-1C, CIP 104605, ATCC 15453
138894	P. fluorescens CIP 63.47, ATCC 6972, LMG 1799, NCIMB 8194, ...
139769	P. fluorescens B-1606, DSM 50161, ATCC 17636, ICPB 2805-269, ...
141244	P. fluorescens CCUG 369, ATCC 17567
141379	P. fluorescens CCUG 1320, ATCC 17562, LMG 5940
141398	P. fluorescens CCUG 1428, NCTC 10688
141468	P. fluorescens CCUG 2088, NRRL B-1123, ATCC 10757
141593	P. fluorescens CCUG 3367, ATCC 19373, ATCC 23323, NCTC 1381
143398	P. fluorescens CCUG 18892
145593	P. fluorescens CCUG 28921
145658	P. fluorescens CCUG 29164
145761	P. fluorescens CCUG 29521
145794	P. fluorescens CCUG 29606
145826	P. fluorescens CCUG 29727
146312	P. fluorescens CCUG 30871
146676	P. fluorescens CCUG 31774
146677	P. fluorescens CCUG 31775
146678	P. fluorescens CCUG 31776
146679	P. fluorescens CCUG 31777
146764	P. fluorescens CCUG 32081
146879	P. fluorescens CCUG 32348
146915	P. fluorescens CCUG 32444
146922	P. fluorescens CCUG 32456 A
147480	P. fluorescens CCUG 33665
147487	P. fluorescens CCUG 33687
147857	P. fluorescens CCUG 34393
147953	P. fluorescens CCUG 34574
147954	P. fluorescens CCUG 34575 A
148032	P. fluorescens CCUG 34712
148211	P. fluorescens CCUG 35042
148620	P. fluorescens CCUG 35733
148804	P. fluorescens CCUG 35958
151752	P. fluorescens CCUG 44791
151931	P. fluorescens CCUG 45242
153000	P. fluorescens CCUG 48229
153803	P. fluorescens CCUG 51106, ATCC 17386, LMG 5167, NCPPB 1804
154555	P. fluorescens CCUG 54396
157427	P. fluorescens IMI 346683
157428	P. fluorescens IMI 347502
157429	P. fluorescens IMI 347507
157430	P. fluorescens IMI 347511
157431	P. fluorescens IMI 347531
157432	P. fluorescens IMI 349019
157433	P. fluorescens IMI 347506
157801	P. fluorescens FW300-N2E2, DSM 106119
157802	P. fluorescens FW300-N1B4, DSM 106120
157803	P. fluorescens FW300-N2C3, DSM 106121
157804	P. fluorescens GW456-L13, DSM 106123
157805	P. fluorescens FW300-N2E3, DSM 106124
161307	P. fluorescens JCM 13057, ATCC 949, IFO 3507, NBRC 3507, ...
161308	P. fluorescens JCM 13059, ATCC 11253, NRRL B-1244
161474	P. fluorescens JCM 14347, ATCC 14150, IFO 15840, LMG 14675, ...
161958	P. fluorescens JCM 17186, FERM P-11027, NBRC 107686
162688	P. fluorescens JCM 20007, ATCC 15916, IAM 1008
162702	P. fluorescens JCM 20030, IAM 1051
162704	P. fluorescens JCM 20032, ATCC 15917, IAM 1055
162712	P. fluorescens JCM 20046, IAM 1092, IFO 12568, NBRC 12568
162722	P. fluorescens JCM 20064, ATCC 31419, IAM 1126
163414	P. fluorescens JCM 2779, AJ 2089, IAM 12405

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Cell length	Cell width	Confidence
22942	negative	rod-shaped
22941			1-2 µm	0.3-0.6 µm
119411	negative	rod-shaped
125438					91.596
125438	negative				99

Colony morphology

119411

Hemolysis ability0

Pigmentation

@ref	Production	Color	Name
22941		Fluorescein	faint greenish-yellow
119411			Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12634	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
12634	R2A MEDIUM (DSMZ Medium 830)	Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
42191	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
12634	PSEUDOMONAS AGAR F (DSMZ Medium 907)	Medium recipe at MediaDive	Name: PSEUDOMONAS AGAR F (DSMZ Medium 907) Composition: Agar 15.0 g/l Glycerol 10.0 g/l Proteose peptone 10.0 g/l Tryptone 10.0 g/l MgSO4 1.5 g/l K2HPO4 1.5 g/l Distilled water
12634	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
119411	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
12634	positive	growth	28
12634	positive	growth	30
22942	negative	growth	41
42191	positive	growth	30
67770	positive	growth	26
119411	positive	growth	5-30
119411	negative	growth	37
119411	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
119411	obligate aerobe
125438	aerobe	94.057
125439	facultative anaerobe	90.386

Antibiotic susceptibility testing

	Test 1	Test 2
@ref	12634	12634
Medium	Mueller-Hinton Agar	Mueller-Hinton Agar
Manual annotation	1	1
	Inhibition zone diameter in mm	Inhibition zone diameter in mm
Amikacin 30µg (disc)	30	28
Ampicillin 10µg (disc)	0	0
Aztreonam 30µg (disc)	12	10
Bacitracin 10Unit	0	0
Cefalotin 30µg (disc)	0	0
Cefazolin 30µg (disc)	0	0
Cefotaxime 30µg (disc)	12-14	12
Ceftriaxone 30µg (disc)	10	0
Chloramphenicol 30µg (disc)	18-20	18-20
Clindamycin 10µg (disc)	0	0
Colistin 10µg (disc)	0	12-14
Doxycycline 30µg (disc)	24-26	28
Erythromycin 15µg (disc)	10	8-10
Fosfomycin 50µg (disc)	36	34-36
Gentamicin 10µg (disc)	24	26
Imipenem 10µg (disc)	22	20
Kanamycin 30µg (disc)	22	22
Lincomycin 15µg (disc)	0	0
Linezolid 10µg (disc)	0	0
Mezlocillin 30µg (disc)	16	18
Moxifloxacin 5µg (disc)	28	26
Neomycin 30µg (disc)	22	22
Nitrofurantoin 100µg (disc)	0	0
Norfloxacin 10µg (disc)	36	34
Nystatin 100Unit	0	0
Ofloxacin 5µg (disc)	30	30-32
Oxacillin 5µg (disc)	0	0
Penicillin G 6µg (disc)	0	0
Pipemidic acid 20µg (disc)	22-24	24
Piperacillin/Tazobactam 40µg (disc)	30	28
Polymyxin B 300Unit	12-14	14-16
Quinupristin/Dalfopristin 15µg (disc)	0	0
Teicoplanin 30µg (disc)	0	0
Tetracycline 30µg (disc)	26-28	28
Ticarcillin 75µg (disc)	0	8-10
Vancomycin 30µg (disc)	0	0

Spore formation

@ref	Spore formation	Confidence
22941
125439		98.499

Halophily

@ref	Salt	Growth	Tested relation	Concentration
119411	NaCl	positive	growth	8 %
119411	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
22942	16808 ChEBI	2-dehydro-D-gluconate	+	growth
22941	16808 ChEBI	2-dehydro-D-gluconate	+	other
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
22941	22599 ChEBI	arabinose	+	other
68369	29016 ChEBI	arginine	+	hydrolysis	from API 20NE
22942	16958 ChEBI	beta-alanine	+	growth
22941	17057 ChEBI	cellobiose	-	other
22941	16947 ChEBI	citrate	+	other
119411	16947 ChEBI	citrate	+	carbon source
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
22941	16988 ChEBI	D-ribose	+	other
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
119411	4853 ChEBI	esculin	-	hydrolysis
22941	16236 ChEBI	ethanol	+	other
22941	28757 ChEBI	fructose	+	other
22941	16813 ChEBI	galactitol	-	other
22941	28260 ChEBI	galactose	+	other
22942	5291 ChEBI	gelatin	+	hydrolysis
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
22941	17234 ChEBI	glucose	-	fermentation
22941	17754 ChEBI	glycerol	+	other
22942	15428 ChEBI	glycine	-	growth
22941	35581 ChEBI	indole	-	other
22941	15443 ChEBI	inulin	-	other
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
22941	17716 ChEBI	lactose	+	other
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
22941	15792 ChEBI	malonate	+	other
22941	17306 ChEBI	maltose	+	other
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
22941	29864 ChEBI	mannitol	+	other
22941	37684 ChEBI	mannose	+	other
22941	6731 ChEBI	melezitose	-	other
22941	28053 ChEBI	melibiose	+	other
22942	17268 ChEBI	myo-inositol	+	growth
22941	17268 ChEBI	myo-inositol	+/-	other
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
22942	17632 ChEBI	nitrate	-	reduction
22941	17632 ChEBI	nitrate	-	reduction
119411	17632 ChEBI	nitrate	-	reduction
119411	17632 ChEBI	nitrate	-	respiration
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
119411	16301 ChEBI	nitrite	-	reduction
119411	15882 ChEBI	phenol	+	degradation
22941	16634 ChEBI	raffinose	+	other
22941	26546 ChEBI	rhamnose	+	other
22941	15963 ChEBI	ribitol	+	other
22941	17814 ChEBI	salicin	-	other
22941	30911 ChEBI	sorbitol	+	other
22941	17992 ChEBI	sucrose	+	other
22942	27082 ChEBI	trehalose	+	growth
22941	27082 ChEBI	trehalose	+	other
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
22941	16199 ChEBI	urea	+	other
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE
22942	27266 ChEBI	valine	+	growth
22941	18222 ChEBI	xylose	+	other

Antibiotic resistance

@ref	ChEBI	Metabolite	Resistance conc.
119411		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
12634	28971	Ampicillin	10 µg (disc)	from Antibiotic test
12634	28669	Bacitracin	10 Unit	from Antibiotic test
12634	124991	Cefalotin	30 µg (disc)	from Antibiotic test
12634	474053	Cefazolin	30 µg (disc)	from Antibiotic test
12634	3745	Clindamycin	10 µg (disc)	from Antibiotic test
12634	6472	Lincomycin	15 µg (disc)	from Antibiotic test
12634	63607	Linezolid	10 µg (disc)	from Antibiotic test
12634	71415	Nitrofurantoin	100 µg (disc)	from Antibiotic test
12634	7660	Nystatin	100 Unit	from Antibiotic test
12634	7809	Oxacillin	5 µg (disc)	from Antibiotic test
12634	18208	Penicillin G	6 µg (disc)	from Antibiotic test
12634		Quinupristin/Dalfopristin	15 µg (disc)	from Antibiotic test
12634	29687	Teicoplanin	30 µg (disc)	from Antibiotic test
12634	28001	Vancomycin	30 µg (disc)	from Antibiotic test

Metabolite production

@ref	Chebi-ID	Metabolite	Production
119411	35581 ChEBI	indole
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test	Methylred-test
22941	17234 ChEBI	glucose		-
68369	35581 ChEBI	indole	-		from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
119411	alcohol dehydrogenase	+	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
119411	amylase	-
22942	arginine dihydrolase	+	3.5.3.6
68369	arginine dihydrolase	+	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
119411	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
119411	caseinase	-	3.4.21.50
22941	catalase	+	1.11.1.6
119411	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
22942	cytochrome oxidase	+	1.9.3.1
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
119411	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
22942	gelatinase	+
119411	gelatinase	-
68369	gelatinase	-		from API 20NE
119411	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
119411	lipase	-
68382	lipase (C 14)	-		from API zym
22941	lysine decarboxylase	-	4.1.1.18
119411	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
119411	ornithine decarboxylase	-	4.1.1.17
119411	oxidase	+
22941	phenylalanine deaminase	-	4.3.1.5
119411	protease	-
68382	trypsin	+	3.4.21.4	from API zym
119411	tryptophan deaminase	-
119411	tween esterase	-
119411	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119411	-	+	+	+	-	+	+	-	+	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
12634	-	-	-	+	-	+	-	-	+	+	+	+	+	-	+	+	-	+	+	-	+
12634	-	-	-	+	-	-	-	-	+	+	+	+	+	-	+	+	-	+	+	-	+
12634	-	-	-	+	-	-	-	-	+	+	+	+	+	-	+	+	-	+	+	-	+
12634	-	-	-	+	-	-	-	-	+	+	+	+	+	-	+	+	-	+	+	-	+
12634	-	-	-	+	-	-	-	-	+	+	+	+	+	-	+	+	-	+	+	-	+
12634	-	-	-	+	-	-	-	-	+	+	+	+	+	-	+	+	-	+	+	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
119411	not determinedn.d.	+	+	+	+	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	+	+	+	-	-	+	+	+	-	-	+	+	-	-	+	-	-	+	+	-	-	+	+	+	+	+	-	+	+	+	+	+	-	+	+	-	+	+	+	-	-	-	-	-	-	+	+	+	-	+	+	+	-	+	+	+	+	+	+	-	+	+	+	+	+	+	+	+	+	+	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Built environment	#Container (Reservoir)

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent	Isolation date
12634	pre-filter tanks	United Kingdom	GBR	Europe
67770	Pre-filter tanks
119411	Environment, Pre-filter water-works tanks	United Kingdom	GBR	Europe	1951

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
12634	yes, in single cases		1	Risk group (German classification) According to TRBA 466
119411			1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	42727_B01 assembly for Pseudomonas fluorescens NCTC10038	complete	GCA_900475215	294.428	2875548937	294	98.06
66792	IMG-taxon 2617270901 annotated assembly for Pseudomonas fluorescens ATCC 13525	chromosome	GCA_900215245	294.284	2617270901	294	89.46
67770	ASM126984v1 assembly for Pseudomonas fluorescens DSM 50090	contig	GCA_001269845	294.200	2675903647	294	76.26
67770	ASM785816v1 assembly for Pseudomonas fluorescens DSM 50090	contig	GCA_007858165	294.564	8119808910	294	72.41
66792	ASM209159v1 assembly for Pseudomonas fluorescens NBRC 14160	contig	GCA_002091595	1215100.3	2969332252	1215100	65.92
66792	ASM294368v1 assembly for Pseudomonas fluorescens ATCC 13525	scaffold	GCA_002943685	294.394	8010786304	294	55.37
67770	ASM341757v1 assembly for Pseudomonas fluorescens ATCC 13525	contig	GCA_003417575	294.455	2917106160	294	0

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Pseudomonas fluorescens strain ATCC 13525 16S ribosomal RNA gene, partial sequence	AF094725	1458	294
20218	Pseudomonas fluorescens partial 16S rRNA gene, type strain ICMP 3512T	AJ308308	1371	294
20218	Pseudomonas fluorescens strain ATCC 13525 16S ribosomal RNA gene, partial sequence	FJ971870	791	294
20218	Pseudomonas fluorescens strain BCRC 11028 16S-23S ribosomal RNA intergenic spacer, complete sequence	EU014587	515	294
20218	Pseudomonas fluorescens strain CCM 2115 16S ribosomal RNA gene, complete sequence	DQ207731	1520	294
20218	Pseudomonas fluorescens partial 16S rRNA gene, strain LBPS2	HE617670	1451	294
20218	P.fluorescens 16S rRNA gene	Z76662	1507	294
20218	Pseudomonas fluorescens 16S rRNA	D11188	218	294
20218	Pseudomonas fluorescens 16S rRNA	D11237	215	294
20218	Pseudomonas fluorescens 16S rRNA	D11286	194	294
20218	Pseudomonas fluorescens 16S rRNA gene, complete sequence	D84013	1527	294
20218	Pseudomonas fluorescens gene for 16S ribosomal RNA, partial sequence, strain: IAM 12022	D86001	1329	294
20218	Pseudomonas fluorescens partial 16S rRNA gene, strain LBPr5	HE617668	1454	294
20218	Pseudomonas fluorescens strain LMG1794 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence	AF127588	543	294
20218	Pseudomonas fluorescens gene for 16S rRNA, partial sequence, strain: NBRC 14160	AB680568	1462	294
67770	Pseudomonas fluorescens JCM 5963 gene for 16S ribosomal RNA, partial sequence	LC462170	1459	294
124043	Pseudomonas fluorescens partial 16S rRNA gene, strain NCPPB 1964 (BYOTIPE A)	LN849856	933	294
124043	Pseudomonas fluorescens strain NBRC 14160 16S ribosomal RNA gene, partial sequence.	MN527018	485	294
124043	Pseudomonas fluorescens strain NBRC 14160 16S ribosomal RNA gene, partial sequence.	MN527279	485	294
124043	Pseudomonas fluorescens strain NBRC 14160 16S ribosomal RNA gene, partial sequence.	MN535395	485	294
124043	Pseudomonas fluorescens strain CCM 2115 16S ribosomal RNA gene, partial sequence.	MN535397	485	294
124043	Pseudomonas fluorescens strain DSM 50090 16S ribosomal RNA gene, partial sequence.	MT605329	1365	294
124043	Pseudomonas fluorescens culture DSM:50090 16S ribosomal RNA gene, partial sequence.	KX186944	1431	294
124043	Pseudomonas fluorescens strain ATCC 13525 16S ribosomal RNA gene, partial sequence.	MH173805	871	294
124043	Pseudomonas fluorescens strain IAM 12022 16S ribosomal RNA gene, partial sequence.	PP388918	1527	294
124043	Pseudomonas fluorescens strain NBRC 14160 16S ribosomal RNA gene, partial sequence.	MH191400	1451	294

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: 42727_B01 assembly for Pseudomonas fluorescens NCTC10038
BV-BRC: 294.428

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	negative	88.93	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	90.39	no
125439	motility	BacteriaNetⓘ	yes	76.36	no
125439	spore_formation	BacteriaNetⓘ	no	98.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudomonas fluorescens NCTC10038
NCBI: GCA_900475215.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.00	yes
125438	anaerobic	anaerobicⓘ	no	98.92	yes
125438	aerobic	aerobicⓘ	yes	94.06	no
125438	spore-forming	spore-formingⓘ	no	85.72	yes
125438	thermophilic	thermophileⓘ	no	99.00	no
125438	flagellated	motile2+ⓘ	yes	91.60	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Genomic and phenotypic insight into antimicrobial resistance of Pseudomonas fluorescens from King George Island, Antarctica.	Silverio MP, Schultz J, Parise MTD, Parise D, Viana MVC, Nogueira W, Ramos RTJ, Goes-Neto A, Azevedo VAC, Brenig B, Bonelli RR, Rosado AS.	Front Microbiol	10.3389/fmicb.2025.1535420	2025
	Yielding behaviour of chemically treated Pseudomonas fluorescens biofilms.	Charlton SGV, Jana S, Chen J.	Biofilm	10.1016/j.bioflm.2024.100209	2024
	Valorization of fish from the Adriatic Sea: nutritional properties and shelf life prolongation of Aphia minuta through essential oils.	Marino R, Albenzio M, Della Malva A, Racioppo A, Speranza B, Bevilacqua A.	Front Nutr	10.3389/fnut.2024.1454228	2024
	Biocontrol Potential of Rhizobacteria Against Passalora fulva and Tuta absoluta: A Sustainable Approach for Tomato Protection.	Bahoch S, Elaasri A, Chafiki S, Elame F, Wifaya A, Mayad EH, Bouharroud R, Qessaoui R.	Plants (Basel)	10.3390/plants14172672	2025
	Counteracting Grey Mould (Botrytis cinerea) in Grapevine 'Glera' Using Three Putative Biological Control Agent Strains (Paraburkholderia sp., Pseudomonas sp., and Acinetobacter sp.): Impact on Symptoms, Yield, and Gene Expression.	Mian G, Belfiore N, Marcuzzo P, Spinelli F, Tomasi D, Colautti A.	Microorganisms	10.3390/microorganisms12081515	2024
	Multifaceted Applications of Synthesized Silver Nanoparticles From Marine Fungus Aspergillus flavus MK4: Antimicrobial, Anticancer, and Wound-Healing Properties.	Al-Agamy MH, Kelany MS, Alshehri S, Alhuzani MR, Hamed MM, Sabra W, Mahdi WA.	Biomed Res Int	10.1155/bmri/7161915	2025
	Antioxidant, Anti-Inflammatory, Antimicrobial, and Anticancer Activities of Pomegranate Juice Concentrate.	Habib HM, El-Gendi H, El-Fakharany EM, El-Ziney MG, El-Yazbi AF, Al Meqbaali FT, Ibrahim WH.	Nutrients	10.3390/nu15122709	2023
	Identification and Characterization of Corynaridin, a Novel Linaridin from Corynebacterium lactis.	Pashou E, Reich SJ, Reiter A, Weixler D, Eikmanns BJ, Oldiges M, Riedel CU, Goldbeck O.	Microbiol Spectr	10.1128/spectrum.01756-22	2023
	Changes in cell surface properties of Pseudomonas fluorescens by adaptation to NaCl induced hypertonic stress.	Abu Quba AA, Goebel MO, Karagulyan M, Miltner A, Kastner M, Bachmann J, Schaumann GE, Diehl D.	FEMS Microbes	10.1093/femsmc/xtac028	2023
Enzymology	Antimicrobial efficacy and inactivation kinetics of a novel LED-based UV-irradiation technology.	Schobel H, Diem G, Kiechl J, Chiste D, Bertacchi G, Mayr A, Wilflingseder D, Lass-Florl C, Posch W.	J Hosp Infect	10.1016/j.jhin.2022.12.023	2023
	Genome-mining-guided discovery of coumarubrin: A novel aminocoumarin-substituted rubromycin antibiotic.	Weddeling HG, Sowa ST, Bosshardt S, Schwimbersky L, Rakhmanov M, Teufel R.	J Ind Microbiol Biotechnol	10.1093/jimb/kuaf018	2024
	Novel Technologies for Preserving Ricotta Cheese: Effects of Ultraviolet and Near-Ultraviolet-Visible Light.	Ricciardi EF, Pedros-Garrido S, Papoutsis K, Lyng JG, Conte A, Del Nobile MA.	Foods	10.3390/foods9050580	2020
	Exploring the identification of multiple bacteria on stainless steel using multi-scale spectral imaging from microscopic to macroscopic.	Xu JL, Herrero-Langreo A, Lamba S, Ferone M, Swanson A, Caponigro V, Scannell AGM, Gowen AA.	Sci Rep	10.1038/s41598-022-19617-3	2022
Metabolism	Critical parameters in cultivation of experimental biofilms using the example of Pseudomonas fluorescens.	Reddersen K, Gullmar A, Tonndorf-Martini S, Sigusch BW, Ewald A, Dauben TJ, Martin K, Wiegand C.	J Mater Sci Mater Med	10.1007/s10856-021-06568-w	2021
Phylogeny	Investigation and Rapid Discrimination of Food-Related Bacteria under Stress Treatments Using IR Microspectroscopy.	Klein D, Breuch R, Reinmuller J, Engelhard C, Kaul P.	Foods	10.3390/foods10081850	2021
Phylogeny	Discrimination of Stressed and Non-Stressed Food-Related Bacteria Using Raman-Microspectroscopy.	Klein D, Breuch R, Reinmuller J, Engelhard C, Kaul P.	Foods	10.3390/foods11101506	2022
Pathogenicity	Detection, isolation and characterization of phage-host complexes using BONCAT and click chemistry.	Hellwig P, Dittrich A, Heyer R, Reichl U, Benndorf D.	Front Microbiol	10.3389/fmicb.2024.1434301	2024
	Generation of bright autobioluminescent bacteria by chromosomal integration of the improved lux operon ilux2.	Gregor C.	Sci Rep	10.1038/s41598-022-22068-5	2022
	Deep eutectic solvent enhances antibacterial activity of a modular lytic enzyme against Acinetobacter baumannii.	Kocot AM, Swebocki T, Cieminska K, Lupkowska A, Kapusta M, Grimon D, Laskowska E, Kaczorowska AK, Kaczorowski T, Boukherroub R, Briers Y, Plotka M.	Sci Rep	10.1038/s41598-024-80440-z	2025
Phylogeny	Multilocus sequence based identification and adaptational strategies of Pseudomonas sp. from the supraglacial site of Sikkim Himalaya.	Mukhia S, Kumar A, Kumari P, Kumar R, Kumar S.	PLoS One	10.1371/journal.pone.0261178	2022
Pathogenicity	Recombinant AfusinC, an anionic fungal CSalphabeta defensin from Aspergillus fumigatus, exhibits antimicrobial activity against gram-positive bacteria.	Contreras G, Braun MS, Schafer H, Wink M.	PLoS One	10.1371/journal.pone.0205509	2018
Phylogeny	Ubiquity and Diversity of Cold Adapted Denitrifying Bacteria Isolated From Diverse Antarctic Ecosystems.	Cabezas A, Azziz G, Bovio-Winkler P, Fuentes L, Braga L, Wenzel J, Sabaris S, Tarlera S, Etchebehere C.	Front Microbiol	10.3389/fmicb.2022.827228	2022
	Replacement of l-Amino Acids by d-Amino Acids in the Antimicrobial Peptide Ranalexin and Its Consequences for Antimicrobial Activity and Biodistribution.	Domhan C, Uhl P, Kleist C, Zimmermann S, Umstatter F, Leotta K, Mier W, Wink M.	Molecules	10.3390/molecules24162987	2019
	Characterization and Statistical Optimization of Enterobatin Synthesized by Escherichia coli OQ866153.	Khazaal MT, Faraag AHI, Hamada MA, El-Hendawy HH.	Biochem Genet	10.1007/s10528-023-10626-z	2024
	Draft genomes and initial characteriaztion of siderophore producing pseudomonads isolated from mine dump and mine drainage.	Hofmann M, Heine T, Schulz V, Hofmann S, Tischler D.	Biotechnol Rep (Amst)	10.1016/j.btre.2019.e00403	2020
	Sensitivity of Pseudomonas syringae to Bovine Lactoferrin Hydrolysates and Identification of a Novel Inhibitory Peptide.	Kim WS, Kim PH, Shimazaki K.	Korean J Food Sci Anim Resour	10.5851/kosfa.2016.36.4.487	2016
	Inhibitory Effects of Synthetic Peptides Containing Bovine Lactoferrin C-lobe Sequence on Bacterial Growth.	Kim WS, Ohashi M, Shimazaki K.	Korean J Food Sci Anim Resour	10.5851/kosfa.2016.36.4.452	2016
Enzymology	Microbial diversity similarities in periodontal pockets and atheromatous plaques of cardiovascular disease patients.	Serra e Silva Filho W, Casarin RC, Nicolela EL, Passos HM, Sallum AW, Goncalves RB.	PLoS One	10.1371/journal.pone.0109761	2014
Enzymology	Plant growth promoting and antifungal activity in endophytic Bacillus strains from pearl millet (Pennisetum glaucum).	Kushwaha P, Kashyap PL, Srivastava AK, Tiwari RK.	Braz J Microbiol	10.1007/s42770-019-00172-5	2020
Phylogeny	Isolation and characterization of fast-growing green snow bacteria from coastal East Antarctica.	Smirnova M, Miamin U, Kohler A, Valentovich L, Akhremchuk A, Sidarenka A, Dolgikh A, Shapaval V.	Microbiologyopen	10.1002/mbo3.1152	2021
Pathogenicity	Synergistic interaction between silver nanoparticles and membrane-permeabilizing antimicrobial peptides.	Ruden S, Hilpert K, Berditsch M, Wadhwani P, Ulrich AS.	Antimicrob Agents Chemother	10.1128/aac.01106-08	2009
Metabolism	A Natural Chimeric Pseudomonas Bacteriocin with Novel Pore-Forming Activity Parasitizes the Ferrichrome Transporter.	Ghequire MG, Kemland L, Anoz-Carbonell E, Buchanan SK, De Mot R.	mBio	10.1128/mbio.01961-16	2017
	Biotechnological screening of microalgal and cyanobacterial strains for biogas production and antibacterial and antifungal effects.	Mudimu O, Rybalka N, Bauersachs T, Born J, Friedl T, Schulz R.	Metabolites	10.3390/metabo4020373	2014
	Culture-Dependent Bioprospecting of Bacterial Isolates From the Canadian High Arctic Displaying Antibacterial Activity.	Marcolefas E, Leung T, Okshevsky M, McKay G, Hignett E, Hamel J, Aguirre G, Blenner-Hassett O, Boyle B, Levesque RC, Nguyen D, Gruenheid S, Whyte L.	Front Microbiol	10.3389/fmicb.2019.01836	2019
Enzymology	Comprehensive Laboratory Evaluation of a Specific Lateral Flow Assay for the Presumptive Identification of Francisella tularensis in Suspicious White Powders and Aerosol Samples.	Pillai SP, DePalma L, Prentice KW, Ramage JG, Chapman C, Sarwar J, Parameswaran N, Petersen J, Yockey B, Young J, Singh A, Pillai CA, Manickam G, Thirunavkkarasu N, Avila JR, Sharma S, Morse SA, Venkateswaran K, Anderson K, Hodge DR.	Health Secur	10.1089/hs.2019.0151	2020
Enzymology	Biochemical Characterization and Validation of a Catalytic Site of a Highly Thermostable Ts2631 Endolysin from the Thermus scotoductus Phage vB_Tsc2631.	Plotka M, Kaczorowska AK, Morzywolek A, Makowska J, Kozlowski LP, Thorisdottir A, Skirnisdottir S, Hjorleifsdottir S, Fridjonsson OH, Hreggvidsson GO, Kristjansson JK, Dabrowski S, Bujnicki JM, Kaczorowski T.	PLoS One	10.1371/journal.pone.0137374	2015
Enzymology	Comprehensive Laboratory Evaluation of a Lateral Flow Assay for the Detection of Yersinia pestis.	Prentice KW, DePalma L, Ramage JG, Sarwar J, Parameswaran N, Petersen J, Yockey B, Young J, Joshi M, Thirunavvukarasu N, Singh A, Chapman C, Avila JR, Pillai CA, Manickam G, Sharma SK, Morse SA, Venkateswaran KV, Anderson K, Hodge DR, Pillai SP.	Health Secur	10.1089/hs.2019.0094	2019
Enzymology	Novel highly thermostable endolysin from Thermus scotoductus MAT2119 bacteriophage Ph2119 with amino acid sequence similarity to eukaryotic peptidoglycan recognition proteins.	Plotka M, Kaczorowska AK, Stefanska A, Morzywolek A, Fridjonsson OH, Dunin-Horkawicz S, Kozlowski L, Hreggvidsson GO, Kristjansson JK, Dabrowski S, Bujnicki JM, Kaczorowski T.	Appl Environ Microbiol	10.1128/aem.03074-13	2014
Metabolism	Response of the wood-decay fungus Schizophyllum commune to co-occurring microorganisms.	Krause K, Jung EM, Lindner J, Hardiman I, Poetschner J, Madhavan S, Matthaus C, Kai M, Menezes RC, Popp J, Svatos A, Kothe E.	PLoS One	10.1371/journal.pone.0232145	2020
	Insect pathogenicity in plant-beneficial pseudomonads: phylogenetic distribution and comparative genomics.	Flury P, Aellen N, Ruffner B, Pechy-Tarr M, Fataar S, Metla Z, Dominguez-Ferreras A, Bloemberg G, Frey J, Goesmann A, Raaijmakers JM, Duffy B, Hofte M, Blom J, Smits TH, Keel C, Maurhofer M.	ISME J	10.1038/ismej.2016.5	2016
Metabolism	Production of fungal and bacterial growth modulating secondary metabolites is widespread among mycorrhiza-associated streptomycetes.	Schrey SD, Erkenbrack E, Fruh E, Fengler S, Hommel K, Horlacher N, Schulz D, Ecke M, Kulik A, Fiedler HP, Hampp R, Tarkka MT.	BMC Microbiol	10.1186/1471-2180-12-164	2012
Metabolism	Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics.	Nelkner J, Tejerizo GT, Hassa J, Lin TW, Witte J, Verwaaijen B, Winkler A, Bunk B, Sproer C, Overmann J, Grosch R, Puhler A, Schluter AA.	Genes (Basel)	10.3390/genes10080601	2019
Pathogenicity	The terpenes of leaves, pollen, and nectar of thyme (Thymus vulgaris) inhibit growth of bee disease-associated microbes.	Wiese N, Fischer J, Heidler J, Lewkowski O, Degenhardt J, Erler S.	Sci Rep	10.1038/s41598-018-32849-6	2018
Enzymology	Comprehensive Laboratory Evaluation of a Highly Specific Lateral Flow Assay for the Presumptive Identification of Bacillus anthracis Spores in Suspicious White Powders and Environmental Samples.	Ramage JG, Prentice KW, DePalma L, Venkateswaran KS, Chivukula S, Chapman C, Bell M, Datta S, Singh A, Hoffmaster A, Sarwar J, Parameswaran N, Joshi M, Thirunavkkarasu N, Krishnan V, Morse S, Avila JR, Sharma S, Estacio PL, Stanker L, Hodge DR, Pillai SP.	Health Secur	10.1089/hs.2016.0041	2016
Metabolism	Development of a flow-fluorescence in situ hybridization protocol for the analysis of microbial communities in anaerobic fermentation liquor.	Nettmann E, Frohling A, Heeg K, Klocke M, Schluter O, Mumme J.	BMC Microbiol	10.1186/1471-2180-13-278	2013
	Down syndrome cell adhesion molecule 1: testing for a role in insect immunity, behaviour and reproduction.	Peuss R, Wensing KU, Woestmann L, Eggert H, Milutinovic B, Sroka MG, Scharsack JP, Kurtz J, Armitage SA.	R Soc Open Sci	10.1098/rsos.160138	2016
Metabolism	Abundances and potential activities of nitrogen cycling microbial communities along a chronosequence of a glacier forefield.	Brankatschk R, Towe S, Kleineidam K, Schloter M, Zeyer J.	ISME J	10.1038/ismej.2010.184	2011
Phylogeny	Duplex quantitative real-time PCR assay for the detection and discrimination of the eggs of Toxocara canis and Toxocara cati (Nematoda, Ascaridoidea) in soil and fecal samples.	Durant JF, Irenge LM, Fogt-Wyrwas R, Dumont C, Doucet JP, Mignon B, Losson B, Gala JL.	Parasit Vectors	10.1186/1756-3305-5-288	2012
Enzymology	2-amino-3-(oxirane-2,3-dicarboxamido)-propanoyl-valine, an effective peptide antibiotic from the epiphyte Pantoea agglomerans 48b/90.	Sammer UF, Volksch B, Mollmann U, Schmidtke M, Spiteller P, Spiteller M, Spiteller D.	Appl Environ Microbiol	10.1128/aem.01244-09	2009
Metabolism	Degradation of poly(3-hydroxyoctanoic acid) [P(3HO)] by bacteria: purification and properties of a P(3HO) depolymerase from Pseudomonas fluorescens GK13.	Schirmer A, Jendrossek D, Schlegel HG.	Appl Environ Microbiol	10.1128/aem.59.4.1220-1227.1993	1993
Enzymology	Direct ribosome isolation from soil to extract bacterial rRNA for community analysis.	Felske A, Engelen B, Nubel U, Backhaus H.	Appl Environ Microbiol	10.1128/aem.62.11.4162-4167.1996	1996
	PCR-based preparation of 23S rRNA-targeted group-specific polynucleotide probes.	Ludwig W, Dorn S, Springer N, Kirchhof G, Schleifer KH.	Appl Environ Microbiol	10.1128/aem.60.9.3236-3244.1994	1994
Phylogeny	Quantification of 16S rRNAs in complex bacterial communities by multiple competitive reverse transcription-PCR in temperature gradient gel electrophoresis fingerprints.	Felske A, Akkermans AD, De Vos WM.	Appl Environ Microbiol	10.1128/aem.64.11.4581-4587.1998	1998
Metabolism	Evaluation of different approaches for identification of xenobiotic- degrading pseudomonads.	Busse H, El-Banna T, Auling G.	Appl Environ Microbiol	10.1128/aem.55.6.1578-1583.1989	1989
Metabolism	Synthesis of poly-3-hydroxyalkanoates is a common feature of fluorescent pseudomonads.	Huisman GW, de Leeuw O, Eggink G, Witholt B.	Appl Environ Microbiol	10.1128/aem.55.8.1949-1954.1989	1989
Metabolism	Purine utilization by Klebsiella oxytoca M5al: genes for ring-oxidizing and -opening enzymes.	Pope SD, Chen LL, Stewart V.	J Bacteriol	10.1128/jb.01281-08	2009
Metabolism	Auxofuran, a novel metabolite that stimulates the growth of fly agaric, is produced by the mycorrhiza helper bacterium Streptomyces strain AcH 505.	Riedlinger J, Schrey SD, Tarkka MT, Hampp R, Kapur M, Fiedler HP.	Appl Environ Microbiol	10.1128/aem.72.5.3550-3557.2006	2006
	Effect of primers hybridizing to different evolutionarily conserved regions of the small-subunit rRNA gene in PCR-based microbial community analyses and genetic profiling.	Schmalenberger A, Schwieger F, Tebbe CC.	Appl Environ Microbiol	10.1128/aem.67.8.3557-3563.2001	2001
	Application of antisera raised against sulfate-reducing bacteria for indirect immunofluorescent detection of immunoreactive bacteria in sediment from the German Baltic Sea.	Lillebaek R.	Appl Environ Microbiol	10.1128/aem.61.9.3436-3442.1995	1995
	Genomic and physiological characterization of Pseudomonas fluorescens RHBA17 reveals density-dependent growth modulation in potato through ROS/RNS-auxin signaling and carbon metabolic reprogramming.	Sun W, Luo C, Fu Y, Feng M, Liang H, Luo W, Leng F, Zhuang Y, Wang Y.	Plant Physiol Biochem	10.1016/j.plaphy.2025.110178	2025
	Inhibitory Effects of Nisin and Gallium (III) Nitrate Hydrate on Planktonic and Adhered Cells and Implications for the Viable but Non-Culturable State.	Poscente V, Di Gregorio L, Bernini R, Bevivino A.	Microorganisms	10.3390/microorganisms13020276	2025
	A Novel Sensitive Recombinase-Aided Amplification Integrated Test Strip for Pseudomonas fluorescens in Milk via Dual Gene Probes.	Zhang G, Zhang L, Ye J, Wang D, Lu Y.	Biosensors (Basel)	10.3390/bios15080553	2025
Biotechnology	Flow cytometry: Unravelling the real antimicrobial and antibiofilm efficacy of natural bioactive compounds.	Poscente V, Di Gregorio L, Costanzo M, Bernini R, Bevivino A.	J Microbiol Methods	10.1016/j.mimet.2024.106956	2024
	Evaluation of the antimicrobial mechanism of biogenic selenium nanoparticles against Pseudomonas fluorescens.	Xu Y, Zhang T, Che J, Yi J, Wei L, Li H.	Biofouling	10.1080/08927014.2023.2199932	2023
Phylogeny	Antitumor potentials of onco-microbial in Chinese patients with pancreatic cancer.	Gao YC, Zhou DD, Lu YB, Yang L, Gong XJ, Chen MY, Liang S, Huang WH, Zhang W.	Heliyon	10.1016/j.heliyon.2024.e40890	2024
	Isolation, characterization, and application of bacteriophage cocktails for the biocontrol of Pseudomonas fluorescens group strains in whole and skimmed milk.	Tayyarcan EK, Boyaci IH.	Braz J Microbiol	10.1007/s42770-023-01164-2	2023
	Use of Lactoperoxidase Inhibitory Effects to Extend the Shelf Life of Meat and Meat Products.	Beno F, Velkova A, Hruska F, Sevcik R.	Microorganisms	10.3390/microorganisms12051010	2024
	Total substitution and partial modification of the set of non-ribosomal peptide synthetases clusters lead to pyoverdine diversity in the Pseudomonas fluorescens complex.	Grana-Miraglia L, Geney Higuita JL, Salazar JC, Guaya Iniguez D, Alcolado Leon C, Garcia-Angulo VA.	Front Microbiol	10.3389/fmicb.2024.1421749	2024
Genetics	Genome Insights into Beneficial Microbial Strains Composing SIMBA Microbial Consortia Applied as Biofertilizers for Maize, Wheat and Tomato.	Cangioli L, Tabacchioni S, Visca A, Fiore A, Aprea G, Ambrosino P, Ercole E, Sorensen S, Mengoni A, Bevivino A.	Microorganisms	10.3390/microorganisms12122562	2024
	Dual-Temperature Microbiological Control of Cellular Products: A Potential Impact for Bacterial Screening of Platelet Concentrates?	Vollmer T, Knabbe C, Dreier J.	Microorganisms	10.3390/microorganisms11092350	2023
	Bactericidal efficacy of low dose gaseous ozone against clinically relevant multidrug-resistant bacteria.	Banerjee B, Thompson C, Nizet V, Bjanes E.	Front Microbiol	10.3389/fmicb.2024.1480433	2024
	Investigation of Phytochemical Composition, Antioxidant and Antibacterial Activity of Five Red Flower Extracts.	Popescu Stegarus DI, Botoran OR, Cristea RMI.	Antioxidants (Basel)	10.3390/antiox14020151	2025
	Lactiplantibacillus plantarum monolayer enhanced bactericidal action of carvacrol: biofilm inhibition of viable foodborne pathogens and spoilage microorganisms.	Poscente V, Di Gregorio L, Costanzo M, Nobili C, Bernini R, Garavaglia L, Bevivino A.	Front Microbiol	10.3389/fmicb.2023.1296608	2023
	Direct Discrimination and Growth Estimation of Foodborne Bacteria in Raw Meat Using Electronic Nose.	Goncalves WB, Teixeira WSR, Sampaio ANDCE, Martins OA, Cervantes EP, Mioni MSR, Gruber J, Pereira JG.	Microorganisms	10.3390/microorganisms12112250	2024
	Pseudomonas fluorescens group bacterial strains interact differently with pathogens during dual-species biofilm formation on stainless steel surfaces in milk.	Zarei M, Rahimi S, Saris PEJ, Yousefvand A.	Front Microbiol	10.3389/fmicb.2022.1053239	2022
	Establishment of a Sensitive and Visual Detection Platform for Viable Salmonella in Wastewater That Combines Propidium Monoazide with Recombinase Polymerase Amplification-CRISPR/Cas12a System.	Liang J, Sui X, Xu Y, Zheng X, Tan L.	Microorganisms	10.3390/microorganisms13051166	2025
Transcriptome	Transcriptome Reveals Regulation of Quorum Sensing of Hafnia alvei H4 on the Coculture System of Hafnia alvei H4 and Pseudomonas fluorescens ATCC13525.	Wang Y, Li X, Zhang G, Bi J, Hou H.	Foods	10.3390/foods13020336	2024
	Exploring the mechanisms and mode of action of bioactive compounds from marine Streptomyces albidoflavus against breast carcinoma cells.	Shata AM, Rejili MS, El-Naggar MM, El-Asser SA, Saleh AA, Hafez EE, Haouala F, Youssef AS.	BMC Biotechnol	10.1186/s12896-025-00991-5	2025
	Exploring the Antimicrobial Properties of 99 Natural Flavour and Fragrance Raw Materials against Pathogenic Bacteria: A Comparative Study with Antibiotics.	Bacinska Z, Baberowska K, Surowiak AK, Balcerzak L, Strub DJ.	Plants (Basel)	10.3390/plants12213777	2023
Genetics	The Microbiome of Catfish (Ictalurus punctatus) Treated with Natural Preservatives During Refrigerated Storage.	Lee JL, Yourek G.	Microorganisms	10.3390/microorganisms13020244	2025
	An Evaluation of the Sensitivity and Applicability of a Droplet Digital Polymerase Chain Reaction Assay to Simultaneously Detect Pseudomonas aeruginosa and Pseudomonas fragi in Foods.	Huang J, Zhai L, Wang J, Sun X, Wang B, Wei Z.	Foods	10.3390/foods13101453	2024
	Recent Advances Towards Selenium Nanoparticles: Synthetic Methods, Functional Mechanisms, and Biological Applications.	Geng L, Li L, Sun X, Cheng S, He J.	Foods	10.3390/foods14213640	2025
	Resistance to Plant Parasites in Tomato Is Induced by Soil Enrichment with Specific Bacterial and Fungal Rhizosphere Microbiome.	Molinari S, Leonetti P.	Int J Mol Sci	10.3390/ijms242015416	2023
	Differential Immunogenicity and Lung Disease-Inducing Potential of Mycobacterium immunogenum Genotypes and Impact of Co-Exposure with Pseudomonas: Optimizing a Mouse Model of Chronic Hypersensitivity Pneumonitis.	Johansson E, Yadav JS.	Int J Mol Sci	10.3390/ijms25042058	2024
Pathogenicity	Lactoferrin, Quercetin, and Hydroxyapatite Act Synergistically against Pseudomonas fluorescens.	Montone AMI, Papaianni M, Malvano F, Capuano F, Capparelli R, Albanese D.	Int J Mol Sci	10.3390/ijms22179247	2021
	Antibiotic Resistance Properties among Pseudomonas spp. Associated with Salmon Processing Environments.	Thomassen GMB, Reiche T, Tennfjord CE, Mehli L.	Microorganisms	10.3390/microorganisms10071420	2022
	Antibacterial activity of Lemna minor extracts against Pseudomonas fluorescens and safety evaluation in a zebrafish model.	Gonzalez-Renteria M, Del Carmen Monroy-Dosta M, Guzman-Garcia X, Hernandez-Calderas I, Ramos-Lopez YMA.	Saudi J Biol Sci	10.1016/j.sjbs.2020.09.043	2020
	EGCG as a therapeutic agent: a systematic review of recent advances and challenges in nanocarrier strategies.	Wong CN, Lim YM, Liew KB, Chew YL, Chua AL, Lee SK.	J Zhejiang Univ Sci B	10.1631/jzus.b2400040	2025
	Efficacy of biological agents and fillers seed coating in improving drought stress in anise.	Hoseini A, Salehi A, Sayyed RZ, Balouchi H, Moradi A, Piri R, Fazeli-Nasab B, Poczai P, Ansari MJ, Obaid SA, Datta R.	Front Plant Sci	10.3389/fpls.2022.955512	2022
	Dimethyl phthalate destroys the cell membrane structural integrity of Pseudomonas fluorescens.	Chen W, Guo R, Wang Z, Xu W, Hu Y.	Front Microbiol	10.3389/fmicb.2022.949590	2022
	Sonochemical-assisted method for efficient synthesis of Cu-MOF and evaluating its antibacterial properties.	Abaszadeh N, Afzali D, Sargazi G, Golpayegani A.	Heliyon	10.1016/j.heliyon.2024.e31024	2024
	Antimicrobial Activity of Honey and Propolis from Alba County, Romania.	Vica ML, Glevitzky M, Dumitrel GA, Popa M, Glevitzky I, Teodoru CA.	Antibiotics (Basel)	10.3390/antibiotics13100952	2024
Metabolism	Unexpected distribution of the 4-formylaminooxyvinylglycine (FVG) biosynthetic pathway in Pseudomonas and beyond.	Davis EW, Okrent RA, Manning VA, Trippe KM.	PLoS One	10.1371/journal.pone.0247348	2021
	Synergistic inhibition of Pseudomonas fluorescens growth and proteases activities via sodium chlorite-based oxyhalogen.	Abolmaaty A, Abdelkader RMM, Amin DH.	World J Microbiol Biotechnol	10.1007/s11274-022-03471-6	2022
	Characterization of soybean chitinase genes induced by rhizobacteria involved in the defense against Fusarium oxysporum.	Chen JY, Sang H, Chilvers MI, Wu CH, Chang HX.	Front Plant Sci	10.3389/fpls.2024.1341181	2024
	Single-Port Fluorescence Immunoassay for Concurrent Quantification of Live and Dead Bacteria: A Strategy Based on Extracellular Nucleases and DNase I.	Wang Y, Dong H, Yu H, Yuan S, Kawasaki H, Guo Y, Yao W.	Molecules	10.3390/molecules30061374	2025
	Impact of Growth Conditions on Pseudomonas fluorescens Morphology Characterized by Atomic Force Microscopy.	Kahli H, Beven L, Grauby-Heywang C, Debez N, Gammoudi I, Morote F, Sbartai H, Cohen-Bouhacina T.	Int J Mol Sci	10.3390/ijms23179579	2022
	Polyphenolic compounds in the combat of foodborne infections - An update on recent evidence.	Menikheim CB, Mousavi S, Bereswill S, Heimesaat MM.	Eur J Microbiol Immunol (Bp)	10.1556/1886.2024.00018	2024
	Comparative electrokinetic properties of extracellular vesicles produced by yeast and bacteria.	Rogers NMK, McCumber AW, McMillan HM, McNamara RP, Dittmer DP, Kuehn MJ, Hendren CO, Wiesner MR.	Colloids Surf B Biointerfaces	10.1016/j.colsurfb.2023.113249	2023
	The antibacterial activity of a photoactivatable diarylacetylene against Gram-positive bacteria.	Waite R, Adams CT, Chisholm DR, Sims CHC, Hughes JG, Dias E, White EA, Welsby K, Botchway SW, Whiting A, Sharples GJ, Ambler CA.	Front Microbiol	10.3389/fmicb.2023.1243818	2023
Pathogenicity	Fire Ant Venom Alkaloids Inhibit Biofilm Formation.	Carvalho DB, Fox EGP, Santos DGD, Sousa JS, Freire DMG, Nogueira FCS, Domont GB, Castilho LVA, Machado EA.	Toxins (Basel)	10.3390/toxins11070420	2019
	Interaction of Bdellovibrio bacteriovorus with Gram-Negative and Gram-Positive Bacteria in Dual Species and Polymicrobial Communities.	Waso-Reyneke M, Khan S, Khan W.	Microorganisms	10.3390/microorganisms10040793	2022
	Chemical composition and antibacterial activity of Eugenia brejoensis essential oil nanoemulsions against Pseudomonas fluorescens	Mendes JF, Martins HHA, Otoni CG, Santana NA, Silva RCS, Da Silva AG, Silva MV, Correia MTS, Machado G, Pinheiro ACM, Piccoli RH, Oliveira J.	Lebensm Wiss Technol	10.1016/j.lwt.2018.04.015	2018
	Proteomic Profiling Reveals Distinct Bacterial Extracellular Vesicle Subpopulations with Possibly Unique Functionality.	McMillan HM, Kuehn MJ.	Appl Environ Microbiol	10.1128/aem.01686-22	2023
	Antimicrobial Activity and Proposed Action Mechanism of Linalool Against Pseudomonas fluorescens.	Guo F, Chen Q, Liang Q, Zhang M, Chen W, Chen H, Yun Y, Zhong Q, Chen W.	Front Microbiol	10.3389/fmicb.2021.562094	2021
	Carvacrol-A Natural Phenolic Compound with Antimicrobial Properties.	Maczka W, Twardawska M, Grabarczyk M, Winska K.	Antibiotics (Basel)	10.3390/antibiotics12050824	2023
	Rapid, Low-Complexity, Simultaneous Bacterial Group Identification and Antimicrobial Susceptibility Testing Performed Directly on Positive Blood Culture Bottles Using Chromogenic Agar.	Robberts FJL, Owusu-Ofori A, Oduro G, Gyampomah TK, Marles N, Fox AT, Chenoweth JG, Schully KL, Clark DV.	Am J Trop Med Hyg	10.4269/ajtmh.22-0278	2022
	Pharmacological Studies on the Antidiabetic, Antioxidant, and Antimicrobial Efficacies of Commiphora myrrha Resin in Streptozotocin-Induced Diabetes in Rats: A Preclinical Study.	Mansouri RA, Ahmad A, Roushdy M M, Alshaibi HF, Ragab M.	J Diabetes Res	10.1155/2023/5478267	2023
	pH-taxis drives aerobic bacteria in duodenum to migrate into the pancreas with tumors.	Shirai H, Ito C, Tsukada K.	Sci Rep	10.1038/s41598-022-05554-8	2022
	Production and Characterization of Exopolysaccharide From Newly Isolated Marine Probiotic Lactiplantibacillus plantarum EI6 With in vitro Wound Healing Activity.	Zaghloul EH, Ibrahim MIA.	Front Microbiol	10.3389/fmicb.2022.903363	2022
	Antimicrobial activity of four essential oils against pigmenting Pseudomonas fluorescens and biofilmproducing Staphylococcus aureus of dairy origin.	Pedonese F, Fratini F, Pistelli L, Porta FM, Ciccio PD, Fischetti R, Turchi B, Nuvoloni R.	Ital J Food Saf	10.4081/ijfs.2017.6939	2017
	Non-Thermal Treatment Mediated by Curcumin for Enhancing Food Product Quality.	Wang Z, Yang H, Li Z, Liu J.	Foods	10.3390/foods13233980	2024
Enzymology	Isocitrate Lyase and Succinate Semialdehyde Dehydrogenase Mediate the Synthesis of alpha-Ketoglutarate in Pseudomonas fluorescens.	Alhasawi AA, Thomas SC, Tharmalingam S, Legendre F, Appanna VD.	Front Microbiol	10.3389/fmicb.2019.01929	2019
	Novel, Edible Melanin-Protein-Based Bioactive Films for Cheeses: Antimicrobial, Mechanical and Chemical Characteristics.	Ferraz AR, Goulao M, Santo CE, Anjos O, Serralheiro ML, Pintado CMBS.	Foods	10.3390/foods12091806	2023
	Characterizing the Transport and Surface Affinity of Extracellular Vesicles Isolated from Yeast and Bacteria in Well-Characterized Porous Media.	Rogers NMK, Hicks E, Kan C, Martin E, Gao L, Limso C, Hendren CO, Kuehn M, Wiesner MR.	Environ Sci Technol	10.1021/acs.est.3c03700	2023
Biotechnology	Survival and virulence of Acinetobacter baumannii in microbial mixtures.	Tayabali AF, Dirieh Y, Groulx E, Elfarawi N, Di Fruscio S, Melanson K, Moteshareie H, Al-Gafari M, Navarro M, Bernatchez S, Demissie Z, Anoop V.	BMC Microbiol	10.1186/s12866-024-03471-6	2024
	In vitro and in silico approaches to investigate antimicrobial and biofilm removal efficacies of combined ultrasonic and mild thermal treatment against Pseudomonas fluorescens.	Su Y, Jiang L, Chen D, Yu H, Yang F, Guo Y, Xie Y, Yao W.	Ultrason Sonochem	10.1016/j.ultsonch.2022.105930	2022
	Phyto-Inhibitory and Antimicrobial Activity of Brown Propolis from Romania.	Vica ML, Glevitzky M, Heghedus-Mindru RC, Dumitrel GA, Heghedus-Mindru G, Popa M, Faur DM, Balici S, Teodoru CA.	Antibiotics (Basel)	10.3390/antibiotics12061015	2023
	Characterization of Epigallocatechin-Gallate-Grafted Chitosan Nanoparticles and Evaluation of Their Antibacterial and Antioxidant Potential.	Moreno-Vasquez MJ, Plascencia-Jatomea M, Sanchez-Valdes S, Tanori-Cordova JC, Castillo-Yanez FJ, Quintero-Reyes IE, Graciano-Verdugo AZ.	Polymers (Basel)	10.3390/polym13091375	2021
	Protective Effect of Select Bacterial Species Representative of Fresh Produce on Human Norovirus Surrogates Exposed to Disinfecting Pulsed Light.	Peloquin L, Goetz C, Jubinville E, Jean J.	Appl Environ Microbiol	10.1128/aem.00043-23	2023
	A Metabolic Network Mediating the Cycling of Succinate, a Product of ROS Detoxification into alpha-Ketoglutarate, an Antioxidant.	Legendre F, MacLean A, Tharmalingam S, Appanna VD.	Antioxidants (Basel)	10.3390/antiox11030560	2022
	Architectural Features and Resistance to Food-Grade Disinfectants in Listeria monocytogenes-Pseudomonas spp. Dual-Species Biofilms.	Rodriguez-Lopez P, Rodriguez-Herrera JJ, Lopez Cabo M.	Front Microbiol	10.3389/fmicb.2022.917964	2022
	Bio-mining the forest ecosystem of North East India for identification of antimicrobial metabolites from fungi through submerged fermentation.	Devi SI, Lotjem H, Devi EJ, Potshangbam M, Ngashangva N, Bora J, Sahoo D, Sharma C.	Bioresour Technol	10.1016/j.biortech.2017.05.130	2017
	Effect of an Italian propolis on the growth of Listeria monocytogenes, Staphylococcus aureus and Bacillus cereus in milk and whey cheese.	Pedonese F, Verani G, Torracca B, Turchi B, Felicioli A, Nuvoloni R.	Ital J Food Saf	10.4081/ijfs.2019.8036	2019
Genetics	Genome Mining and Evaluation of the Biocontrol Potential of Pseudomonas fluorescens BRZ63, a New Endophyte of Oilseed Rape (Brassica napus L.) against Fungal Pathogens.	Chlebek D, Pinski A, Zur J, Michalska J, Hupert-Kocurek K.	Int J Mol Sci	10.3390/ijms21228740	2020
	Interactions Between Infectious Foodborne Viruses and Bacterial Biofilms Formed on Different Food Contact Surfaces.	Gagne MJ, Savard T, Brassard J.	Food Environ Virol	10.1007/s12560-022-09534-z	2022
	Phosphorus-solubilizing bacteria improve the growth of Nicotiana benthamiana on lunar regolith simulant by dissociating insoluble inorganic phosphorus.	Xia Y, Yuan Y, Li C, Sun Z.	Commun Biol	10.1038/s42003-023-05391-z	2023
Genetics	Whole-Genome Sequence of Lactococcus lactis Subsp. lactis LL16 Confirms Safety, Probiotic Potential, and Reveals Functional Traits.	Mileriene J, Aksomaitiene J, Kondrotiene K, Asledottir T, Vegarud GE, Serniene L, Malakauskas M.	Microorganisms	10.3390/microorganisms11041034	2023
	3D Optical Coherence Tomography image processing in BISCAP: characterization of biofilm structure and properties.	Narciso DAC, Pereira A, Dias NO, Monteiro M, Melo LF, Martins FG.	Bioinformatics	10.1093/bioinformatics/btae041	2024
Phylogeny	PCR-Independent Detection of Bacterial Species-Specific 16S rRNA at 10 fM by a Pore-Blockage Sensor.	Esfandiari L, Wang S, Wang S, Banda A, Lorenzini M, Kocharyan G, Monbouquette HG, Schmidt JJ.	Biosensors (Basel)	10.3390/bios6030037	2016
	Screening and identification of abiotic stress-responsive efficient antifungal Pseudomonas spp. from rice rhizospheric soil.	Karnwal A.	BioTechnologia (Pozn)	10.5114/bta.2021.103758	2021
	Effect of maize root exudates on indole-3-acetic acid production by rice endophytic bacteria under influence of L-tryptophan.	Karnwal A, Dohroo A.	F1000Res	10.12688/f1000research.13644.1	2018
	CO₂ Supercritical Fluid Extraction of Oleoresins from Sea Buckthorn Pomace: Evidence of Advanced Bioactive Profile and Selected Functionality.	Mihalcea L, Turturica M, Cucolea EI, Danila GM, Dumitrascu L, Coman G, Constantin OE, Grigore-Gurgu L, Stanciuc N.	Antioxidants (Basel)	10.3390/antiox10111681	2021
	Waste Orange Peels as a Source of Cellulose Nanocrystals and Their Use for the Development of Nanocomposite Films.	Bigi F, Maurizzi E, Haghighi H, Siesler HW, Licciardello F, Pulvirenti A.	Foods	10.3390/foods12050960	2023
	A new method for the rapid detection of the antibacterial and bacteriostatic activity of disinfectants based on Propidium Monoazide combined with real-time PCR.	Liu Y, Huang S, Zhou J, Zhang C, Hu F, Xiao Y, Qiu H, Yang Y.	Front Microbiol	10.3389/fmicb.2022.1051162	2022
	Pyridine Nucleotide Coenzyme Specificity of p-Hydroxybenzoate Hydroxylase and Related Flavoprotein Monooxygenases.	Westphal AH, Tischler D, Heinke F, Hofmann S, Groning JAD, Labudde D, van Berkel WJH.	Front Microbiol	10.3389/fmicb.2018.03050	2018
	Inhibition of Pathogenic Bacteria and Fungi by Natural Phenoxazinone from Octopus Ommochrome Pigments.	Lewis-Lujan LM, Rosas-Burgos EC, Ezquerra-Brauer JM, Burboa-Zazueta MG, Assanga SBI, Del Castillo-Castro T, Penton G, Plascencia-Jatomea M.	J Microbiol Biotechnol	10.4014/jmb.2206.06043	2022
Genetics	Genome-guided purification and characterization of polymyxin A1 from Paenibacillus thiaminolyticus SY20: A rarely explored member of polymyxins.	Wu YP, Liu DM, Liang MH, Huang YY, Lin J, Xiao LF.	Front Microbiol	10.3389/fmicb.2022.962507	2022
Biotechnology	Iron Chelation in Soil: Scalable Biotechnology for Accelerating Carbon Dioxide Removal by Enhanced Rock Weathering.	Epihov DZ, Banwart SA, McGrath SP, Martin DP, Steeley IL, Cobbold V, Kantola IB, Masters MD, DeLucia EH, Beerling DJ.	Environ Sci Technol	10.1021/acs.est.3c10146	2024
	Monitoring Growth and Removal of Pseudomonas Biofilms on Cellulose-Based Fabrics.	Agustin MDR, Stengel P, Kellermeier M, Tucking KS, Muller M.	Microorganisms	10.3390/microorganisms11040892	2023
Pathogenicity	Probiotic Potential of the Marine Isolate Enterococcus faecium EA9 and In Vivo Evaluation of Its Antisepsis Action in Rats.	Zaghloul EH, Abuohashish HM, El Sharkawy AS, Abbas EM, Ahmed MM, Al-Rejaie SS.	Mar Drugs	10.3390/md21010045	2023
	Effects of Electron Beam Radiation on the Phenolic Composition and Bioactive Properties of Olive Pomace Extracts.	Madureira J, Goncalves I, Cardoso J, Dias MI, Santos PMP, Margaca FMA, Santos-Buelga C, Barros L, Cabo Verde S.	Antioxidants (Basel)	10.3390/antiox13050558	2024
	A New Twist to the Kirby-Bauer Antibiotic Susceptibility Test Activity-Increasing Antibiotic Sensitivity of Pseudomonas fluorescens through Thermal Stress.	Gerbig DG, Engohang-Ndong J, Aubihl H.	J Microbiol Biol Educ	10.1128/jmbe.v14i2.617	2013
	An insight into the utilization of microbial biosurfactants pertaining to their industrial applications in the food sector.	Venkataraman S, Rajendran DS, Vaidyanathan VK.	Food Sci Biotechnol	10.1007/s10068-023-01435-6	2024
	Physical collection and viability of airborne bacteria collected under electrostatic field with different sampling media and protocols towards rapid detection.	Hong S, Kim MW, Jang J.	Sci Rep	10.1038/s41598-021-94033-7	2021
	Development of an active packaging system containing zinc oxide nanoparticles for the extension of chicken fillet shelf life.	Ahmadi A, Ahmadi P, Ehsani A.	Food Sci Nutr	10.1002/fsn3.1812	2020
	Chemical Characterization and Antimicrobial Properties of the Hydroalcoholic Solution of Echinacea purpurea (L.) Moench. and Propolis from Northern Italy.	Garzoli S, Maggio F, Vinciguerra V, Rossi C, Donadu MG, Serio A.	Molecules	10.3390/molecules28031380	2023
Genetics	Identification and specificity validation of unique and antimicrobial resistance genes to trace suspected pathogenic AMR bacteria and to monitor the development of AMR in non-AMR strains in the environment and clinical settings.	Rekadwad BN, Pramod N, Rao MPN, Hashem A, Avila-Quezada GD, Abd Allah EF.	Saudi J Biol Sci	10.1016/j.sjbs.2023.103869	2023
	Evaluation of Trichoderma spp., Pseudomonasfluorescens and Bacillus subtilis for biological control of Ralstonia wilt of tomato.	Yendyo S, G C R, Pandey BR.	F1000Res	10.12688/f1000research.12448.3	2017
	Inhibition of pathogenic and spoilage bacteria by a novel biofilm-forming Lactobacillus isolate: a potential host for the expression of heterologous proteins.	Jalilsood T, Baradaran A, Song AA, Foo HL, Mustafa S, Saad WZ, Yusoff K, Rahim RA.	Microb Cell Fact	10.1186/s12934-015-0283-8	2015
	Antimicrobial Activity of Olive Mill Wastewater Extract Against Pseudomonas Fluorescens Isolated from Mozzarella Cheese.	Roila R, Branciari R, Ranucci D, Ortenzi R, Urbani S, Servili M, Valiani A.	Ital J Food Saf	10.4081/ijfs.2016.5760	2016
Biotechnology	Validation of the Peel Plate Staphylococcus Aureus (SA) Test for Enumeration of S. aureus in Selected Foods and Non-Cultured Dairy Products: AOAC Performance Tested MethodSM 082401.	Salter RS, Durbin GW, Li S, Gilbert M, Crowley ES, Deterding A, Bastin B.	J AOAC Int	10.1093/jaoacint/qsae083	2025
	A Novel RAA Combined Test Strip Method Based on Dual Gene Targets for Pathogenic Vibrio vulnificus in Aquatic Products.	Liu W, Zhang G, Xu D, Ye J, Lu Y.	Foods	10.3390/foods12193605	2023
	Antimicrobial activities of commercial essential oils and their components against food-borne pathogens and food spoilage bacteria.	Mith H, Dure R, Delcenserie V, Zhiri A, Daube G, Clinquart A.	Food Sci Nutr	10.1002/fsn3.116	2014
	Liquid and Vapor Phase of Four Conifer-Derived Essential Oils: Comparison of Chemical Compositions and Antimicrobial and Antioxidant Properties.	Garzoli S, Masci VL, Caradonna V, Tiezzi A, Giacomello P, Ovidi E.	Pharmaceuticals (Basel)	10.3390/ph14020134	2021
	Microbial Community Establishment, Succession, and Temporal Dynamics in an Industrial Semi-Synthetic Metalworking Fluid Operation: A 50-Week Real-Time Tracking.	Kapoor R, Selvaraju SB, Subramanian V, Yadav JS.	Microorganisms	10.3390/microorganisms12020267	2024
	Protective plant immune responses are elicited by bacterial outer membrane vesicles.	McMillan HM, Zebell SG, Ristaino JB, Dong X, Kuehn MJ.	Cell Rep	10.1016/j.celrep.2020.108645	2021
	Chrysanthemum indicum and Chrysanthemum morifolium: Chemical Composition of Their Essential Oils and Their Potential Use as Natural Preservatives with Antimicrobial and Antioxidant Activities.	Youssef FS, Eid SY, Alshammari E, Ashour ML, Wink M, El-Readi MZ, El-Readi MZ.	Foods	10.3390/foods9101460	2020
	A Microfluidic-Based Investigation of Bacterial Attachment in Ureteral Stents.	De Grazia A, LuTheryn G, Meghdadi A, Mosayyebi A, Espinosa-Ortiz EJ, Gerlach R, Carugo D.	Micromachines (Basel)	10.3390/mi11040408	2020
	Modelling Growth and Decline in a Two-Species Model System: Pathogenic Escherichia coli O157:H7 and Psychrotrophic Spoilage Bacteria in Milk.	Quinto EJ, Marin JM, Caro I, Mateo J, Schaffner DW.	Foods	10.3390/foods9030331	2020
	Antimicrobial Carvacrol Incorporated in Flaxseed Gum-Sodium Alginate Active Films to Improve the Quality Attributes of Chinese Sea bass (Lateolabrax maculatus) during Cold Storage.	Fang S, Zhou Q, Hu Y, Liu F, Mei J, Xie J.	Molecules	10.3390/molecules24183292	2019
	Effects of NaCl on Antioxidant, Antifungal, and Antibacterial Activities in Safflower Essential Oils.	Attia H, Harrathi J, Alamer KH, Alsalmi FA, Magne C, Khalil M.	Plants (Basel)	10.3390/plants10122809	2021
	Copolymers enhance selective bacterial community colonization for potential root zone applications.	Pham VTH, Murugaraj P, Mathes F, Tan BK, Truong VK, Murphy DV, Mainwaring DE.	Sci Rep	10.1038/s41598-017-16253-0	2017
	Predictive modeling of Pseudomonas fluorescens growth under different temperature and pH values.	Goncalves LDDA, Piccoli RH, Peres AP, Saude AV.	Braz J Microbiol	10.1016/j.bjm.2016.12.006	2017
	Natural Compounds in the Battle against Microorganisms-Linalool.	Maczka W, Duda-Madej A, Grabarczyk M, Winska K.	Molecules	10.3390/molecules27206928	2022
	Novel Biodegradable Starch Film for Food Packaging with Antimicrobial Chicory Root Extract and Phytic Acid as a Cross-Linking Agent.	Jaskiewicz A, Budryn G, Nowak A, Efenberger-Szmechtyk M.	Foods	10.3390/foods9111696	2020
	The use of low-cost brewery waste product for the production of surfactin as a natural microbial biocide.	Nazareth TC, Zanutto CP, Tripathi L, Juma A, Maass D, de Souza AAU, de Arruda Guelli Ulson de Souza SM, Banat IM.	Biotechnol Rep (Amst)	10.1016/j.btre.2020.e00537	2020
	Growth of Serratia liquefaciens under 7 mbar, 0°C, and CO2-enriched anoxic atmospheres.	Schuerger AC, Ulrich R, Berry BJ, Nicholson WL.	Astrobiology	10.1089/ast.2011.0811	2013
Enzymology	Influence of the fixation/permeabilization step on peptide nucleic acid fluorescence in situ hybridization (PNA-FISH) for the detection of bacteria.	Rocha R, Almeida C, Azevedo NF.	PLoS One	10.1371/journal.pone.0196522	2018
Phylogeny	Antibiotic discovery throughout the Small World Initiative: A molecular strategy to identify biosynthetic gene clusters involved in antagonistic activity.	Davis E, Sloan T, Aurelius K, Barbour A, Bodey E, Clark B, Dennis C, Drown R, Fleming M, Humbert A, Glasgo E, Kerns T, Lingro K, McMillin M, Meyer A, Pope B, Stalevicz A, Steffen B, Steindl A, Williams C, Wimberley C, Zenas R, Butela K, Wildschutte H.	Microbiologyopen	10.1002/mbo3.435	2017
	Recovery of Antimicrobials and Bioaccessible Isoflavones and Phenolics from Soybean (Glycine max) Meal by Aqueous Extraction.	S Freitas C, Alves da Silva G, Perrone D, A Vericimo M, Dos S Baiao D, R Pereira P, M F Paschoalin V, M Del Aguila E.	Molecules	10.3390/molecules24010074	2018
	Selective Detection of Legionella pneumophila Serogroup 1 and 5 with a Digital Photocorrosion Biosensor Using Antimicrobial Peptide-Antibody Sandwich Strategy.	Islam MA, Hassen WM, Ishika I, Tayabali AF, Dubowski JJ.	Biosensors (Basel)	10.3390/bios12020105	2022
	Bioactivity and Chemical Profile of Rubus idaeus L. Leaves Steam-Distillation Extract.	De Santis D, Carbone K, Garzoli S, Laghezza Masci V, Turchetti G.	Foods	10.3390/foods11101455	2022
	Comparative Genomics and Physiological Characterization of Two Aerobic Spore Formers Isolated from Human Ileal Samples.	Saggese A, Giglio R, D'Anzi N, Baccigalupi L, Ricca E.	Int J Mol Sci	10.3390/ijms232314946	2022
	Metabolite-mediated modelling of microbial community dynamics captures emergent behaviour more effectively than species-species modelling.	Brunner JD, Chia N.	J R Soc Interface	10.1098/rsif.2019.0423	2019
	Effect of the Type VI Secretion System Secreted Protein Hcp on the Virulence of Aeromonas salmonicida.	Cai H, Yu J, Qiao Y, Ma Y, Zheng J, Lin M, Yan Q, Huang L.	Microorganisms	10.3390/microorganisms10122307	2022
	Stress-induced metabolic exchanges between complementary bacterial types underly a dynamic mechanism of inter-species stress resistance.	Amarnath K, Narla AV, Pontrelli S, Dong J, Reddan J, Taylor BR, Caglar T, Schwartzman J, Sauer U, Cordero OX, Hwa T.	Nat Commun	10.1038/s41467-023-38913-8	2023
	Rapid, Sensitive, and Selective Quantification of Bacillus cereus Spores Using xMAP Technology.	Moteshareie H, Hassen WM, Dirieh Y, Groulx E, Dubowski JJ, Tayabali AF.	Microorganisms	10.3390/microorganisms10071408	2022
Pathogenicity	Efflux as a glutaraldehyde resistance mechanism in Pseudomonas fluorescens and Pseudomonas aeruginosa biofilms.	Vikram A, Bomberger JM, Bibby KJ.	Antimicrob Agents Chemother	10.1128/aac.05152-14	2015
	Liposome Delivery of Nucleic Acids in Bacteria: Toward In Vivo Labeling of Human Microbiota.	Moreira L, Guimaraes NM, Pereira S, Santos RS, Loureiro JA, Pereira MC, Azevedo NF.	ACS Infect Dis	10.1021/acsinfecdis.1c00601	2022
	Aluminum-Immobilizing Rhizobacteria Modulate Root Exudation and Nutrient Uptake and Increase Aluminum Tolerance of Pea Mutant E107 (brz).	Belimov AA, Shaposhnikov AI, Azarova TS, Yuzikhin OS, Sekste EA, Safronova VI, Tikhonovich IA.	Plants (Basel)	10.3390/plants12122334	2023
	Antibacterial Regularity Mining Beneath the Systematic Activity Database of Lipopeptides Brevilaterins: An Instructive Activity Handbook for Its Food Application.	Liu Y, Han P, Jia Y, Chen Z, Li S, Ma A.	Foods	10.3390/foods11192991	2022
	Essential Oil of Algerian Eryngium campestre: Chemical Variability and Evaluation of Biological Activities.	Medbouhi A, Benbelaid F, Djabou N, Beaufay C, Bendahou M, Quetin-Leclercq J, Tintaru A, Costa J, Muselli A.	Molecules	10.3390/molecules24142575	2019
	Validation of MICA Legionella for Enumeration of Legionella pneumophila in Sanitary Waters and Cooling Tower Waters: AOAC Performance Tested MethodSM 032201.	Passot F, Peslier S, Benzinger MJ, Blackburn J, Thompson W, Bastin B, Dumont A, Dukan S.	J AOAC Int	10.1093/jaoacint/qsac150	2023
Genetics	The draft genome of Staphylococcus warneri TRPF4, a bacteriocin producer with potent activity against the causative agent of Legionnaires' Disease.	Freitas FS, Vidigal PMP, Siqueira TP, de Barros M, Totola MR.	3 Biotech	10.1007/s13205-020-02231-3	2020
Biotechnology	Antimicrobial Particle-Based Novel Sanitizer for Enhanced Decontamination of Fresh Produce.	Huang K, Nitin N.	Appl Environ Microbiol	10.1128/aem.02599-18	2019
	Monitoring bacterial biofilms with a microfluidic flow chip designed for imaging with white-light interferometry.	Brann M, Suter JD, Addleman RS, Larimer C.	Biomicrofluidics	10.1063/1.4985773	2017
	Phytochemical Composition, Antioxidant, and Antimicrobial Attributes of Different Solvent Extracts from Myrica esculenta Buch.-Ham. ex. D. Don Leaves.	Kabra A, Sharma R, Hano C, Kabra R, Martins N, Baghel US.	Biomolecules	10.3390/biom9080357	2019
Enzymology	Detection of food spoilage and pathogenic bacteria based on ligation detection reaction coupled to flow-through hybridization on membranes.	Bohme K, Cremonesi P, Severgnini M, Villa TG, Fernandez-No IC, Barros-Velazquez J, Castiglioni B, Calo-Mata P.	Biomed Res Int	10.1155/2014/156323	2014
	Short Ligand, Cysteine-Modified Warnericin RK Antimicrobial Peptides Favor Highly Sensitive Detection of Legionella pneumophila.	Islam MA, Hassen WM, Tayabali AF, Dubowski JJ.	ACS Omega	10.1021/acsomega.0c04753	2021
Phylogeny	Clear distinction between Burkholderia mallei and Burkholderia pseudomallei using fluorescent motB primers.	Schmoock G, Elschner M, Sprague LD.	Acta Vet Scand	10.1186/s13028-015-0104-4	2015
Metabolism	DdaR (PA1196) Regulates Expression of Dimethylarginine Dimethylaminohydrolase for the Metabolism of Methylarginines in Pseudomonas aeruginosa PAO1.	Lundgren BR, Bailey FJ, Moley G, Nomura CT.	J Bacteriol	10.1128/jb.00001-17	2017
	RNA detection with high specificity and sensitivity using nested fluorogenic Mango NASBA.	Abdolahzadeh A, Dolgosheina EV, Unrau PJ.	RNA	10.1261/rna.072629.119	2019
Pathogenicity	Unusual Flavones from Primula macrocalyx as Inhibitors of OAT1 and OAT3 and as Antifungal Agents against Candida rugosa.	Li X, Wang X, Li C, Khutsishvili M, Fayvush G, Atha D, Zhang Y, Borris RP.	Sci Rep	10.1038/s41598-019-45728-5	2019
	Skin-penetrating nematodes exhibit life-stage-specific interactions with host-associated and environmental bacteria.	Chavez IN, Brown TM, Assie A, Bryant AS, Samuel BS, Hallem EA.	BMC Biol	10.1186/s12915-021-01153-7	2021
	Opening Study on the Development of a New Biosensor for Metal Toxicity Based on Pseudomonas fluorescens Pyoverdine.	Chiado A, Varani L, Bosco F, Marmo L.	Biosensors (Basel)	10.3390/bios3040385	2013
	Spectroscopic, Thermal, Microbiological, and Antioxidant Study of Alkali Metal 2-Hydroxyphenylacetates.	Samsonowicz M, Golebiewska E, Wolejko E, Wydro U, Swiderski G, Zwolinska J, Kalinowska M, Lewandowski W.	Materials (Basel)	10.3390/ma14247824	2021
Pathogenicity	Inhibiting P. fluorescens biofilms with fluoropolymer-embedded silver nanoparticles: an in-situ spectroscopic study.	Sportelli MC, Tutuncu E, Picca RA, Valentini M, Valentini A, Kranz C, Mizaikoff B, Barth H, Cioffi N.	Sci Rep	10.1038/s41598-017-12088-x	2017
	Effects of Weak Acids on the Microbiological, Nutritional and Sensory Quality of Baltic Herring (Clupea harengus membras).	Logren N, Hiidenhovi J, Kakko T, Valimaa AL, Makinen S, Rintala N, Mattila P, Yang B, Hopia A.	Foods	10.3390/foods11121717	2022
	Guanidine-Containing Polyhydroxyl Macrolides: Chemistry, Biology, and Structure-Activity Relationship.	Song X, Yuan G, Li P, Cao S.	Molecules	10.3390/molecules24213913	2019
	Simultaneous detection of major blackleg and soft rot bacterial pathogens in potato by multiplex polymerase chain reaction.	Potrykus M, Sledz W, Golanowska M, Slawiak M, Binek A, Motyka A, Zoledowska S, Czajkowski R, Lojkowska E.	Ann Appl Biol	10.1111/aab.12156	2014
Metabolism	Ferric-pyoverdine recognition by Fpv outer membrane proteins of Pseudomonas protegens Pf-5.	Hartney SL, Mazurier S, Girard MK, Mehnaz S, Davis EW, Gross H, Lemanceau P, Loper JE.	J Bacteriol	10.1128/jb.01639-12	2013
	Fractionation of N2O isotopomers during production by denitrifier	Toyoda S, Mutobe H, Yamagishi H, Yoshida N, Tanji Y.	Soil Biol Biochem	10.1016/j.soilbio.2005.01.009	2005
Metabolism	Transfer and analysis of Salmonella pdu genes in a range of Gram-negative bacteria demonstrate exogenous microcompartment expression across a variety of species.	Graf L, Wu K, Wilson JW.	Microb Biotechnol	10.1111/1751-7915.12863	2018
	Application of ATP-based bioluminescence for bioaerosol quantification: effect of sampling method.	Han T, Wren M, DuBois K, Therkorn J, Mainelis G.	J Aerosol Sci	10.1016/j.jaerosci.2015.08.003	2015
	Rapid detection of Escherichia coli in beverages using genetically engineered bacteriophage T7.	Wisuthiphaet N, Yang X, Young GM, Nitin N.	AMB Express	10.1186/s13568-019-0776-7	2019
	Survival of Escherichia coli o157:h7 co-cultured with different levels of pseudomonas fluorescens and lactobacillus plantarum on fresh beef.	Tshabalala PA, de Kock HL, Buys EM.	Braz J Microbiol	10.1590/s1517-838220120004000023	2012
Metabolism	Modeling the differences in biochemical capabilities of pseudomonas species by flux balance analysis: how good are genome-scale metabolic networks at predicting the differences?	Babaei P, Ghasemi-Kahrizsangi T, Marashi SA.	ScientificWorldJournal	10.1155/2014/416289	2014
Pathogenicity	Susceptibility of Mycobacterium immunogenum and Pseudomonas fluorescens to formaldehyde and non-formaldehyde biocides in semi-synthetic metalworking fluids.	Selvaraju SB, Khan IU, Yadav JS.	Int J Mol Sci	10.3390/ijms12010725	2011
	Remote near infrared identification of pathogens with multiplexed nanosensors.	Nissler R, Bader O, Dohmen M, Walter SG, Noll C, Selvaggio G, Gross U, Kruss S.	Nat Commun	10.1038/s41467-020-19718-5	2020
Metabolism	The ferripyoverdine receptor FpvA of Pseudomonas aeruginosa PAO1 recognizes the ferripyoverdines of P. aeruginosa PAO1 and P. fluorescens ATCC 13525.	Meyer JM, Stintzi A, Poole K.	FEMS Microbiol Lett	10.1111/j.1574-6968.1999.tb13367.x	1999
	Antibacterial Effects of Cinnamon: From Farm to Food, Cosmetic and Pharmaceutical Industries.	Nabavi SF, Di Lorenzo A, Izadi M, Sobarzo-Sanchez E, Daglia M, Nabavi SM.	Nutrients	10.3390/nu7095359	2015
Metabolism	Artificial citrate operon confers mineral phosphate solubilization ability to diverse fluorescent pseudomonads.	Adhikary H, Sanghavi PB, Macwan SR, Archana G, Naresh Kumar G.	PLoS One	10.1371/journal.pone.0107554	2014
	Somatic antigens of pseudomonads: structure of the O-specific polysaccharide of the reference strain for Pseudomonas fluorescens (IMV 4125, ATCC 13525, biovar A).	Knirel YA, Zdorovenko GM, Paramonov NA, Veremeychenko SP, Toukach FV, Shashkov AS.	Carbohydr Res	10.1016/s0008-6215(96)00165-6	1996
	Pseudomonas fluorescens encodes the Crohn's disease-associated I2 sequence and T-cell superantigen.	Wei B, Huang T, Dalwadi H, Sutton CL, Bruckner D, Braun J.	Infect Immun	10.1128/iai.70.12.6567-6575.2002	2002
Metabolism	Isolation of Bdellovibrio sp. from soil samples in Mexico and their potential applications in control of pathogens.	Oyedara OO, De Luna-Santillana EJ, Olguin-Rodriguez O, Guo X, Mendoza-Villa MA, Menchaca-Arredondo JL, Elufisan TO, Garza-Hernandez JA, Garcia Leon I, Rodriguez-Perez MA.	Microbiologyopen	10.1002/mbo3.382	2016
Metabolism	The metabolic reprogramming evoked by nitrosative stress triggers the anaerobic utilization of citrate in Pseudomonas fluorescens.	Auger C, Lemire J, Cecchini D, Bignucolo A, Appanna VD.	PLoS One	10.1371/journal.pone.0028469	2011
Metabolism	Alpha-ketoglutarate dehydrogenase and glutamate dehydrogenase work in tandem to modulate the antioxidant alpha-ketoglutarate during oxidative stress in Pseudomonas fluorescens.	Mailloux RJ, Singh R, Brewer G, Auger C, Lemire J, Appanna VD.	J Bacteriol	10.1128/jb.00046-09	2009
	Rapid identification of Stenotrophomonas maltophilia by peptide nucleic acid fluorescence in situ hybridization.	Hansen N, Rasmussen AK, Fiandaca MJ, Kragh KN, Bjarnsholt T, Hoiby N, Stender H, Guardabassi L.	New Microbes New Infect	10.1002/nmi2.38	2014
	Propidium monoazide-quantitative polymerase chain reaction (PMA-qPCR) assay for rapid detection of viable and viable but non-culturable (VBNC) Pseudomonas aeruginosa in swimming pools.	Golpayegani A, Douraghi M, Rezaei F, Alimohammadi M, Nodehi RN.	J Environ Health Sci Eng	10.1007/s40201-019-00359-w	2019
	Phage-resistant Pseudomonas aeruginosa against a novel lytic phage JJ01 exhibits hypersensitivity to colistin and reduces biofilm production.	Wannasrichan W, Htoo HH, Suwansaeng R, Pogliano J, Nonejuie P, Chaikeeratisak V.	Front Microbiol	10.3389/fmicb.2022.1004733	2022
	Pseudomonas orientalis F9 Pyoverdine, Safracin, and Phenazine Mutants Remain Effective Antagonists against Erwinia amylovora in Apple Flowers.	Santos Kron A, Zengerer V, Bieri M, Dreyfuss V, Sostizzo T, Schmid M, Lutz M, Remus-Emsermann MNP, Pelludat C.	Appl Environ Microbiol	10.1128/aem.02620-19	2020
Metabolism	An ATP and oxalate generating variant tricarboxylic acid cycle counters aluminum toxicity in Pseudomonas fluorescens.	Singh R, Lemire J, Mailloux RJ, Chenier D, Hamel R, Appanna VD.	PLoS One	10.1371/journal.pone.0007344	2009
	Casbane diterpene as a promising natural antimicrobial agent against biofilm-associated infections.	Carneiro VA, Santos HS, Arruda FV, Bandeira PN, Albuquerque MR, Pereira MO, Henriques M, Cavada BS, Teixeira EH.	Molecules	10.3390/molecules16010190	2010
	Interspecies bacterial competition regulates community assembly in the C. elegans intestine.	Ortiz A, Vega NM, Ratzke C, Gore J.	ISME J	10.1038/s41396-021-00910-4	2021
	A comparison of the antimicrobial activity and toxicity of six combretum and two terminalia species from southern Africa.	Cock IE, Van Vuuren SF.	Pharmacogn Mag	10.4103/0973-1296.149740	2015
Pathogenicity	Biocidal activity of formaldehyde and nonformaldehyde biocides toward Mycobacterium immunogenum and Pseudomonas fluorescens in pure and mixed suspensions in synthetic metalworking fluid and saline.	Selvaraju SB, Khan IU, Yadav JS.	Appl Environ Microbiol	10.1128/aem.71.1.542-546.2005	2005
Pathogenicity	Inhibitory spectra and modes of antimicrobial action of gallotannins from mango kernels (Mangifera indica L.).	Engels C, Schieber A, Ganzle MG.	Appl Environ Microbiol	10.1128/aem.02521-10	2011
Genetics	Fast and Simple Analysis of MiSeq Amplicon Sequencing Data with MetaAmp.	Dong X, Kleiner M, Sharp CE, Thorson E, Li C, Liu D, Strous M.	Front Microbiol	10.3389/fmicb.2017.01461	2017
	Novel real-time PCR detection assay for Brucella suis.	Hansel C, Mertens K, Elschner MC, Melzer F.	Vet Rec Open	10.1136/vetreco-2014-000084	2015
	Pyoverdine, the Major Siderophore in Pseudomonas aeruginosa, Evades NGAL Recognition.	Peek ME, Bhatnagar A, McCarty NA, Zughaier SM.	Interdiscip Perspect Infect Dis	10.1155/2012/843509	2012
Phylogeny	A marine sulfate-reducing bacterium producing multiple antibiotics: biological and chemical investigation.	Zhang Y, Mu J, Gu X, Zhao C, Wang X, Xie Z.	Mar Drugs	10.3390/md7030341	2009
Metabolism	Tin-carbon cleavage of organotin compounds by pyoverdine from Pseudomonas chlororaphis.	Inoue H, Takimura O, Kawaguchi K, Nitoda T, Fuse H, Murakami K, Yamaoka Y.	Appl Environ Microbiol	10.1128/aem.69.2.878-883.2003	2003
Phylogeny	Application of siderotyping for characterization of Pseudomonas tolaasii and "Pseudomonas reactans" isolates associated with brown blotch disease of cultivated mushrooms.	Munsch P, Geoffroy VA, Alatossava T, Meyer JM.	Appl Environ Microbiol	10.1128/aem.66.11.4834-4841.2000	2000
	Suspended Materials in River Waters Differentially Enrich Class 1 Integron- and IncP-1 Plasmid-Carrying Bacteria in Sediments.	De la Cruz Barron M, Merlin C, Guilloteau H, Montarges-Pelletier E, Bellanger X.	Front Microbiol	10.3389/fmicb.2018.01443	2018
Pathogenicity	Small-molecule inhibition of choline catabolism in Pseudomonas aeruginosa and other aerobic choline-catabolizing bacteria.	Fitzsimmons LF, Flemer S, Wurthmann AS, Deker PB, Sarkar IN, Wargo MJ.	Appl Environ Microbiol	10.1128/aem.00504-11	2011
	Comparison of resistance to microbial contamination of conventional and modified water dispensers	Eckner KF.	J Food Prot		1992
Metabolism	Broad-spectrum antimicrobial epiphytic and endophytic fungi from marine organisms: isolation, bioassay and taxonomy.	Zhang Y, Mu J, Feng Y, Kang Y, Zhang J, Gu PJ, Wang Y, Ma LF, Zhu YH.	Mar Drugs	10.3390/md7020097	2009
Metabolism	Oxidative stress evokes a metabolic adaptation that favors increased NADPH synthesis and decreased NADH production in Pseudomonas fluorescens.	Singh R, Mailloux RJ, Puiseux-Dao S, Appanna VD.	J Bacteriol	10.1128/jb.00555-07	2007
	A novel strategy involved in [corrected] anti-oxidative defense: the conversion of NADH into NADPH by a metabolic network.	Singh R, Lemire J, Mailloux RJ, Appanna VD.	PLoS One	10.1371/journal.pone.0002682	2008
Metabolism	Enhanced reliability and accuracy for field deployable bioforensic detection and discrimination of Xylella fastidiosa subsp. pauca, causal agent of citrus variegated chlorosis using razor ex technology and TaqMan quantitative PCR.	Ouyang P, Arif M, Fletcher J, Melcher U, Ochoa Corona FM.	PLoS One	10.1371/journal.pone.0081647	2013
Enzymology	Development of a single-tube, cell lysis-based, genus-specific PCR method for rapid identification of mycobacteria: optimization of cell lysis, PCR primers and conditions, and restriction pattern analysis.	Khan IU, Yadav JS.	J Clin Microbiol	10.1128/jcm.42.1.453-457.2004	2004
	Purification of Pyoverdines of Pseudomonas fluorescens 2-79 by Copper-Chelate Chromatography.	Xiao R, Kisaalita WS.	Appl Environ Microbiol	10.1128/aem.61.11.3769-3774.1995	1995
	Outbreak of Pseudomonas fluorescens bacteremia among oncology patients.	Hsueh PR, Teng LJ, Pan HJ, Chen YC, Sun CC, Ho SW, Luh KT.	J Clin Microbiol	10.1128/jcm.36.10.2914-2917.1998	1998
	Antimicrobial TiO₂ nanocomposite coatings for surfaces, dental and orthopaedic implants.	Kumaravel V, Nair KM, Mathew S, Bartlett J, Kennedy JE, Manning HG, Whelan BJ, Leyland NS, Pillai SC.	Chem Eng J	10.1016/j.cej.2021.129071	2021
Metabolism	Towards Fluorescence In Vivo Hybridization (FIVH) Detection of H. pylori in Gastric Mucosa Using Advanced LNA Probes.	Fontenete S, Leite M, Guimaraes N, Madureira P, Ferreira RM, Figueiredo C, Wengel J, Azevedo NF.	PLoS One	10.1371/journal.pone.0125494	2015
Metabolism	Spatial and temporal variation of phenanthrene-degrading bacteria in intertidal sediments.	Berardesco G, Dyhrman S, Gallagher E, Shiaris MP.	Appl Environ Microbiol	10.1128/aem.64.7.2560-2565.1998	1998
Genetics	Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).	Tighe S, Afshinnekoo E, Rock TM, McGrath K, Alexander N, McIntyre A, Ahsanuddin S, Bezdan D, Green SJ, Joye S, Stewart Johnson S, Baldwin DA, Bivens N, Ajami N, Carmical JR, Herriott IC, Colwell R, Donia M, Foox J, Greenfield N, Hunter T, Hoffman J, Hyman J, Jorgensen E, Krawczyk D, Lee J, Levy S, Garcia-Reyero N, Settles M, Thomas K, Gomez F, Schriml L, Kyrpides N, Zaikova E, Penterman J, Mason CE.	J Biomol Tech	10.7171/jbt.17-2801-004	2017
Enzymology	Quantitative detection of Listeria monocytogenes in biofilms by real-time PCR.	Guilbaud M, de Coppet P, Bourion F, Rachman C, Prevost H, Dousset X.	Appl Environ Microbiol	10.1128/aem.71.4.2190-2194.2005	2005
Enzymology	Rapid identification of Yersinia enterocolitica in blood by the 5' nuclease PCR assay.	Sen K.	J Clin Microbiol	10.1128/jcm.38.5.1953-1958.2000	2000
Metabolism	Siderophore typing, a powerful tool for the identification of fluorescent and nonfluorescent pseudomonads.	Meyer JM, Geoffroy VA, Baida N, Gardan L, Izard D, Lemanceau P, Achouak W, Palleroni NJ.	Appl Environ Microbiol	10.1128/aem.68.6.2745-2753.2002	2002
	ANCHOR: a 16S rRNA gene amplicon pipeline for microbial analysis of multiple environmental samples.	Gonzalez E, Pitre FE, Brereton NJB.	Environ Microbiol	10.1111/1462-2920.14632	2019
	Culturing oil sands microbes as mixed species communities enhances ex situ model naphthenic acid degradation.	Demeter MA, Lemire JA, Yue G, Ceri H, Turner RJ.	Front Microbiol	10.3389/fmicb.2015.00936	2015
Phylogeny	Species-specific PCR as a tool for the identification of Burkholderia gladioli.	Whitby PW, Pope LC, Carter KB, LiPuma JJ, Stull TL.	J Clin Microbiol	10.1128/jcm.38.1.282-285.2000	2000
Enzymology	Development of quantitative real-time PCR assays for detection and quantification of surrogate biological warfare agents in building debris and leachate.	Saikaly PE, Barlaz MA, de Los Reyes FL.	Appl Environ Microbiol	10.1128/aem.00779-07	2007
Metabolism	Interplay of different transporters in the mediation of divalent heavy metal resistance in Pseudomonas putida KT2440.	Leedjarv A, Ivask A, Virta M.	J Bacteriol	10.1128/jb.01494-07	2008
Metabolism	Lead precipitation by Vibrio harveyi: evidence for novel quorum-sensing interactions.	Mire CE, Tourjee JA, O'Brien WF, Ramanujachary KV, Hecht GB.	Appl Environ Microbiol	10.1128/aem.70.2.855-864.2004	2004
Enzymology	Shieh medium supplemented with tobramycin for selective isolation of Flavobacterium columnare (Flexibacter columnaris) from diseased fish.	Decostere A, Haesebrouck F, Devriese LA.	J Clin Microbiol	10.1128/jcm.35.1.322-324.1997	1997
Metabolism	Diversity of cultivated endophytic bacteria from sugarcane: genetic and biochemical characterization of Burkholderia cepacia complex isolates.	Mendes R, Pizzirani-Kleiner AA, Araujo WL, Raaijmakers JM.	Appl Environ Microbiol	10.1128/aem.01222-07	2007
Enzymology	Rapid detection, identification, and enumeration of Escherichia coli cells in municipal water by chemiluminescent in situ hybridization.	Stender H, Broomer AJ, Oliveira K, Perry-O'Keefe H, Hyldig-Nielsen JJ, Sage A, Coull J.	Appl Environ Microbiol	10.1128/aem.67.1.142-147.2001	2001
Enzymology	Multipurpose assessment for the quantification of Vibrio spp. and total bacteria in fish and seawater using multiplex real-time polymerase chain reaction.	Kim JY, Lee JL.	J Sci Food Agric	10.1002/jsfa.6699	2014
Enzymology	PCR detection of a newly emerged pandemic Vibrio parahaemolyticus O3:K6 pathogen in pure cultures and seeded waters from the Gulf of Mexico.	Myers ML, Panicker G, Bej AK.	Appl Environ Microbiol	10.1128/aem.69.4.2194-2200.2003	2003
Pathogenicity	Survival of subsurface microorganisms exposed to UV radiation and hydrogen peroxide.	Arrage AA, Phelps TJ, Benoit RE, White DC.	Appl Environ Microbiol	10.1128/aem.59.11.3545-3550.1993	1993
	Development of amplified fragment length polymorphism-derived functional strain-specific markers to assess the persistence of 10 bacterial strains in soil microcosms.	Xiang SR, Cook M, Saucier S, Gillespie P, Socha R, Scroggins R, Beaudette LA.	Appl Environ Microbiol	10.1128/aem.00574-10	2010
Phylogeny	Development of a PCR assay for identification of staphylococci at genus and species levels.	Martineau F, Picard FJ, Ke D, Paradis S, Roy PH, Ouellette M, Bergeron MG.	J Clin Microbiol	10.1128/jcm.39.7.2541-2547.2001	2001
Metabolism	Energization of glucose transport by Pseudomonas fluorescens.	Romano AH, Voytek A, Bruskin AM.	J Bacteriol	10.1128/jb.142.3.755-762.1980	1980
Metabolism	Degradation of triglycerides by a pseudomonad isolated from milk: molecular analysis of a lipase-encoding gene and its expression in Escherichia coli.	Johnson LA, Beacham IR, MacRae IC, Free ML.	Appl Environ Microbiol	10.1128/aem.58.5.1776-1779.1992	1992
Metabolism	Cellular choline and glycine betaine pools impact osmoprotection and phospholipase C production in Pseudomonas aeruginosa.	Fitzsimmons LF, Hampel KJ, Wargo MJ.	J Bacteriol	10.1128/jb.00596-12	2012
Metabolism	Activity and three-dimensional distribution of toluene-degrading Pseudomonas putida in a multispecies biofilm assessed by quantitative in situ hybridization and scanning confocal laser microscopy.	Moller S, Pedersen AR, Poulsen LK, Arvin E, Molin S.	Appl Environ Microbiol	10.1128/aem.62.12.4632-4640.1996	1996
	Seasonal population changes and characterization of ice-nucleating bacteria in farm fields of central alberta.	Kaneda T.	Appl Environ Microbiol	10.1128/aem.52.1.173-178.1986	1986
Enzymology	Use of a marker organism to model the spread of central nervous system tissue in cattle and the abattoir environment during commercial stunning and carcass dressing.	Daly DJ, Prendergast DM, Sheridan JJ, Blair IS, McDowell DA.	Appl Environ Microbiol	10.1128/aem.68.2.791-798.2002	2002
	Sequences of the 5S rRNAs of Azotobacter vinelandii, Pseudomonas aeruginosa and Pseudomonas fluorescens with some notes on 5S RNA secondary structure.	Dams E, Vandenberghe A, De Wachter R.	Nucleic Acids Res	10.1093/nar/11.5.1245	1983
Enzymology	Use of tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species.	Picard FJ, Ke D, Boudreau DK, Boissinot M, Huletsky A, Richard D, Ouellette M, Roy PH, Bergeron MG.	J Clin Microbiol	10.1128/jcm.42.8.3686-3695.2004	2004
Metabolism	Effect of temperature on mineralization by heterotrophic bacteria.	Tison DL, Pope DH.	Appl Environ Microbiol	10.1128/aem.39.3.584-587.1980	1980
	A highly selective PCR protocol for detecting 16S rRNA genes of the genus Pseudomonas (sensu stricto) in environmental samples.	Widmer F, Seidler RJ, Gillevet PM, Watrud LS, Di Giovanni GD.	Appl Environ Microbiol	10.1128/aem.64.7.2545-2553.1998	1998
	The use of microscopy and three-dimensional visualization to evaluate the structure of microbial biofilms cultivated in the Calgary Biofilm Device.	Harrison JJ, Ceri H, Yerly J, Stremick CA, Hu Y, Martinuzzi R, Turner RJ.	Biol Proced Online	10.1251/bpo127	2006
Metabolism	A pair of regulatory isozymes for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase is conserved within group I pseudomonads.	Byng GS, Berry A, Jensen RA.	J Bacteriol	10.1128/jb.156.1.429-433.1983	1983
Metabolism	Brochocin-C, a new bacteriocin produced by Brochothrix campestris.	Siragusa GR, Cutter CN.	Appl Environ Microbiol	10.1128/aem.59.7.2326-2328.1993	1993
	Pentaplexed quantitative real-time PCR assay for the simultaneous detection and quantification of botulinum neurotoxin-producing clostridia in food and clinical samples.	Kirchner S, Kramer KM, Schulze M, Pauly D, Jacob D, Gessler F, Nitsche A, Dorner BG, Dorner MB.	Appl Environ Microbiol	10.1128/aem.02490-09	2010
	Survival and phospholipid Fatty Acid profiles of surface and subsurface bacteria in natural sediment microcosms.	Kieft TL, Wilch E, O'connor K, Ringelberg DB, White DC.	Appl Environ Microbiol	10.1128/aem.63.4.1531-1542.1997	1997
	Development of a PCR assay for rapid detection of enterococci.	Ke D, Picard FJ, Martineau F, Menard C, Roy PH, Ouellette M, Bergeron MG.	J Clin Microbiol	10.1128/jcm.37.11.3497-3503.1999	1999
Pathogenicity	Conservation of the multidrug resistance efflux gene oprM in Pseudomonas aeruginosa.	Bianco N, Neshat S, Poole K.	Antimicrob Agents Chemother	10.1128/aac.41.4.853	1997
Biotechnology	Hydroxyapatite adherence as a means to concentrate bacteria.	Berry ED, Siragusa GR.	Appl Environ Microbiol	10.1128/aem.63.10.4069-4074.1997	1997
Enzymology	Incidence and identification of Pseudomonas fluorescens and Pseudomonas putida in the clinical laboratory.	Blazevic DJ, Koepcke MH, Matsen JM.	Appl Microbiol	10.1128/am.25.1.107-110.1973	1973
	Effect of impact stress on microbial recovery on an agar surface.	Stewart SL, Grinshpun SA, Willeke K, Terzieva S, Ulevicius V, Donnelly J.	Appl Environ Microbiol	10.1128/aem.61.4.1232-1239.1995	1995
Enzymology	Monoclonal antibodies against Pseudomonas aeruginosa outer membrane antigens: isolation and characterization.	Hancock RE, Wieczorek AA, Mutharia LM, Poole K.	Infect Immun	10.1128/iai.37.1.166-171.1982	1982
Pathogenicity	New real-time PCR assay for rapid detection of methicillin-resistant Staphylococcus aureus directly from specimens containing a mixture of staphylococci.	Huletsky A, Giroux R, Rossbach V, Gagnon M, Vaillancourt M, Bernier M, Gagnon F, Truchon K, Bastien M, Picard FJ, van Belkum A, Ouellette M, Roy PH, Bergeron MG.	J Clin Microbiol	10.1128/jcm.42.5.1875-1884.2004	2004
Enzymology	Immunological and structural relatedness of catabolic ornithine carbamoyltransferases and the anabolic enzymes of enterobacteria.	Falmagne P, Portetelle D, Stalon V.	J Bacteriol	10.1128/jb.161.2.714-719.1985	1985
	Biological suppression of potato ring rot by fluorescent pseudomonads.	de la Cruz AR, Poplawsky AR, Wiese MV.	Appl Environ Microbiol	10.1128/aem.58.6.1986-1991.1992	1992
Metabolism	Conformational heterogeneity of the copper binding site in azurin. A time-resolved fluorescence study.	Szabo AG, Stepanik TM, Wayner DM, Young NM.	Biophys J	10.1016/s0006-3495(83)84433-6	1983
Metabolism	Protein synthesis at 680 atm: is it related to environmental origin, physiological type, or taxonomic group?	Pope DH, Smith WP, Orgrinic MA, Landau JV.	Appl Environ Microbiol	10.1128/aem.31.6.1001-1002.1976	1976
Enzymology	Identification and detection of Stenotrophomonas maltophilia by rRNA-directed PCR.	Whitby PW, Carter KB, Burns JL, Royall JA, LiPuma JJ, Stull TL.	J Clin Microbiol	10.1128/jcm.38.12.4305-4309.2000	2000
	Pyoverdin is essential for virulence of Pseudomonas aeruginosa.	Meyer JM, Neely A, Stintzi A, Georges C, Holder IA.	Infect Immun	10.1128/iai.64.2.518-523.1996	1996
	Anti-infective properties of bacteriocins: an update.	Hammami R, Fernandez B, Lacroix C, Fliss I.	Cell Mol Life Sci	10.1007/s00018-012-1202-3	2013
Pathogenicity	Antibacterial activity of tropilidine and tropone.	Trust TJ, Bartlett KH.	Antimicrob Agents Chemother	10.1128/aac.8.3.381	1975
	Monoclonal Antibodies to Ferric Pseudobactin, the Siderophore of Plant Growth-Promoting Pseudomonas putida B10.	Buyer JS, Sikora LJ, Kratzke MG.	Appl Environ Microbiol	10.1128/aem.56.2.419-424.1990	1990
Metabolism	Production and comparison of peptide siderophores from strains of distantly related pathovars of Pseudomonas syringae and Pseudomonas viridiflava LMG 2352.	Bultreys A, Gheysen I.	Appl Environ Microbiol	10.1128/aem.66.1.325-331.2000	2000
Metabolism	Headspace analysis of volatile metabolites of Pseudomonas aeruginosa and related species by gas chromatography-mass spectrometry.	Labows JN, McGinley KJ, Webster GF, Leyden JJ.	J Clin Microbiol	10.1128/jcm.12.4.521-526.1980	1980
	Effect of Two Plant Species, Flax (Linum usitatissinum L.) and Tomato (Lycopersicon esculentum Mill.), on the Diversity of Soilborne Populations of Fluorescent Pseudomonads.	Lemanceau P, Corberand T, Gardan L, Latour X, Laguerre G, Boeufgras J, Alabouvette C.	Appl Environ Microbiol	10.1128/aem.61.3.1004-1012.1995	1995
Metabolism	Nonliquid reagent for detecting nitrate reduction.	Lampe AS.	J Clin Microbiol	10.1128/jcm.14.4.452-454.1981	1981
	Sterility of salmonid roe and practicality of hatching gnotobiotic salmonid fish.	Trust TJ.	Appl Microbiol	10.1128/am.28.3.340-341.1974	1974
Enzymology	Use of a simplified cell blot technique and 16S rRNA-directed probes for identification of common environmental isolates.	Braun-Howland EB, Vescio PA, Nierzwicki-Bauer SA.	Appl Environ Microbiol	10.1128/aem.59.10.3219-3224.1993	1993
Metabolism	Changes in denitrifier abundance, denitrification gene mRNA levels, nitrous oxide emissions, and denitrification in anoxic soil microcosms amended with glucose and plant residues.	Henderson SL, Dandie CE, Patten CL, Zebarth BJ, Burton DL, Trevors JT, Goyer C.	Appl Environ Microbiol	10.1128/aem.02993-09	2010
Enzymology	Detection of Helicobacter pylori in stomach tissue by use of a monoclonal antibody.	Husson MO, Leclerc H.	J Clin Microbiol	10.1128/jcm.29.12.2831-2834.1991	1991
	Surface balance study of the interaction between microorganisms and lipid monolayer at the air/water interface.	Kjelleberg S, Norkrans B, Lofgren H, Larsson K.	Appl Environ Microbiol	10.1128/aem.31.4.609-611.1976	1976
Enzymology	Microbial diversity in ultra-high-pressure rocks and fluids from the Chinese Continental Scientific Drilling Project in China.	Zhang G, Dong H, Xu Z, Zhao D, Zhang C.	Appl Environ Microbiol	10.1128/aem.71.6.3213-3227.2005	2005
Metabolism	Evidence for natural horizontal transfer of the pcpB gene in the evolution of polychlorophenol-degrading sphingomonads.	Tiirola MA, Wang H, Paulin L, Kulomaa MS.	Appl Environ Microbiol	10.1128/aem.68.9.4495-4501.2002	2002
	Development of a vital fluorescent staining method for monitoring bacterial transport in subsurface environments.	Fuller ME, Streger SH, Rothmel RK, Mailloux BJ, Hall JA, Onstott TC, Fredrickson JK, Balkwill DL, DeFlaun MF.	Appl Environ Microbiol	10.1128/aem.66.10.4486-4496.2000	2000
Metabolism	Gluconate regulation of glucose catabolism in Pseudomonas fluorescens.	Quay SC, Friedman SB, Eisenberg RC.	J Bacteriol	10.1128/jb.112.1.291-298.1972	1972
Metabolism	Carbohydrate metabolism in the mosquito pathogen Bacillus sphaericus 2362.	Russell BL, Jelley SA, Yousten AA.	Appl Environ Microbiol	10.1128/aem.55.2.294-297.1989	1989
	Modified medium for the oxidation-fermentation test in the identification of marine bacteria.	Lemos ML, Toranzo AE, Barja JL.	Appl Environ Microbiol	10.1128/aem.49.6.1541-1543.1985	1985
Pathogenicity	Foam separation of Pseudomonas fluorescens and Bacillus subtilis var. niger.	Grieves RB, Wang SL.	Appl Microbiol	10.1128/am.15.1.76-81.1967	1967
Phylogeny	Evaluation of the Biolog automated microbial identification system.	Klingler JM, Stowe RP, Obenhuber DC, Groves TO, Mishra SK, Pierson DL.	Appl Environ Microbiol	10.1128/aem.58.6.2089-2092.1992	1992
Pathogenicity	Antibacterial activity of tropolone.	Trust TJ.	Antimicrob Agents Chemother	10.1128/aac.7.5.500	1975
	Cloning and nucleotide sequence of the pvdA gene encoding the pyoverdin biosynthetic enzyme L-ornithine N5-oxygenase in Pseudomonas aeruginosa.	Visca P, Ciervo A, Orsi N.	J Bacteriol	10.1128/jb.176.4.1128-1140.1994	1994
Metabolism	Effects of low temperature on in vivo and in vitro protein synthesis in Escherichia coli and Pseudomonas fluorescens.	Broeze RJ, Solomon CJ, Pope DH.	J Bacteriol	10.1128/jb.134.3.861-874.1978	1978
Biotechnology	Detection of Salmonella spp. in oysters by PCR.	Bej AK, Mahbubani MH, Boyce MJ, Atlas RM.	Appl Environ Microbiol	10.1128/aem.60.1.368-373.1994	1994
Enzymology	Effects of growth medium, inoculum size, and incubation time on culturability and isolation of soil bacteria.	Davis KE, Joseph SJ, Janssen PH.	Appl Environ Microbiol	10.1128/aem.71.2.826-834.2005	2005
	Distribution of alginate gene sequences in the Pseudomonas rRNA homology group I-Azomonas-Azotobacter lineage of superfamily B procaryotes.	Fialho AM, Zielinski NA, Fett WF, Chakrabarty AM, Berry A.	Appl Environ Microbiol	10.1128/aem.56.2.436-443.1990	1990
	Dual staining of natural bacterioplankton with 4',6-diamidino-2-phenylindole and fluorescent oligonucleotide probes targeting kingdom-level 16S rRNA sequences.	Hicks RE, Amann RI, Stahl DA.	Appl Environ Microbiol	10.1128/aem.58.7.2158-2163.1992	1992
Pathogenicity	New Perspectives on the Use of Phytochemicals as an Emergent Strategy to Control Bacterial Infections Including Biofilms.	Borges A, Abreu AC, Dias C, Saavedra MJ, Borges F, Simoes M.	Molecules	10.3390/molecules21070877	2016
Enzymology	Detection of Pseudomonas aeruginosa from clinical and environmental samples by amplification of the exotoxin A gene using PCR.	Khan AA, Cerniglia CE.	Appl Environ Microbiol	10.1128/aem.60.10.3739-3745.1994	1994
	Natural cinnamic acids, synthetic derivatives and hybrids with antimicrobial activity.	Guzman JD.	Molecules	10.3390/molecules191219292	2014
	Characterization of Pyoverdin(pss), the Fluorescent Siderophore Produced by Pseudomonas syringae pv. syringae.	Cody YS, Gross DC.	Appl Environ Microbiol	10.1128/aem.53.5.928-934.1987	1987
Metabolism	Pseudomonas aeruginosa mutants affected in anaerobic growth on arginine: evidence for a four-gene cluster encoding the arginine deiminase pathway.	Vander Wauven C, Pierard A, Kley-Raymann M, Haas D.	J Bacteriol	10.1128/jb.160.3.928-934.1984	1984
Enzymology	Purification and characterization of an antibacterial substance produced by a marine Alteromonas species.	Barja JL, Lemos ML, Toranzo AE.	Antimicrob Agents Chemother	10.1128/aac.33.10.1674	1989
	Psychrotolerant bacteria isolated from arctic soil that degrade polychlorinated biphenyls at low temperatures	Master ER, Mohn WW.	Appl Environ Microbiol	10.1128/aem.64.12.4823-4829.1998	1998
	Transfer and Expression of the Catabolic Plasmid pBRC60 in Wild Bacterial Recipients in a Freshwater Ecosystem.	Fulthorpe RR, Wyndham RC.	Appl Environ Microbiol	10.1128/aem.57.5.1546-1553.1991	1991
	A diffusion gradient chamber for studying microbial behavior and separating microorganisms.	Emerson D, Worden RM, Breznak JA.	Appl Environ Microbiol	10.1128/aem.60.4.1269-1278.1994	1994
Metabolism	Siderophore-mediated iron uptake in Alcaligenes eutrophus CH34 and identification of aleB encoding the ferric iron-alcaligin E receptor.	Gilis A, Khan MA, Cornelis P, Meyer JM, Mergeay M, van der Lelie D.	J Bacteriol	10.1128/jb.178.18.5499-5507.1996	1996
Metabolism	Gluconate metabolism in Escherichia coli.	Eisenberg RC, Dobrogosz WJ.	J Bacteriol	10.1128/jb.93.3.941-949.1967	1967
	Characterization of bdellocysts of Bdellovibrio sp.	Tudor JJ, Conti SF.	J Bacteriol	10.1128/jb.131.1.314-322.1977	1977
	Identification of transposable elements which activate gene expression in Pseudomonas cepacia.	Scordilis GE, Ree H, Lessie TG.	J Bacteriol	10.1128/jb.169.1.8-13.1987	1987
	Surface localization of Pseudomonas aeruginosa outer membrane porin protein F by using monoclonal antibodies.	Mutharia LM, Hancock RE.	Infect Immun	10.1128/iai.42.3.1027-1033.1983	1983
	Evaluation of aquarium antibiotic formulations.	Trust TJ, Chipman DC.	Antimicrob Agents Chemother	10.1128/aac.6.4.379	1974
Phylogeny	New naphthalene-degrading marine Pseudomonas strains.	Garcia-Valdes E, Cozar E, Rotger R, Lalucat J, Ursing J.	Appl Environ Microbiol	10.1128/aem.54.10.2478-2485.1988	1988
	Monoclonal antibodies specific for Escherichia coli J5 lipopolysaccharide: cross-reaction with other gram-negative bacterial species.	Mutharia LM, Crockford G, Bogard WC, Hancock RE.	Infect Immun	10.1128/iai.45.3.631-636.1984	1984
	Compilation of 5S rRNA and 5S rRNA gene sequences.	Specht T, Wolters J, Erdmann VA.	Nucleic Acids Res	10.1093/nar/18.suppl.2215	1990
Enzymology	The superoxide dismutase gene, a target for detection and identification of mycobacteria by PCR.	Zolg JW, Philippi-Schulz S.	J Clin Microbiol	10.1128/jcm.32.11.2801-2812.1994	1994
Metabolism	Biosynthesis and metabolism of arginine in bacteria.	Cunin R, Glansdorff N, Pierard A, Stalon V.	Microbiol Rev	10.1128/mr.50.3.314-352.1986	1986
Biotechnology	Comparison of fecal coliform agar and violet red bile lactose agar for fecal coliform enumeration in foods.	Leclercq A, Wanegue C, Baylac P.	Appl Environ Microbiol	10.1128/aem.68.4.1631-1638.2002	2002
Cultivation	A simple diagnostic milk medium for Pseudomonas aeruginosa.	Brown MR, Foster JH.	J Clin Pathol	10.1136/jcp.23.2.172	1970
Biotechnology	Comparison of the inactivation of seven foodborne pathogens and spoilage bacteria under 405 nm blue light treatment in liquid media and on solid surfaces.	Hur M, Diez-Gonzalez F.	Microbiol Spectr	10.1128/spectrum.00093-25	2025
	Characterization of biofilm production by Pseudomonas fluorescens isolated from refrigerated raw buffalo milk.	Lauer Cruz K, de Souza da Motta A.	J Food Sci Technol	10.1007/s13197-019-03924-1	2019
Pathogenicity	A cellular defense memory imprinted by early life toxic stress.	Gecse E, Gilanyi B, Csaba M, Hajdu G, Soti C.	Sci Rep	10.1038/s41598-019-55198-4	2019
Enzymology	A disclosure gel for visual detection of live Bacillus anthracis spores.	Robinson CV, Bishop AH.	J Appl Microbiol	10.1111/jam.14226	2019
	The antibacterial effect of whey protein-alginate coating incorporated with the lactoperoxidase system on chicken thigh meat.	Molayi R, Ehsani A, Yousefi M.	Food Sci Nutr	10.1002/fsn3.634	2018
	Bioactive Properties of Syzygium cumini (L.) Skeels Pulp and Seed Phenolic Extracts.	Santos CA, Almeida FA, Quecan BXV, Pereira PAP, Gandra KMB, Cunha LR, Pinto UM.	Front Microbiol	10.3389/fmicb.2020.00990	2020
	Identification of RNase 8 as a novel human antimicrobial protein.	Rudolph B, Podschun R, Sahly H, Schubert S, Schroder JM, Harder J.	Antimicrob Agents Chemother	10.1128/aac.00246-06	2006
Pathogenicity	Burkholderia is highly resistant to human Beta-defensin 3.	Sahly H, Schubert S, Harder J, Rautenberg P, Ullmann U, Schroder J, Podschun R.	Antimicrob Agents Chemother	10.1128/aac.47.5.1739-1741.2003	2003
Enzymology	Development of two real-time multiplex PCR assays for the detection and quantification of eight key bacterial pathogens in lower respiratory tract infections.	Gadsby NJ, McHugh MP, Russell CD, Mark H, Conway Morris A, Laurenson IF, Hill AT, Templeton KE.	Clin Microbiol Infect	10.1016/j.cmi.2015.05.004	2015
	A quantitative PCR (TaqMan) assay for pathogenic Leptospira spp.	Smythe LD, Smith IL, Smith GA, Dohnt MF, Symonds ML, Barnett LJ, McKay DB.	BMC Infect Dis	10.1186/1471-2334-2-13	2002
Metabolism	Nisin stimulates oxygen consumption by Staphylococcus aureus and Escherichia coli.	Carneiro de Melo AM, Cook GM, Miles RJ, Poole RK.	Appl Environ Microbiol	10.1128/aem.62.5.1831-1834.1996	1996
	Transfer and occurrence of large mercury resistance plasmids in river epilithon.	Bale MJ, Fry JC, Day MJ.	Appl Environ Microbiol	10.1128/aem.54.4.972-978.1988	1988
Phylogeny	Identification of Gram-negative non-fermenters and oxidase-positive fermenters by the Oxi/Ferm tube.	Holmes B, Dowling J, Lapage SP.	J Clin Pathol	10.1136/jcp.32.1.78	1979
	Penetration of Bdellovibrio bacteriovorus into host cells.	Abram D, Castro e Melo J, Chou D.	J Bacteriol	10.1128/jb.118.2.663-680.1974	1974
	Effect of the Application of a Green Preservative Strategy on Minced Meat Products: Antimicrobial Efficacy of Olive Mill Wastewater Polyphenolic Extract in Improving Beef Burger Shelf-Life.	Roila R, Sordini B, Esposto S, Ranucci D, Primavilla S, Valiani A, Taticchi A, Branciari R, Servili M.	Foods	10.3390/foods11162447	2022
Enzymology	Sensitive and specific detection of Yersinia pseudotuberculosis by loop-mediated isothermal amplification.	Horisaka T, Fujita K, Iwata T, Nakadai A, Okatani AT, Horikita T, Taniguchi T, Honda E, Yokomizo Y, Hayashidani H.	J Clin Microbiol	10.1128/jcm.42.11.5349-5352.2004	2004
Phylogeny	New PCR-based open reading frame typing method for easy, rapid, and reliable identification of Acinetobacter baumannii international epidemic clones without performing multilocus sequence typing.	Suzuki M, Hosoba E, Matsui M, Arakawa Y.	J Clin Microbiol	10.1128/jcm.01064-14	2014
	Transglutaminase Cross-Linked and Lysozyme-Incorporated Antimicrobial Tilapia Collagen Edible Films: Development and Characterization.	Hou BY, Wang BJ, Weng YM.	Foods	10.3390/foods12071475	2023
	Antibacterial Activity of Chitosan-Polylactate Fabricated Plastic Film and Its Application on the Preservation of Fish Fillet.	Chang SH, Chen YJ, Tseng HJ, Hsiao HI, Chai HJ, Shang KC, Pan CL, Tsai GJ.	Polymers (Basel)	10.3390/polym13050696	2021
	Cryptophytes as potential source of natural antimicrobials for food preservation.	Abidizadegan M, Peltomaa E, Ilina P, Tammela P, Blomster J.	Front Microbiol	10.3389/fmicb.2024.1462696	2024
	Complete Genome Sequence of the Antibiotic-Resistant Pseudomonas fluorescens Strain Ant01, from the Rhizosphere of Antarctic Moss.	Hwang J, Lee H, Do H, Lee SG, Oh TJ, Lee JH.	Microbiol Resour Announc	10.1128/mra.01057-22	2023
	Potential of halotolerant PGPRs in growth and yield augmentation of Triticum aestivum var. HD2687 and Zea mays var. PSCL4642 cultivars under saline conditions.	Karnwal A.	BioTechnologia (Pozn)	10.5114/bta.2022.120703	2022
	Effect of cultivation medium on some physicochemical parameters of outer bacterial membrane.	Horska E, Pokorny J, Labajova M.	Microbios		1995
	Removal of Zn(II) and Ag(I) by Staphylococcus epidermidis CECT 4183 and Biosynthesis of ZnO and Ag/AgCl Nanoparticles for Biocidal Applications.	Munoz AJ, Martin C, Espinola F, Moya M, Ruiz E.	Toxics	10.3390/toxics13060478	2025
	First European Erwinia amylovora Lytic Bacteriophage Cocktails Effective in the Host: Characterization and Prospects for Fire Blight Biocontrol.	Biosca EG, Delgado Santander R, Moran F, Figas-Segura A, Vazquez R, Catala-Senent JF, Alvarez B.	Biology (Basel)	10.3390/biology13030176	2024
	Antimicrobial Effect of Simira ecuadorensis Extracts and Their Impact on Improving Shelf Life in Chicken and Fish Products.	Reyes JF, Diez AM, Melero B, Rovira J, Jaime I.	Foods	10.3390/foods11152352	2022
	Ethnopharmacology, Phytochemistry, and Pharmacological Properties of Thymus satureioides Coss.	El Hachlafi N, Chebat A, Fikri-Benbrahim K.	Evid Based Complement Alternat Med	10.1155/2021/6673838	2021
	Whole-Genome Sequence and Classification of 11 Endophytic Bacteria from Poison Ivy (Toxicodendron radicans).	Tran PN, Tan NE, Lee YP, Gan HM, Polter SJ, Dailey LK, Hudson AO, Savka MA.	Genome Announc	10.1128/genomea.01319-15	2015
Biotechnology	Analysis of the variability in the number of viable bacteria after mild heat treatment of food.	Aguirre JS, Pin C, Rodriguez MR, Garcia de Fernando GD.	Appl Environ Microbiol	10.1128/aem.00452-09	2009
Pathogenicity	The Biological Activities of Oleocanthal from a Molecular Perspective.	Pang KL, Chin KY.	Nutrients	10.3390/nu10050570	2018
Biotechnology	PCR for detection of Shigella spp. in mayonnaise.	Villalobo E, Torres A.	Appl Environ Microbiol	10.1128/aem.64.4.1242-1245.1998	1998
Enzymology	Innovative Approaches Using Lichen Enriched Media to Improve Isolation and Culturability of Lichen Associated Bacteria.	Biosca EG, Flores R, Santander RD, Diez-Gil JL, Barreno E.	PLoS One	10.1371/journal.pone.0160328	2016
Enzymology	Development of a PCR assay for detection of Yersinia ruckeri in tissues of inoculated and naturally infected trout.	Gibello A, Blanco MM, Moreno MA, Cutuli MT, Domenech A, Dominguez L, Fernandez-Garayzabal JF.	Appl Environ Microbiol	10.1128/aem.65.1.346-350.1999	1999
	Antioxidant Activity of Myrtus communis L. and Myrtus nivellei Batt. & Trab. Extracts: A Brief Review.	Hennia A, Miguel MG, Nemmiche S.	Medicines (Basel)	10.3390/medicines5030089	2018
	Probe-free label system for rapid detection of Cronobacter genus in powdered infant formula.	Fu S, Jiang Y, Jiang X, Zhao Y, Chen S, Yang X, Man C.	AMB Express	10.1186/s13568-018-0689-x	2018
	Involvement of RpoN in Regulating Motility, Biofilm, Resistance, and Spoilage Potential of Pseudomonas fluorescens.	Liu X, Ye Y, Zhu Y, Wang L, Yuan L, Zhu J, Sun A.	Front Microbiol	10.3389/fmicb.2021.641844	2021
Metabolism	Lactococcus lactis Diversity Revealed by Targeted Amplicon Sequencing of purR Gene, Metabolic Comparisons and Antimicrobial Properties in an Undefined Mixed Starter Culture Used for Soft-Cheese Manufacture.	Saltaji S, Rue O, Sopena V, Sable S, Tambadou F, Didelot S, Chevrot R.	Foods	10.3390/foods9050622	2020
Metabolism	In situ monitoring of the nascent Pseudomonas fluorescens biofilm response to variations in the dissolved organic carbon level in low-nutrient water by attenuated total reflectance-Fourier transform infrared spectroscopy.	Delille A, Quiles F, Humbert F.	Appl Environ Microbiol	10.1128/aem.00838-07	2007
Enzymology	Mur-LH, the broad-spectrum endolysin of Lactobacillus helveticus temperate bacteriophage phi-0303.	Deutsch SM, Guezenec S, Piot M, Foster S, Lortal S.	Appl Environ Microbiol	10.1128/aem.70.1.96-103.2004	2004
	Exploring Endophytic Bacteria from Artemisia spp. and Beneficial Traits on Pea Plants.	Hadian S, Smith DL, Kopriva S, Norkeviciene E, Suproniene S.	Plants (Basel)	10.3390/plants13121684	2024
	Enterobacter sp. DBA51 produces ACC deaminase and promotes the growth of tomato (Solanum lycopersicum L.) and tobacco (Nicotiana tabacum L.) plants under greenhouse condition.	Ortega-Ortega Y, Sarmiento-Lopez LG, Baylon-Palomino A, Vazquez-Lee J, Maldonado-Bonilla LD, Flores-Olivas A, Valenzuela-Soto JH.	Curr Res Microb Sci	10.1016/j.crmicr.2023.100207	2024
	The Rhizobacterium Bacillus amyloliquefaciens MHR24 Has Biocontrol Ability Against Fungal Phytopathogens and Promotes Growth in Arabidopsis thaliana.	Hernandez-Rodriguez M, Jasso-de Rodriguez D, Hernandez-Castillo FD, Moggio I, Arias E, Valenzuela-Soto JH, Flores-Olivas A.	Microorganisms	10.3390/microorganisms12112380	2024
Phylogeny	Detection of Methylobacterium species by 16S rRNA gene-targeted PCR.	Nishio T, Yoshikura T, Itoh H.	Appl Environ Microbiol	10.1128/aem.63.4.1594-1597.1997	1997
	Antimicrobial Activity of Lactoferrin-Related Peptides and Applications in Human and Veterinary Medicine.	Bruni N, Capucchio MT, Biasibetti E, Pessione E, Cirrincione S, Giraudo L, Corona A, Dosio F.	Molecules	10.3390/molecules21060752	2016
Enzymology	Cloning and nucleotide sequence of the gyrB gene of Vibrio parahaemolyticus and its application in detection of this pathogen in shrimp.	Venkateswaran K, Dohmoto N, Harayama S.	Appl Environ Microbiol	10.1128/aem.64.2.681-687.1998	1998
Biotechnology	Comparison of a fluorogenic assay with a conventional method for rapid detection of Vibrio parahaemolyticus in seafoods.	Venkateswaran K, Kurusu T, Satake M, Shinoda S.	Appl Environ Microbiol	10.1128/aem.62.9.3516-3520.1996	1996
	Organic solvent-tolerant bacterium which secretes an organic solvent-stable proteolytic enzyme.	Ogino H, Yasui K, Shiotani T, Ishihara T, Ishikawa H.	Appl Environ Microbiol	10.1128/aem.61.12.4258-4262.1995	1995
Metabolism	LlpB represents a second subclass of lectin-like bacteriocins.	Ghequire MGK, De Mot R.	Microb Biotechnol	10.1111/1751-7915.13373	2019
	Pilot market surveillance of GMM contaminations in alpha-amylase food enzyme products: A detection strategy strengthened by a newly developed qPCR method targeting a GM Bacillus licheniformis producing alpha-amylase.	Fraiture MA, Gobbo A, Guillitte C, Marchesi U, Verginelli D, De Greve J, D'aes J, Vanneste K, Papazova N, Roosens NHC.	Food Chem (Oxf)	10.1016/j.fochms.2023.100186	2024
Metabolism	Hitting with a BAM: Selective Killing by Lectin-Like Bacteriocins.	Ghequire MGK, Swings T, Michiels J, Buchanan SK, De Mot R.	mBio	10.1128/mbio.02138-17	2018
Metabolism	Different Ancestries of R Tailocins in Rhizospheric Pseudomonas Isolates.	Ghequire MG, Dillen Y, Lambrichts I, Proost P, Wattiez R, De Mot R.	Genome Biol Evol	10.1093/gbe/evv184	2015
Metabolism	Novel lectin-like bacteriocins of biocontrol strain Pseudomonas fluorescens Pf-5.	Parret AH, Temmerman K, De Mot R.	Appl Environ Microbiol	10.1128/aem.71.9.5197-5207.2005	2005
Metabolism	Structural determinants for activity and specificity of the bacterial toxin LlpA.	Ghequire MG, Garcia-Pino A, Lebbe EK, Spaepen S, Loris R, De Mot R.	PLoS Pathog	10.1371/journal.ppat.1003199	2013
Metabolism	High-performance liquid chromatography analyses of pyoverdin siderophores differentiate among phytopathogenic fluorescent Pseudomonas Species.	Bultreys A, Gheysen I, Wathelet B, Maraite H, de Hoffmann E.	Appl Environ Microbiol	10.1128/aem.69.2.1143-1153.2003	2003
	Wild gut microbiome suppresses the potentially opportunistic pathogen Aeromonas in medaka under domesticated rearing conditions.	Kawano K, Kawabe K, Sano Y, Hori T, Kihara M, Kikuchi Y, Itoh H.	Anim Microbiome	10.1186/s42523-025-00462-4	2025
	Strategies for combating plant salinity stress: the potential of plant growth-promoting microorganisms.	Acharya BR, Gill SP, Kaundal A, Sandhu D.	Front Plant Sci	10.3389/fpls.2024.1406913	2024
	Evolution and Functional Diversification of Serine Racemase Homologs in Bacteria.	Uda K, Nishimura R, Li Y, Shimoda E, Miyamoto T, Moe LA.	J Mol Evol	10.1007/s00239-024-10231-7	2025
	Flavoprotein monooxygenases for oxidative biocatalysis: recombinant expression in microbial hosts and applications.	Ceccoli RD, Bianchi DA, Rial DV.	Front Microbiol	10.3389/fmicb.2014.00025	2014
Metabolism	From protein engineering to immobilization: promising strategies for the upgrade of industrial enzymes.	Singh RK, Tiwari MK, Singh R, Lee JK.	Int J Mol Sci	10.3390/ijms14011232	2013
	Mechanism of antimicrobial activity of honeybee (Apis mellifera) venom on Gram-negative bacteria: Escherichia coli and Pseudomonas spp.	Haktanir I, Masoura M, Mantzouridou FT, Gkatzionis K.	AMB Express	10.1186/s13568-021-01214-8	2021
	The Use of Porous Silica Particles as Carriers for a Smart Delivery of Antimicrobial Essential Oils in Food Applications.	Sullivan DJ, O'Mahony TF, Cruz-Romero MC, Cummins E, Kerry JP, Morris MA.	ACS Omega	10.1021/acsomega.1c03549	2021
Pathogenicity	Altering the composition of caseicins A and B as a means of determining the contribution of specific residues to antimicrobial activity.	Norberg S, O'Connor PM, Stanton C, Ross RP, Hill C, Fitzgerald GF, Cotter PD.	Appl Environ Microbiol	10.1128/aem.02450-10	2011
Pathogenicity	Extensive manipulation of caseicins A and B highlights the tolerance of these antimicrobial peptides to change.	Norberg S, O'Connor PM, Stanton C, Ross RP, Hill C, Fitzgerald GF, Cotter PD.	Appl Environ Microbiol	10.1128/aem.07312-11	2012
	Bioactivity of Hydrolysates Obtained from Chicken Egg Ovalbumin Using Artichoke (Cynara scolymus L.) Proteases.	Bueno-Gavila E, Abellan A, Giron-Rodriguez F, Cayuela JM, Tejada L.	Foods	10.3390/foods10020246	2021
Genetics	Characterisation and genome sequence of the lytic Acinetobacter baumannii bacteriophage vB_AbaS_Loki.	Turner D, Wand ME, Briers Y, Lavigne R, Sutton JM, Reynolds DM.	PLoS One	10.1371/journal.pone.0172303	2017
Genetics	Biofilm and Pathogenesis-Related Proteins in the Foodborne P. fluorescens ITEM 17298 With Distinctive Phenotypes During Cold Storage.	Quintieri L, Fanelli F, Zuhlke D, Caputo L, Logrieco AF, Albrecht D, Riedel K.	Front Microbiol	10.3389/fmicb.2020.00991	2020
	Antimicrobial and Antibiofilm Activities of Citrus Water-Extracts Obtained by Microwave-Assisted and Conventional Methods.	Caputo L, Quintieri L, Cavalluzzi MM, Lentini G, Habtemariam S.	Biomedicines	10.3390/biomedicines6020070	2018
Genetics	Plant growth promotion and pathogen protection by the desert endophyte Pseudomonas grandensis R4-79.	Alghanmi L, Elhady A, Parween S, Hirt H.	BMC Microbiol	10.1186/s12866-025-04431-4	2025
	Identification of novel aphid-killing bacteria to protect plants.	Paliwal D, Hamilton AJ, Barrett GA, Alberti F, van Emden H, Monteil CL, Mauchline TH, Nauen R, Wagstaff C, Bass C, Jackson RW.	Microb Biotechnol	10.1111/1751-7915.13902	2022
	Molecular Mechanisms of the Biological Control of Pine Wilt Disease Using Microorganisms.	Su X, Luo Y, Hu J, Xia Y, Liu M, Li Y, Wang H.	Microorganisms	10.3390/microorganisms13061215	2025
Enzymology	Nano-enhanced defense: Titanium-enriched Alginate-Bentonite coating augments Bacillus amyloliquefaciens D203 efficacy against Magnaporthe oryzae in Kenyan rice cultivation.	Mirara F, Dzidzienyo DK, Mwangi M.	Heliyon	10.1016/j.heliyon.2024.e36141	2024
	Unveiling the dynamic relationship of viruses and/or symbiotic bacteria with plant resilience in abiotic stress.	Sharma V, Mohammed SA, Devi N, Vats G, Tuli HS, Saini AK, Dhir YW, Dhir S, Singh B.	Stress Biol	10.1007/s44154-023-00126-w	2024
	Metabolism-linked methylotaxis sensors responsible for plant colonization in Methylobacterium aquaticum strain 22A.	Tani A, Masuda S, Fujitani Y, Iga T, Haruna Y, Kikuchi S, Shuaile W, Lv H, Katayama S, Yurimoto H, Sakai Y, Kato J.	Front Microbiol	10.3389/fmicb.2023.1258452	2023
Metabolism	Suppression of charcoal rot of chickpea by fluorescent Pseudomonas under saline stress condition.	Khare E, Singh S, Maheshwari DK, Arora NK.	Curr Microbiol	10.1007/s00284-011-9895-3	2011
Genetics	Fic Proteins Inhibit the Activity of Topoisomerase IV by AMPylation in Diverse Bacteria.	Lu CH, McCloskey A, Chen FR, Nakayasu ES, Zhang LQ, Luo ZQ.	Front Microbiol	10.3389/fmicb.2020.02084	2020
Metabolism	Histidine-Triad Hydrolases Provide Resistance to Peptide-Nucleotide Antibiotics.	Yagmurov E, Tsibulskaya D, Livenskyi A, Serebryakova M, Wolf YI, Borukhov S, Severinov K, Dubiley S.	mBio	10.1128/mbio.00497-20	2020
	Antibacterial effects of biologically active ingredients in hop provide promising options to fight infections by pathogens including multi-drug resistant bacteria.	Fahle A, Bereswill S, Heimesaat MM.	Eur J Microbiol Immunol (Bp)	10.1556/1886.2022.00006	2022
	Sequence and Structural Motifs Controlling the Broad Substrate Specificity of the Mycobacterial Hormone-Sensitive Lipase LipN.	Schemenauer DE, Pool EH, Raynor SN, Ruiz GP, Goehring LM, Koelper AJ, Wilson MA, Durand AJ, Kourtoglou EC, Larsen EM, Lavis LD, Esteb JJ, Hoops GC, Johnson RJ.	ACS Omega	10.1021/acsomega.3c00534	2023
Metabolism	The Rsm regulon of plant growth-promoting Pseudomonas fluorescens SS101: role of small RNAs in regulation of lipopeptide biosynthesis.	Song C, van der Voort M, van de Mortel J, Hassan KA, Elbourne LD, Paulsen IT, Loper JE, Raaijmakers JM.	Microb Biotechnol	10.1111/1751-7915.12190	2015
	Evaluation of antimycobacterial activity of Curcuma xanthorrhiza ethanolic extract against Mycobacterium tuberculosis H37Rv in vitro.	Ngadino, Setiawan, Koerniasari, Ernawati, Sudjarwo SA.	Vet World	10.14202/vetworld.2018.368-372	2018
	Interactions Between Bacillus Spp., Pseudomonas Spp. and Cannabis sativa Promote Plant Growth.	Comeau D, Balthazar C, Novinscak A, Bouhamdani N, Joly DL, Filion M.	Front Microbiol	10.3389/fmicb.2021.715758	2021
	Development and validation of a TaqMan RT-PCR method for identification of mayonnaise spoilage yeast Pichia kudriavzevii.	Syromyatnikov MY, Kiryanova SV, Popov VN.	AMB Express	10.1186/s13568-018-0716-y	2018
Enzymology	Protein profiles of bacteriophages of the family Myoviridae-like induced on M. haemolytica.	Urban-Chmiel R, Wernicki A, Wawrzykowski J, Puchalski A, Nowaczek A, Dec M, Stegierska D, Alomari MMM.	AMB Express	10.1186/s13568-018-0630-3	2018
Metabolism	Natural rice rhizospheric microbes suppress rice blast infections.	Spence C, Alff E, Johnson C, Ramos C, Donofrio N, Sundaresan V, Bais H.	BMC Plant Biol	10.1186/1471-2229-14-130	2014
Genetics	Structure-Aware Mycobacterium tuberculosis Functional Annotation Uncloaks Resistance, Metabolic, and Virulence Genes.	Modlin SJ, Elghraoui A, Gunasekaran D, Zlotnicki AM, Dillon NA, Dhillon N, Kuo N, Robinhold C, Chan CK, Baughn AD, Valafar F.	mSystems	10.1128/msystems.00673-21	2021
	Bacterial predator-prey coevolution accelerates genome evolution and selects on virulence-associated prey defences.	Nair RR, Vasse M, Wielgoss S, Sun L, Yu YN, Velicer GJ.	Nat Commun	10.1038/s41467-019-12140-6	2019
	Endophytic Bacteria Improve Plant Growth, Symbiotic Performance of Chickpea (Cicer arietinum L.) and Induce Suppression of Root Rot Caused by Fusarium solani under Salt Stress.	Egamberdieva D, Wirth SJ, Shurigin VV, Hashem A, Abd Allah EF.	Front Microbiol	10.3389/fmicb.2017.01887	2017
	Decomposing predation: testing for parameters that correlate with predatory performance by a social bacterium.	Mendes-Soares H, Velicer GJ.	Microb Ecol	10.1007/s00248-012-0135-6	2013
	Microfluidics and Metabolomics Reveal Symbiotic Bacterial-Fungal Interactions Between Mortierella elongata and Burkholderia Include Metabolite Exchange.	Uehling JK, Entler MR, Meredith HR, Millet LJ, Timm CM, Aufrecht JA, Bonito GM, Engle NL, Labbe JL, Doktycz MJ, Retterer ST, Spatafora JW, Stajich JE, Tschaplinski TJ, Vilgalys RJ.	Front Microbiol	10.3389/fmicb.2019.02163	2019
	Determination of histamine in milkfish stick implicated in food-borne poisoning.	Lee YC, Kung HF, Wu CH, Hsu HM, Chen HC, Huang TC, Tsai YH.	J Food Drug Anal	10.1016/j.jfda.2015.06.009	2016
Metabolism	Quorum Sensing in a Methane-Oxidizing Bacterium.	Puri AW, Schaefer AL, Fu Y, Beck DAC, Greenberg EP, Lidstrom ME.	J Bacteriol	10.1128/jb.00773-16	2017
	Trafficking of superinfecting Mycobacterium organisms into established granulomas occurs in mammals and is independent of the Erp and ESX-1 mycobacterial virulence loci.	Cosma CL, Humbert O, Sherman DR, Ramakrishnan L.	J Infect Dis	10.1086/593175	2008
Metabolism	Genus-wide physicochemical evidence of extracellular crystalline silver nanoparticles biosynthesis by Morganella spp.	Parikh RY, Ramanathan R, Coloe PJ, Bhargava SK, Patole MS, Shouche YS, Bansal V.	PLoS One	10.1371/journal.pone.0021401	2011
	Comparative analysis of myxococcus predation on soil bacteria.	Morgan AD, MacLean RC, Hillesland KL, Velicer GJ.	Appl Environ Microbiol	10.1128/aem.00414-10	2010
Genetics	Investigating the beneficial traits of Trichoderma hamatum GD12 for sustainable agriculture-insights from genomics.	Studholme DJ, Harris B, Le Cocq K, Winsbury R, Perera V, Ryder L, Ward JL, Beale MH, Thornton CR, Grant M.	Front Plant Sci	10.3389/fpls.2013.00258	2013
	Cr-resistant rhizo- and endophytic bacteria associated with Prosopis juliflora and their potential as phytoremediation enhancing agents in metal-degraded soils.	Khan MU, Sessitsch A, Harris M, Fatima K, Imran A, Arslan M, Shabir G, Khan QM, Afzal M.	Front Plant Sci	10.3389/fpls.2014.00755	2014
	Vulnerability of pathogenic biofilms to Micavibrio aeruginosavorus.	Kadouri D, Venzon NC, O'Toole GA.	Appl Environ Microbiol	10.1128/aem.01893-06	2007
	Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes.	Bohlin J, Skjerve E, Ussery DW.	BMC Genomics	10.1186/1471-2164-9-104	2008
	Cultivable gut bacteria provide a pathway for adaptation of Chrysolina herbacea to Mentha aquatica volatiles.	Pizzolante G, Cordero C, Tredici SM, Vergara D, Pontieri P, Del Giudice L, Capuzzo A, Rubiolo P, Kanchiswamy CN, Zebelo SA, Bicchi C, Maffei ME, Alifano P.	BMC Plant Biol	10.1186/s12870-017-0986-6	2017
Metabolism	Moraxella catarrhalis synthesizes an autotransporter that is an acid phosphatase.	Hoopman TC, Wang W, Brautigam CA, Sedillo JL, Reilly TJ, Hansen EJ.	J Bacteriol	10.1128/jb.01688-07	2008
Metabolism	Identification of gene products involved in the oxidative stress response of Moraxella catarrhalis.	Hoopman TC, Liu W, Joslin SN, Pybus C, Brautigam CA, Hansen EJ.	Infect Immun	10.1128/iai.01060-10	2011
Metabolism	Identification of the polyketide synthase involved in the biosynthesis of the surface-exposed lipooligosaccharides in mycobacteria.	Etienne G, Malaga W, Laval F, Lemassu A, Guilhot C, Daffe M.	J Bacteriol	10.1128/jb.01235-08	2009
Genetics	Comparative genome analysis of four magnetotactic bacteria reveals a complex set of group-specific genes implicated in magnetosome biomineralization and function.	Richter M, Kube M, Bazylinski DA, Lombardot T, Glockner FO, Reinhardt R, Schuler D.	J Bacteriol	10.1128/jb.00119-07	2007
	Biofilm formation by Moraxella catarrhalis in vitro: roles of the UspA1 adhesin and the Hag hemagglutinin.	Pearson MM, Laurence CA, Guinn SE, Hansen EJ.	Infect Immun	10.1128/iai.74.3.1588-1596.2006	2006
	Horizontal gene transfer in Histophilus somni and its role in the evolution of pathogenic strain 2336, as determined by comparative genomic analyses.	Siddaramappa S, Challacombe JF, Duncan AJ, Gillaspy AF, Carson M, Gipson J, Orvis J, Zaitshik J, Barnes G, Bruce D, Chertkov O, Detter JC, Han CS, Tapia R, Thompson LS, Dyer DW, Inzana TJ.	BMC Genomics	10.1186/1471-2164-12-570	2011
Genetics	Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium.	Frangeul L, Quillardet P, Castets AM, Humbert JF, Matthijs HC, Cortez D, Tolonen A, Zhang CC, Gribaldo S, Kehr JC, Zilliges Y, Ziemert N, Becker S, Talla E, Latifi A, Billault A, Lepelletier A, Dittmann E, Bouchier C, de Marsac NT.	BMC Genomics	10.1186/1471-2164-9-274	2008
	Comparative sequence analysis of the symbiosis island of Mesorhizobium loti strain R7A.	Sullivan JT, Trzebiatowski JR, Cruickshank RW, Gouzy J, Brown SD, Elliot RM, Fleetwood DJ, McCallum NG, Rossbach U, Stuart GS, Weaver JE, Webby RJ, De Bruijn FJ, Ronson CW.	J Bacteriol	10.1128/jb.184.11.3086-3095.2002	2002
Metabolism	Degradation of tetrahydrofurfuryl alcohol by Ralstonia eutropha is initiated by an inducible pyrroloquinoline quinone-dependent alcohol dehydrogenase.	Zarnt G, Schrader T, Andreesen JR.	Appl Environ Microbiol	10.1128/aem.63.12.4891-4898.1997	1997
Stress	Stress preadaptation and overexpression of rpoS and hfq genes increase stress resistance of Pseudomonas fluorescens ATCC13525.	Wu P, Wang Z, Zhu Q, Xie Z, Mei Y, Liang Y, Chen Z	Microbiol Res	10.1016/j.micres.2021.126804	2021
	Comparative Study of NAP-XPS and Cryo-XPS for the Investigation of Surface Chemistry of the Bacterial Cell-Envelope.	Kjaervik M, Ramstedt M, Schwibbert K, Dietrich PM, Unger WES	Front Chem	10.3389/fchem.2021.666161	2021
	Laurus nobilis, Salvia sclarea and Salvia officinalis Essential Oils and Hydrolates: Evaluation of Liquid and Vapor Phase Chemical Composition and Biological Activities.	Ovidi E, Laghezza Masci V, Zambelli M, Tiezzi A, Vitalini S, Garzoli S	Plants (Basel)	10.3390/plants10040707	2021
	Fast and Easy Phage-Tagging and Live/Dead Analysis for the Rapid Monitoring of Bacteriophage Infection.	Low HZ, Bohnlein C, Sprotte S, Wagner N, Fiedler G, Kabisch J, Franz CMAP	Front Microbiol	10.3389/fmicb.2020.602444	2020
	Determining the Different Mechanisms Used by Pseudomonas Species to Cope With Minimal Inhibitory Concentrations of Zinc via Comparative Transcriptomic Analyses.	Lei L, Chen J, Liao W, Liu P	Front Microbiol	10.3389/fmicb.2020.573857	2020
Genetics	Salt tolerance enhancement Of wheat (Triticum Asativium L) genotypes by selected plant growth promoting bacteria.	Fathalla A, Abd El-Mageed A	AIMS Microbiol	10.3934/microbiol.2020016	2020
Biotechnology	Modulation of Siderophore Production by Pseudomonas fluorescens Through the Manipulation of the Culture Medium Composition.	Vindeirinho JM, Soares HMVM, Soares EV	Appl Biochem Biotechnol	10.1007/s12010-020-03349-z	2020
Pathogenicity	Antimicrobial Activity and Proposed Action Mechanism of 3-Carene against Brochothrix thermosphacta and Pseudomonas fluorescens.	Shu H, Chen H, Wang X, Hu Y, Yun Y, Zhong Q, Chen W, Chen W	Molecules	10.3390/molecules24183246	2019
	Efficacy of olive leaf extract (Olea europaea L. cv Gentile di Larino) in marinated anchovies (Engraulis encrasicolus, L.) process.	Testa B, Lombardi SJ, Macciola E, Succi M, Tremonte P, Iorizzo M	Heliyon	10.1016/j.heliyon.2019.e01727	2019
	Bacterial conversion of depolymerized Kraft lignin.	Ravi K, Abdelaziz OY, Nobel M, Garcia-Hidalgo J, Gorwa-Grauslund MF, Hulteberg CP, Liden G	Biotechnol Biofuels	10.1186/s13068-019-1397-8	2019
Genetics	Draft Genome Sequence of the Industrially Significant Bacterium Pseudomonas fluorescens ATCC 13525.	Meier MJ, Subasinghe RM, Beaudette LA	Microbiol Resour Announc	10.1128/MRA.01368-18	2018
Genetics	Genome sequence of the novel virulent bacteriophage PMBT14 with lytic activity against Pseudomonas fluorescens DSM 50090(R).	Koberg S, Gieschler S, Brinks E, Wenning M, Neve H, Franz CMAP	Arch Virol	10.1007/s00705-018-3882-y	2018
Enzymology	Evolution under different storage conditions of anomalous blue coloration of Mozzarella cheese intentionally contaminated with a pigment-producing strain of Pseudomonas fluorescens.	Cenci-Goga BT, Karama M, Sechi P, Iulietto MF, Novelli S, Mattei S	J Dairy Sci	10.3168/jds.2014-8611	2014
Metabolism	Pseudomonas fluorescens ATCC 13525 containing an artificial oxalate operon and Vitreoscilla hemoglobin secretes oxalic acid and solubilizes rock phosphate in acidic alfisols.	Yadav K, Kumar C, Archana G, Naresh Kumar G	PLoS One	10.1371/journal.pone.0092400	2014
Metabolism	Zinc toxicity and ATP production in Pseudomonas fluorescens.	Alhasawi A, Auger C, Appanna VP, Chahma M, Appanna VD	J Appl Microbiol	10.1111/jam.12497	2014
Pathogenicity	Effect of bacterial cell-free supernatants on infectivity of norovirus surrogates.	Shearer AE, Hoover DG, Kniel KE	J Food Prot	10.4315/0362-028X.JFP-13-204	2014
Metabolism	Conserved and non-conserved residues and their role in the structure and function of p-hydroxybenzoate hydroxylase.	Suemori A	Protein Eng Des Sel	10.1093/protein/gzt026	2013
	First Report of Stewart's Wilt of Maize in Argentina Caused by Pantoea stewartii.	Orio AGA, Brucher E, Plazas MC, Sayago P, Guerra F, De Rossi R, Ducasse DA, Guerra GD	Plant Dis	10.1094/PDIS-07-12-0668-PDN	2012
	Iron-regulated metabolites produced by Pseudomonas fluorescens WCS374r are not required for eliciting induced systemic resistance against Pseudomonas syringae pv. tomato in Arabidopsis.	Djavaheri M, Mercado-Blanco J, Versluis C, Meyer JM, Loon LC, Bakker PA	Microbiologyopen	10.1002/mbo3.32	2012
Stress	Disturbance promotes non-indigenous bacterial invasion in soil microcosms: analysis of the roles of resource availability and community structure.	Liu M, Bjornlund L, Ronn R, Christensen S, Ekelund F	PLoS One	10.1371/journal.pone.0045306	2012
Cultivation	Proposal for a method to estimate nutrient shock effects in bacteria.	Azevedo NF, Braganca SM, Simoes LC, Cerqueira L, Almeida C, Keevil CW, Vieira MJ	BMC Res Notes	10.1186/1756-0500-5-422	2012
Enzymology	Development and validation of a real-time TaqMan assay for the detection and enumeration of Pseudomonas fluorescens ATCC 13525 used as a challenge organism in testing of food equipments.	Saha R, Bestervelt LL, Donofrio RS	J Food Sci	10.1111/j.1750-3841.2011.02547.x	2012
Metabolism	Exploring the limits of robust detection of incorporation of 13C by mass spectrometry in protein-based stable isotope probing (protein-SIP).	Taubert M, Baumann S, von Bergen M, Seifert J	Anal Bioanal Chem	10.1007/s00216-011-5289-4	2011
Metabolism	Protozoan growth rates on secondary-metabolite-producing Pseudomonas spp. correlate with high-level protozoan taxonomy.	Pedersen AL, Winding A, Altenburger A, Ekelund F	FEMS Microbiol Lett	10.1111/j.1574-6968.2010.02182.x	2011
Metabolism	Rhizospheric bacteria alleviate salt-produced stress in sunflower.	Shilev S, Sancho ED, Benlloch-Gonzalez M	J Environ Manage	10.1016/j.jenvman.2010.07.019	2010
Pathogenicity	[Antimicrobial efficacy of benzyl isothiocyanate].	Kamii E, Isshiki K	Shokuhin Eiseigaku Zasshi	10.3358/shokueishi.50.311	2009
Metabolism	Heterologous expression of phosphoenolpyruvate carboxylase enhances the phosphate solubilizing ability of fluorescent pseudomonads by altering the glucose catabolism to improve biomass yield.	Buch A, Archana G, Naresh Kumar G	Bioresour Technol	10.1016/j.biortech.2009.08.075	2009
Metabolism	Enhanced citric acid biosynthesis in Pseudomonas fluorescens ATCC 13525 by overexpression of the Escherichia coli citrate synthase gene.	Buch AD, Archana G, Kumar GN	Microbiology (Reading)	10.1099/mic.0.028878-0	2009
	Bacterial feeders, the nematode Caenorhabditis elegans and the flagellate Cercomonas longicauda, have different effects on outcome of competition among the Pseudomonas biocontrol strains CHA0 and DSS73.	Pedersen AL, Nybroe O, Winding A, Ekelund F, Bjornlund L	Microb Ecol	10.1007/s00248-008-9455-y	2008
Metabolism	Genomic, genetic and structural analysis of pyoverdine-mediated iron acquisition in the plant growth-promoting bacterium Pseudomonas fluorescens SBW25.	Moon CD, Zhang XX, Matthijs S, Schafer M, Budzikiewicz H, Rainey PB	BMC Microbiol	10.1186/1471-2180-8-7	2008
Pathogenicity	Enamines as novel antibacterials and their structure-activity relationships.	Xiao ZP, Fang RQ, Li HQ, Xue JY, Zheng Y, Zhu HL	Eur J Med Chem	10.1016/j.ejmech.2007.11.026	2007
Pathogenicity	The effects of a biocide and a surfactant on the detachment of Pseudomonas fluorescens from glass surfaces.	Simoes M, Simoes LC, Cleto S, Pereira MO, Vieira MJ	Int J Food Microbiol	10.1016/j.ijfoodmicro.2007.11.041	2007
Pathogenicity	Pseudomonas fluorescens' view of the periodic table.	Workentine ML, Harrison JJ, Stenroos PU, Ceri H, Turner RJ	Environ Microbiol	10.1111/j.1462-2920.2007.01448.x	2007
Metabolism	The role of hydrodynamic stress on the phenotypic characteristics of single and binary biofilms of Pseudomonas fluorescens.	Simoes M, Pereira MO, Vieira MJ	Water Sci Technol	10.2166/wst.2007.288	2007
	Synthesis, structure, and structure-activity relationship analysis of enamines as potential antibacterials.	Xiao ZP, Xue JY, Tan SH, Li HQ, Zhu HL	Bioorg Med Chem	10.1016/j.bmc.2007.03.060	2007
	A novel method for the study of the biophysical interface in soils using nano-scale secondary ion mass spectrometry.	Herrmann AM, Clode PL, Fletcher IR, Nunan N, Stockdale EA, O'Donnell AG, Murphy DV	Rapid Commun Mass Spectrom	10.1002/rcm.2811	2007
Metabolism	Effect of carbon source on pyrimidine formation in Pseudomonas fluorescens ATCC 13525.	West TP	Microbiol Res	10.1016/j.micres.2005.02.006	2005
Pathogenicity	[Structural characteristics and biological properties of Pseudomonas fluorescens lipopolysaccharides].	Veremecheinko SN, Vodianik MA, Zdorovenko GM	Prikl Biokhim Mikrobiol		2005
Enzymology	Identification of Pseudomonas proteins coordinately induced by acidic amino acids and their amides: a two-dimensional electrophoresis study.	Sonawane A, Kloppner U, Hovel S, Volker U, Rohm KH	Microbiology (Reading)	10.1099/mic.0.26454-0	2003
Enzymology	Optimisation of a microbial bioassay for contaminated soil monitoring: bacterial inoculum standardisation and comparison with Microtox assay.	Abbondanzi F, Cachada A, Campisi T, Guerra R, Raccagni M, Iacondini A	Chemosphere	10.1016/s0045-6535(03)00717-3	2003
Metabolism	Solubilization of inorganic phosphate and plant growth promotion by cold tolerant mutants of Pseudomonasfluorescens.	Katiyar V, Goel R	Microbiol Res	10.1078/0944-5013-00188	2003
Metabolism	A new microbial assay for the toxicity detection of contaminated soils.	Guerra R, Iacondini A, Abbondanzi F, Matteucci C, Bruzzi L	Ann Chim		2002
Metabolism	Degradation of natural phosphorylated compounds and added polyphosphates in milk by Pseudomonas fluorescens CECT378, Lactococcus lactis CECT539, and Kluyveromyces marxianus CECT10584.	Belloque J, Carrascosa AV	J Food Prot	10.4315/0362-028x-65.7.1179	2002
Metabolism	[Comparative characteristics of lipopolysaccharides of various Pseudomonas fluorescens strains (Biovar I)].	Zdorovenko GM, Veremeichenko SN	Mikrobiologiia		2001
Metabolism	Changes in phosphoglyceride composition during storage of ultrahigh-temperature milk, as assessed by 31P-nuclear magnetic resonance: possible involvement of thermoresistant microbial enzymes.	Belloque J, Carrascosa AV, Lopez-Fandino R	J Food Prot	10.4315/0362-028x-64.6.850	2001
Genetics	Cadmium-regulated gene fusions in Pseudomonas fluorescens.	Rossbach S, Kukuk ML, Wilson TL, Feng SF, Pearson MM, Fisher MA	Environ Microbiol	10.1046/j.1462-2920.2000.00117.x	2000
Metabolism	Degradation of triphenyltin by a fluorescent pseudomonad.	Inoue H, Takimura O, Fuse H, Murakami K, Kamimura K, Yamaoka Y	Appl Environ Microbiol	10.1128/AEM.66.8.3492-3498.2000	2000
Enzymology	[Characteristics of lipopolysaccharide from Pseudomonas fluorescens (biovar I)].	Zdorovenko GM, Gvozdiak RI, Gubanova NIa, Afonina GB, Zdorovenko EL	Mikrobiologiia		1999
Metabolism	Siderotyping of fluorescent pseudomonads: characterization of pyoverdines of Pseudomonas fluorescens and Pseudomonas putida strains from Antarctica.	Meyer JM, Stintzi A, Coulanges V, Shivaji S, Voss JA, Taraz K, Budzikiewic H	Microbiology (Reading)	10.1099/00221287-144-11-3119	1998
Pathogenicity	[Effect of water pollution by oil and oil products on barrier functions of bacterial cell cytoplasmic membranes].	Fomchenkov VM, Kholodenko VP, Irkhina IA, Petrunina TA	Mikrobiologiia		1998
Pathogenicity	Bacterial leakage in endodontics: an improved method for quantification.	Michailesco PM, Valcarcel J, Grieve AR, Levallois B, Lerner D	J Endod	10.1016/S0099-2399(96)80013-6	1996
Biotechnology	Aluminum Elicits Exocellular Phosphatidylethanolamine Production in Pseudomonas fluorescens.	Appanna VD, Pierre MS	Appl Environ Microbiol	10.1128/aem.62.8.2778-2782.1996	1996
Genetics	[Characteristics of Pseudomonas fluorescens lipopolysaccharide].	Veremeichenko SN, Zdorovenko GM	Mikrobiologiia		1994
	Impaction onto a Glass Slide or Agar versus Impingement into a Liquid for the Collection and Recovery of Airborne Microorganisms.	Juozaitis A, Willeke K, Grinshpun SA, Donnelly J	Appl Environ Microbiol	10.1128/aem.60.3.861-870.1994	1994
Metabolism	Effects of Mn2+ and Mg2+ on assimilation of NO3- and NH4+ by soil microorganisms.	McCarty GW, Bremner JM	Proc Natl Acad Sci U S A	10.1073/pnas.90.20.9403	1993
Enzymology	Cloning, nucleotide sequence, and expression of a p-hydroxybenzoate hydroxylase isozyme gene from Pseudomonas fluorescens.	Shuman B, Dix TA	J Biol Chem	S0021-9258(19)85301-2	1993
	Comparison of Resistance to Microbial Contamination of Conventional and Modified Water Dispensers.	Eckner KF	J Food Prot	10.4315/0362-028X-55.8.627	1992
Metabolism	Gallium toxicity and adaptation in Pseudomonas fluorescens.	al-Aoukaty A, Appanna VD, Falter H	FEMS Microbiol Lett	10.1016/0378-1097(92)90720-9	1992
Metabolism	Exocellular and intracellular accumulation of lead in Pseudomonas fluorescens ATCC 13525 is mediated by the phosphate content of the growth medium.	al-Aoukaty A, Appanna VD, Huang J	FEMS Microbiol Lett	10.1016/0378-1097(91)90490-2	1991
Metabolism	A time-resolved fluorescence study of azurin and metalloazurin derivatives.	Hutnik CM, Szabo AG	Biochemistry	10.1021/bi00435a046	1989
Metabolism	Confirmation that multiexponential fluorescence decay behavior of holoazurin originates from conformational heterogeneity.	Hutnik CM, Szabo AG	Biochemistry	10.1021/bi00435a045	1989
	[Fatty acid composition of lipid A in Pseudomonas fluorescens].	Veremeichenko SN, Zdorovenko GM, Zakharova IIa	Mikrobiologiia		1989
Enzymology	Ferripyoverdine-reductase activity in Pseudomonas fluorescens.	Halle F, Meyer JM	Biol Met	10.1007/BF01116196	1989
Metabolism	Specificity of pyoverdine-mediated iron uptake among fluorescent Pseudomonas strains.	Hohnadel D, Meyer JM	J Bacteriol	10.1128/jb.170.10.4865-4873.1988	1988
Phylogeny	[Molecular DNA-DNA hybridization in Pseudomonas fluorescens and Pseudomonas putida].	Kiprianova EA, Levanova GF, Shvetsov IuP, Garagulia AD	Mikrobiologiia		1983
Stress	Effect of surface shear stress on the attachment of Pseudomonas fluorescens to stainless steel under defined flow conditions.	Duddridge JE, Kent CA, Laws JF	Biotechnol Bioeng	10.1002/bit.260240113	1982
Metabolism	Glucose uptake and phosphorylation in Pseudomonas fluorescens.	Eisenberg RC, Butters SJ, Quay SC, Friedman SB	J Bacteriol	10.1128/jb.120.1.147-153.1974	1974
Biotechnology	Rapid detection and discrimination of food-related bacteria using IR-microspectroscopy in combination with multivariate statistical analysis.	Klein D, Breuch R, Reinmuller J, Engelhard C, Kaul P	Talanta	10.1016/j.talanta.2021.122424	2021
Enzymology	Detection of spoilage associated bacteria using Raman-microspectroscopy combined with multivariate statistical analysis.	Klein D, Breuch R, von der Mark S, Wickleder C, Kaul P	Talanta	10.1016/j.talanta.2018.12.094	2018
	Plant growth promotion of the forage plant Lupinus albus Var. Orden Dorado using Pseudomonas agronomica sp. nov. and Bacillus pretiosus sp. nov. added over a valorized agricultural biowaste.	Robas Mora M, Fernandez Pastrana VM, Oliva LLG, Lobo AP, Jimenez Gomez PA.	Front Microbiol	10.3389/fmicb.2022.1046201	2022
Genetics	Agronomic efficiency and genome mining analysis of the wheat-biostimulant rhizospheric bacterium Pseudomonas pergaminensis sp. nov. strain 1008^T.	Diaz M, Bach T, Gonzalez Anta G, Agaras B, Wibberg D, Noguera F, Canciani W, Valverde C.	Front Plant Sci	10.3389/fpls.2022.894985	2022

References

#12634	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50090
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#22941	RUDOLPH HUGH, LEONARD GUARRAIA, HAROLD HATT: The proposed neotype strains of Pseudomonas fluorescens (Trevisan) Migula 1895. IJSEM 14: 145 - 156 1964 ( DOI 10.1099/0096266X-14-4-145 )
#22942	J. M. YOUNG: Nomenclatural Status of Pseudomonas barkeri (Berridge 1924) Dowson 1943 and Pseudomonas washingtoniae (Pine 1943) Elliott 1951. IJSEM 27: 300 - 303 1977 ( DOI 10.1099/00207713-27-3-300 )
#42191	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#119411	Collection of Institut Pasteur ; Curators of the CIP; CIP 69.13
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Pseudomonas fluorescens (DSM 50090, ATCC 13525, ICPB 3200)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Antibiotic susceptibility testing

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API 20NE

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900475215

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media